Citrus Sinensis ID: 002051
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 975 | 2.2.26 [Sep-21-2011] | |||||||
| O48963 | 996 | Phototropin-1 OS=Arabidop | yes | no | 0.976 | 0.955 | 0.707 | 0.0 | |
| Q2QYY8 | 921 | Phototropin-1A OS=Oryza s | yes | no | 0.897 | 0.950 | 0.611 | 0.0 | |
| Q2RBR1 | 921 | Phototropin-1B OS=Oryza s | yes | no | 0.897 | 0.950 | 0.610 | 0.0 | |
| P93025 | 915 | Phototropin-2 OS=Arabidop | no | no | 0.813 | 0.866 | 0.603 | 0.0 | |
| Q9ST27 | 907 | Phototropin-2 OS=Oryza sa | no | no | 0.785 | 0.844 | 0.625 | 0.0 | |
| Q0DCT8 | 589 | Protein kinase G11A OS=Or | no | no | 0.361 | 0.597 | 0.393 | 2e-78 | |
| A2YBX5 | 589 | Protein kinase G11A OS=Or | N/A | no | 0.361 | 0.597 | 0.393 | 2e-78 | |
| Q9LFA2 | 934 | Serine/threonine-protein | no | no | 0.311 | 0.325 | 0.407 | 4e-78 | |
| P15792 | 609 | Protein kinase PVPK-1 OS= | N/A | no | 0.311 | 0.499 | 0.407 | 4e-77 | |
| Q05999 | 578 | Serine/threonine-protein | no | no | 0.315 | 0.532 | 0.398 | 7e-73 |
| >sp|O48963|PHOT1_ARATH Phototropin-1 OS=Arabidopsis thaliana GN=PHOT1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1397 bits (3616), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 717/1014 (70%), Positives = 812/1014 (80%), Gaps = 62/1014 (6%)
Query: 5 EKSPKQSSKACESPLSRDSRGSLEVFNPSTFSTRPTNPVFRPQP-TWQTWMEQRES---P 60
E + K S+K L RD+RGSLEVFNPST TRP NPVFRP+P WQ + R + P
Sbjct: 2 EPTEKPSTKPSSRTLPRDTRGSLEVFNPSTQLTRPDNPVFRPEPPAWQNLSDPRGTSPQP 61
Query: 61 EPEHAKLNSKSSRAEE----ITSWMALKDPAPQKPSLPPLIQKMTNDQEKSTVTKQLSGE 116
P+ S R+++ TSWMALKDP+P+ S +K+ ++
Sbjct: 62 RPQQEPAPSNPVRSDQEIAVTTSWMALKDPSPETIS------------KKTITAEKPQKS 109
Query: 117 AGAAAQRAAEWGLVLKTDTETGKPQAVVARTSGG--DDPNGKPGTSRRNSNNSVRSSGEM 174
A AA QRAAEWGLVLKTDT+TGKPQ V R SGG +DPNGK TS+RNS NS RSSGEM
Sbjct: 110 AVAAEQRAAEWGLVLKTDTKTGKPQGVGVRNSGGTENDPNGKKTTSQRNSQNSCRSSGEM 169
Query: 175 SDEG--GKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEV 232
SD G G+PRVS+ +KDALSTFQQTFVVSDATKPDYPIMYASAGFF MTGYTSKEV
Sbjct: 170 SDGDVPGGRSGIPRVSEDLKDALSTFQQTFVVSDATKPDYPIMYASAGFFNMTGYTSKEV 229
Query: 233 VGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGK 292
VGRNCRFLQG+GTD +++AKIRETL G +YCGR+LNYKKDGT FWNLLTIAPIKD+ GK
Sbjct: 230 VGRNCRFLQGSGTDADELAKIRETLAAGNNYCGRILNYKKDGTSFWNLLTIAPIKDESGK 289
Query: 293 VLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRSL 352
VLKFIGMQVEVSKHTEGAK+K LRPNGLPESLIRYDARQK+MAT+SVTELV+A+K+PR+L
Sbjct: 290 VLKFIGMQVEVSKHTEGAKEKALRPNGLPESLIRYDARQKDMATNSVTELVEAVKRPRAL 349
Query: 353 SESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKK 412
SESTN P + KSE +E RR SENV P R + GGG R SMQRI+E+PEKK
Sbjct: 350 SESTNLHPFMTKSES---DELPKKPARRMSENVVPSGRRNSGGGRRNSMQRINEIPEKKS 406
Query: 413 QKSGRRSFMGLIGRKSQSTDDHDSFENEIIMEG--DDDYESDDERPDSVDDKVRQKEMRK 470
+KS SFMG I +KS+S D+ S ++ I G DD+ DERP+SVDDKVRQKEMRK
Sbjct: 407 RKSSL-SFMG-IKKKSESLDE--SIDDGFIEYGEEDDEISDRDERPESVDDKVRQKEMRK 462
Query: 471 GIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDP 530
GIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETD
Sbjct: 463 GIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDL 522
Query: 531 ATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHL 590
TV+KIR AIDNQT+VTVQLINYTKSGKKFWN+FHLQPMRDQKGEVQYFIGVQLDGS+H+
Sbjct: 523 TTVKKIRNAIDNQTEVTVQLINYTKSGKKFWNIFHLQPMRDQKGEVQYFIGVQLDGSKHV 582
Query: 591 EPLRNSIPEATAEESEKLVKQTAENVNEAVKELPDANLTPEDLWANHSKVVHPKPHRKDS 650
EP+RN I E +E E LVK+TA N++EAV+ELPDAN+TPEDLWANHSKVVH KPHRKDS
Sbjct: 583 EPVRNVIEETAVKEGEDLVKKTAVNIDEAVRELPDANMTPEDLWANHSKVVHCKPHRKDS 642
Query: 651 PPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR 710
PPW AIQK+L+SGE I L+HF+P+KPLGSGDTGSVHLVEL G+ Q FAMKAMDK VMLNR
Sbjct: 643 PPWIAIQKVLESGEPIGLKHFKPVKPLGSGDTGSVHLVELVGTDQLFAMKAMDKAVMLNR 702
Query: 711 NK---------------------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKE 743
NK TKTH+CLITDY PGGELF+LLDRQP KVLKE
Sbjct: 703 NKVHRARAEREILDLLDHPFLPALYASFQTKTHICLITDYYPGGELFMLLDRQPRKVLKE 762
Query: 744 DAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803
DAVRFYAA+VVVALEYLHCQGIIYRDLKPENVL+QGNG +SL+DFDLSCLTSCKPQLL+P
Sbjct: 763 DAVRFYAAQVVVALEYLHCQGIIYRDLKPENVLIQGNGDISLSDFDLSCLTSCKPQLLIP 822
Query: 804 TTNE--KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 861
+ +E KK++ K QQ P+FMAEPMRASNSFVGTEEYIAPEII+GAGHTSAVDWWALGIL+
Sbjct: 823 SIDEKKKKKQQKSQQTPIFMAEPMRASNSFVGTEEYIAPEIISGAGHTSAVDWWALGILM 882
Query: 862 YEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 921
YEMLYGYTPFRGKTRQKTF N+L KDLKFP+S P SL KQL++RLL RDPK RLG EG
Sbjct: 883 YEMLYGYTPFRGKTRQKTFTNVLQKDLKFPASIPASLQVKQLIFRLLQRDPKKRLGCFEG 942
Query: 922 ANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDTEKEYKVVDPGMQDLQQNVF 975
ANE+K+H FFKG+NWAL+RC NPPEL+ P+F+ + E KVVDP ++DLQ NVF
Sbjct: 943 ANEVKQHSFFKGINWALIRCTNPPELETPIFSGEAENGEKVVDPELEDLQTNVF 996
|
Protein kinase that acts as a blue-light photoreceptor in a signal-transduction pathway for photo-induced movements. Required for blue-light mediated mRNA destabilization. Mediates calcium spiking of extracellular origin in response to low rate of blue light. Mediates also rapid membrane depolarization and growth inhibition in response to blue light. Necessary for root phototropism. Involved in hypocotyl phototropism under low rate but not under high rate blue light. Contributes to the chloroplast accumulation but seems to be not required for chloroplast translocation. Regulates stomata opening and photomorphogenesis response of leaf tissue. Confers sensitivity to drought. Not involved in hypocotyl elongation inhibition, anthocyanin accumulation or cotyledon opening. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q2QYY8|PHT1A_ORYSJ Phototropin-1A OS=Oryza sativa subsp. japonica GN=PHOT1A PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1195 bits (3092), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/998 (61%), Positives = 731/998 (73%), Gaps = 123/998 (12%)
Query: 5 EKSPKQSSKACESPLSRDSRGSLEVFNPSTFSTRPTNPVFRPQPTWQTWMEQRESPEPEH 64
E+ +Q + + P RDSRGSLEVFNPS+ S+ FR
Sbjct: 14 ERKEQQQQRGYQLP--RDSRGSLEVFNPSSASS------FR------------------- 46
Query: 65 AKLNSKSSRAEEITSWMALKDPAPQKPSLPPLIQKMTNDQEKSTVTKQLSGEAGAAAQRA 124
+ ++ + + ++A+ D+E+ V Q QRA
Sbjct: 47 ----TAAAAPKSASPFLAIP------------------DREEDNVVAQ---------QRA 75
Query: 125 AEWGLVLKTDTETGKPQAVVARTSGGDDPNGKPGTSRRNSNNSVRSSGEMSDEGGKE-KG 183
AEWGLVL+TD TG PQ V AR S G S R+S E + + +
Sbjct: 76 AEWGLVLQTDHHTGLPQGVSARPSSG----------------SARTSSEDNPQQQQSAAA 119
Query: 184 LPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGA 243
+PRVS+ ++ ALS FQQTFVVSDAT P++PIMYASAGFF MTGYTSKEVVGRNCRFLQG+
Sbjct: 120 IPRVSEELRAALSAFQQTFVVSDATHPNHPIMYASAGFFNMTGYTSKEVVGRNCRFLQGS 179
Query: 244 GTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEV 303
GTDP ++ KIR++L NG +YCGR+LNYKKDGTPFWNLLTIAPIKD++G++LKFIGMQVEV
Sbjct: 180 GTDPHEIDKIRQSLANGSNYCGRILNYKKDGTPFWNLLTIAPIKDEDGRLLKFIGMQVEV 239
Query: 304 SKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRSLSESTNRPPIIR 363
SK+TEG KD ++RPNGL ESLI+YDARQK+ A SSV+EL+ A+K PRSLSES+N + R
Sbjct: 240 SKYTEGKKDTVVRPNGLSESLIKYDARQKDHARSSVSELLLALKNPRSLSESSNN-TLKR 298
Query: 364 KSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEK--KKQKSGRRSFM 421
KS+ + +R SE+ RRNS G R+S+Q+I+EVP++ + +KSG R+FM
Sbjct: 299 KSQESLSMSMTEVPSKRSSES--GSRRNSR-SGTRSSLQKINEVPDQGNRTRKSGLRAFM 355
Query: 422 GLIGRKSQSTDDHDSFENEIIMEGDDD--YESDDERPDSVDDKVRQKEMRKGIDLATTLE 479
G +G H S E ++ D+D +SDDERP+S +D+ R+KEMR+GIDLATTLE
Sbjct: 356 GFLGM------GHGSVEKNMLKPRDEDPLIDSDDERPESFEDEFRRKEMRRGIDLATTLE 409
Query: 480 RIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAA 539
RIEKNFVITDPRLPDNPIIFASDSFL+LTEY+REEILGRNCRFLQGPETD ATVRKIR A
Sbjct: 410 RIEKNFVITDPRLPDNPIIFASDSFLQLTEYNREEILGRNCRFLQGPETDRATVRKIRDA 469
Query: 540 IDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPE 599
IDNQ +VTVQLINYTKSGKKFWNLFHLQPMRDQKG+VQYFIGVQLDG+EH++ +
Sbjct: 470 IDNQAEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVQ-------D 522
Query: 600 ATAEESEKLVKQTAENVNEAVKELPDANLTPEDLWANHSKVVHPKPHRKDSPPWKAIQKI 659
A+E LVK+TA+N++EA KELPDANL PEDLWANHSKVV P PH KD+ W+AIQK+
Sbjct: 523 DAAKEGVVLVKKTADNIDEAAKELPDANLRPEDLWANHSKVVLPNPHMKDTASWRAIQKV 582
Query: 660 LDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK------- 712
L+SGE I L+HFRP+KPLGSGDTGSVHLVEL +G+YFAMKAMDK +MLNRNK
Sbjct: 583 LESGESIGLKHFRPVKPLGSGDTGSVHLVELLNTGEYFAMKAMDKSIMLNRNKVHRATAE 642
Query: 713 --------------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAE 752
TKTH+CLITDYCPGGELF+LLD QP KVL EDAVRFYAAE
Sbjct: 643 RQILDLLDHPFLPTLYASFQTKTHICLITDYCPGGELFVLLDNQPLKVLHEDAVRFYAAE 702
Query: 753 VVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRH 812
VVVALEYLHCQGIIYRDLKPEN+LL +GH+SLTDFDLSCLTSC+PQ+ LP ++K+
Sbjct: 703 VVVALEYLHCQGIIYRDLKPENILLHRDGHISLTDFDLSCLTSCRPQVFLPEDADEKKGR 762
Query: 813 KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 872
K P+F AEPMRASNSFVGTEEYIAPEII GAGHTSAVDWWALGILLYEMLYGYTPFR
Sbjct: 763 KNGSYPIFFAEPMRASNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFR 822
Query: 873 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
GKTRQ+TFANILHKD++FP+S SL A+QLMYRLLHRDP +RLGS+EGANEIK HPFF+
Sbjct: 823 GKTRQRTFANILHKDIRFPASISVSLAARQLMYRLLHRDPANRLGSYEGANEIKGHPFFR 882
Query: 933 GVNWALVRCMNPPELDAPLFATDTEKEYKVVDPGMQDL 970
G+NW L+R PP+L+ PLF+ D ++ +V D+
Sbjct: 883 GINWPLIRATAPPKLEIPLFSKDDMEKKGLVTNNRTDM 920
|
Protein kinase that acts as a blue-light photoreceptor in a signal-transduction pathway for phototropic responses. Regulates a wide range of physiological activities in plants that maximize the efficiency of photosynthesis, such as chloroplast relocations, stomata opening, and leaf expansion. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q2RBR1|PHT1B_ORYSJ Phototropin-1B OS=Oryza sativa subsp. japonica GN=PHOT1B PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1195 bits (3091), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/998 (61%), Positives = 732/998 (73%), Gaps = 123/998 (12%)
Query: 5 EKSPKQSSKACESPLSRDSRGSLEVFNPSTFSTRPTNPVFRPQPTWQTWMEQRESPEPEH 64
E+ +Q + + P RDSRGSLEVFNPS+ S+ FR
Sbjct: 14 ERKEQQQQRGYQLP--RDSRGSLEVFNPSSASS------FR------------------- 46
Query: 65 AKLNSKSSRAEEITSWMALKDPAPQKPSLPPLIQKMTNDQEKSTVTKQLSGEAGAAAQRA 124
+ ++ + + ++A+ D+E+ V Q QRA
Sbjct: 47 ----TAAAAPKSASPFLAIP------------------DREEDNVVAQ---------QRA 75
Query: 125 AEWGLVLKTDTETGKPQAVVARTSGGDDPNGKPGTSRRNSNNSVRSSGEMSDEGGKE-KG 183
AEWGLVL+TD TG PQ V AR S G S R+S E + + +
Sbjct: 76 AEWGLVLQTDHHTGLPQGVSARPSSG----------------SARTSSEDNPQQQQSAAA 119
Query: 184 LPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGA 243
+PRVS+ ++ ALS FQQTFVVSDAT P++PIMYASAGFF MTGYTSKEVVGRNCRFLQG+
Sbjct: 120 IPRVSEELRAALSVFQQTFVVSDATHPNHPIMYASAGFFNMTGYTSKEVVGRNCRFLQGS 179
Query: 244 GTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEV 303
GTDP ++ KIR++L NG +YCGR+LNYKKDGTPFWNLLTIAPIKD++G++LKFIGMQVEV
Sbjct: 180 GTDPHEIDKIRQSLANGSNYCGRILNYKKDGTPFWNLLTIAPIKDEDGRLLKFIGMQVEV 239
Query: 304 SKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRSLSESTNRPPIIR 363
SK+TEG KD ++RPNGL ESLI+YDARQK+ A SSV+EL+ A+K PRSLSES+N + R
Sbjct: 240 SKYTEGKKDTVVRPNGLSESLIKYDARQKDHARSSVSELLLALKNPRSLSESSNN-TLKR 298
Query: 364 KSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEK--KKQKSGRRSFM 421
KS+ + + +R SE+ RRNS G R+S+Q+I+EVP++ + +KSG R+FM
Sbjct: 299 KSQESLSMSMSEVPSKRSSES--GSRRNSR-SGTRSSLQKINEVPDQVNRTRKSGLRAFM 355
Query: 422 GLIGRKSQSTDDHDSFENEIIMEGDDD--YESDDERPDSVDDKVRQKEMRKGIDLATTLE 479
G +G H S E ++ D+D +SDDERP+S +D+ R+KEMR+GIDLATTLE
Sbjct: 356 GFLGM------GHGSVEKNMLKPRDEDPLIDSDDERPESFEDEFRRKEMRRGIDLATTLE 409
Query: 480 RIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAA 539
RIEKNFVITDPRLPDNPIIFASDSFL+LTEY+REEILGRNCRFLQGPETD ATVRKIR A
Sbjct: 410 RIEKNFVITDPRLPDNPIIFASDSFLQLTEYNREEILGRNCRFLQGPETDRATVRKIRDA 469
Query: 540 IDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPE 599
IDNQ +VTVQLINYTKSGKKFWNLFHLQPMRDQKG+VQYFIGVQLDG+EH++ +
Sbjct: 470 IDNQAEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVQ-------D 522
Query: 600 ATAEESEKLVKQTAENVNEAVKELPDANLTPEDLWANHSKVVHPKPHRKDSPPWKAIQKI 659
A+E LVK+TA+N++EA KELPDANL P+DLWANHSKVV P PH KD+ W+AIQK+
Sbjct: 523 DAAKEGVVLVKKTADNIDEAAKELPDANLRPKDLWANHSKVVLPNPHMKDTASWRAIQKV 582
Query: 660 LDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK------- 712
L+SGE I L+HFRP+KPLGSGDTGSVHLVEL +G+YFAMKAMDK +MLNRNK
Sbjct: 583 LESGESIGLKHFRPVKPLGSGDTGSVHLVELLNTGEYFAMKAMDKSIMLNRNKVHRATAE 642
Query: 713 --------------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAE 752
TKTH+CLITDYCPGGELF+LLD QP KVL EDAVRFYAAE
Sbjct: 643 RQILDLLDHPFLPTLYASFQTKTHICLITDYCPGGELFVLLDNQPLKVLHEDAVRFYAAE 702
Query: 753 VVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRH 812
VVVALEYLHCQGIIYRDLKPEN+LL +GH+SLTDFDLSCLTSC+PQ+ LP ++K+
Sbjct: 703 VVVALEYLHCQGIIYRDLKPENILLHRDGHISLTDFDLSCLTSCRPQVFLPEDADEKKGR 762
Query: 813 KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 872
K P+F AEPMRASNSFVGTEEYIAPEII GAGHTSAVDWWALGILLYEMLYGYTPFR
Sbjct: 763 KNGSYPIFFAEPMRASNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFR 822
Query: 873 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
GKTRQ+TFANILHKD++FP+S SL A+QLMYRLLHRDP +RLGS+EGANEIK HPFF+
Sbjct: 823 GKTRQRTFANILHKDIRFPASISVSLAARQLMYRLLHRDPANRLGSYEGANEIKGHPFFR 882
Query: 933 GVNWALVRCMNPPELDAPLFATDTEKEYKVVDPGMQDL 970
G+NW L+R PP+L+ PLF+ D ++ +V D+
Sbjct: 883 GINWPLIRATAPPKLEIPLFSKDDMEKKGLVTNNRTDM 920
|
Protein kinase that acts as a blue-light photoreceptor in a signal-transduction pathway for phototropic responses. Regulates a wide range of physiological activities in plants that maximize the efficiency of photosynthesis, such as chloroplast relocations, stomata opening, and leaf expansion. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P93025|PHOT2_ARATH Phototropin-2 OS=Arabidopsis thaliana GN=PHOT2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1025 bits (2650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/866 (60%), Positives = 622/866 (71%), Gaps = 73/866 (8%)
Query: 116 EAGAAAQRAAEWGLVLKTDTETGKPQAVVARTSGGDDPNGKPGTSRRNSNNSVRSSGEMS 175
++ +R AEWGL + V SG D + K + S N +
Sbjct: 62 DSAKITERTAEWGL------------SAVKPDSGDDGISFKLSSEVERSKN-MSRRSSEE 108
Query: 176 DEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGR 235
+ PRVS +K ALST QQTFVVSDAT+P PI+YAS+GFF MTGY+SKE+VGR
Sbjct: 109 STSSESGAFPRVSQELKTALSTLQQTFVVSDATQPHCPIVYASSGFFTMTGYSSKEIVGR 168
Query: 236 NCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLK 295
NCRFLQG TD +VAKIR+ ++NG+SYCGRLLNYKKDGTPFWNLLT+ PIKDD+G +K
Sbjct: 169 NCRFLQGPDTDKNEVAKIRDCVKNGKSYCGRLLNYKKDGTPFWNLLTVTPIKDDQGNTIK 228
Query: 296 FIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRS-LSE 354
FIGMQVEVSK+TEG DK LRPNGL +SLIRYDARQKE A S+TE+VQ ++ +S + E
Sbjct: 229 FIGMQVEVSKYTEGVNDKALRPNGLSKSLIRYDARQKEKALDSITEVVQTIRHRKSQVQE 288
Query: 355 STNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQK 414
S + +++ S P P R + R S+ K +
Sbjct: 289 SVSNDTMVKPD----------------SSTTPTPGRQT----------RQSDEASKSFRT 322
Query: 415 SGRRSFMGLIGRKSQSTDDHDSFENEIIMEGDDDYESDDE--RPDSVDDKVRQKEMRKGI 472
GR S G K +S+++ E+ + ME ++ S + + DS D R++++R+GI
Sbjct: 323 PGRVS--TPTGSKLKSSNNR--HEDLLRMEPEELMLSTEVIGQRDSWDLSDRERDIRQGI 378
Query: 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPAT 532
DLATTLERIEKNFVI+DPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETD AT
Sbjct: 379 DLATTLERIEKNFVISDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDQAT 438
Query: 533 VRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 592
V+KIR AI +Q ++TVQLINYTKSGKKFWNLFHLQPMRDQKGE+QYFIGVQLDGS+H+EP
Sbjct: 439 VQKIRDAIRDQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVEP 498
Query: 593 LRNSIPEATAEESEKLVKQTAENVNEAVKELPDANLTPEDLWANHSKVVHPKPHRKDSPP 652
L+N + E T +S KLVK TA NV+EAV+ELPDAN PEDLWA HSK V+P PH K+S
Sbjct: 499 LQNRLSERTEMQSSKLVKATATNVDEAVRELPDANTRPEDLWAAHSKPVYPLPHNKESTS 558
Query: 653 WKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK 712
WKAI+KI SGE + L HF+PIKPLGSGDTGSVHLVEL G+G+ +AMKAM+K +MLNRNK
Sbjct: 559 WKAIKKIQASGETVGLHHFKPIKPLGSGDTGSVHLVELKGTGELYAMKAMEKTMMLNRNK 618
Query: 713 ---------------------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDA 745
T THVCLITD+CPGGELF LLDRQP K+L ED+
Sbjct: 619 AHRACIEREIISLLDHPFLPTLYASFQTSTHVCLITDFCPGGELFALLDRQPMKILTEDS 678
Query: 746 VRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 805
RFYAAEVV+ LEYLHC GI+YRDLKPEN+LL+ +GH+ L DFDLS +T+C PQL++P
Sbjct: 679 ARFYAAEVVIGLEYLHCLGIVYRDLKPENILLKKDGHIVLADFDLSFMTTCTPQLIIPAA 738
Query: 806 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 865
K+RR K Q P F+AEP SNSFVGTEEYIAPEII GAGHTSA+DWWALGILLYEML
Sbjct: 739 PSKRRRSKSQPLPTFVAEPSTQSNSFVGTEEYIAPEIITGAGHTSAIDWWALGILLYEML 798
Query: 866 YGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 925
YG TPFRGK RQKTFANILHKDL FPSS P SL +QL+ LL+RDP SRLGS GANEI
Sbjct: 799 YGRTPFRGKNRQKTFANILHKDLTFPSSIPVSLVGRQLINTLLNRDPSSRLGSKGGANEI 858
Query: 926 KKHPFFKGVNWALVRCMNPPELDAPL 951
K+H FF+G+NW L+R M+PP LDAPL
Sbjct: 859 KQHAFFRGINWPLIRGMSPPPLDAPL 884
|
Protein kinase that acts as a blue-light photoreceptor in a signal-transduction pathway for photo-induced movements. Mediates calcium spiking of extra- and intracellular origins in response to blue light. Involved in hypocotyl phototropism. Contributes to the chloroplast accumulation in low blue light and mediates their translocation (avoidance response) at high fluence. Regulates stomata opening and photomorphogenesis response of leaf tissue. Not involved in hypocotyl elongation inhibition, anthocyanin accumulation or cotyledon opening. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9ST27|PHOT2_ORYSJ Phototropin-2 OS=Oryza sativa subsp. japonica GN=PHOT2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1006 bits (2602), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/800 (62%), Positives = 594/800 (74%), Gaps = 34/800 (4%)
Query: 184 LPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGA 243
LPRVS +KDALS+ QQTFVVSDAT+PD PI+YAS GFF MTGY+ +EVVGRNCRFLQG
Sbjct: 86 LPRVSQELKDALSSLQQTFVVSDATRPDCPIIYASEGFFTMTGYSPREVVGRNCRFLQGP 145
Query: 244 GTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEV 303
TD +VAKIR+ +++G+S+CGRLLNY+KDG PFWNLLT+ PI+DD GKV+KFIGMQVEV
Sbjct: 146 DTDAAEVAKIRDAVKHGRSFCGRLLNYRKDGAPFWNLLTVTPIRDDNGKVIKFIGMQVEV 205
Query: 304 SKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRSLSESTN----RP 359
SK+TEG DK +RPN LP SLIRYD RQK+ A SS+TE+VQ +K+PR + P
Sbjct: 206 SKYTEGLSDKRMRPNELPVSLIRYDERQKDKAMSSMTEVVQTVKQPRGARAPADAALLTP 265
Query: 360 PIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRS 419
P + ++ A G S + R+S + +K SGR S
Sbjct: 266 PKMSDADKMAAMSPVVAPGTPSGGGGGAGSFKSPLWDLKKEESRLSRLASGRK--SGRSS 323
Query: 420 FMGL-IGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTL 478
MG IG++S E ER DS + R+K++R+GIDLATTL
Sbjct: 324 LMGFKIGKRSSVGSREAPAVVEEPAPAPPPAPEVVERTDSWERAEREKDIRQGIDLATTL 383
Query: 479 ERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRA 538
ERIEKNFVITDPR+PDNPIIFASDSFLELTEY+REEILGRNCRFLQGPETD TV KIR
Sbjct: 384 ERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQGTVDKIRE 443
Query: 539 AIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIP 598
AI Q ++TVQLINYTKSGKKFWNLFHLQPMRDQKGE+QYFIGVQLDGS+H+EPLRN +
Sbjct: 444 AIREQKEITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVEPLRNRLS 503
Query: 599 EATAEESEKLVKQTAENVNEAVKELPDANLTPEDLWANHSKVVHPKPHRKDSPPWKAIQK 658
E T +S KLVK TAENV++AV+ELPDANL PEDLWA HS V PKPH++++P W AI+K
Sbjct: 504 ENTEIQSAKLVKATAENVDDAVRELPDANLRPEDLWAIHSMRVSPKPHKRNNPSWIAIEK 563
Query: 659 ILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK------ 712
+ GE+I L+HF+P+KPLG GDTGSVHLVEL GSG+ FAMKAMDK VMLNRNK
Sbjct: 564 ATNLGEKIGLKHFKPVKPLGCGDTGSVHLVELQGSGELFAMKAMDKSVMLNRNKVHRACI 623
Query: 713 ---------------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAA 751
T THVCLITD+CPGGELF +LDRQP K+ +E+ RFYAA
Sbjct: 624 EREIYALLDHPFLPTLYTSFQTPTHVCLITDFCPGGELFAVLDRQPMKIFREECARFYAA 683
Query: 752 EVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRR 811
EVV+ LEYLHC GIIYRDLKPEN+LLQ +GH+ LTDFDLS LT+ KP ++ +T+ K+RR
Sbjct: 684 EVVIGLEYLHCLGIIYRDLKPENILLQADGHIVLTDFDLSFLTTSKPHVIKNSTSLKRRR 743
Query: 812 HKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 871
+ P F++EP SNSFVGTEEYIAPE+I GAGHTSA+DWWALGILLYEMLYG TPF
Sbjct: 744 SQEFLPPTFVSEPSTPSNSFVGTEEYIAPEVITGAGHTSAIDWWALGILLYEMLYGRTPF 803
Query: 872 RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
RGK R+KTF NILHKDL FPSS P SL AKQL++ LL RDP +R+GS+ GAN+IK+H FF
Sbjct: 804 RGKNRKKTFYNILHKDLTFPSSIPVSLAAKQLIHGLLQRDPSNRIGSNAGANDIKQHSFF 863
Query: 932 KGVNWALVRCMNPPELDAPL 951
+ +NW L+RCM+PPELD PL
Sbjct: 864 QDINWPLIRCMSPPELDVPL 883
|
Protein kinase that acts as a blue-light photoreceptor in a signal-transduction pathway for phototropic responses. Regulates a wide range of physiological activities in plants that maximize the efficiency of photosynthesis, such as chloroplast relocations, stomata opening, and leaf expansion. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q0DCT8|G11A_ORYSJ Protein kinase G11A OS=Oryza sativa subsp. japonica GN=Os06g0291600 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 295 bits (754), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 170/432 (39%), Positives = 227/432 (52%), Gaps = 80/432 (18%)
Query: 600 ATAEESEKLV--KQTAENVNEAVKELPDANLTPEDLWANHSKVVHPKPHRKDSPPWKAIQ 657
A+A S +LV +T E + + P + D A S KPH+ + W+AIQ
Sbjct: 122 ASASGSARLVGRSETGERGFSSSRCRPSTSSDVSDESACSSISSVTKPHKANDSRWEAIQ 181
Query: 658 KILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK----- 712
I + L HF+ +K LG GD GSV+L EL G+ YFAMK MDK + +R K
Sbjct: 182 MIRTRDGILGLSHFKLLKKLGCGDIGSVYLSELSGTKSYFAMKVMDKASLASRKKLLRAQ 241
Query: 713 ----------------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYA 750
T CL+ ++CPGG+L L RQ K E AV+FY
Sbjct: 242 TEKEILQCLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQRGKYFPEQAVKFYV 301
Query: 751 AEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL--------- 801
AE+++A+EYLH GIIYRDLKPENVL++ +GH+ L+DFDLS + P L+
Sbjct: 302 AEILLAMEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIRSSNPDAEA 361
Query: 802 --------------------------LPTT---------NEKKRRHKGQQN------PVF 820
PTT ++K R+ K + P
Sbjct: 362 LRKNNQAYCVQPACVEPSCMIQPSCATPTTCFGPRFFSKSKKDRKPKPEVVNQVSPWPEL 421
Query: 821 MAEPMRA-SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879
+AEP A S SFVGT EY+APEII G GH SAVDWW GI LYE+L+G TPF+G + T
Sbjct: 422 IAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRAT 481
Query: 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 939
N++ + L+FP S A+ L+ LL ++P+ RLG GA EIK+HPFF+GVNWAL+
Sbjct: 482 LFNVIGQPLRFPEYPVVSFSARDLIRGLLVKEPQQRLGCKRGATEIKQHPFFEGVNWALI 541
Query: 940 RCMNPPELDAPL 951
RC +PPE+ P+
Sbjct: 542 RCASPPEVPRPV 553
|
May play a role in the regulation of metabolism and signal transduction processes. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|A2YBX5|G11A_ORYSI Protein kinase G11A OS=Oryza sativa subsp. indica GN=OsI_021818 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 294 bits (753), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 170/432 (39%), Positives = 227/432 (52%), Gaps = 80/432 (18%)
Query: 600 ATAEESEKLV--KQTAENVNEAVKELPDANLTPEDLWANHSKVVHPKPHRKDSPPWKAIQ 657
A+A S +LV +T E + + P + D A S KPH+ + W+AIQ
Sbjct: 122 ASASGSARLVGRSETGERGFSSSRCRPSTSSDVSDESACSSISSVTKPHKANDSRWEAIQ 181
Query: 658 KILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK----- 712
I + L HF+ +K LG GD GSV+L EL G+ YFAMK MDK + +R K
Sbjct: 182 MIRTRDGILGLSHFKLLKKLGCGDIGSVYLSELNGTKSYFAMKVMDKASLASRKKLLRAQ 241
Query: 713 ----------------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYA 750
T CL+ ++CPGG+L L RQ K E AV+FY
Sbjct: 242 TEKEILQCLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQRGKYFPEQAVKFYV 301
Query: 751 AEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL--------- 801
AE+++A+EYLH GIIYRDLKPENVL++ +GH+ L+DFDLS + P L+
Sbjct: 302 AEILLAMEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIRSSNPDAEA 361
Query: 802 --------------------------LPTT---------NEKKRRHKGQQN------PVF 820
PTT ++K R+ K + P
Sbjct: 362 LRKNNQAYCVQPACVEPSCMIQPSCATPTTCFGPRFFSKSKKDRKPKPEVVNQVSPWPEL 421
Query: 821 MAEPMRA-SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879
+AEP A S SFVGT EY+APEII G GH SAVDWW GI LYE+L+G TPF+G + T
Sbjct: 422 IAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRAT 481
Query: 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 939
N++ + L+FP S A+ L+ LL ++P+ RLG GA EIK+HPFF+GVNWAL+
Sbjct: 482 LFNVIGQPLRFPEYPVVSFSARDLIRGLLVKEPQQRLGCKRGATEIKQHPFFEGVNWALI 541
Query: 940 RCMNPPELDAPL 951
RC +PPE+ P+
Sbjct: 542 RCASPPEVPRPV 553
|
May play a role in the regulation of metabolism and signal transduction processes. Oryza sativa subsp. indica (taxid: 39946) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LFA2|KIPK_ARATH Serine/threonine-protein kinase KIPK OS=Arabidopsis thaliana GN=KIPK PE=1 SV=1 | Back alignment and function description |
|---|
Score = 293 bits (751), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 157/385 (40%), Positives = 212/385 (55%), Gaps = 81/385 (21%)
Query: 644 KPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMD 703
KPH W+AI+ I + L+HF +K LG GD G+V+L EL G+ FA+K MD
Sbjct: 511 KPHMSMDVRWEAIKHIKVQYGSLGLRHFNLLKKLGCGDIGTVYLAELIGTNCLFAIKVMD 570
Query: 704 KGVMLNRNKT---------------------------KTHVCLITDYCPGGELFLLLDRQ 736
+ R K+ CL+ +YCPGG+L +L +Q
Sbjct: 571 NEFLARRKKSPRAQAEREILKMLDHPFLPTLYAQFTSDNLSCLVMEYCPGGDLHVLRQKQ 630
Query: 737 PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS----- 791
+ E A RFY AE+++ALEYLH GIIYRDLKPEN+L++ +GH+ LTDFDLS
Sbjct: 631 LGRCFPEPAARFYVAEILLALEYLHMLGIIYRDLKPENILVREDGHIMLTDFDLSLRCAV 690
Query: 792 -------------------------------CLT--SCKPQLLLP--TTNEKKRR----- 811
C+T SC+ P ++N+++ R
Sbjct: 691 NPTLVRSNSPPGKDPARISGPYNTSNCIQPFCITEPSCQVSCFSPRLSSNQQQGRKPKRG 750
Query: 812 --------HKGQQNPVFMAEPMRA-SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 862
H + P +AEP A SNSFVGT EY+APEII G GH +AVDWW G+LLY
Sbjct: 751 DHLSKTQQHLSRSLPQLVAEPTEARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVLLY 810
Query: 863 EMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGA 922
E+LYG TPF+G +T AN++ ++LKFP S S AK L+ LL ++P++RLGS +G+
Sbjct: 811 ELLYGKTPFKGYNNDETLANVVLQNLKFPDSPLVSFQAKDLIRGLLVKEPENRLGSEKGS 870
Query: 923 NEIKKHPFFKGVNWALVRCMNPPEL 947
EIK+HPFF+G+NWAL+RC PPEL
Sbjct: 871 VEIKRHPFFEGLNWALIRCAIPPEL 895
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P15792|KPK1_PHAVU Protein kinase PVPK-1 OS=Phaseolus vulgaris PE=2 SV=1 | Back alignment and function description |
|---|
Score = 290 bits (742), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 155/380 (40%), Positives = 204/380 (53%), Gaps = 76/380 (20%)
Query: 644 KPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMD 703
KPH+ + W+AIQ + + ++HFR +K LG GD GSV+L EL G+ FAMK M+
Sbjct: 202 KPHKANDIRWEAIQAVRTRDGMLEMRHFRLLKKLGCGDIGSVYLAELSGTRTSFAMKVMN 261
Query: 704 KGVMLNRNK---------------------------TKTHVCLITDYCPGGELFLLLDRQ 736
K + NR K T+ CL+ ++CPGG+L L RQ
Sbjct: 262 KTELANRKKLLRAQTEREILQSLDHPFLPTLYTHFETEIFSCLVMEFCPGGDLHALRQRQ 321
Query: 737 PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796
P K E AVRFY AEV+++LEYLH GIIYRDLKPENVL++ +GH+ L+DFDLS S
Sbjct: 322 PGKYFSEHAVRFYVAEVLLSLEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCSV 381
Query: 797 KPQLLLPTTNEKKRRH-------------------------------------------- 812
P L+ + N + +
Sbjct: 382 SPTLVKSSNNLQTKSSGYCVQPSCIEPTCVMQPDCIKPSCFTPRFLSGKSKKDKKSKPKN 441
Query: 813 --KGQQNPV--FMAEPMRA-SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYG 867
Q P+ +AEP A S SFVGT EY+APEII G GH SAVDWW GI LYE+L+G
Sbjct: 442 DMHNQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFG 501
Query: 868 YTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927
TPF+G + T N++ + L+FP S S A+ L+ LL ++P+ RL GA EIK+
Sbjct: 502 RTPFKGSANRATLFNVIGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQ 561
Query: 928 HPFFKGVNWALVRCMNPPEL 947
HPFF+ VNWAL+RC PPE+
Sbjct: 562 HPFFQNVNWALIRCATPPEV 581
|
Phaseolus vulgaris (taxid: 3885) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q05999|KPK7_ARATH Serine/threonine-protein kinase AtPK7 OS=Arabidopsis thaliana GN=PK7 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 276 bits (705), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 153/384 (39%), Positives = 209/384 (54%), Gaps = 76/384 (19%)
Query: 644 KPHRKDSPP-WKAIQKILDS-GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKA 701
KPHR ++ W AIQ++ G + + F+ IK LG GD G+V+L EL G+G FA+K
Sbjct: 153 KPHRDNNDKRWVAIQEVRSRVGSSLEAKDFKLIKKLGGGDIGNVYLAELIGTGVSFAVKV 212
Query: 702 MDKGVMLNRNK---------------------------TKTHVCLITDYCPGGELFLLLD 734
M+K + R K T+ + CL+ ++CPGG+L L
Sbjct: 213 MEKAAIAARKKLVRAQTEKEILQSLDHPFLPTLYSHFETEMNSCLVMEFCPGGDLHSLRQ 272
Query: 735 RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 794
+Q K E A RFY AEV++A+EYLH GIIYRDLKPENVL++ +GH+ L+DFDLS
Sbjct: 273 KQRGKYFPEQAARFYVAEVLLAMEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 332
Query: 795 SCKPQL----------------LLPTTNEK---------------------KRRHKGQQN 817
+ P L + PT ++ K +H+ + N
Sbjct: 333 AVSPTLVRFAAITLESKSSSYCIQPTCVDQSSCIVQPDCIQPVCFTPRFLSKGKHRKKSN 392
Query: 818 ---------PVFMAEPMRA-SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYG 867
P +AEP A S SFVGT EY+APEII G GH SAVDWW GI LYE+L+G
Sbjct: 393 DMSRQIRPLPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFG 452
Query: 868 YTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927
TPFRG + T N++ + L+FP S A+ L+ LL ++P+ RL GA EIK+
Sbjct: 453 ITPFRGGDNRATLFNVVGQPLRFPEHPNVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQ 512
Query: 928 HPFFKGVNWALVRCMNPPELDAPL 951
HPFF+ VNWAL+RC +PP++ P+
Sbjct: 513 HPFFQSVNWALIRCTSPPQIPQPV 536
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 975 | ||||||
| 225435157 | 1004 | PREDICTED: phototropin-1-like [Vitis vin | 0.986 | 0.958 | 0.773 | 0.0 | |
| 297746173 | 958 | unnamed protein product [Vitis vinifera] | 0.947 | 0.964 | 0.761 | 0.0 | |
| 224055599 | 977 | predicted protein [Populus trichocarpa] | 0.967 | 0.965 | 0.760 | 0.0 | |
| 401782496 | 1028 | phototropin 1 [Fragaria x ananassa] | 0.974 | 0.924 | 0.737 | 0.0 | |
| 255582071 | 1006 | serine/threonine protein kinase, putativ | 0.980 | 0.950 | 0.746 | 0.0 | |
| 350535803 | 1018 | phototropin-1 [Solanum lycopersicum] gi| | 0.972 | 0.931 | 0.712 | 0.0 | |
| 449460993 | 952 | PREDICTED: phototropin-1-like [Cucumis s | 0.875 | 0.897 | 0.778 | 0.0 | |
| 60099454 | 976 | phototropin [Phaseolus vulgaris] | 0.958 | 0.957 | 0.709 | 0.0 | |
| 15231245 | 996 | non-specific serine/threonine protein ki | 0.976 | 0.955 | 0.707 | 0.0 | |
| 356542583 | 977 | PREDICTED: phototropin-1-like [Glycine m | 0.96 | 0.958 | 0.713 | 0.0 |
| >gi|225435157|ref|XP_002281752.1| PREDICTED: phototropin-1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1561 bits (4041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 783/1012 (77%), Positives = 864/1012 (85%), Gaps = 50/1012 (4%)
Query: 2 DQSEKSPKQSSKACESPLSRDSRGSLEVFNPSTFSTRPTNPVFRPQPTWQTWMEQRESPE 61
D S KSP + PL RDSRGSLEVFNPST+STRPTN FRPQPTW++W E R +PE
Sbjct: 5 DDSAKSP-----SLIPPLPRDSRGSLEVFNPSTYSTRPTNQAFRPQPTWKSWAEPRGTPE 59
Query: 62 PEHA-KLNSKSSR-AEEITSWMALKDPAPQ------KPSLPPLIQKMTNDQEKSTVTKQL 113
E + +L+SKS R A+EITSWMALK+P+P + S+ P + ++K T QL
Sbjct: 60 REGSPELSSKSGRSADEITSWMALKEPSPAPPLPLAQKSVSPAFNVQDDTRQKPTRKTQL 119
Query: 114 SGEAGAAAQRAAEWGLVLKTDTETGKPQAVVARTSGGDDPNGKPGTSRRNSNNSVRSSGE 173
SGE AAQRAAEWGL+LKTDTETGKPQ V RTSGGD+PN K GTSRRNS NSVRSSGE
Sbjct: 120 SGEVDNAAQRAAEWGLMLKTDTETGKPQGVAVRTSGGDEPNYKTGTSRRNSGNSVRSSGE 179
Query: 174 MSDEGG--KEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKE 231
MSDEGG K++ PRVS+ +KDALSTFQQTFVVSDATKPDYPI+YASAGFFKMTGYTSKE
Sbjct: 180 MSDEGGAGKDRAFPRVSEDLKDALSTFQQTFVVSDATKPDYPILYASAGFFKMTGYTSKE 239
Query: 232 VVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEG 291
V+GRNCRFLQG+GTDPEDVAKIRE L G SYCGRLLNYKKDGTPFWNLLTI+PIKD+ G
Sbjct: 240 VIGRNCRFLQGSGTDPEDVAKIREALHAGNSYCGRLLNYKKDGTPFWNLLTISPIKDENG 299
Query: 292 KVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRS 351
VLKFIGMQVEVSKHTEG+K+KM RPNGLPESLIRYDARQK+MAT+SV+ELVQA+KKPRS
Sbjct: 300 NVLKFIGMQVEVSKHTEGSKEKMTRPNGLPESLIRYDARQKDMATNSVSELVQAVKKPRS 359
Query: 352 LSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKK 411
LSES++RP +RKSE G E+ER A GRR SE+V PPRRNS G R SMQRISE+PEKK
Sbjct: 360 LSESSDRP-FMRKSEDG-EQERPEAPGRRNSESVAPPRRNSQSGR-RASMQRISELPEKK 416
Query: 412 KQKSGRRSFMGLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKG 471
+KS R SFM ++ RKSQ+ + F+ E++++ D DDERPDS+D+K RQ+EMR+G
Sbjct: 417 PRKSSRLSFMRIM-RKSQAHTEE--FDTEVLVD-DTSDSEDDERPDSIDNKTRQREMRRG 472
Query: 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPA 531
IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPA
Sbjct: 473 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPA 532
Query: 532 TVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591
TVRKIR AIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEH+E
Sbjct: 533 TVRKIREAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHVE 592
Query: 592 PLRNSIPEATAEESEKLVKQTAENVNEAVKELPDANLTPEDLWANHSKVVHPKPHRKDSP 651
PL N IPE+TA+ES KLVK+TAEN+++AV+ELPDANL PEDLW+NHSKVV PKPHRK+S
Sbjct: 593 PLHNCIPESTAKESAKLVKETAENIDDAVRELPDANLKPEDLWSNHSKVVLPKPHRKESS 652
Query: 652 PWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN 711
WKAIQKIL+ GEQI L+HFRP+KPLGSGDTGSVHLVELCG+G+YFAMKAMDK VMLNRN
Sbjct: 653 AWKAIQKILEDGEQIGLKHFRPVKPLGSGDTGSVHLVELCGTGEYFAMKAMDKNVMLNRN 712
Query: 712 K---------------------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKED 744
K TKTH+CLITDYCPGGELFLLLDRQPTKVLKED
Sbjct: 713 KVHRACAEREILDMLDHPFLPALYASFQTKTHICLITDYCPGGELFLLLDRQPTKVLKED 772
Query: 745 AVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 804
AVRFYAAEVVVALEYLHCQG+IYRDLKPENVLLQ +GHV+LTDFDLSCLTSCKPQLL+P
Sbjct: 773 AVRFYAAEVVVALEYLHCQGVIYRDLKPENVLLQSSGHVALTDFDLSCLTSCKPQLLMPN 832
Query: 805 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 864
TNEKKR+HKGQQNP+FMAEPMRASNSFVGTEEYIAPEII GAGHTSAVDWWALGILLYEM
Sbjct: 833 TNEKKRQHKGQQNPIFMAEPMRASNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEM 892
Query: 865 LYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 924
LYGYTPFRGKTRQKTFANILHKDLKFPSS SL+AKQLMYRLLHRDPK+RLGS EGANE
Sbjct: 893 LYGYTPFRGKTRQKTFANILHKDLKFPSSISVSLNAKQLMYRLLHRDPKNRLGSREGANE 952
Query: 925 IKKHPFFKGVNWALVRCMNPPELDA-PLFATDTEKEYKVVDPGMQDLQQNVF 975
IK+HPFF+GVNWALVRCMNPPELDA PL TD EKE K VDP + DLQ N+F
Sbjct: 953 IKRHPFFRGVNWALVRCMNPPELDAPPLETTDAEKEVKSVDPELLDLQTNIF 1004
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297746173|emb|CBI16229.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1521 bits (3937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 765/1004 (76%), Positives = 838/1004 (83%), Gaps = 80/1004 (7%)
Query: 2 DQSEKSPKQSSKACESPLSRDSRGSLEVFNPSTFSTRPTNPVFRPQPTWQTWMEQRESPE 61
D S KSP + PL RDSRGSLEVFNPST+STRPTN FRPQPTW++W E R S
Sbjct: 5 DDSAKSP-----SLIPPLPRDSRGSLEVFNPSTYSTRPTNQAFRPQPTWKSWAEPRRS-- 57
Query: 62 PEHAKLNSKSSRAEEITSWMALKDPAPQKPSLPPLIQKMTNDQEKSTVTKQLSGEAGAAA 121
A+EITSWMALK+P+ +KS
Sbjct: 58 ------------ADEITSWMALKEPS---------PAPPLPLAQKS-------------- 82
Query: 122 QRAAEWGLVLKTDTETGKPQAVVARTSGGDDPNGKPGTSRRNSNNSVRSSGEMSDEG--G 179
RAAEWGL+LKTDTETGKPQ V RTSGGD+PN K GTSRRNS NSVRSSGEMSDEG G
Sbjct: 83 -RAAEWGLMLKTDTETGKPQGVAVRTSGGDEPNYKTGTSRRNSGNSVRSSGEMSDEGGAG 141
Query: 180 KEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRF 239
K++ PRVS+ +KDALSTFQQTFVVSDATKPDYPI+YASAGFFKMTGYTSKEV+GRNCRF
Sbjct: 142 KDRAFPRVSEDLKDALSTFQQTFVVSDATKPDYPILYASAGFFKMTGYTSKEVIGRNCRF 201
Query: 240 LQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGM 299
LQG+GTDPEDVAKIRE L G SYCGRLLNYKKDGTPFWNLLTI+PIKD+ G VLKFIGM
Sbjct: 202 LQGSGTDPEDVAKIREALHAGNSYCGRLLNYKKDGTPFWNLLTISPIKDENGNVLKFIGM 261
Query: 300 QVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRSLSESTNRP 359
QVEVSKHTEG+K+KM RPNGLPESLIRYDARQK+MAT+SV+ELVQA+KKPRSLSES++R
Sbjct: 262 QVEVSKHTEGSKEKMTRPNGLPESLIRYDARQKDMATNSVSELVQAVKKPRSLSESSDR- 320
Query: 360 PIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRS 419
P +RKSE G E+ER A GRR SE+V PPRRNS G R SMQRISE+PEKK +KS R S
Sbjct: 321 PFMRKSEDG-EQERPEAPGRRNSESVAPPRRNSQSGR-RASMQRISELPEKKPRKSSRLS 378
Query: 420 FMGLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLE 479
FM ++ RKSQ+ + F+ E++++ D DDERPDS+D+K RQ+EMR+GIDLATTLE
Sbjct: 379 FMRIM-RKSQAHTEE--FDTEVLVD-DTSDSEDDERPDSIDNKTRQREMRRGIDLATTLE 434
Query: 480 RIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAA 539
RIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIR A
Sbjct: 435 RIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREA 494
Query: 540 IDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPE 599
IDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEH+EPL N IPE
Sbjct: 495 IDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHVEPLHNCIPE 554
Query: 600 ATAEESEKLVKQTAENVNEAVKELPDANLTPEDLWANHSKVVHPKPHRKDSPPWKAIQKI 659
+TA+ES KLVK+TAEN+++AV+ELPDANL PEDLW+NHSKVV PKPHRK+S WKAIQKI
Sbjct: 555 STAKESAKLVKETAENIDDAVRELPDANLKPEDLWSNHSKVVLPKPHRKESSAWKAIQKI 614
Query: 660 LDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK------- 712
L+ GEQI L+HFRP+KPLGSGDTGSVHLVELCG+G+YFAMKAMDK VMLNRNK
Sbjct: 615 LEDGEQIGLKHFRPVKPLGSGDTGSVHLVELCGTGEYFAMKAMDKNVMLNRNKVHRACAE 674
Query: 713 --------------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAE 752
TKTH+CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAE
Sbjct: 675 REILDMLDHPFLPALYASFQTKTHICLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAE 734
Query: 753 VVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRH 812
VVVALEYLHCQG+IYRDLKPENVLLQ +GHV+LTDFDLSCLTSCKPQLL+P TNEKKR+H
Sbjct: 735 VVVALEYLHCQGVIYRDLKPENVLLQSSGHVALTDFDLSCLTSCKPQLLMPNTNEKKRQH 794
Query: 813 KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 872
KGQQNP+FMAEPMRASNSFVGTEEYIAPEII GAGHTSAVDWWALGILLYEMLYGYTPFR
Sbjct: 795 KGQQNPIFMAEPMRASNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFR 854
Query: 873 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
GKTRQKTFANILHKDLKFPSS SL+AKQLMYRLLHRDPK+RLGS EGANEIK+HPFF+
Sbjct: 855 GKTRQKTFANILHKDLKFPSSISVSLNAKQLMYRLLHRDPKNRLGSREGANEIKRHPFFR 914
Query: 933 GVNWALVRCMNPPELDA-PLFATDTEKEYKVVDPGMQDLQQNVF 975
GVNWALVRCMNPPELDA PL TD EKE K VDP + DLQ N+F
Sbjct: 915 GVNWALVRCMNPPELDAPPLETTDAEKEVKSVDPELLDLQTNIF 958
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224055599|ref|XP_002298559.1| predicted protein [Populus trichocarpa] gi|222845817|gb|EEE83364.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1510 bits (3910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 767/1009 (76%), Positives = 841/1009 (83%), Gaps = 66/1009 (6%)
Query: 1 MDQSEKSPKQSSKACESPLSRDSRGSLEVFNPST-FSTRPTNPVFRP-QPTWQTWMEQ-- 56
M+ ++KS KQSS PL RDSRGSLEVFNPS+ + RPTNP FR PTW++W++
Sbjct: 1 MEATDKSSKQSSGNV-PPLPRDSRGSLEVFNPSSAYLNRPTNPAFRSSNPTWKSWVDSSA 59
Query: 57 RESPEPEHAKLNSKSSRAEEITSWMALKDPAPQKPSLPPLIQKMTNDQEKSTVTKQLSGE 116
+ PEPE A + TSWMALKDP +KP +QLSGE
Sbjct: 60 KNEPEPEEAPIT---------TSWMALKDP--KKPK------------------QQLSGE 90
Query: 117 AGAAAQRAAEWGLVLKTDTETGKPQAVVARTSGGDDPNGKPGTSRRNSNNSVRSSGEMSD 176
G A +RAAEWGLVLKTD ETGKPQ V RTSGGDDPN KPGTSRR+SNNSVR+SGE+SD
Sbjct: 91 IGVATKRAAEWGLVLKTDDETGKPQGVSVRTSGGDDPNAKPGTSRRDSNNSVRNSGELSD 150
Query: 177 EGG--KEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVG 234
+GG +PRVS+ +++ALSTFQQTFVVSDATKPDYPI+YASAGFFKMTGYTSKEV+G
Sbjct: 151 DGGTSNNSNIPRVSEDIRNALSTFQQTFVVSDATKPDYPILYASAGFFKMTGYTSKEVIG 210
Query: 235 RNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVL 294
RNCRFLQGAGTDPEDVAKIRE L+ +YCGRLLNYKKDG+PFWNLLTIAPIKDD GKVL
Sbjct: 211 RNCRFLQGAGTDPEDVAKIREALRGEGTYCGRLLNYKKDGSPFWNLLTIAPIKDDSGKVL 270
Query: 295 KFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRSLSE 354
KFIGM VEVSKHTEG+KDK LRPNGLP SLIRYDARQKEMATSSVTELVQA+ +PR+LSE
Sbjct: 271 KFIGMLVEVSKHTEGSKDKTLRPNGLPGSLIRYDARQKEMATSSVTELVQAVNRPRALSE 330
Query: 355 STNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQK 414
STNRP ++RKSEGG E ER GA+GRR SENV P RRNS+ G R SMQRISE+PEKK +K
Sbjct: 331 STNRP-LMRKSEGGGEGERKGAIGRRNSENVAPNRRNSHRG-TRNSMQRISELPEKKPRK 388
Query: 415 SGRRSFMGLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDL 474
S R SFMGL+ + + S D+ + + + D + DD R DS+DDKVR+KEMRKGIDL
Sbjct: 389 SSRLSFMGLMRKSTHSNDESFDVGITLDDDFESDDDDDDARLDSLDDKVRKKEMRKGIDL 448
Query: 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVR 534
ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVR
Sbjct: 449 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVR 508
Query: 535 KIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLR 594
KIR AIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEH+EP
Sbjct: 509 KIREAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHVEPRT 568
Query: 595 NSIPEATAEESEKLVKQTAENVNEAVKELPDANLTPEDLWANHSKVVHPKPHRKDSPPWK 654
NSIPEATA ESE+LVKQTAENV++A +ELPDAN+ PEDLWANHSKVV+PKPHRKDSP WK
Sbjct: 569 NSIPEATAIESEQLVKQTAENVDDAARELPDANMRPEDLWANHSKVVYPKPHRKDSPSWK 628
Query: 655 AIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK-- 712
AIQKIL+SGEQ+ L+HFRP+KPLGSGDTGSVHLVEL G+GQ+FAMK MDK MLNRNK
Sbjct: 629 AIQKILESGEQLGLKHFRPVKPLGSGDTGSVHLVELYGTGQFFAMKTMDKAAMLNRNKVH 688
Query: 713 -------------------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVR 747
TKTH+CLITDYCPGGELFLLLDRQP KVLKEDAVR
Sbjct: 689 RACAEREILDMLDHPFLPALYASFQTKTHICLITDYCPGGELFLLLDRQPKKVLKEDAVR 748
Query: 748 FYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 807
FYAAEVV+ALEYLHCQGIIYRDLKPENVLLQ NGHV+LTDFDLSCLTSCKPQLL+P+TNE
Sbjct: 749 FYAAEVVIALEYLHCQGIIYRDLKPENVLLQSNGHVALTDFDLSCLTSCKPQLLIPSTNE 808
Query: 808 KKRRHKGQQN-PVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY 866
KKR K QQ PVFMAEPMRASNSFVGTEEYIAPEII GAGHTSAVDWWALGILLYEMLY
Sbjct: 809 KKRHRKHQQAPPVFMAEPMRASNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLY 868
Query: 867 GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926
GYTPFRGKTRQKTFANILHKDLKFP S P SL+AKQLMYRLLHRDPK+RLGS EGAN+IK
Sbjct: 869 GYTPFRGKTRQKTFANILHKDLKFPGSIPVSLNAKQLMYRLLHRDPKNRLGSREGANDIK 928
Query: 927 KHPFFKGVNWALVRCMNPPELDAPLFATDTEKEYKVVDPGMQDLQQNVF 975
+HPFFKGVNWALVRC+NPPEL+AP + EKE KVVDPGMQDLQ N+F
Sbjct: 929 RHPFFKGVNWALVRCLNPPELEAPFLESGEEKEAKVVDPGMQDLQTNIF 977
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|401782496|dbj|BAM36551.1| phototropin 1 [Fragaria x ananassa] | Back alignment and taxonomy information |
|---|
Score = 1469 bits (3804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 753/1021 (73%), Positives = 828/1021 (81%), Gaps = 71/1021 (6%)
Query: 18 PLSRDSRGSLEVFNPSTFSTRPTNPV-FRPQ--PTWQTWMEQRES-----PEPEHAKLNS 69
PL RDSRGSLE+FNPS STRP +P FR TW+TW++ R++ S
Sbjct: 16 PLPRDSRGSLEIFNPS--STRPASPPPFRQSKPATWKTWLDPRDTLNPKPDPSPPPIPAS 73
Query: 70 KSSRAE-EITSWMALKD----------PAPQKPSLPPLIQKMTNDQEKSTVTKQLSGEAG 118
KS R + ITSWMALKD P+ Q PP IQ+ + V + + E G
Sbjct: 74 KSGRDDGTITSWMALKDFPPTPPPPSKPSKQSQQAPPYIQQQQTIS--AAVNDKSTPEHG 131
Query: 119 AAAQRAAEWGLVLKTDTETGKPQAVVARTSGG-DDPNGKPGTSRRNSNNSVRSSGEMSDE 177
AAQRAAEWGLVLKTDTETGKPQ V R SGG +DP+ KPGTSRRNSNNSVRSSGE+SD+
Sbjct: 132 DAAQRAAEWGLVLKTDTETGKPQGVTTRNSGGPEDPSHKPGTSRRNSNNSVRSSGELSDD 191
Query: 178 GGKEKG----LPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVV 233
GG G PRVS+ +K+ LSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEV+
Sbjct: 192 GGGGGGIGKGFPRVSEDLKNVLSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVI 251
Query: 234 GRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKV 293
GRNCRFLQGA TDPEDVA++RE L SYCGRLLNYKKDGTPFWNLLTIAPIKD+ GKV
Sbjct: 252 GRNCRFLQGADTDPEDVAQLREALAKNTSYCGRLLNYKKDGTPFWNLLTIAPIKDETGKV 311
Query: 294 LKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRSLS 353
LKFIGMQVEVSKHTEG+KDKMLRPNGLPESLIRYDARQKE AT SVTELVQA+++PRSLS
Sbjct: 312 LKFIGMQVEVSKHTEGSKDKMLRPNGLPESLIRYDARQKEKATHSVTELVQAVRRPRSLS 371
Query: 354 ESTNRPPIIRKSEGGVEEER---------AGALGRRKSENVPPPRRNSYGGGCRTSMQRI 404
ESTNRP RKS GG E + +L RR SE+V PPRRNS G SM I
Sbjct: 372 ESTNRP--FRKSGGGGRGEEVIEAHARPSSESLPRRNSESVAPPRRNSLGDA-NFSMHSI 428
Query: 405 SEVPEKKKQKSGRRSFMGLIGRKSQSTD--DHDSFENEIIMEGDDDYESDDERPDSVDDK 462
EVPEKK++K RRSFMG++ +KSQ+ + D D+F+ E D +DERP S+DDK
Sbjct: 429 KEVPEKKQKKPRRRSFMGIM-KKSQTQNQLDDDTFDEFGASEDVRDDSDNDERPMSLDDK 487
Query: 463 VRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRF 522
VR+KEMRKG+DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRF
Sbjct: 488 VRKKEMRKGMDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRF 547
Query: 523 LQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGV 582
LQGPETDPATV+KIR AIDNQT+VTVQLINYTKSGKKFWN+FHLQPMRDQKGEVQYFIGV
Sbjct: 548 LQGPETDPATVKKIREAIDNQTEVTVQLINYTKSGKKFWNVFHLQPMRDQKGEVQYFIGV 607
Query: 583 QLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEAVKELPDANLTPEDLWANHSKVVH 642
QLDGS+H+EPL+NSIPE A+ESEKLVK+TA NV+EA +ELPDAN+ PEDLW NHSKVVH
Sbjct: 608 QLDGSQHIEPLQNSIPEVAAKESEKLVKETAVNVDEAARELPDANMKPEDLWMNHSKVVH 667
Query: 643 PKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAM 702
PKPHRKDSPPW AIQKILDSGEQI L+HF+PIKPLGSGDTGSVHLV+LCG+ QYFAMKAM
Sbjct: 668 PKPHRKDSPPWIAIQKILDSGEQIGLKHFKPIKPLGSGDTGSVHLVQLCGTDQYFAMKAM 727
Query: 703 DKGVMLNRNK---------------------------TKTHVCLITDYCPGGELFLLLDR 735
DK +MLNRNK TKTHVCLITDY PGGELFLLLD
Sbjct: 728 DKNIMLNRNKVHRACAEREILDMLDHPFLPALYASFQTKTHVCLITDYYPGGELFLLLDT 787
Query: 736 QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795
QPTKVLKE++VRFY AEVVVALEYLHCQGIIYRDLKPENVLLQ NGHV+LTDFDLSCLTS
Sbjct: 788 QPTKVLKENSVRFYVAEVVVALEYLHCQGIIYRDLKPENVLLQSNGHVTLTDFDLSCLTS 847
Query: 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 855
CKPQLLLPT NEKKR HK Q +P+FMAEPMRASNSFVGTEEYIAPEII GAGH+SAVDWW
Sbjct: 848 CKPQLLLPTINEKKRHHKRQHDPIFMAEPMRASNSFVGTEEYIAPEIITGAGHSSAVDWW 907
Query: 856 ALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
ALGIL+YEMLYGYTPFRGKTRQKTFANILHKDLKFP S P SL AKQLMYRLLHRDPK+R
Sbjct: 908 ALGILIYEMLYGYTPFRGKTRQKTFANILHKDLKFPGSIPASLQAKQLMYRLLHRDPKNR 967
Query: 916 LGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFA-TDTEKEYKVVDPGMQDLQQNV 974
LGS EGANEIK+HPFF+GVNWALVRCMNPP+LD+PLF T+ EK K+VDP MQDLQ N+
Sbjct: 968 LGSLEGANEIKRHPFFRGVNWALVRCMNPPQLDSPLFGTTEAEKGAKLVDPEMQDLQTNI 1027
Query: 975 F 975
F
Sbjct: 1028 F 1028
|
Source: Fragaria x ananassa Species: Fragaria x ananassa Genus: Fragaria Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255582071|ref|XP_002531832.1| serine/threonine protein kinase, putative [Ricinus communis] gi|223528528|gb|EEF30552.1| serine/threonine protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1452 bits (3760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 760/1018 (74%), Positives = 845/1018 (83%), Gaps = 62/1018 (6%)
Query: 3 QSEKSPKQSSKACESPLSRDSRGSLEVFNPSTFSTRPT-NPVFRPQPTWQTWMEQ-RESP 60
+S S KQS +PL RD RGSLEVFNPS+ S+ + N +RP W+TW+E+ + P
Sbjct: 6 RSSSSNKQSPPVI-TPLPRDPRGSLEVFNPSSTSSTRSTNLAYRPNTNWKTWVEKPHDGP 64
Query: 61 EPEHAKLNSKSSRAEEITSWMALKDPAPQKPSLPPLI-----QKMTNDQEKSTVTKQLSG 115
+ KS RAEE T+WMA+KDPAP P+LP L Q + NDQ+K+ T +LSG
Sbjct: 65 NTQSP---PKSGRAEEATTWMAIKDPAPS-PTLPLLSSPSHSQLIGNDQDKNPAT-ELSG 119
Query: 116 EAGAAAQRAAEWGLVLKTDTETGKPQAVVARTSGGDDPN-GKPGTSRRNSNNSVRSSG-E 173
EA AA+RAAEWGLVLK +T+ GKPQ V R+SGGD+PN KPGTSRRNSNNSV+SSG +
Sbjct: 120 EAEMAARRAAEWGLVLKPETQEGKPQVGV-RSSGGDEPNSNKPGTSRRNSNNSVQSSGGD 178
Query: 174 MS-DEGGKE-KGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKE 231
+S D+GGKE KG+PRVS+ +K+ALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKE
Sbjct: 179 LSEDDGGKENKGIPRVSEDIKNALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKE 238
Query: 232 VVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEG 291
V+GRNCRFLQGA TDPEDVAKIRE LQ+ SYCGRLLNYKKDGTPFWNLLTI+PIKD+ G
Sbjct: 239 VIGRNCRFLQGADTDPEDVAKIREALQSENSYCGRLLNYKKDGTPFWNLLTISPIKDESG 298
Query: 292 KVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRS 351
KVLK+IGMQVEVSK TEG+KDKMLRPNGLPESLIRYDARQKEMATSSVTELVQA+K+PRS
Sbjct: 299 KVLKYIGMQVEVSKFTEGSKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAVKRPRS 358
Query: 352 LSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKK 411
LSE+T+RP ++RKSE G E+ER GALGRR SENVP RRNS GG R SMQ I+E+PEKK
Sbjct: 359 LSEATSRP-LMRKSESGGEDERKGALGRRNSENVPSNRRNSLGGA-RNSMQSINELPEKK 416
Query: 412 KQKSGRRSFMGLIGRKSQSTDDHDSFENEIIMEGDDDYESDDE------RPDSVDDKVRQ 465
+KS R SFMGL+ +KS + + DSF++ +I+ GDDD DDE RP+SVDDKVR+
Sbjct: 417 PRKSIRLSFMGLM-KKSSTQSNADSFDDALILNGDDDDVDDDEESEIDERPNSVDDKVRK 475
Query: 466 KEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQG 525
KEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQG
Sbjct: 476 KEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQG 535
Query: 526 PETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLD 585
PETDPATVRKIR AIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLD
Sbjct: 536 PETDPATVRKIREAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLD 595
Query: 586 GSEHLEPLRNSIPEATAEESEKLVKQTAENVNEAVKELPDANLTPEDLWANHSKVVHPKP 645
GSEH+EP N IPE TA+ESEKLVKQTAENV+EAV+ELPDAN PEDLWANHSK VH KP
Sbjct: 596 GSEHVEPRSNCIPEETAQESEKLVKQTAENVDEAVRELPDANSKPEDLWANHSKAVHAKP 655
Query: 646 HRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKG 705
HRKD+P WKAIQKILD GE I L+HFRP+KPLGSGDTGSVHLVEL G+ +FAMKAMDK
Sbjct: 656 HRKDTPSWKAIQKILDDGEPIGLKHFRPVKPLGSGDTGSVHLVELSGTDHHFAMKAMDKN 715
Query: 706 VMLNRNK---------------------------TKTHVCLITDYCPGGELFLLLDRQPT 738
VMLNRNK TKTH+CLITDYC GGELF+LLDRQPT
Sbjct: 716 VMLNRNKVHRACAEREILDMLDHPFLPALYASFQTKTHICLITDYCSGGELFMLLDRQPT 775
Query: 739 KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798
KVLKEDA RFYAAEVV+ALEYLHCQGIIYRDLKPENVLLQ +GHVSLTDFDLSCLTSCKP
Sbjct: 776 KVLKEDAARFYAAEVVIALEYLHCQGIIYRDLKPENVLLQSSGHVSLTDFDLSCLTSCKP 835
Query: 799 QLLLPTTNEKKR-RHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWAL 857
QLL+PT +EKK+ R QQ+P+FMAEPMRASNSFVGTEEYIAP +I +A
Sbjct: 836 QLLIPTVDEKKKHRKHHQQDPIFMAEPMRASNSFVGTEEYIAPVLIFHF-------IFAT 888
Query: 858 GILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLG 917
GILLYEMLYGYTPFRGKTRQKTFAN+LHKDLKFP S SLHAKQLMYRLLHRDPK+RLG
Sbjct: 889 GILLYEMLYGYTPFRGKTRQKTFANVLHKDLKFPRSRQVSLHAKQLMYRLLHRDPKNRLG 948
Query: 918 SHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDTEKEYKVVDPGMQDLQQNVF 975
SHEGANEIK+HPFFKGVNWALVRCMNPPELD P+F + EKE K++DP + DLQ NVF
Sbjct: 949 SHEGANEIKRHPFFKGVNWALVRCMNPPELDTPIFENEAEKEAKLIDPELLDLQNNVF 1006
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|350535803|ref|NP_001234214.1| phototropin-1 [Solanum lycopersicum] gi|151176133|gb|ABN42185.2| phototropin-1 [Solanum lycopersicum] | Back alignment and taxonomy information |
|---|
Score = 1422 bits (3680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 724/1016 (71%), Positives = 810/1016 (79%), Gaps = 68/1016 (6%)
Query: 18 PLSRDSRGSLEVFNPSTFSTRPTNPVFRPQPTWQTWM-----------------EQRESP 60
PL RD RGSLEVFNPST+S+R TNPVFR QP+W+ W EQ P
Sbjct: 13 PLPRDPRGSLEVFNPSTYSSRSTNPVFRSQPSWKNWTAADPITRSTIPETEEKTEQIAIP 72
Query: 61 EPEHAKLNSKSSRAEEITSWMALKDPAPQKPSLPPLIQKMTNDQEKSTVTKQLSGEAGAA 120
+ K+N + W L+ Q+ L L++ + +K E GAA
Sbjct: 73 QIRVTKMNKSL-----LHGWQLLR---LQRNWLLRLLKNQLPVVRRFN-SKAAVDEVGAA 123
Query: 121 AQRAAEWGLVLKTDTETGKPQAVVARTSGGDDPNGKPGTSRRNSNNSVRSSGEMSDEG-G 179
AQRAAEWGLVLKTD ETGK Q V RTSG DD NGK TSRR+S NS RSSGE SD+G G
Sbjct: 124 AQRAAEWGLVLKTDDETGKLQGVKVRTSG-DDTNGKTETSRRDSGNSGRSSGEFSDDGAG 182
Query: 180 KEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRF 239
KE+G+PRVS+ ++DALSTFQQTFVVSDATKPDYPI+YASAGFFKMTGYTSKEV+GRNCRF
Sbjct: 183 KERGIPRVSEDLRDALSTFQQTFVVSDATKPDYPILYASAGFFKMTGYTSKEVIGRNCRF 242
Query: 240 LQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGM 299
+QG+GTDPEDVA IRE LQ+G +YCGRLLNYKKDGTPFWNLLTIAPIKDD GKVLKFIGM
Sbjct: 243 MQGSGTDPEDVATIREALQSGSTYCGRLLNYKKDGTPFWNLLTIAPIKDDAGKVLKFIGM 302
Query: 300 QVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPR---SLSEST 356
QVEVSKHTEG+K+K +RPNGLPESLIRYD RQKEMA++SV EL++ +K PR +LSEST
Sbjct: 303 QVEVSKHTEGSKEKTVRPNGLPESLIRYDVRQKEMASNSVNELLEEIKNPRRARALSEST 362
Query: 357 N-RPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSM--QRISEVPEKKKQ 413
N RP +RKSEG E+ + N P RR+S+ G T+M ++I+EVPEKK +
Sbjct: 363 NNRPTFMRKSEGDQVEQDKQDTHKLNLVNKAPARRHSHAGTRTTTMKMEKINEVPEKKPK 422
Query: 414 KSGRRSFMGLIGRKSQSTDDHDS---FENEIIMEGDDDYESDDE---RPDSVDDKVRQKE 467
KS R SFMG++ +K ST FE + M+ DDD + + + RP SVDDKVR+KE
Sbjct: 423 KSARLSFMGIMKKKRSSTTMTTDDDDFEARMTMDNDDDDDDESDNDGRPVSVDDKVRKKE 482
Query: 468 MRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPE 527
MRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPE
Sbjct: 483 MRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPE 542
Query: 528 TDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587
TDPATV+KIR AIDNQTDVTVQLINYTK+GKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS
Sbjct: 543 TDPATVKKIRQAIDNQTDVTVQLINYTKTGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 602
Query: 588 EHLEPLRNSIPEATAEESEKLVKQTAENVNEAVKELPDANLTPEDLWANHSKVVHPKPHR 647
+H+EPL+NSIPE A ES KL+K+TA NV+EAV+ELPDAN PEDLW NHSKVV PKPHR
Sbjct: 603 QHVEPLQNSIPEDKATESAKLIKETAGNVDEAVRELPDANSKPEDLWRNHSKVVQPKPHR 662
Query: 648 KDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM 707
KDSP WKAIQKIL+SGE I L+HF+PIKPLGSGDTGSVHLVELCG+ Q+FAMKAMDK +M
Sbjct: 663 KDSPSWKAIQKILESGEPIGLKHFKPIKPLGSGDTGSVHLVELCGTDQHFAMKAMDKSIM 722
Query: 708 LNRNK---------------------------TKTHVCLITDYCPGGELFLLLDRQPTKV 740
LNRNK TKTH+CLITDY PGGELF+LLDRQ TKV
Sbjct: 723 LNRNKVHRACAEREILDMLDHPFLPALYASFQTKTHICLITDYYPGGELFMLLDRQQTKV 782
Query: 741 LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800
LKEDA RFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ GHVSLTDFDLSCLTSCKPQL
Sbjct: 783 LKEDAARFYAAEVVVALEYLHCQGIIYRDLKPENVLLQSGGHVSLTDFDLSCLTSCKPQL 842
Query: 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGIL 860
L+P NEKK+ KGQ NP+FMAEPMRASNSFVGTEEYIAPEII GAGHTSAVDWWALGIL
Sbjct: 843 LVPEINEKKKHQKGQHNPIFMAEPMRASNSFVGTEEYIAPEIITGAGHTSAVDWWALGIL 902
Query: 861 LYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 920
LYEMLYGYTPFRGKTRQKTF+NILHKDLKFP S +SLHAKQLMYRLLHRDPK+RLGS E
Sbjct: 903 LYEMLYGYTPFRGKTRQKTFSNILHKDLKFPGSIQSSLHAKQLMYRLLHRDPKNRLGSRE 962
Query: 921 GANEIKKHPFFKGVNWALVRCMNPPELD-APLFATDTEKEYKVVDPGMQDLQQNVF 975
GANEIK+HPFF+GVNWAL+RCMNPP+LD AP T++EKE K ++P M+DLQ NVF
Sbjct: 963 GANEIKQHPFFRGVNWALIRCMNPPKLDSAPFLGTESEKEGKDINPEMEDLQTNVF 1018
|
Source: Solanum lycopersicum Species: Solanum lycopersicum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449460993|ref|XP_004148228.1| PREDICTED: phototropin-1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1405 bits (3636), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 708/910 (77%), Positives = 768/910 (84%), Gaps = 56/910 (6%)
Query: 116 EAGAAAQRAAEWGLVLKTDTETGKPQAVVARTSGGDDPNGKPGTSRRNSNNSVRSSG-EM 174
E G+AA RAAEWGLVLKTDTETGKPQ V RTSGGD+PN K SRR SNNSVRSSG EM
Sbjct: 49 EVGSAALRAAEWGLVLKTDTETGKPQGVGVRTSGGDEPNTKQENSRRTSNNSVRSSGDEM 108
Query: 175 SDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVG 234
S+EGG+E+G+PRVS+ +KDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEV+G
Sbjct: 109 SEEGGRERGIPRVSEDLKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIG 168
Query: 235 RNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVL 294
RNCRFLQGA TDPEDVAKIRE LQ G SYCGRLLNYKKDGTPFWNLLTI+PIKDD+GKVL
Sbjct: 169 RNCRFLQGADTDPEDVAKIREALQAGTSYCGRLLNYKKDGTPFWNLLTISPIKDDDGKVL 228
Query: 295 KFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRSLSE 354
K IGMQVEVSKHTEG KDKM+RPNGLPESLIRYDARQKEMATSSVTELVQA+K+PRSLSE
Sbjct: 229 KLIGMQVEVSKHTEGFKDKMVRPNGLPESLIRYDARQKEMATSSVTELVQAVKRPRSLSE 288
Query: 355 --------STNRPPIIRKSEGGVEEERAG----------ALGRRKSENVPPPRRNSYGGG 396
S NR + RKS GG G + RRKSE+ P GG
Sbjct: 289 YRPRALSESMNRR-LFRKSGGGGGGGEGGGKDEKDKLEPTMVRRKSESAAAPAGRRSQGG 347
Query: 397 CRTSMQRISEVPEKKKQKSGRRSFMGLIGRKSQSTDDHDSFENEIIMEGDDDYESDDE-- 454
R SMQRI+EVP+KK +KS RSFMG++ RKSQS + +SF+ I EG DD D+
Sbjct: 348 SRRSMQRINEVPDKKPKKSSHRSFMGIM-RKSQS-NVEESFD---IEEGSDDENESDDDV 402
Query: 455 RPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREE 514
RPDSVDDKVRQ+EMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREE
Sbjct: 403 RPDSVDDKVRQREMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREE 462
Query: 515 ILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKG 574
ILGRNCRFLQGPETD TV+KIR AIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKG
Sbjct: 463 ILGRNCRFLQGPETDRTTVKKIRDAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKG 522
Query: 575 EVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEAVKELPDANLTPEDLW 634
EVQYFIGVQLDGS+H+EPL N I E+TA+E EKL+K+TAENV+ A +ELPDANLTPEDLW
Sbjct: 523 EVQYFIGVQLDGSQHVEPLSNCIAESTAKEGEKLIKETAENVDLAARELPDANLTPEDLW 582
Query: 635 ANHSKVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSG 694
ANHSK+V PKPHRKDSP W+AIQKILD GEQI L+HF+P+KPLGSGDTGSVHLVELCG+
Sbjct: 583 ANHSKLVQPKPHRKDSPSWQAIQKILDGGEQIGLKHFKPVKPLGSGDTGSVHLVELCGTD 642
Query: 695 QYFAMKAMDKGVMLNRNK---------------------------TKTHVCLITDYCPGG 727
QYFAMKAMDKGVMLNRNK TKTHVCLITDYCPGG
Sbjct: 643 QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFLPALYASFQTKTHVCLITDYCPGG 702
Query: 728 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTD 787
ELFLLLDRQPTKV+KEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ NGHV+LTD
Sbjct: 703 ELFLLLDRQPTKVIKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQSNGHVALTD 762
Query: 788 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG 847
FDLSCLTSCKPQLLLP NEKK++ K QQ P+FMAEPMRASNSFVGTEEYIAPEII GAG
Sbjct: 763 FDLSCLTSCKPQLLLPAANEKKKQSKTQQTPIFMAEPMRASNSFVGTEEYIAPEIITGAG 822
Query: 848 HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRL 907
HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFP S SL+AKQL++RL
Sbjct: 823 HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPRSISASLNAKQLIFRL 882
Query: 908 LHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLF-ATDTEKEY-KVVDP 965
LHRDPK+RLGS EGA+EIK+HPFF+GVNWALVRCMNPPEL+APLF TD EK+ K D
Sbjct: 883 LHRDPKNRLGSREGASEIKRHPFFRGVNWALVRCMNPPELEAPLFQTTDGEKDANKASDF 942
Query: 966 GMQDLQQNVF 975
++L+ +VF
Sbjct: 943 DPKELELSVF 952
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|60099454|dbj|BAD89966.1| phototropin [Phaseolus vulgaris] | Back alignment and taxonomy information |
|---|
Score = 1398 bits (3618), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 703/991 (70%), Positives = 792/991 (79%), Gaps = 56/991 (5%)
Query: 21 RDSRGSLEVFNPSTFSTRPTNPVFRP---QPTWQTWMEQRESPEPEHAKLNSKSSRAEEI 77
RD RGSLEVFNPS+ S PV P Q TW+TW++ R +PE + + +E+
Sbjct: 6 RDQRGSLEVFNPSSSSYSNEKPVISPLRTQSTWKTWVDSRVEEQPEKQQ---RGGGPDEV 62
Query: 78 T--SWMALKDPAPQKPSLPPLIQKMTNDQEKSTVTKQLSGEAGAAAQRAAEWGLVLKTDT 135
T SWMALKD P PS Q + V + E G AA+RAAEWGLVLKTDT
Sbjct: 63 TATSWMALKDSTPPPPS-----------QTLAAVLGEPPAEVGNAAKRAAEWGLVLKTDT 111
Query: 136 ETGKPQAVVARTSGGDDPNGK-PGTSRRNSNNSVRSSGEMSDEGGKEKG-LPRVSDIVKD 193
ETGKPQ V +TSGG++P K G SRR+S NSVRSSGE SD+G + +G +PRVS+ ++D
Sbjct: 112 ETGKPQGVAVQTSGGEEPGVKVTGGSRRDSGNSVRSSGESSDDGREYRGGIPRVSEDLRD 171
Query: 194 ALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKI 253
ALS FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEV+GRNCRF+QGA TDP+DVAKI
Sbjct: 172 ALSAFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFMQGADTDPDDVAKI 231
Query: 254 RETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDK 313
RE LQ GQ+YCGRLLNYKKDGTPFWNLLTIAPIKD +G+VLKFIGMQVEVSKHTEG K+
Sbjct: 232 REALQTGQTYCGRLLNYKKDGTPFWNLLTIAPIKDHDGRVLKFIGMQVEVSKHTEGNKEN 291
Query: 314 MLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRSLSESTNRPPIIRKSEGGVEEER 373
MLRPNGLPESLIRYDARQKE A SSV+EL+ A+++PR+LSES RP I + + G ++++
Sbjct: 292 MLRPNGLPESLIRYDARQKEKANSSVSELLLAVRRPRALSESGGRPLIRKSASGDDDQDK 351
Query: 374 AGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFMGLIGRKSQSTDD 433
RRKSE+V RR S+ G RTSM++I+E+PE K + S RRSFMG I RK+QS
Sbjct: 352 PEKSSRRKSESVASFRRKSHAGD-RTSMEKITEIPENKHKTSRRRSFMGFI-RKNQSK-- 407
Query: 434 HDSFENEIIMEGDDDYESDD-ERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRL 492
SF +E ++EG + +D ER S D KV++KE RKG+DLATTLERIEKNFVITDPRL
Sbjct: 408 FGSFNDEAVIEGSSESSDEDGERSGSFDGKVQRKEKRKGLDLATTLERIEKNFVITDPRL 467
Query: 493 PDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 552
PDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIR AID QTDVTVQLIN
Sbjct: 468 PDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDTQTDVTVQLIN 527
Query: 553 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQT 612
YTK+GKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS+H+EPL N I E TA+E EKLVK T
Sbjct: 528 YTKTGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNRIAENTAKEGEKLVKDT 587
Query: 613 AENVNEAVKELPDANLTPEDLWANHSKVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFR 672
AENV++A++ELPDANL PEDLW NHSKVVHPKPHR+D WKAIQKIL+SGEQI L HF+
Sbjct: 588 AENVDDALRELPDANLKPEDLWMNHSKVVHPKPHRRDEAAWKAIQKILESGEQIGLNHFK 647
Query: 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK-------------------- 712
P+KPLGSGDTGSV+LVEL +GQYFAMKAM+KG+MLNRNK
Sbjct: 648 PVKPLGSGDTGSVYLVELGETGQYFAMKAMEKGIMLNRNKVHRACTEREILDMLDHPFLP 707
Query: 713 -------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGI 765
TKTHVCLITDYC GGELFLLLDRQP KVL+EDAVRFYAAEVVVALEYLHCQGI
Sbjct: 708 ALYASFQTKTHVCLITDYCSGGELFLLLDRQPAKVLREDAVRFYAAEVVVALEYLHCQGI 767
Query: 766 IYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPM 825
IYRDLKPENVLLQ +GHVSLTDFDLSCLTSCKPQLL+P+ NEKK+ KG Q P+FMAEPM
Sbjct: 768 IYRDLKPENVLLQSSGHVSLTDFDLSCLTSCKPQLLVPSINEKKKAQKGHQPPIFMAEPM 827
Query: 826 RASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH 885
RASNSFVGTEEYIAPEII G+GH+SAVDWWALGILLYEM +GYTPFRGKTRQ+TF NILH
Sbjct: 828 RASNSFVGTEEYIAPEIITGSGHSSAVDWWALGILLYEMFFGYTPFRGKTRQRTFTNILH 887
Query: 886 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPP 945
KDLKFP S S AKQLMYRLL+RDPKSRLGS EGANEIK HPFF+GVNWALVRC PP
Sbjct: 888 KDLKFPKSKQVSFSAKQLMYRLLNRDPKSRLGSREGANEIKNHPFFRGVNWALVRCTKPP 947
Query: 946 ELDAPLF-ATDTEKEYKVVDPGMQDLQQNVF 975
ELDAPLF T EKE D +++ NVF
Sbjct: 948 ELDAPLFDTTRGEKEANFEDQVQEEM--NVF 976
|
Source: Phaseolus vulgaris Species: Phaseolus vulgaris Genus: Phaseolus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15231245|ref|NP_190164.1| non-specific serine/threonine protein kinase [Arabidopsis thaliana] gi|79314333|ref|NP_001030814.1| non-specific serine/threonine protein kinase [Arabidopsis thaliana] gi|25090817|sp|O48963.1|PHOT1_ARATH RecName: Full=Phototropin-1; AltName: Full=Non-phototropic hypocotyl protein 1; AltName: Full=Root phototropism protein 1 gi|13430612|gb|AAK25928.1|AF360218_1 putative nonphototropic hypocotyl 1 protein [Arabidopsis thaliana] gi|2832241|gb|AAC01753.1| nonphototropic hypocotyl 1 [Arabidopsis thaliana] gi|7019644|emb|CAB75791.1| nonphototropic hypocotyl 1 [Arabidopsis thaliana] gi|14532876|gb|AAK64120.1| putative nonphototropic hypocotyl 1 protein [Arabidopsis thaliana] gi|332644551|gb|AEE78072.1| non-specific serine/threonine protein kinase [Arabidopsis thaliana] gi|332644552|gb|AEE78073.1| non-specific serine/threonine protein kinase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1397 bits (3616), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 717/1014 (70%), Positives = 812/1014 (80%), Gaps = 62/1014 (6%)
Query: 5 EKSPKQSSKACESPLSRDSRGSLEVFNPSTFSTRPTNPVFRPQP-TWQTWMEQRES---P 60
E + K S+K L RD+RGSLEVFNPST TRP NPVFRP+P WQ + R + P
Sbjct: 2 EPTEKPSTKPSSRTLPRDTRGSLEVFNPSTQLTRPDNPVFRPEPPAWQNLSDPRGTSPQP 61
Query: 61 EPEHAKLNSKSSRAEE----ITSWMALKDPAPQKPSLPPLIQKMTNDQEKSTVTKQLSGE 116
P+ S R+++ TSWMALKDP+P+ S +K+ ++
Sbjct: 62 RPQQEPAPSNPVRSDQEIAVTTSWMALKDPSPETIS------------KKTITAEKPQKS 109
Query: 117 AGAAAQRAAEWGLVLKTDTETGKPQAVVARTSGG--DDPNGKPGTSRRNSNNSVRSSGEM 174
A AA QRAAEWGLVLKTDT+TGKPQ V R SGG +DPNGK TS+RNS NS RSSGEM
Sbjct: 110 AVAAEQRAAEWGLVLKTDTKTGKPQGVGVRNSGGTENDPNGKKTTSQRNSQNSCRSSGEM 169
Query: 175 SDEG--GKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEV 232
SD G G+PRVS+ +KDALSTFQQTFVVSDATKPDYPIMYASAGFF MTGYTSKEV
Sbjct: 170 SDGDVPGGRSGIPRVSEDLKDALSTFQQTFVVSDATKPDYPIMYASAGFFNMTGYTSKEV 229
Query: 233 VGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGK 292
VGRNCRFLQG+GTD +++AKIRETL G +YCGR+LNYKKDGT FWNLLTIAPIKD+ GK
Sbjct: 230 VGRNCRFLQGSGTDADELAKIRETLAAGNNYCGRILNYKKDGTSFWNLLTIAPIKDESGK 289
Query: 293 VLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRSL 352
VLKFIGMQVEVSKHTEGAK+K LRPNGLPESLIRYDARQK+MAT+SVTELV+A+K+PR+L
Sbjct: 290 VLKFIGMQVEVSKHTEGAKEKALRPNGLPESLIRYDARQKDMATNSVTELVEAVKRPRAL 349
Query: 353 SESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKK 412
SESTN P + KSE +E RR SENV P R + GGG R SMQRI+E+PEKK
Sbjct: 350 SESTNLHPFMTKSES---DELPKKPARRMSENVVPSGRRNSGGGRRNSMQRINEIPEKKS 406
Query: 413 QKSGRRSFMGLIGRKSQSTDDHDSFENEIIMEG--DDDYESDDERPDSVDDKVRQKEMRK 470
+KS SFMG I +KS+S D+ S ++ I G DD+ DERP+SVDDKVRQKEMRK
Sbjct: 407 RKSSL-SFMG-IKKKSESLDE--SIDDGFIEYGEEDDEISDRDERPESVDDKVRQKEMRK 462
Query: 471 GIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDP 530
GIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETD
Sbjct: 463 GIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDL 522
Query: 531 ATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHL 590
TV+KIR AIDNQT+VTVQLINYTKSGKKFWN+FHLQPMRDQKGEVQYFIGVQLDGS+H+
Sbjct: 523 TTVKKIRNAIDNQTEVTVQLINYTKSGKKFWNIFHLQPMRDQKGEVQYFIGVQLDGSKHV 582
Query: 591 EPLRNSIPEATAEESEKLVKQTAENVNEAVKELPDANLTPEDLWANHSKVVHPKPHRKDS 650
EP+RN I E +E E LVK+TA N++EAV+ELPDAN+TPEDLWANHSKVVH KPHRKDS
Sbjct: 583 EPVRNVIEETAVKEGEDLVKKTAVNIDEAVRELPDANMTPEDLWANHSKVVHCKPHRKDS 642
Query: 651 PPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR 710
PPW AIQK+L+SGE I L+HF+P+KPLGSGDTGSVHLVEL G+ Q FAMKAMDK VMLNR
Sbjct: 643 PPWIAIQKVLESGEPIGLKHFKPVKPLGSGDTGSVHLVELVGTDQLFAMKAMDKAVMLNR 702
Query: 711 NK---------------------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKE 743
NK TKTH+CLITDY PGGELF+LLDRQP KVLKE
Sbjct: 703 NKVHRARAEREILDLLDHPFLPALYASFQTKTHICLITDYYPGGELFMLLDRQPRKVLKE 762
Query: 744 DAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803
DAVRFYAA+VVVALEYLHCQGIIYRDLKPENVL+QGNG +SL+DFDLSCLTSCKPQLL+P
Sbjct: 763 DAVRFYAAQVVVALEYLHCQGIIYRDLKPENVLIQGNGDISLSDFDLSCLTSCKPQLLIP 822
Query: 804 TTNE--KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 861
+ +E KK++ K QQ P+FMAEPMRASNSFVGTEEYIAPEII+GAGHTSAVDWWALGIL+
Sbjct: 823 SIDEKKKKKQQKSQQTPIFMAEPMRASNSFVGTEEYIAPEIISGAGHTSAVDWWALGILM 882
Query: 862 YEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 921
YEMLYGYTPFRGKTRQKTF N+L KDLKFP+S P SL KQL++RLL RDPK RLG EG
Sbjct: 883 YEMLYGYTPFRGKTRQKTFTNVLQKDLKFPASIPASLQVKQLIFRLLQRDPKKRLGCFEG 942
Query: 922 ANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDTEKEYKVVDPGMQDLQQNVF 975
ANE+K+H FFKG+NWAL+RC NPPEL+ P+F+ + E KVVDP ++DLQ NVF
Sbjct: 943 ANEVKQHSFFKGINWALIRCTNPPELETPIFSGEAENGEKVVDPELEDLQTNVF 996
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356542583|ref|XP_003539746.1| PREDICTED: phototropin-1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1394 bits (3608), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 707/991 (71%), Positives = 802/991 (80%), Gaps = 55/991 (5%)
Query: 21 RDSRGSLEVFNPST-FST-RPTNPVFRPQPTWQTWMEQRESPEPEHAKLNSKSSRAEEIT 78
RD RGSLEVFNPS+ +ST + N R Q TW+TW++ E PE + + ++ T
Sbjct: 6 RDQRGSLEVFNPSSSYSTEKSVNSPVRVQSTWKTWID--ELPEQQQQQQCGGTNEVT-AT 62
Query: 79 SWMALKDPAPQKPSLPPLIQKMTNDQEKSTVTKQLSGEAGAAAQRAAEWGLVLKTDTETG 138
SWMALKD AP P+L ++ + + GE G AA+RAAEWGLVLKTDTETG
Sbjct: 63 SWMALKDSAPPPPTLAAVLGESLS---------AAVGEVGNAAKRAAEWGLVLKTDTETG 113
Query: 139 KPQAVVARTSGGDDPNGK-PGTSRRNSNNSVRSSGEMSDEGGKEKG-LPRVSDIVKDALS 196
KPQ V RTSGG++P+ K G SRR+S+NSVRSSGE SD+G + +G +PRVS+ ++DALS
Sbjct: 114 KPQGVKVRTSGGEEPSAKVTGGSRRDSSNSVRSSGESSDDGREYRGGIPRVSEDLRDALS 173
Query: 197 TFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRET 256
FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEV+GRNCRF+QGA TDP+DVAKIRE
Sbjct: 174 AFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFMQGADTDPDDVAKIREA 233
Query: 257 LQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLR 316
LQ+G +YCGRLLNYKKDGTPFWNLLTIAPIKDD+G+VLKFIGMQVEVSKHTEGAK+KMLR
Sbjct: 234 LQSGSTYCGRLLNYKKDGTPFWNLLTIAPIKDDDGRVLKFIGMQVEVSKHTEGAKEKMLR 293
Query: 317 PNGLPESLIRYDARQKEMATSSVTELVQAMKKPRSLSESTNRPPIIRKSEGG--VEEERA 374
PNGLPESLIRYDARQKE A S+V+EL+ A+++PR+LSES RP +I+KS G +++
Sbjct: 294 PNGLPESLIRYDARQKEKANSTVSELLLAVRRPRALSESAGRP-MIKKSASGDDAQDKPP 352
Query: 375 GALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFMGLIGRKSQSTDDH 434
RRKSE+V RR S+ G R+SM+RI+E+PEKK + S RRSFMG I RKSQS +
Sbjct: 353 EKSSRRKSESVASFRRKSHAGD-RSSMERITELPEKKHKSSRRRSFMGFI-RKSQS--NF 408
Query: 435 DSFENEIIMEGDDDYESDDE-RPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLP 493
SF +E ++E + +D+ RP+S D KV++KE RKG+DLATTLERIEKNFVITDPRLP
Sbjct: 409 GSFNDEAVVENSSESSDEDDERPESFDGKVQKKEKRKGLDLATTLERIEKNFVITDPRLP 468
Query: 494 DNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553
DNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIR AIDNQTDVTVQLINY
Sbjct: 469 DNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDNQTDVTVQLINY 528
Query: 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTA 613
TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS+H+EPL N I + TA+E E+LVK TA
Sbjct: 529 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNRIADDTAKEGEQLVKDTA 588
Query: 614 ENVNEAVKELPDANLTPEDLWANHSKVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRP 673
ENV++A++ELPDAN+ PEDLW NHSKVVHPKPHR+D WKAIQ+IL+SGEQI L HFRP
Sbjct: 589 ENVDDALRELPDANMKPEDLWMNHSKVVHPKPHRRDEAAWKAIQQILNSGEQIGLNHFRP 648
Query: 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK--------------------- 712
+KPLGSGDTGSV+LVEL +G YFAMKAM+KGVMLNRNK
Sbjct: 649 VKPLGSGDTGSVYLVELGETGHYFAMKAMEKGVMLNRNKVHRACTEREILDMLDHPFLPA 708
Query: 713 ------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGII 766
TKTHVCLITDYC GGELFLLLDRQP KVL+EDAVRFYAAEVVVALEYLHCQGII
Sbjct: 709 LYASFQTKTHVCLITDYCSGGELFLLLDRQPAKVLREDAVRFYAAEVVVALEYLHCQGII 768
Query: 767 YRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMR 826
YRDLKPENVLLQ +GHVSLTDFDLSCLTSCKPQLL+P NEKK+ KG P+FMAEPMR
Sbjct: 769 YRDLKPENVLLQSSGHVSLTDFDLSCLTSCKPQLLVPVINEKKKAQKGPHAPIFMAEPMR 828
Query: 827 ASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 886
ASNSFVGTEEYIAPEII G+GHTSAVDWWALGILLYEM YGYTPFRGKTRQ+TF NILHK
Sbjct: 829 ASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMFYGYTPFRGKTRQRTFTNILHK 888
Query: 887 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPE 946
DLKFP S S AKQLMYRLL+RDPKSRLGS EGANEIK HPFF+GVNWALVRC PPE
Sbjct: 889 DLKFPKSKQVSFSAKQLMYRLLNRDPKSRLGSREGANEIKNHPFFRGVNWALVRCTKPPE 948
Query: 947 LDAPLFATDT--EKEYKVVDPGMQDLQQNVF 975
LDAPL T EKE K + +D+ NVF
Sbjct: 949 LDAPLLETTEGGEKEAKFENQVQEDM--NVF 977
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 975 | ||||||
| TAIR|locus:2102674 | 996 | PHOT1 "phototropin 1" [Arabido | 0.705 | 0.690 | 0.681 | 0.0 | |
| UNIPROTKB|Q8H935 | 963 | Vfphot1a "Phototropin" [Vicia | 0.68 | 0.688 | 0.620 | 0.0 | |
| UNIPROTKB|Q2QYY8 | 921 | PHOT1A "Phototropin-1A" [Oryza | 0.832 | 0.881 | 0.650 | 4.2e-303 | |
| UNIPROTKB|Q2RBR1 | 921 | PHOT1B "Phototropin-1B" [Oryza | 0.832 | 0.881 | 0.649 | 8.6e-303 | |
| TAIR|locus:2155821 | 915 | PHOT2 "phototropin 2" [Arabido | 0.367 | 0.391 | 0.581 | 7e-274 | |
| UNIPROTKB|Q9ST27 | 907 | PHOT2 "Phototropin-2" [Oryza s | 0.564 | 0.606 | 0.592 | 1.1e-264 | |
| TAIR|locus:2174885 | 499 | AT5G40030 [Arabidopsis thalian | 0.165 | 0.322 | 0.493 | 5.3e-77 | |
| TAIR|locus:2178388 | 498 | D6PK "D6 protein kinase" [Arab | 0.143 | 0.281 | 0.531 | 6.4e-76 | |
| UNIPROTKB|Q5I6E9 | 700 | Adi3 "AvrPto-dependent Pto-int | 0.186 | 0.26 | 0.471 | 1.2e-73 | |
| POMBASE|SPAC4G8.05 | 566 | ppk14 "serine/threonine protei | 0.244 | 0.420 | 0.506 | 1.5e-71 |
| TAIR|locus:2102674 PHOT1 "phototropin 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2373 (840.4 bits), Expect = 0., Sum P(2) = 0.
Identities = 493/723 (68%), Positives = 553/723 (76%)
Query: 5 EKSPKQSSKACESPLSRDSRGSLEVFNPSTFSTRPTNPVFRPQP-TWQTWMEQRES---P 60
E + K S+K L RD+RGSLEVFNPST TRP NPVFRP+P WQ + R + P
Sbjct: 2 EPTEKPSTKPSSRTLPRDTRGSLEVFNPSTQLTRPDNPVFRPEPPAWQNLSDPRGTSPQP 61
Query: 61 EPEHAKLNSKSSRAE-EI---TSWMALKDPAPQKPSLPPLIQKMTNDQEKSTVTKQLSXX 116
P+ S R++ EI TSWMALKDP+P+ I K T EK Q S
Sbjct: 62 RPQQEPAPSNPVRSDQEIAVTTSWMALKDPSPET------ISKKTITAEKP----QKSAV 111
Query: 117 XXXXXXXXXXWGLVLKTDTETGKPQAVVARTSGG--DDPNGKPGTXXXXXXXXXXXXGEM 174
WGLVLKTDT+TGKPQ V R SGG +DPNGK T GEM
Sbjct: 112 AAEQRAAE--WGLVLKTDTKTGKPQGVGVRNSGGTENDPNGKKTTSQRNSQNSCRSSGEM 169
Query: 175 SD---EGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKE 231
SD GG+ G+PRVS+ +KDALSTFQQTFVVSDATKPDYPIMYASAGFF MTGYTSKE
Sbjct: 170 SDGDVPGGRS-GIPRVSEDLKDALSTFQQTFVVSDATKPDYPIMYASAGFFNMTGYTSKE 228
Query: 232 VVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEG 291
VVGRNCRFLQG+GTD +++AKIRETL G +YCGR+LNYKKDGT FWNLLTIAPIKD+ G
Sbjct: 229 VVGRNCRFLQGSGTDADELAKIRETLAAGNNYCGRILNYKKDGTSFWNLLTIAPIKDESG 288
Query: 292 KVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRS 351
KVLKFIGMQVEVSKHTEGAK+K LRPNGLPESLIRYDARQK+MAT+SVTELV+A+K+PR+
Sbjct: 289 KVLKFIGMQVEVSKHTEGAKEKALRPNGLPESLIRYDARQKDMATNSVTELVEAVKRPRA 348
Query: 352 LSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKK 411
LSESTN P + KSE +E RR SENV P R + GGG R SMQRI+E+PEKK
Sbjct: 349 LSESTNLHPFMTKSES---DELPKKPARRMSENVVPSGRRNSGGGRRNSMQRINEIPEKK 405
Query: 412 KQKSGRRSFMGLIGRKSQSTDDHDSFENEIIMXXXXXXXXXXXXXX--SVDDKVRQKEMR 469
+KS SFMG I +KS+S D+ S ++ I SVDDKVRQKEMR
Sbjct: 406 SRKSSL-SFMG-IKKKSESLDE--SIDDGFIEYGEEDDEISDRDERPESVDDKVRQKEMR 461
Query: 470 KGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETD 529
KGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETD
Sbjct: 462 KGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETD 521
Query: 530 PATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEH 589
TV+KIR AIDNQT+VTVQLINYTKSGKKFWN+FHLQPMRDQKGEVQYFIGVQLDGS+H
Sbjct: 522 LTTVKKIRNAIDNQTEVTVQLINYTKSGKKFWNIFHLQPMRDQKGEVQYFIGVQLDGSKH 581
Query: 590 LEPLRNSIPEATAEESEKLVKQTAENVNEAVKELPDANLTPEDLWANHSKVVHPKPHRKD 649
+EP+RN I E +E E LVK+TA N++EAV+ELPDAN+TPEDLWANHSKVVH KPHRKD
Sbjct: 582 VEPVRNVIEETAVKEGEDLVKKTAVNIDEAVRELPDANMTPEDLWANHSKVVHCKPHRKD 641
Query: 650 SPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN 709
SPPW AIQK+L+SGE I L+HF+P+KPLGSGDTGSVHLVEL G+ Q FAMKAMDK VMLN
Sbjct: 642 SPPWIAIQKVLESGEPIGLKHFKPVKPLGSGDTGSVHLVELVGTDQLFAMKAMDKAVMLN 701
Query: 710 RNK 712
RNK
Sbjct: 702 RNK 704
|
|
| UNIPROTKB|Q8H935 Vfphot1a "Phototropin" [Vicia faba (taxid:3906)] | Back alignment and assigned GO terms |
|---|
Score = 2057 (729.2 bits), Expect = 0., Sum P(2) = 0.
Identities = 429/691 (62%), Positives = 494/691 (71%)
Query: 32 PSTFSTRPTNPVFRPQPTWQTWMEQ-RESPEPEHAKLNSKSSRAEEITSWM--ALKDPAP 88
P T R + VF P + +P P ++ SSR E + D P
Sbjct: 3 PFTRDHRGSLEVFNPSSSETNGTPNPNPNPNPSNSWNTGTSSRGTEAPPLRDSIISDEVP 62
Query: 89 QKPSLPPLIQKMTNDQEKSTVTKQLSXXXXXXXXXXXXWGLVLKTDTETGKPQAVVARTS 148
S L K T KS + ++ WGLVLKTD+ETGKPQ V R S
Sbjct: 63 TATSWMAL--KETTPSPKSGESGSVAEQRAAE------WGLVLKTDSETGKPQGVGVRGS 114
Query: 149 GGDDPNGKPGTXXXXXXXXXXXXGEMSDEGGKE-KGLPRVSDIVKDALSTFQQTFVVSDA 207
GG G GE SD+G + +G+PRVS+ ++DALS FQQTFVVSDA
Sbjct: 115 GGG------GGSRRDSNNSVRSSGESSDDGREGGRGIPRVSEDLRDALSAFQQTFVVSDA 168
Query: 208 TKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRL 267
TKPDYPIMYASAGFF MTGYTSKEV+GRNCRF+QGA TDP DVAKIRE L G SYCGRL
Sbjct: 169 TKPDYPIMYASAGFFSMTGYTSKEVIGRNCRFMQGADTDPNDVAKIREALAAGTSYCGRL 228
Query: 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRY 327
LNYKKDGT FWNLLTIAPIKD+ GK+LK IGMQVEVSKHTEG K+KMLRPNGLPESLIRY
Sbjct: 229 LNYKKDGTTFWNLLTIAPIKDEHGKILKLIGMQVEVSKHTEGTKEKMLRPNGLPESLIRY 288
Query: 328 DARQKEMATSSVTELVQAM-KKPRSLSESTNRPPIIRKSEGGVEEE----RAGALGRRKS 382
DARQKE A SSVTELV+A+ K+PRSLSES NR P +K G + + + R+
Sbjct: 289 DARQKEKANSSVTELVEAVSKRPRSLSESANRLPFNKKPTNGSNDHATPPNSESSSRKSG 348
Query: 383 ENVPPPRRNSYGG-GCRTSMQRISEVPEKKKQKSGRRSFMGLIGRKSQSTDDHDSFENEI 441
+ RR S+ G G SM I+E+PE KS RRSFMG + RKS S ++ F +E
Sbjct: 349 STLRSFRRKSHSGAGNSNSMHPITELPENNN-KSRRRSFMGFM-RKSLSNNER--FNHEQ 404
Query: 442 IMXXXXXXXXXXXXXXSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFAS 501
++ + +++E RKG DLATTLERIEKNFVITDPRLPDNPIIFAS
Sbjct: 405 VIDRNSSEDEDRLDSFDEQNIAQKREKRKGFDLATTLERIEKNFVITDPRLPDNPIIFAS 464
Query: 502 DSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFW 561
DSFLELTEYSREEILGRNCRFLQGPETDPATV+KIR AIDNQT+VTVQLINYTK+GKKFW
Sbjct: 465 DSFLELTEYSREEILGRNCRFLQGPETDPATVKKIRYAIDNQTEVTVQLINYTKTGKKFW 524
Query: 562 NLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEAVK 621
NLFHLQPMRDQKGEVQYFIGVQLDGS+H+EPL N I E TA+E E LVK+TAENV++A++
Sbjct: 525 NLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNGIAEDTAKEGENLVKKTAENVDDALR 584
Query: 622 ELPDANLTPEDLWANHSKVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGD 681
ELPDAN+ PEDLW NHSKVVHPKPHR++ W+AIQKI++SGEQI L+HF+PIKPLGSGD
Sbjct: 585 ELPDANMKPEDLWMNHSKVVHPKPHRREDSAWRAIQKIMESGEQIGLKHFKPIKPLGSGD 644
Query: 682 TGSVHLVELCGSGQYFAMKAMDKGVMLNRNK 712
TGSVHLVELCG+ +FAMKAMDKGVM NRNK
Sbjct: 645 TGSVHLVELCGTDHHFAMKAMDKGVMPNRNK 675
|
|
| UNIPROTKB|Q2QYY8 PHOT1A "Phototropin-1A" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 2855 (1010.1 bits), Expect = 4.2e-303, Sum P(2) = 4.2e-303
Identities = 569/875 (65%), Positives = 669/875 (76%)
Query: 127 WGLVLKTDTETGKPQAVVARTSGGDDPNGKPGTXXXXXXXXXXXXGEMSDEGGKEKGLPR 186
WGLVL+TD TG PQ V AR S G + + +PR
Sbjct: 78 WGLVLQTDHHTGLPQGVSARPSSGS---------------ARTSSEDNPQQQQSAAAIPR 122
Query: 187 VSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTD 246
VS+ ++ ALS FQQTFVVSDAT P++PIMYASAGFF MTGYTSKEVVGRNCRFLQG+GTD
Sbjct: 123 VSEELRAALSAFQQTFVVSDATHPNHPIMYASAGFFNMTGYTSKEVVGRNCRFLQGSGTD 182
Query: 247 PEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKH 306
P ++ KIR++L NG +YCGR+LNYKKDGTPFWNLLTIAPIKD++G++LKFIGMQVEVSK+
Sbjct: 183 PHEIDKIRQSLANGSNYCGRILNYKKDGTPFWNLLTIAPIKDEDGRLLKFIGMQVEVSKY 242
Query: 307 TEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRSLSESTNRPPIIRKSE 366
TEG KD ++RPNGL ESLI+YDARQK+ A SSV+EL+ A+K PRSLSES+N + RKS+
Sbjct: 243 TEGKKDTVVRPNGLSESLIKYDARQKDHARSSVSELLLALKNPRSLSESSNNT-LKRKSQ 301
Query: 367 GGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEK--KKQKSGRRSFMGLI 424
+ +R SE+ RRNS G R+S+Q+I+EVP++ + +KSG R+FMG +
Sbjct: 302 ESLSMSMTEVPSKRSSES--GSRRNSRSG-TRSSLQKINEVPDQGNRTRKSGLRAFMGFL 358
Query: 425 GRKSQSTDDHDSFENEIIMXXXXXXXXXXXXXX--SVDDKVRQKEMRKGIDLATTLERIE 482
G H S E ++ S +D+ R+KEMR+GIDLATTLERIE
Sbjct: 359 GM------GHGSVEKNMLKPRDEDPLIDSDDERPESFEDEFRRKEMRRGIDLATTLERIE 412
Query: 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDN 542
KNFVITDPRLPDNPIIFASDSFL+LTEY+REEILGRNCRFLQGPETD ATVRKIR AIDN
Sbjct: 413 KNFVITDPRLPDNPIIFASDSFLQLTEYNREEILGRNCRFLQGPETDRATVRKIRDAIDN 472
Query: 543 QTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATA 602
Q +VTVQLINYTKSGKKFWNLFHLQPMRDQKG+VQYFIGVQLDG+EH++ + A
Sbjct: 473 QAEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVQ-------DDAA 525
Query: 603 EESEKLVKQTAENVNEAVKELPDANLTPEDLWANHSKVVHPKPHRKDSPPWKAIQKILDS 662
+E LVK+TA+N++EA KELPDANL PEDLWANHSKVV P PH KD+ W+AIQK+L+S
Sbjct: 526 KEGVVLVKKTADNIDEAAKELPDANLRPEDLWANHSKVVLPNPHMKDTASWRAIQKVLES 585
Query: 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK---------- 712
GE I L+HFRP+KPLGSGDTGSVHLVEL +G+YFAMKAMDK +MLNRNK
Sbjct: 586 GESIGLKHFRPVKPLGSGDTGSVHLVELLNTGEYFAMKAMDKSIMLNRNKVHRATAERQI 645
Query: 713 -----------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVV 755
TKTH+CLITDYCPGGELF+LLD QP KVL EDAVRFYAAEVVV
Sbjct: 646 LDLLDHPFLPTLYASFQTKTHICLITDYCPGGELFVLLDNQPLKVLHEDAVRFYAAEVVV 705
Query: 756 ALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQ 815
ALEYLHCQGIIYRDLKPEN+LL +GH+SLTDFDLSCLTSC+PQ+ LP ++K+ K
Sbjct: 706 ALEYLHCQGIIYRDLKPENILLHRDGHISLTDFDLSCLTSCRPQVFLPEDADEKKGRKNG 765
Query: 816 QNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 875
P+F AEPMRASNSFVGTEEYIAPEII GAGHTSAVDWWALGILLYEMLYGYTPFRGKT
Sbjct: 766 SYPIFFAEPMRASNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 825
Query: 876 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935
RQ+TFANILHKD++FP+S SL A+QLMYRLLHRDP +RLGS+EGANEIK HPFF+G+N
Sbjct: 826 RQRTFANILHKDIRFPASISVSLAARQLMYRLLHRDPANRLGSYEGANEIKGHPFFRGIN 885
Query: 936 WALVRCMNPPELDAPLFATDTEKEYKVVDPGMQDL 970
W L+R PP+L+ PLF+ D ++ +V D+
Sbjct: 886 WPLIRATAPPKLEIPLFSKDDMEKKGLVTNNRTDM 920
|
|
| UNIPROTKB|Q2RBR1 PHOT1B "Phototropin-1B" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 2852 (1009.0 bits), Expect = 8.6e-303, Sum P(2) = 8.6e-303
Identities = 568/875 (64%), Positives = 670/875 (76%)
Query: 127 WGLVLKTDTETGKPQAVVARTSGGDDPNGKPGTXXXXXXXXXXXXGEMSDEGGKEKGLPR 186
WGLVL+TD TG PQ V AR S G + + +PR
Sbjct: 78 WGLVLQTDHHTGLPQGVSARPSSGS---------------ARTSSEDNPQQQQSAAAIPR 122
Query: 187 VSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTD 246
VS+ ++ ALS FQQTFVVSDAT P++PIMYASAGFF MTGYTSKEVVGRNCRFLQG+GTD
Sbjct: 123 VSEELRAALSVFQQTFVVSDATHPNHPIMYASAGFFNMTGYTSKEVVGRNCRFLQGSGTD 182
Query: 247 PEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKH 306
P ++ KIR++L NG +YCGR+LNYKKDGTPFWNLLTIAPIKD++G++LKFIGMQVEVSK+
Sbjct: 183 PHEIDKIRQSLANGSNYCGRILNYKKDGTPFWNLLTIAPIKDEDGRLLKFIGMQVEVSKY 242
Query: 307 TEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRSLSESTNRPPIIRKSE 366
TEG KD ++RPNGL ESLI+YDARQK+ A SSV+EL+ A+K PRSLSES+N + RKS+
Sbjct: 243 TEGKKDTVVRPNGLSESLIKYDARQKDHARSSVSELLLALKNPRSLSESSNNT-LKRKSQ 301
Query: 367 GGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEK--KKQKSGRRSFMGLI 424
+ + +R SE+ RRNS G R+S+Q+I+EVP++ + +KSG R+FMG +
Sbjct: 302 ESLSMSMSEVPSKRSSES--GSRRNSRSG-TRSSLQKINEVPDQVNRTRKSGLRAFMGFL 358
Query: 425 GRKSQSTDDHDSFENEIIMXXXXXXXXXXXXXX--SVDDKVRQKEMRKGIDLATTLERIE 482
G H S E ++ S +D+ R+KEMR+GIDLATTLERIE
Sbjct: 359 GM------GHGSVEKNMLKPRDEDPLIDSDDERPESFEDEFRRKEMRRGIDLATTLERIE 412
Query: 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDN 542
KNFVITDPRLPDNPIIFASDSFL+LTEY+REEILGRNCRFLQGPETD ATVRKIR AIDN
Sbjct: 413 KNFVITDPRLPDNPIIFASDSFLQLTEYNREEILGRNCRFLQGPETDRATVRKIRDAIDN 472
Query: 543 QTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATA 602
Q +VTVQLINYTKSGKKFWNLFHLQPMRDQKG+VQYFIGVQLDG+EH++ + A
Sbjct: 473 QAEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVQ-------DDAA 525
Query: 603 EESEKLVKQTAENVNEAVKELPDANLTPEDLWANHSKVVHPKPHRKDSPPWKAIQKILDS 662
+E LVK+TA+N++EA KELPDANL P+DLWANHSKVV P PH KD+ W+AIQK+L+S
Sbjct: 526 KEGVVLVKKTADNIDEAAKELPDANLRPKDLWANHSKVVLPNPHMKDTASWRAIQKVLES 585
Query: 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK---------- 712
GE I L+HFRP+KPLGSGDTGSVHLVEL +G+YFAMKAMDK +MLNRNK
Sbjct: 586 GESIGLKHFRPVKPLGSGDTGSVHLVELLNTGEYFAMKAMDKSIMLNRNKVHRATAERQI 645
Query: 713 -----------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVV 755
TKTH+CLITDYCPGGELF+LLD QP KVL EDAVRFYAAEVVV
Sbjct: 646 LDLLDHPFLPTLYASFQTKTHICLITDYCPGGELFVLLDNQPLKVLHEDAVRFYAAEVVV 705
Query: 756 ALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQ 815
ALEYLHCQGIIYRDLKPEN+LL +GH+SLTDFDLSCLTSC+PQ+ LP ++K+ K
Sbjct: 706 ALEYLHCQGIIYRDLKPENILLHRDGHISLTDFDLSCLTSCRPQVFLPEDADEKKGRKNG 765
Query: 816 QNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 875
P+F AEPMRASNSFVGTEEYIAPEII GAGHTSAVDWWALGILLYEMLYGYTPFRGKT
Sbjct: 766 SYPIFFAEPMRASNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 825
Query: 876 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935
RQ+TFANILHKD++FP+S SL A+QLMYRLLHRDP +RLGS+EGANEIK HPFF+G+N
Sbjct: 826 RQRTFANILHKDIRFPASISVSLAARQLMYRLLHRDPANRLGSYEGANEIKGHPFFRGIN 885
Query: 936 WALVRCMNPPELDAPLFATDTEKEYKVVDPGMQDL 970
W L+R PP+L+ PLF+ D ++ +V D+
Sbjct: 886 WPLIRATAPPKLEIPLFSKDDMEKKGLVTNNRTDM 920
|
|
| TAIR|locus:2155821 PHOT2 "phototropin 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1028 (366.9 bits), Expect = 7.0e-274, Sum P(4) = 7.0e-274
Identities = 221/380 (58%), Positives = 267/380 (70%)
Query: 345 AMKKPRSLSESTNRPPIIRKSEGGVEEERAG-ALGRRKSENVPPPRRNSYGGGCRTSMQR 403
A +K ++L T IR + V+E + + + S P P R + R
Sbjct: 262 ARQKEKALDSITEVVQTIRHRKSQVQESVSNDTMVKPDSSTTPTPGRQT----------R 311
Query: 404 ISEVPEKKKQKSGRRSFMGLIGRKSQSTDD-HDSF---ENEIIMXXXXXXXXXXXXXXSV 459
S+ K + GR S G K +S+++ H+ E E +M S
Sbjct: 312 QSDEASKSFRTPGRVSTP--TGSKLKSSNNRHEDLLRMEPEELMLSTEVIGQRD----SW 365
Query: 460 DDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRN 519
D R++++R+GIDLATTLERIEKNFVI+DPRLPDNPIIFASDSFLELTEYSREEILGRN
Sbjct: 366 DLSDRERDIRQGIDLATTLERIEKNFVISDPRLPDNPIIFASDSFLELTEYSREEILGRN 425
Query: 520 CRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYF 579
CRFLQGPETD ATV+KIR AI +Q ++TVQLINYTKSGKKFWNLFHLQPMRDQKGE+QYF
Sbjct: 426 CRFLQGPETDQATVQKIRDAIRDQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYF 485
Query: 580 IGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEAVKELPDANLTPEDLWANHSK 639
IGVQLDGS+H+EPL+N + E T +S KLVK TA NV+EAV+ELPDAN PEDLWA HSK
Sbjct: 486 IGVQLDGSDHVEPLQNRLSERTEMQSSKLVKATATNVDEAVRELPDANTRPEDLWAAHSK 545
Query: 640 VVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAM 699
V+P PH K+S WKAI+KI SGE + L HF+PIKPLGSGDTGSVHLVEL G+G+ +AM
Sbjct: 546 PVYPLPHNKESTSWKAIKKIQASGETVGLHHFKPIKPLGSGDTGSVHLVELKGTGELYAM 605
Query: 700 KAMDKGVMLNRNKTKTHVCL 719
KAM+K +MLNRNK C+
Sbjct: 606 KAMEKTMMLNRNKAH-RACI 624
|
|
| UNIPROTKB|Q9ST27 PHOT2 "Phototropin-2" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 1649 (585.5 bits), Expect = 1.1e-264, Sum P(2) = 1.1e-264
Identities = 341/576 (59%), Positives = 414/576 (71%)
Query: 172 GEMSDEGG----KEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGY 227
G+ S +GG LPRVS +KDALS+ QQTFVVSDAT+PD PI+YAS GFF MTGY
Sbjct: 70 GKSSVDGGVGRASHDSLPRVSQELKDALSSLQQTFVVSDATRPDCPIIYASEGFFTMTGY 129
Query: 228 TSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIK 287
+ +EVVGRNCRFLQG TD +VAKIR+ +++G+S+CGRLLNY+KDG PFWNLLT+ PI+
Sbjct: 130 SPREVVGRNCRFLQGPDTDAAEVAKIRDAVKHGRSFCGRLLNYRKDGAPFWNLLTVTPIR 189
Query: 288 DDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMK 347
DD GKV+KFIGMQVEVSK+TEG DK +RPN LP SLIRYD RQK+ A SS+TE+VQ +K
Sbjct: 190 DDNGKVIKFIGMQVEVSKYTEGLSDKRMRPNELPVSLIRYDERQKDKAMSSMTEVVQTVK 249
Query: 348 KPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEV 407
+PR + + + ++ A+ S V P + GGG + + ++
Sbjct: 250 QPRGARAPADAALLTPPKMS--DADKMAAM----SPVVAPGTPSGGGGGAGSFKSPLWDL 303
Query: 408 PEKKKQ--------KSGRRSFMGL-IGRKSQSTDDHDSFENEIIMXXXXXXXXXXXXXXS 458
+++ + KSGR S MG IG++S E S
Sbjct: 304 KKEESRLSRLASGRKSGRSSLMGFKIGKRSSVGSREAPAVVEEPAPAPPPAPEVVERTDS 363
Query: 459 VDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGR 518
+ R+K++R+GIDLATTLERIEKNFVITDPR+PDNPIIFASDSFLELTEY+REEILGR
Sbjct: 364 WERAEREKDIRQGIDLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGR 423
Query: 519 NCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQY 578
NCRFLQGPETD TV KIR AI Q ++TVQLINYTKSGKKFWNLFHLQPMRDQKGE+QY
Sbjct: 424 NCRFLQGPETDQGTVDKIREAIREQKEITVQLINYTKSGKKFWNLFHLQPMRDQKGELQY 483
Query: 579 FIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEAVKELPDANLTPEDLWANHS 638
FIGVQLDGS+H+EPLRN + E T +S KLVK TAENV++AV+ELPDANL PEDLWA HS
Sbjct: 484 FIGVQLDGSDHVEPLRNRLSENTEIQSAKLVKATAENVDDAVRELPDANLRPEDLWAIHS 543
Query: 639 KVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFA 698
V PKPH++++P W AI+K + GE+I L+HF+P+KPLG GDTGSVHLVEL GSG+ FA
Sbjct: 544 MRVSPKPHKRNNPSWIAIEKATNLGEKIGLKHFKPVKPLGCGDTGSVHLVELQGSGELFA 603
Query: 699 MKAMDKGVMLNRNKTKTHVCLITDYCPGGELFLLLD 734
MKAMDK VMLNRNK H C E++ LLD
Sbjct: 604 MKAMDKSVMLNRNKV--HRA-----CIEREIYALLD 632
|
|
| TAIR|locus:2174885 AT5G40030 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 402 (146.6 bits), Expect = 5.3e-77, Sum P(3) = 5.3e-77
Identities = 82/166 (49%), Positives = 107/166 (64%)
Query: 790 LSCLT-SC-KPQLLLPTTNEKKRRHKGQQN-PVFMAEPMRA-SNSFVGTEEYIAPEIIAG 845
++C+ SC KP+ L + K G + P+ +AEP A S SFVGT EY+APEII G
Sbjct: 299 VACIQPSCFKPRFLNNKPRKAKTEKAGSDSLPMLIAEPTAARSMSFVGTHEYLAPEIIRG 358
Query: 846 AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMY 905
GH S+VDWW GI LYE+L G TPF+G ++T N++ + LKFP + S AK L+
Sbjct: 359 DGHGSSVDWWTFGIFLYELLTGKTPFKGNGNRETLFNVVGQPLKFPEGS-ISFAAKDLIR 417
Query: 906 RLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPL 951
LL +DPK RLG +GA EIK+HPFF VNWAL+R PPE+ P+
Sbjct: 418 GLLTKDPKKRLGFKKGATEIKQHPFFNNVNWALIRSTTPPEIPKPI 463
|
|
| TAIR|locus:2178388 D6PK "D6 protein kinase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 395 (144.1 bits), Expect = 6.4e-76, Sum P(3) = 6.4e-76
Identities = 75/141 (53%), Positives = 96/141 (68%)
Query: 812 HKGQQNPVFMAEPMRA-SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 870
H+ P +AEP A S SFVGT EY+APEII G GH SAVDWW GI LYE+L+G TP
Sbjct: 326 HQVTPLPELVAEPTGARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTP 385
Query: 871 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930
F+G + T N++ + L+FP S S A+ L+ LL ++P+ RL GA EIK+HPF
Sbjct: 386 FKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRSLLVKEPQHRLAYKRGATEIKQHPF 445
Query: 931 FKGVNWALVRCMNPPELDAPL 951
F+GVNWALVRC +PPE+ P+
Sbjct: 446 FEGVNWALVRCASPPEIPKPV 466
|
|
| UNIPROTKB|Q5I6E9 Adi3 "AvrPto-dependent Pto-interacting protein 3" [Solanum lycopersicum (taxid:4081)] | Back alignment and assigned GO terms |
|---|
Score = 419 (152.6 bits), Expect = 1.2e-73, Sum P(4) = 1.2e-73
Identities = 91/193 (47%), Positives = 121/193 (62%)
Query: 792 CLT-SCKPQLLLPTTNEKK----RRHKG-QQN--PVFMAEPMRA-SNSFVGTEEYIAPEI 842
C+ +C L P ++KK R G Q N P +AEP A S SFVGT EY+APEI
Sbjct: 492 CMQPACFLPRLFPQKSKKKTPKPRADSGFQANSMPELVAEPTSARSMSFVGTHEYLAPEI 551
Query: 843 IAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQ 902
I G GH SAVDWW GI L+E+LYG TPF+G + T N++ + LKFP S TS ++
Sbjct: 552 IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPDSPATSYASRD 611
Query: 903 LMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDTEKEYKV 962
L+ LL ++P++RLG GA EIK+HPFF+GVNWAL+RC PPE+ P+ D +Y
Sbjct: 612 LIRGLLVKEPQNRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPV-EPDYPAKYGQ 670
Query: 963 VDP-GMQDLQQNV 974
V+P G+ + + V
Sbjct: 671 VNPVGVGNTSKRV 683
|
|
| POMBASE|SPAC4G8.05 ppk14 "serine/threonine protein kinase Ppk14 (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 599 (215.9 bits), Expect = 1.5e-71, Sum P(4) = 1.5e-71
Identities = 125/247 (50%), Positives = 157/247 (63%)
Query: 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 775
++C+ +YC GGE F L R+P + L E+ +FY AEV ALEYLH G IYRDLKPEN+
Sbjct: 269 YLCM--EYCMGGEFFRALQRRPGRCLSENEAKFYIAEVTAALEYLHLMGFIYRDLKPENI 326
Query: 776 LLQGNGHVSLTDFDLSCLT-SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGT 834
LL +GH+ L+DFDLS + S ++ N ++ + R +NSFVGT
Sbjct: 327 LLHESGHIMLSDFDLSKQSNSAGAPTVIQARNAPSAQNAYALDTKSCIADFR-TNSFVGT 385
Query: 835 EEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFP--S 892
EEYIAPE+I G GHTSAVDWW LGIL YEMLY TPF+GK R TF+NILHKD+ FP +
Sbjct: 386 EEYIAPEVIKGCGHTSAVDWWTLGILFYEMLYATTPFKGKNRNMTFSNILHKDVIFPEYA 445
Query: 893 STPT-SLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPL 951
P+ S K L+ +LL +D RLGS GA ++K HPFFK V WAL+R PP + P
Sbjct: 446 DAPSISSLCKNLIRKLLVKDENDRLGSQAGAADVKLHPFFKNVQWALLRHTEPPII--PK 503
Query: 952 FATDTEK 958
A EK
Sbjct: 504 LAPIDEK 510
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q2QYY8 | PHT1A_ORYSJ | 2, ., 7, ., 1, 1, ., 1 | 0.6112 | 0.8974 | 0.9500 | yes | no |
| Q2RBR1 | PHT1B_ORYSJ | 2, ., 7, ., 1, 1, ., 1 | 0.6102 | 0.8974 | 0.9500 | yes | no |
| O48963 | PHOT1_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.7071 | 0.9764 | 0.9558 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 975 | |||
| cd05574 | 316 | cd05574, STKc_phototropin_like, Catalytic domain o | 1e-155 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 1e-89 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 2e-78 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 4e-75 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 1e-74 | |
| cd05573 | 350 | cd05573, STKc_ROCK_NDR_like, Catalytic domain of R | 6e-72 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 2e-66 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 3e-66 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 4e-63 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 3e-62 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 6e-62 | |
| cd05589 | 324 | cd05589, STKc_PKN, Catalytic domain of the Protein | 1e-61 | |
| cd05584 | 323 | cd05584, STKc_p70S6K, Catalytic domain of the Prot | 4e-61 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 2e-60 | |
| cd05599 | 364 | cd05599, STKc_NDR_like, Catalytic domain of Nuclea | 1e-59 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 1e-58 | |
| cd05614 | 332 | cd05614, STKc_MSK2_N, N-terminal catalytic domain | 1e-56 | |
| cd05609 | 305 | cd05609, STKc_MAST, Catalytic domain of the Protei | 8e-56 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 4e-55 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 5e-55 | |
| cd05571 | 323 | cd05571, STKc_PKB, Catalytic domain of the Protein | 1e-54 | |
| cd05586 | 330 | cd05586, STKc_Sck1_like, Catalytic domain of Suppr | 2e-54 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 2e-54 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 4e-54 | |
| PTZ00263 | 329 | PTZ00263, PTZ00263, protein kinase A catalytic sub | 4e-53 | |
| cd05598 | 376 | cd05598, STKc_LATS, Catalytic domain of the Protei | 3e-52 | |
| cd05595 | 323 | cd05595, STKc_PKB_beta, Catalytic domain of the Pr | 5e-52 | |
| cd05600 | 333 | cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun | 3e-51 | |
| cd05613 | 290 | cd05613, STKc_MSK1_N, N-terminal catalytic domain | 3e-51 | |
| cd05597 | 331 | cd05597, STKc_DMPK_like, Catalytic domain of Myoto | 3e-51 | |
| cd05603 | 321 | cd05603, STKc_SGK2, Catalytic domain of the Protei | 2e-50 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 3e-50 | |
| cd05629 | 377 | cd05629, STKc_NDR_like_fungal, Catalytic domain of | 8e-50 | |
| cd05604 | 325 | cd05604, STKc_SGK3, Catalytic domain of the Protei | 7e-48 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 1e-47 | |
| cd05585 | 312 | cd05585, STKc_YPK1_like, Catalytic domain of Yeast | 2e-47 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 6e-47 | |
| cd05627 | 360 | cd05627, STKc_NDR2, Catalytic domain of the Protei | 1e-46 | |
| cd05587 | 324 | cd05587, STKc_cPKC, Catalytic domain of the Protei | 3e-46 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 4e-46 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 4e-46 | |
| cd05591 | 321 | cd05591, STKc_nPKC_epsilon, Catalytic domain of th | 7e-46 | |
| cd05588 | 329 | cd05588, STKc_aPKC, Catalytic domain of the Protei | 4e-45 | |
| cd05601 | 330 | cd05601, STKc_CRIK, Catalytic domain of the Protei | 4e-45 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 6e-45 | |
| cd05596 | 370 | cd05596, STKc_ROCK, Catalytic domain of the Protei | 2e-44 | |
| cd05602 | 325 | cd05602, STKc_SGK1, Catalytic domain of the Protei | 4e-44 | |
| cd05624 | 331 | cd05624, STKc_MRCK_beta, Catalytic domain of the P | 2e-43 | |
| cd05628 | 363 | cd05628, STKc_NDR1, Catalytic domain of the Protei | 3e-42 | |
| cd05623 | 332 | cd05623, STKc_MRCK_alpha, Catalytic domain of the | 1e-41 | |
| cd05615 | 323 | cd05615, STKc_cPKC_alpha, Catalytic domain of the | 4e-41 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 8e-41 | |
| cd05606 | 278 | cd05606, STKc_beta_ARK, Catalytic domain of the Pr | 8e-41 | |
| cd05617 | 327 | cd05617, STKc_aPKC_zeta, Catalytic domain of the P | 8e-41 | |
| cd05616 | 323 | cd05616, STKc_cPKC_beta, Catalytic domain of the P | 2e-40 | |
| cd05618 | 329 | cd05618, STKc_aPKC_iota, Catalytic domain of the P | 5e-40 | |
| PRK13557 | 540 | PRK13557, PRK13557, histidine kinase; Provisional | 5e-39 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 9e-39 | |
| PRK13559 | 361 | PRK13559, PRK13559, hypothetical protein; Provisio | 1e-38 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 4e-38 | |
| cd05625 | 382 | cd05625, STKc_LATS1, Catalytic domain of the Prote | 7e-38 | |
| cd05633 | 279 | cd05633, STKc_GRK3, Catalytic domain of the Protei | 1e-37 | |
| cd05621 | 370 | cd05621, STKc_ROCK2, Catalytic domain of the Prote | 4e-37 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 7e-37 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 9e-37 | |
| PRK13559 | 361 | PRK13559, PRK13559, hypothetical protein; Provisio | 1e-36 | |
| cd05622 | 371 | cd05622, STKc_ROCK1, Catalytic domain of the Prote | 5e-36 | |
| cd05626 | 381 | cd05626, STKc_LATS2, Catalytic domain of the Prote | 1e-35 | |
| PTZ00426 | 340 | PTZ00426, PTZ00426, cAMP-dependent protein kinase | 2e-35 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 1e-34 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 3e-34 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 2e-33 | |
| cd05631 | 285 | cd05631, STKc_GRK4, Catalytic domain of the Protei | 3e-32 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 9e-32 | |
| PRK13558 | 665 | PRK13558, PRK13558, bacterio-opsin activator; Prov | 2e-31 | |
| PRK13558 | 665 | PRK13558, PRK13558, bacterio-opsin activator; Prov | 5e-31 | |
| cd05607 | 277 | cd05607, STKc_GRK7, Catalytic domain of the Protei | 6e-31 | |
| PRK13557 | 540 | PRK13557, PRK13557, histidine kinase; Provisional | 2e-30 | |
| pfam13426 | 101 | pfam13426, PAS_9, PAS domain | 1e-29 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 2e-27 | |
| pfam13426 | 101 | pfam13426, PAS_9, PAS domain | 2e-26 | |
| PHA03390 | 267 | PHA03390, pk1, serine/threonine-protein kinase 1; | 3e-26 | |
| cd05576 | 237 | cd05576, STKc_RPK118_like, Catalytic domain of the | 3e-25 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 3e-25 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 4e-25 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 3e-23 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 3e-23 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 5e-23 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 5e-23 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 8e-23 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 1e-22 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 5e-22 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 6e-22 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 9e-22 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 9e-22 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 2e-21 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 1e-20 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 6e-20 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 1e-19 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 1e-19 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 7e-19 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 1e-18 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 1e-18 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 2e-18 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 2e-18 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 2e-18 | |
| cd08219 | 255 | cd08219, STKc_Nek3, Catalytic domain of the Protei | 4e-18 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 6e-18 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 7e-18 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 8e-18 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 1e-17 | |
| cd08222 | 260 | cd08222, STKc_Nek11, Catalytic domain of the Prote | 2e-17 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 3e-17 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 4e-17 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 6e-17 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 7e-17 | |
| cd06613 | 262 | cd06613, STKc_MAP4K3_like, Catalytic domain of Mit | 1e-16 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 1e-16 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 1e-16 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 4e-16 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 6e-16 | |
| cd07851 | 343 | cd07851, STKc_p38, Catalytic domain of the Serine/ | 8e-16 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 9e-16 | |
| cd07855 | 334 | cd07855, STKc_ERK5, Catalytic domain of the Serine | 1e-15 | |
| cd06608 | 275 | cd06608, STKc_myosinIII_like, Catalytic domain of | 2e-15 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 2e-15 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 2e-15 | |
| PTZ00267 | 478 | PTZ00267, PTZ00267, NIMA-related protein kinase; P | 3e-15 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 3e-15 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 9e-15 | |
| cd07857 | 332 | cd07857, STKc_MPK1, Catalytic domain of the Serine | 1e-14 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 1e-14 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 2e-14 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 2e-14 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 4e-14 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 4e-14 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 5e-14 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 6e-14 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 8e-14 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 1e-13 | |
| cd06644 | 292 | cd06644, STKc_STK10_LOK, Catalytic domain of the P | 1e-13 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 2e-13 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 2e-13 | |
| cd06636 | 282 | cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr | 3e-13 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 4e-13 | |
| cd07853 | 372 | cd07853, STKc_NLK, Catalytic domain of the Serine/ | 4e-13 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 4e-13 | |
| PRK13184 | 932 | PRK13184, pknD, serine/threonine-protein kinase; R | 5e-13 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 9e-13 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 1e-12 | |
| TIGR02938 | 494 | TIGR02938, nifL_nitrog, nitrogen fixation negative | 1e-12 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 1e-12 | |
| cd07876 | 359 | cd07876, STKc_JNK2, Catalytic domain of the Serine | 2e-12 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 2e-12 | |
| cd08229 | 267 | cd08229, STKc_Nek7, Catalytic domain of the Protei | 2e-12 | |
| cd08228 | 267 | cd08228, STKc_Nek6, Catalytic domain of the Protei | 2e-12 | |
| cd06637 | 272 | cd06637, STKc_TNIK, Catalytic domain of the Protei | 3e-12 | |
| cd06622 | 286 | cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of | 3e-12 | |
| cd08223 | 257 | cd08223, STKc_Nek4, Catalytic domain of the Protei | 3e-12 | |
| cd07849 | 336 | cd07849, STKc_ERK1_2_like, Catalytic domain of Ext | 4e-12 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 5e-12 | |
| PTZ00036 | 440 | PTZ00036, PTZ00036, glycogen synthase kinase; Prov | 7e-12 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 7e-12 | |
| cd06617 | 283 | cd06617, PKc_MKK3_6, Catalytic domain of the dual- | 7e-12 | |
| cd00130 | 103 | cd00130, PAS, PAS domain; PAS motifs appear in arc | 1e-11 | |
| cd06645 | 267 | cd06645, STKc_MAP4K3, Catalytic domain of the Prot | 1e-11 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 2e-11 | |
| PLN00034 | 353 | PLN00034, PLN00034, mitogen-activated protein kina | 2e-11 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 3e-11 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 3e-11 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 5e-11 | |
| cd07848 | 287 | cd07848, STKc_CDKL5, Catalytic domain of the Serin | 5e-11 | |
| cd06607 | 307 | cd06607, STKc_TAO, Catalytic domain of the Protein | 5e-11 | |
| cd07863 | 288 | cd07863, STKc_CDK4, Catalytic domain of the Serine | 5e-11 | |
| cd07879 | 342 | cd07879, STKc_p38delta_MAPK13, Catalytic domain of | 8e-11 | |
| cd07859 | 338 | cd07859, STKc_TDY_MAPK_plant, Catalytic domain of | 1e-10 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 1e-10 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 1e-10 | |
| cd07844 | 291 | cd07844, STKc_PCTAIRE_like, Catalytic domain of PC | 2e-10 | |
| cd07858 | 337 | cd07858, STKc_TEY_MAPK_plant, Catalytic domain of | 2e-10 | |
| TIGR03903 | 1266 | TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas | 2e-10 | |
| cd07880 | 343 | cd07880, STKc_p38gamma_MAPK12, Catalytic domain of | 2e-10 | |
| cd06618 | 296 | cd06618, PKc_MKK7, Catalytic domain of the dual-sp | 3e-10 | |
| cd07874 | 355 | cd07874, STKc_JNK3, Catalytic domain of the Serine | 4e-10 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 4e-10 | |
| cd07877 | 345 | cd07877, STKc_p38alpha_MAPK14, Catalytic domain of | 4e-10 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 5e-10 | |
| cd07865 | 310 | cd07865, STKc_CDK9, Catalytic domain of the Serine | 5e-10 | |
| cd07875 | 364 | cd07875, STKc_JNK1, Catalytic domain of the Serine | 5e-10 | |
| PHA03209 | 357 | PHA03209, PHA03209, serine/threonine kinase US3; P | 7e-10 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 7e-10 | |
| cd07850 | 353 | cd07850, STKc_JNK, Catalytic domain of the Serine/ | 7e-10 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 7e-10 | |
| cd06646 | 267 | cd06646, STKc_MAP4K5, Catalytic domain of the Prot | 9e-10 | |
| cd06635 | 317 | cd06635, STKc_TAO1, Catalytic domain of the Protei | 1e-09 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 2e-09 | |
| PHA03211 | 461 | PHA03211, PHA03211, serine/threonine kinase US3; P | 3e-09 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 4e-09 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 4e-09 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 4e-09 | |
| cd06616 | 288 | cd06616, PKc_MKK4, Catalytic domain of the dual-sp | 4e-09 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 5e-09 | |
| cd05108 | 316 | cd05108, PTKc_EGFR, Catalytic domain of the Protei | 5e-09 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 5e-09 | |
| cd00130 | 103 | cd00130, PAS, PAS domain; PAS motifs appear in arc | 6e-09 | |
| cd06639 | 291 | cd06639, STKc_myosinIIIB, Catalytic domain of the | 6e-09 | |
| cd06652 | 265 | cd06652, STKc_MEKK2, Catalytic domain of the Prote | 7e-09 | |
| cd06653 | 264 | cd06653, STKc_MEKK3_like_1, Catalytic domain of MA | 9e-09 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 1e-08 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 1e-08 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 1e-08 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 1e-08 | |
| PHA03207 | 392 | PHA03207, PHA03207, serine/threonine kinase US3; P | 1e-08 | |
| cd07872 | 309 | cd07872, STKc_PCTAIRE2, Catalytic domain of the Se | 2e-08 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 2e-08 | |
| pfam08447 | 90 | pfam08447, PAS_3, PAS fold | 2e-08 | |
| cd07870 | 291 | cd07870, STKc_PFTAIRE2, Catalytic domain of the Se | 2e-08 | |
| TIGR00229 | 124 | TIGR00229, sensory_box, PAS domain S-box | 2e-08 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 2e-08 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 3e-08 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 3e-08 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 3e-08 | |
| cd06638 | 286 | cd06638, STKc_myosinIIIA, Catalytic domain of the | 3e-08 | |
| cd07869 | 303 | cd07869, STKc_PFTAIRE1, Catalytic domain of the Se | 3e-08 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 4e-08 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 6e-08 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 6e-08 | |
| cd07854 | 342 | cd07854, STKc_MAPK4_6, Catalytic domain of the Ser | 9e-08 | |
| smart00086 | 43 | smart00086, PAC, Motif C-terminal to PAS motifs (l | 1e-07 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 1e-07 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 1e-07 | |
| cd06633 | 313 | cd06633, STKc_TAO3, Catalytic domain of the Protei | 2e-07 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 2e-07 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 2e-07 | |
| PHA03212 | 391 | PHA03212, PHA03212, serine/threonine kinase US3; P | 2e-07 | |
| COG2202 | 232 | COG2202, AtoS, FOG: PAS/PAC domain [Signal transdu | 2e-07 | |
| cd08216 | 314 | cd08216, PK_STRAD, Pseudokinase domain of STE20-re | 2e-07 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 2e-07 | |
| cd07837 | 295 | cd07837, STKc_CdkB_plant, Catalytic domain of the | 2e-07 | |
| PHA03210 | 501 | PHA03210, PHA03210, serine/threonine kinase US3; P | 2e-07 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 2e-07 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 2e-07 | |
| TIGR02938 | 494 | TIGR02938, nifL_nitrog, nitrogen fixation negative | 3e-07 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 3e-07 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 3e-07 | |
| cd06634 | 308 | cd06634, STKc_TAO2, Catalytic domain of the Protei | 4e-07 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 4e-07 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 4e-07 | |
| cd07878 | 343 | cd07878, STKc_p38beta_MAPK11, Catalytic domain of | 5e-07 | |
| cd07867 | 317 | cd07867, STKc_CDC2L6, Catalytic domain of Serine/T | 5e-07 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 6e-07 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 6e-07 | |
| cd07868 | 317 | cd07868, STKc_CDK8, Catalytic domain of the Serine | 6e-07 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 7e-07 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 8e-07 | |
| PTZ00024 | 335 | PTZ00024, PTZ00024, cyclin-dependent protein kinas | 8e-07 | |
| pfam00989 | 113 | pfam00989, PAS, PAS fold | 1e-06 | |
| COG2202 | 232 | COG2202, AtoS, FOG: PAS/PAC domain [Signal transdu | 2e-06 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 2e-06 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 2e-06 | |
| pfam00989 | 113 | pfam00989, PAS, PAS fold | 3e-06 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 3e-06 | |
| TIGR00229 | 124 | TIGR00229, sensory_box, PAS domain S-box | 4e-06 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 4e-06 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 4e-06 | |
| cd05103 | 343 | cd05103, PTKc_VEGFR2, Catalytic domain of the Prot | 4e-06 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 4e-06 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 5e-06 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 6e-06 | |
| cd05102 | 338 | cd05102, PTKc_VEGFR3, Catalytic domain of the Prot | 7e-06 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 9e-06 | |
| cd05111 | 279 | cd05111, PTK_HER3, Pseudokinase domain of the Prot | 1e-05 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 1e-05 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 1e-05 | |
| pfam08447 | 90 | pfam08447, PAS_3, PAS fold | 2e-05 | |
| smart00086 | 43 | smart00086, PAC, Motif C-terminal to PAS motifs (l | 2e-05 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 2e-05 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 2e-05 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 3e-05 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 3e-05 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 4e-05 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 5e-05 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 5e-05 | |
| cd05109 | 279 | cd05109, PTKc_HER2, Catalytic domain of the Protei | 5e-05 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 6e-05 | |
| cd05054 | 337 | cd05054, PTKc_VEGFR, Catalytic domain of the Prote | 2e-04 | |
| cd05115 | 257 | cd05115, PTKc_Zap-70, Catalytic domain of the Prot | 3e-04 | |
| cd05116 | 257 | cd05116, PTKc_Syk, Catalytic domain of the Protein | 4e-04 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 6e-04 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 6e-04 | |
| cd05105 | 400 | cd05105, PTKc_PDGFR_alpha, Catalytic domain of the | 7e-04 | |
| PTZ00266 | 1021 | PTZ00266, PTZ00266, NIMA-related protein kinase; P | 8e-04 | |
| PTZ00284 | 467 | PTZ00284, PTZ00284, protein kinase; Provisional | 0.001 | |
| cd05107 | 401 | cd05107, PTKc_PDGFR_beta, Catalytic domain of the | 0.001 | |
| PLN03224 | 507 | PLN03224, PLN03224, probable serine/threonine prot | 0.001 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 0.001 | |
| smart00091 | 67 | smart00091, PAS, PAS domain | 0.002 | |
| cd05095 | 296 | cd05095, PTKc_DDR2, Catalytic domain of the Protei | 0.003 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 0.003 | |
| cd05043 | 280 | cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece | 0.003 | |
| PHA02882 | 294 | PHA02882, PHA02882, putative serine/threonine kina | 0.004 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 0.004 |
| >gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 460 bits (1187), Expect = e-155
Identities = 163/316 (51%), Positives = 202/316 (63%), Gaps = 29/316 (9%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKTK-------------- 714
+HF+ IK LG GD G V LV L G+G+ FA+K +DK M+ RNK K
Sbjct: 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDH 60
Query: 715 -------------THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH 761
T++CL+ DYCPGGELF LL RQP K L E+ RFYAAEV++ALEYLH
Sbjct: 61 PFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLH 120
Query: 762 CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT--TNEKKRRHKGQQNPV 819
GI+YRDLKPEN+LL +GH+ L+DFDLS + +P + ++ +
Sbjct: 121 LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSET 180
Query: 820 FMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879
F EP SNSFVGTEEYIAPE+I+G GH SAVDWW LGILLYEMLYG TPF+G R +T
Sbjct: 181 FSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDET 240
Query: 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 939
F+NIL K++ FP S P S A+ L+ +LL +DP RLGS GA EIK+HPFF+GVNWAL+
Sbjct: 241 FSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNWALI 300
Query: 940 RCMNPPELDAPLFATD 955
R PP + P D
Sbjct: 301 RHTTPPIIPRPDDGID 316
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 285 bits (732), Expect = 1e-89
Identities = 112/282 (39%), Positives = 148/282 (52%), Gaps = 59/282 (20%)
Query: 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK------------------------ 712
LG G G V LV +G+ +AMK + K ++ R +
Sbjct: 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHY 60
Query: 713 ---TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRD 769
T+ + L+ +Y PGGELF L ++ E+ RFYAAE+V+ALEYLH GIIYRD
Sbjct: 61 AFQTEEKLYLVLEYAPGGELFSHLSKE--GRFSEERARFYAAEIVLALEYLHSLGIIYRD 118
Query: 770 LKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASN 829
LKPEN+LL +GH+ LTDF L+ +E R N
Sbjct: 119 LKPENILLDADGHIKLTDFGLAK--------------------------ELSSEGSRT-N 151
Query: 830 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 889
+F GT EY+APE++ G G+ AVDWW+LG+LLYEML G PF + R++ + IL L+
Sbjct: 152 TFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLR 211
Query: 890 FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
FP S A+ L+ LL +DP RLGS GA EIK HPFF
Sbjct: 212 FPEF--LSPEARDLISGLLQKDPTKRLGSG-GAEEIKAHPFF 250
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 257 bits (658), Expect = 2e-78
Identities = 112/297 (37%), Positives = 147/297 (49%), Gaps = 64/297 (21%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKTKTHVC---------- 718
F IK LG+G G V LV GSG+Y+A+K + K ++ + K HV
Sbjct: 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIV-KLKQVEHVLNEKRILQSIR 59
Query: 719 ------------------LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYL 760
L+ +Y PGGELF L + + E RFYAA+VV+ALEYL
Sbjct: 60 HPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRK--SGRFPEPVARFYAAQVVLALEYL 117
Query: 761 HCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVF 820
H I+YRDLKPEN+LL +G++ +TDF + KR
Sbjct: 118 HSLDIVYRDLKPENLLLDSDGYIKITDFGFA-----------------KRVKGRTY---- 156
Query: 821 MAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880
+ GT EY+APEII G+ AVDWWALGIL+YEML GY PF + +
Sbjct: 157 ---------TLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIY 207
Query: 881 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNW 936
IL ++FPS S AK L+ LL D RLG+ G N+IK HP+F G++W
Sbjct: 208 EKILEGKVRFPS--FFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDW 262
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 247 bits (632), Expect = 4e-75
Identities = 106/287 (36%), Positives = 153/287 (53%), Gaps = 49/287 (17%)
Query: 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKTKT--------------------- 715
+ G G V L + +G +A+K + K M+ +N+
Sbjct: 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYY 60
Query: 716 ------HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRD 769
++ L+ +Y PGG+L LL+ L ED R Y AE+V+ALEYLH GII+RD
Sbjct: 61 SFQGKKNLYLVMEYLPGGDLASLLEN--VGSLDEDVARIYIAEIVLALEYLHSNGIIHRD 118
Query: 770 LKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASN 829
LKP+N+L+ NGH+ LTDF LS + + Q+ L ++ +R
Sbjct: 119 LKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKR------------------ 160
Query: 830 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 889
VGT +YIAPE+I G GH+ VDWW+LG +LYE L G PF G+T ++ F NIL+ ++
Sbjct: 161 -IVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIE 219
Query: 890 FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936
+P S A L+ +LL DP+ RLG+ + EIK HPFFKG++W
Sbjct: 220 WPEDVEVSDEAIDLISKLLVPDPEKRLGA-KSIEEIKNHPFFKGIDW 265
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 245 bits (628), Expect = 1e-74
Identities = 94/288 (32%), Positives = 137/288 (47%), Gaps = 61/288 (21%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK------------------ 712
+ ++ LG G G V+L +G+ A+K + K + +
Sbjct: 1 YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIV 60
Query: 713 -------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGI 765
+ + L+ +YC GG+LF LL ++ L ED RFY +++ ALEYLH +GI
Sbjct: 61 RLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGR--LSEDEARFYLRQILSALEYLHSKGI 118
Query: 766 IYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPM 825
++RDLKPEN+LL +GHV L DF L+ +
Sbjct: 119 VHRDLKPENILLDEDGHVKLADFGLAR---------------------------QLDPGE 151
Query: 826 RASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK-TRQKTFANIL 884
+ +FVGT EY+APE++ G G+ AVD W+LG++LYE+L G PF G + F I
Sbjct: 152 KL-TTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIG 210
Query: 885 HKDLKFPSSTPT-SLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
FP S AK L+ +LL +DP+ RL A E +HPFF
Sbjct: 211 KPKPPFPPPEWDISPEAKDLIRKLLVKDPEKRL----TAEEALQHPFF 254
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 241 bits (618), Expect = 6e-72
Identities = 119/313 (38%), Positives = 164/313 (52%), Gaps = 51/313 (16%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKT----------------- 713
F IK +G G G V LV +GQ +AMK + K M+ RN+
Sbjct: 3 FEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPW 62
Query: 714 ----------KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ 763
+ H+ L+ +Y PGG+L LL R+ V E+ RFY AE+V+AL+ +H
Sbjct: 63 IVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKL 120
Query: 764 GIIYRDLKPENVLLQGNGHVSLTDFDLS---------CLTSCKPQLLLPTTNEKKRRHKG 814
G I+RD+KP+N+L+ +GH+ L DF L LL N RR
Sbjct: 121 GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDH 180
Query: 815 QQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 874
+Q V +NS VGT +YIAPE++ G + DWW+LG++LYEMLYG+ PF
Sbjct: 181 KQRRVR-------ANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD 233
Query: 875 TRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
T Q+T+ I++ + L+FP P S A L+ RLL DP+ RLGS E EIK HPFFK
Sbjct: 234 TLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLL-CDPEDRLGSFE---EIKSHPFFK 289
Query: 933 GVNWALVRCMNPP 945
G++W +R PP
Sbjct: 290 GIDWENLRETKPP 302
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 224 bits (573), Expect = 2e-66
Identities = 99/293 (33%), Positives = 146/293 (49%), Gaps = 47/293 (16%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKTKTHVC------------ 718
F+ K +G G +V L + + + +A+K +DK ++ K K +V
Sbjct: 3 FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVK-YVKIEKEVLTRLNGH 61
Query: 719 -----------------LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH 761
+ +Y P GEL + + + L E RFYAAE+++ALEYLH
Sbjct: 62 PGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGS--LDEKCTRFYAAEILLALEYLH 119
Query: 762 CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL---TSCKPQLLLPTTNEKKRRHKGQQNP 818
+GII+RDLKPEN+LL + H+ +TDF + + S TN + K ++
Sbjct: 120 SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRF 179
Query: 819 VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878
SFVGT EY++PE++ + D WALG ++Y+ML G PFRG
Sbjct: 180 ----------ASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL 229
Query: 879 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
TF IL + FP + P AK L+ +LL DP+ RLG +EG +E+K HPFF
Sbjct: 230 TFQKILKLEYSFPPNFP--PDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 222 bits (568), Expect = 3e-66
Identities = 91/293 (31%), Positives = 136/293 (46%), Gaps = 65/293 (22%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDK---------------GVMLNRN---- 711
+ ++ LGSG G+V+ + G+G+ A+K + K ++ +
Sbjct: 1 YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNI 60
Query: 712 -------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG 764
+ K H+ L+ +YC GG+LF L R L ED + A +++ LEYLH G
Sbjct: 61 VRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRG--GPLSEDEAKKIALQILRGLEYLHSNG 118
Query: 765 IIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEP 824
II+RDLKPEN+LL NG V + DF L+ L
Sbjct: 119 IIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSSL----------------------- 155
Query: 825 MRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTR---QKTF 880
+FVGT Y+APE++ G G+ VD W+LG++LYE+L G PF G+ +
Sbjct: 156 ----TTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLI 211
Query: 881 ANILHKDLKFPSSTPTSLH--AKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
IL L+F +S AK L+ + L++DP R A EI +HP+F
Sbjct: 212 RRILGPPLEFDEPKWSSGSEEAKDLIKKCLNKDPSKRP----TAEEILQHPWF 260
|
Length = 260 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 216 bits (551), Expect = 4e-63
Identities = 112/343 (32%), Positives = 166/343 (48%), Gaps = 73/343 (21%)
Query: 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN----------------------- 711
K LG G G V L EL G+ + +A+K + K V+L +
Sbjct: 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQ 60
Query: 712 -----KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGII 766
+TK + + +Y GG+L + R E RFYAAE+V+ L++LH +GII
Sbjct: 61 LHSCFQTKDRLFFVMEYVNGGDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHERGII 118
Query: 767 YRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMR 826
YRDLK +NVLL GH+ + DF + CK +L T
Sbjct: 119 YRDLKLDNVLLDSEGHIKIADFGM-----CKEGILGGVT--------------------- 152
Query: 827 ASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 886
+++F GT +YIAPEI++ + AVDWWALG+LLYEML G +PF G + F +IL
Sbjct: 153 -TSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED 211
Query: 887 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNW-ALVRC-MN 943
++++P S AK ++ L ++P+ RLG G +IK HPFF+ ++W L R +
Sbjct: 212 EVRYPRW--LSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDWDKLERKEIK 269
Query: 944 PP-------ELDAPLFATDTEKEYKVVDPG----MQDLQQNVF 975
PP D F + KE V+ P ++++ Q F
Sbjct: 270 PPFKPKIKGRFDVSNFDDEFTKEKPVLTPPDEAIIRNIDQEEF 312
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 211 bits (540), Expect = 3e-62
Identities = 101/293 (34%), Positives = 144/293 (49%), Gaps = 64/293 (21%)
Query: 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK--------------------- 712
+KP+ G GSV+L + +G YFA+K + K M+ +N+
Sbjct: 1 LKPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVA 60
Query: 713 -------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGI 765
+K ++ L+ +Y GG+ L+ + L ED + Y AEVV+ +E LH +GI
Sbjct: 61 KLYYSFQSKDYLYLVMEYLNGGDCASLI--KTLGGLPEDWAKQYIAEVVLGVEDLHQRGI 118
Query: 766 IYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPM 825
I+RD+KPEN+L+ GH+ LTDF LS G +N
Sbjct: 119 IHRDIKPENLLIDQTGHLKLTDFGLS--------------------RNGLENK------- 151
Query: 826 RASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH 885
FVGT +Y+APE I G G DWW+LG +++E L+GY PF +T F NIL
Sbjct: 152 ----KFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILS 207
Query: 886 KDLKFPSSTPTSL--HAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936
+ + +P A L+ RLL DP RLG++ G EIK HPFFK +NW
Sbjct: 208 RRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGAN-GYQEIKSHPFFKSINW 259
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 210 bits (538), Expect = 6e-62
Identities = 103/293 (35%), Positives = 147/293 (50%), Gaps = 66/293 (22%)
Query: 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN------------------------- 711
LG G G V LV++ + FA+K + K ++
Sbjct: 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYR 60
Query: 712 --KTKTHVCLITDYCPGGELF-LLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYR 768
K K ++ ++ +YC GGEL+ +L DR + E RFY A VV+A EYLH +GIIYR
Sbjct: 61 TFKDKKYIYMLMEYCLGGELWTILRDR---GLFDEYTARFYIACVVLAFEYLHNRGIIYR 117
Query: 769 DLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRAS 828
DLKPEN+LL NG+V L DF + K K +
Sbjct: 118 DLKPENLLLDSNGYVKLVDFG--------------FAKKLKSGQK--------------T 149
Query: 829 NSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG--KTRQKTFANILH- 885
+F GT EY+APEII G+ +VD+W+LGILLYE+L G PF + + + +IL
Sbjct: 150 WTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKG 209
Query: 886 -KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNW 936
L+FP+ + AK L+ +LL R+P+ RLG+ + G +IKKH +F G +W
Sbjct: 210 NGKLEFPNYIDKA--AKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDW 260
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Score = 212 bits (541), Expect = 1e-61
Identities = 104/307 (33%), Positives = 152/307 (49%), Gaps = 64/307 (20%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN------------------- 711
FR + LG G G V L E +G+ +A+KA+ KG ++ R+
Sbjct: 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSER 60
Query: 712 -----------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYL 760
+T+ HVC + +Y GG+L + + V E FYAA VV+ L+YL
Sbjct: 61 HPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYL 117
Query: 761 HCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVF 820
H I+YRDLK +N+LL G V + DF L CK
Sbjct: 118 HENKIVYRDLKLDNLLLDTEGFVKIADFGL-----CKEG--------------------- 151
Query: 821 MAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880
M R S +F GT E++APE++ +T AVDWW LG+L+YEML G +PF G ++ F
Sbjct: 152 MGFGDRTS-TFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVF 210
Query: 881 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNW-AL 938
+I++ ++++P A +M RLL R+P+ RLGS E A ++KK PFF+ +NW L
Sbjct: 211 DSIVNDEVRYPRFLSRE--AISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINWDDL 268
Query: 939 VRCMNPP 945
+ P
Sbjct: 269 LARKIKP 275
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324 |
| >gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 210 bits (537), Expect = 4e-61
Identities = 125/334 (37%), Positives = 168/334 (50%), Gaps = 74/334 (22%)
Query: 674 IKPLGSGDTGSVHLVE-LCGS--GQYFAMKAMDKGVMLNRNKTKTH-------------- 716
+K LG G G V V + G+ G+ FAMK + K ++ K H
Sbjct: 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHP 60
Query: 717 --------------VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC 762
+ LI +Y GGELF+ L+R+ + ED FY +E+ +ALE+LH
Sbjct: 61 FIVDLIYAFQTGGKLYLILEYLSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLHQ 118
Query: 763 QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 822
QGIIYRDLKPEN+LL GHV LTDF L CK + H+G
Sbjct: 119 QGIIYRDLKPENILLDAQGHVKLTDFGL-----CKESI-----------HEGT------- 155
Query: 823 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 882
+++F GT EY+APEI+ +GH AVDWW+LG L+Y+ML G PF + R+KT
Sbjct: 156 ----VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDK 211
Query: 883 ILHKDLKFPSS-TPTSLHAKQLMYRLLHRDPKSRLGSHEG-ANEIKKHPFFKGVNW--AL 938
IL L P TP A+ L+ +LL R+P SRLG+ G A E++ HPFF+ VNW L
Sbjct: 212 ILKGKLNLPPYLTP---EARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNWDDLL 268
Query: 939 VRCMNPP-------ELDAPLFATDTEKEYKVVDP 965
R + PP E D F + ++ V P
Sbjct: 269 ARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSP 302
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 208 bits (530), Expect = 2e-60
Identities = 114/309 (36%), Positives = 155/309 (50%), Gaps = 71/309 (22%)
Query: 671 FRPIKPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRNKTKTH----------- 716
F ++ LG+G G V LV G +G+ +AMK + K ++ + KT H
Sbjct: 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAV 61
Query: 717 ------------------VCLITDYCPGGELFL-LLDRQPTKVLKEDAVRFYAAEVVVAL 757
+ LI DY GGELF L R+ E VR Y AE+V+AL
Sbjct: 62 RRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREH---FTESEVRVYIAEIVLAL 118
Query: 758 EYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQN 817
++LH GIIYRD+K EN+LL GHV LTDF LS
Sbjct: 119 DHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLS-------------------------- 152
Query: 818 PVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFR--- 872
F+AE + SF GT EY+APE+I G GH AVDWW+LG+L +E+L G +PF
Sbjct: 153 KEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDG 212
Query: 873 GKTRQKTFAN-ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
+ Q + IL FP + S A+ + +LL +DPK RLG++ GA+EIK HPFF
Sbjct: 213 EQNSQSEISRRILKSKPPFPKT--MSAEARDFIQKLLEKDPKKRLGAN-GADEIKNHPFF 269
Query: 932 KGVNWALVR 940
+G++W +
Sbjct: 270 QGIDWDDLA 278
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 207 bits (530), Expect = 1e-59
Identities = 117/336 (34%), Positives = 166/336 (49%), Gaps = 64/336 (19%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKTKTHV------------- 717
F IK +G G G V LV+ +G +AMK + K ML + + HV
Sbjct: 3 FESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQV-AHVRAERDILAEADNP 61
Query: 718 ---------------CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC 762
LI +Y PGG++ LL ++ T E+ RFY AE ++A++ +H
Sbjct: 62 WVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDT--FTEEETRFYIAETILAIDSIHK 119
Query: 763 QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRR---HKGQQNPV 819
G I+RD+KP+N+LL GH+ L+DF L C L E R
Sbjct: 120 LGYIHRDIKPDNLLLDAKGHIKLSDFGL-----CTG-LKKSHRTEFYRILSHALPSNFLD 173
Query: 820 FMAEPM----RASN----------SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 865
F+++PM +A S VGT +YIAPE+ G+ DWW+LG+++YEML
Sbjct: 174 FISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEML 233
Query: 866 YGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 923
GY PF Q+T+ I++ + L+FP P S AK L+ RL + + RLG++ G N
Sbjct: 234 VGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLC-CEAERRLGNN-GVN 291
Query: 924 EIKKHPFFKGVNWALVRCMNP---PELDAPLFATDT 956
EIK HPFFKGV+W +R PEL + TDT
Sbjct: 292 EIKSHPFFKGVDWEHIRERPAPIIPELKSI---TDT 324
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 202 bits (516), Expect = 1e-58
Identities = 110/307 (35%), Positives = 150/307 (48%), Gaps = 64/307 (20%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAM----------------DKGVMLNRN- 711
IK +G+G G VHLV S Y+A+K M +K V+ +
Sbjct: 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSH 60
Query: 712 ----------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH 761
+ + ++ +Y PGGELF L + + FYA+E+V ALEYLH
Sbjct: 61 PFIIRLFWTEHDQRFLYMLMEYVPGGELFSYL--RNSGRFSNSTGLFYASEIVCALEYLH 118
Query: 762 CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFM 821
+ I+YRDLKPEN+LL GH+ LTDF + KK R +
Sbjct: 119 SKEIVYRDLKPENILLDKEGHIKLTDFGFA----------------KKLRDR-------- 154
Query: 822 AEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881
+ + GT EY+APE+I GH AVDWWALGIL+YEML GY PF +
Sbjct: 155 ------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYE 208
Query: 882 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALV- 939
IL L+FP L+AK L+ +LL D RLG+ + GA+++K H +FK V+W V
Sbjct: 209 KILAGKLEFPRH--LDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWDDVP 266
Query: 940 -RCMNPP 945
R + PP
Sbjct: 267 QRKLKPP 273
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Score = 198 bits (505), Expect = 1e-56
Identities = 124/340 (36%), Positives = 178/340 (52%), Gaps = 77/340 (22%)
Query: 671 FRPIKPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRNKTKTH----------- 716
F +K LG+G G V LV +G+ +AMK + K ++ + KT H
Sbjct: 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHV 61
Query: 717 ------------------VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALE 758
+ LI DY GGE+F L ++ ED VRFY+ E+++ALE
Sbjct: 62 RQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALE 119
Query: 759 YLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNP 818
+LH GI+YRD+K EN+LL GHV LTDF LS
Sbjct: 120 HLHKLGIVYRDIKLENILLDSEGHVVLTDFGLS--------------------------K 153
Query: 819 VFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877
F++E + SF GT EY+APEII G GH AVDWW+LGIL++E+L G +PF + +
Sbjct: 154 EFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGER 213
Query: 878 KTFANILHKDLKFPSSTPTSLH--AKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGV 934
T + + + LK P+ + A+ L+++LL +DPK RLG+ +GA+EIK+HPFFKG+
Sbjct: 214 NTQSEVSRRILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL 273
Query: 935 NWALV--RCMNPP-------ELDAPLFATDTEKEYKVVDP 965
+W + R +NPP ELD FA +E+ ++P
Sbjct: 274 DWEALALRKVNPPFRPSIRNELDVGNFA----EEFTNLEP 309
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332 |
| >gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Score = 195 bits (497), Expect = 8e-56
Identities = 113/305 (37%), Positives = 158/305 (51%), Gaps = 56/305 (18%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK------------------ 712
F IK + +G G+V+LV + Q FAMK ++K ++ RN+
Sbjct: 3 FETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPF 62
Query: 713 ---------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ 763
TK H+C++ +Y GG+ LL L D R Y AE V+ALEYLH
Sbjct: 63 VVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGA--LPVDMARMYFAETVLALEYLHNY 120
Query: 764 GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN------EKKRRHKGQQN 817
GI++RDLKP+N+L+ GH+ LTDF LS K L+ TTN EK R
Sbjct: 121 GIVHRDLKPDNLLITSMGHIKLTDFGLS-----KIGLMSLTTNLYEGHIEKDTRE----- 170
Query: 818 PVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877
F+ GT EYIAPE+I G+ VDWWA+GI+LYE L G PF G T +
Sbjct: 171 --FL------DKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE 222
Query: 878 KTFANILHKDLKFPSS-TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936
+ F ++ D+++P A+ L+ RLL ++P RLG+ GA E+K+H FF G++W
Sbjct: 223 ELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTG-GAFEVKQHRFFLGLDW 281
Query: 937 -ALVR 940
L+R
Sbjct: 282 NGLLR 286
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 193 bits (492), Expect = 4e-55
Identities = 103/301 (34%), Positives = 152/301 (50%), Gaps = 64/301 (21%)
Query: 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN----------------------- 711
K LG G G V L EL G+ ++FA+KA+ K V+L +
Sbjct: 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTH 60
Query: 712 -----KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGII 766
+TK H+ + +Y GG+L + Q + E RFYAAE++ L++LH +GII
Sbjct: 61 LFCTFQTKEHLFFVMEYLNGGDLMFHI--QSSGRFDEARARFYAAEIICGLQFLHKKGII 118
Query: 767 YRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMR 826
YRDLK +NVLL +GH+ + DF + CK +
Sbjct: 119 YRDLKLDNVLLDKDGHIKIADFGM-----CKENMNGEGK--------------------- 152
Query: 827 ASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 886
+++F GT +YIAPEI+ G + +VDWW+ G+LLYEML G +PF G+ + F +IL+
Sbjct: 153 -ASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND 211
Query: 887 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV--RCMNP 944
FP S AK + +L RDP RLG +I++HPFF+G++W + R + P
Sbjct: 212 RPHFPRW--ISKEAKDCLSKLFERDPTKRLGV---DGDIRQHPFFRGIDWERLEKREIPP 266
Query: 945 P 945
P
Sbjct: 267 P 267
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 193 bits (493), Expect = 5e-55
Identities = 105/301 (34%), Positives = 146/301 (48%), Gaps = 61/301 (20%)
Query: 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKTK-------------THVCLIT 721
K +G G G V L + G+++A+K + K +L + + K H L+
Sbjct: 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVG 60
Query: 722 ---------------DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGII 766
DY GGELF L R+ + E RFYAAE+ AL YLH II
Sbjct: 61 LHYSFQTADKLYFVLDYVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSLNII 118
Query: 767 YRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMR 826
YRDLKPEN+LL GHV LTDF L CK + E +
Sbjct: 119 YRDLKPENILLDSQGHVVLTDFGL-----CKEGI----------------------EHSK 151
Query: 827 ASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 886
+++F GT EY+APE++ + VDWW LG +LYEMLYG PF + + + NIL+K
Sbjct: 152 TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNK 211
Query: 887 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA--LVRCMNP 944
L+ + S+ A+ L+ LL +D RLG+ + EIK H FF +NW + + + P
Sbjct: 212 PLRLKPN--ISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINWDDLVNKKITP 269
Query: 945 P 945
P
Sbjct: 270 P 270
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Score = 192 bits (490), Expect = 1e-54
Identities = 109/315 (34%), Positives = 157/315 (49%), Gaps = 61/315 (19%)
Query: 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN----------------------- 711
K LG G G V LV +G+Y+AMK + K V++ ++
Sbjct: 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTAL 60
Query: 712 ----KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIY 767
+T +C + +Y GGELF L R+ +V ED RFY AE+V AL YLH ++Y
Sbjct: 61 KYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSCDVVY 118
Query: 768 RDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRA 827
RDLK EN++L +GH+ +TDF L CK + T
Sbjct: 119 RDLKLENLMLDKDGHIKITDFGL-----CKEGISDGAT---------------------- 151
Query: 828 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 887
+F GT EY+APE++ + AVDWW LG+++YEM+ G PF + +K F IL ++
Sbjct: 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE 211
Query: 888 LKFPSSTPTSLHAKQLMYRLLHRDPKSRL-GSHEGANEIKKHPFFKGVNW-ALVRCMNPP 945
++FP + S AK L+ LL +DPK RL G E A EI +H FF +NW +V+ P
Sbjct: 212 IRFPRT--LSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINWQDVVQKKLEP 269
Query: 946 ELDAPLFATDTEKEY 960
P ++T+ Y
Sbjct: 270 PFK-PQVTSETDTRY 283
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323 |
| >gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 192 bits (489), Expect = 2e-54
Identities = 103/302 (34%), Positives = 157/302 (51%), Gaps = 63/302 (20%)
Query: 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN------------------------- 711
+G G G V+ V + + +AMK + K ++ +
Sbjct: 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVG 60
Query: 712 -----KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGII 766
+T + + L+TDY GGELF L Q ED +FY AE+V+ALE+LH I+
Sbjct: 61 LKFSFQTDSDLYLVTDYMSGGELFWHL--QKEGRFSEDRAKFYIAELVLALEHLHKYDIV 118
Query: 767 YRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMR 826
YRDLKPEN+LL GH++L DF LS K L T N+
Sbjct: 119 YRDLKPENILLDATGHIALCDFGLS-----KANL---TDNK------------------- 151
Query: 827 ASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH 885
+N+F GT EY+APE++ G+T VD+W+LG+L++EM G++PF + Q+ + NI
Sbjct: 152 TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAF 211
Query: 886 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV--RCMN 943
++FP + S +Q + LL+R+P+ RLG+H A E+K+HPFF ++W L+ + +
Sbjct: 212 GKVRFPKNV-LSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADIDWDLLSKKQIT 270
Query: 944 PP 945
PP
Sbjct: 271 PP 272
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 191 bits (488), Expect = 2e-54
Identities = 111/304 (36%), Positives = 159/304 (52%), Gaps = 63/304 (20%)
Query: 674 IKPLGSGDTGSVHLV-ELCG--SGQYFAMKAMDKGVMLNRNKTKT--------------- 715
+K LG G G V LV ++ G +GQ +AMK + K + R++ +T
Sbjct: 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFI 60
Query: 716 -----------HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG 764
+ LI D+ GG+LF L ++ + E+ V+FY AE+ +AL++LH G
Sbjct: 61 VKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLG 118
Query: 765 IIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEP 824
IIYRDLKPEN+LL GH+ LTDF LS +EKK
Sbjct: 119 IIYRDLKPENILLDEEGHIKLTDFGLS---------KESIDHEKK--------------- 154
Query: 825 MRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANIL 884
+ SF GT EY+APE++ GHT + DWW+ G+L++EML G PF+GK R++T IL
Sbjct: 155 ---AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMIL 211
Query: 885 HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWALV--RC 941
L P S A+ L+ L R+P +RLG+ +G EIK+HPFF ++W + R
Sbjct: 212 KAKLGMPQF--LSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDWNKLYRRE 269
Query: 942 MNPP 945
+ PP
Sbjct: 270 IKPP 273
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 188 bits (480), Expect = 4e-54
Identities = 87/292 (29%), Positives = 139/292 (47%), Gaps = 64/292 (21%)
Query: 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKTK--------------- 714
HF ++ +G G G V +V+ + + FAMK M+K + + +
Sbjct: 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHP 60
Query: 715 ------------THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC 762
++ L+ D GG+L L ++ E+ V+F+ E+V+ALEYLH
Sbjct: 61 FLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHS 118
Query: 763 QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 822
+GII+RD+KP+N+LL GHV +TDF+++
Sbjct: 119 KGIIHRDIKPDNILLDEQGHVHITDFNIAT----------------------------KV 150
Query: 823 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT--- 879
P + S GT Y+APE++ G++ AVDWW+LG+ YE L G P+RG +R
Sbjct: 151 TPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQI 210
Query: 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
A D+ +P++ T A + +LL RDP+ RLG + ++K HP+F
Sbjct: 211 RAKQETADVLYPATWSTE--AIDAINKLLERDPQKRLGDN--LKDLKNHPYF 258
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 188 bits (479), Expect = 4e-53
Identities = 107/330 (32%), Positives = 149/330 (45%), Gaps = 79/330 (23%)
Query: 647 RKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV 706
+ D+ WK L F + LG+G G V + + G+G+Y+A+K + K
Sbjct: 9 KPDTSSWK-------------LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKRE 55
Query: 707 MLNRNKTKTHVC----------------------------LITDYCPGGELFLLLDRQPT 738
+L + K HV + ++ GGELF L R+
Sbjct: 56 IL-KMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHL-RKAG 113
Query: 739 KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798
+ D +FY AE+V+A EYLH + IIYRDLKPEN+LL GHV +TDF +
Sbjct: 114 R-FPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFA------- 165
Query: 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALG 858
KK + + + GT EY+APE+I GH AVDWW +G
Sbjct: 166 ---------KKVPDR--------------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMG 202
Query: 859 ILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS 918
+LLYE + GY PF T + + IL LKFP+ A+ L+ LL D RLG+
Sbjct: 203 VLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPNW--FDGRARDLVKGLLQTDHTKRLGT 260
Query: 919 -HEGANEIKKHPFFKGVNW--ALVRCMNPP 945
G ++K HP+F G NW R P
Sbjct: 261 LKGGVADVKNHPYFHGANWDKLYARYYPAP 290
|
Length = 329 |
| >gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Score = 187 bits (476), Expect = 3e-52
Identities = 116/357 (32%), Positives = 164/357 (45%), Gaps = 81/357 (22%)
Query: 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKTKTHV------------ 717
F IK +G G G V LV + +AMK + K +L RN+ HV
Sbjct: 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQA-AHVKAERDILAEADN 60
Query: 718 --------------CL--ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH 761
L + DY PGG++ LL R + +ED RFY AE+ A+E +H
Sbjct: 61 EWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVH 118
Query: 762 CQGIIYRDLKPENVLLQGNGHVSLTDFDL------------------------------S 791
G I+RD+KP+N+L+ +GH+ LTDF L S
Sbjct: 119 KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWS 178
Query: 792 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSA 851
+ C+ + L +RR K Q ++S VGT YIAPE++ G+T
Sbjct: 179 EIDRCRLKPL-------ERRRKRQHQRC-------LAHSLVGTPNYIAPEVLLRTGYTQL 224
Query: 852 VDWWALGILLYEMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLH 909
DWW++G++LYEML G PF T +T +++ L PS S A L+ RL
Sbjct: 225 CDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC- 283
Query: 910 RDPKSRLGSHEGANEIKKHPFFKGVNWA-LVRCMNPPELDAPLFATDTEKEYKVVDP 965
+ RLG + GA+EIK HPFFKG+++A L+R P + TDT + VDP
Sbjct: 284 CGAEDRLGKN-GADEIKAHPFFKGIDFASLIRRQKAPYIPKITHPTDTSN-FDPVDP 338
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376 |
| >gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Score = 185 bits (470), Expect = 5e-52
Identities = 103/316 (32%), Positives = 160/316 (50%), Gaps = 63/316 (19%)
Query: 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN----------------------- 711
K LG G G V LV +G+Y+AMK + K V++ ++
Sbjct: 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 60
Query: 712 ----KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIY 767
+T +C + +Y GGELF L R+ +V E+ RFY AE+V ALEYLH + ++Y
Sbjct: 61 KYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVY 118
Query: 768 RDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRA 827
RD+K EN++L +GH+ +TDF L CK + ++ +
Sbjct: 119 RDIKLENLMLDKDGHIKITDFGL-----CKEGI----SDGATMK---------------- 153
Query: 828 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 887
+F GT EY+APE++ + AVDWW LG+++YEM+ G PF + ++ F IL ++
Sbjct: 154 --TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 211
Query: 888 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNW--ALVRCMNP 944
++FP + S AK L+ LL +DPK RLG A E+ +H FF +NW + + + P
Sbjct: 212 IRFPRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLP 269
Query: 945 PELDAPLFATDTEKEY 960
P P ++ + Y
Sbjct: 270 PF--KPQVTSEVDTRY 283
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323 |
| >gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 183 bits (466), Expect = 3e-51
Identities = 105/330 (31%), Positives = 155/330 (46%), Gaps = 77/330 (23%)
Query: 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKTK--------------- 714
F+ + +G G G V L + +G+ A+K M K ++ N+ +
Sbjct: 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSE 61
Query: 715 ------------THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC 762
++ L +Y PGG+ LL+ VL ED RFY AE+ A++ LH
Sbjct: 62 WLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNN--LGVLSEDHARFYMAEMFEAVDALHE 119
Query: 763 QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 822
G I+RDLKPEN L+ +GH+ LTDF LS
Sbjct: 120 LGYIHRDLKPENFLIDASGHIKLTDFGLS------------------------------K 149
Query: 823 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 882
+ +NS VG+ +Y+APE++ G G+ VD+W+LG +LYE L G+ PF G T +T+ N
Sbjct: 150 GIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWEN 209
Query: 883 ILH--KDLKFPSSTPT----SLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936
+ + + L+ P S A L+ +L++ DP R GS E +IK HPFFK V+W
Sbjct: 210 LKYWKETLQRPVYDDPRFNLSDEAWDLITKLIN-DPSRRFGSLE---DIKNHPFFKEVDW 265
Query: 937 ALVRCMNPP-------ELDAPLFATDTEKE 959
+R + PP E+D F D E E
Sbjct: 266 NELRELKPPFVPELESEIDTGYF-DDFENE 294
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333 |
| >gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Score = 181 bits (461), Expect = 3e-51
Identities = 114/304 (37%), Positives = 158/304 (51%), Gaps = 65/304 (21%)
Query: 670 HFRPIKPLGSGDTGSVHLV-ELCG--SGQYFAMKAMDKGVMLNRNKTKTH---------- 716
+F +K LG+G G V LV ++ G SG+ +AMK + K ++ + KT H
Sbjct: 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 60
Query: 717 -------------------VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVAL 757
+ LI DY GGELF L ++ + KE V+ Y+ E+V+AL
Sbjct: 61 IRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLAL 118
Query: 758 EYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQN 817
E+LH GIIYRD+K EN+LL NGHV LTDF LS
Sbjct: 119 EHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLS-------------------------- 152
Query: 818 PVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKT 875
F + + + SF GT EY+AP+I+ G GH AVDWW++G+L+YE+L G +PF
Sbjct: 153 KEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDG 212
Query: 876 RQKTFANILHKDLKFPSSTPTSLH--AKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFK 932
+ + A I + LK P + AK ++ RLL +DPK RLG A+EIKKHPFF+
Sbjct: 213 EKNSQAEISRRILKSEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQ 272
Query: 933 GVNW 936
+NW
Sbjct: 273 KINW 276
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290 |
| >gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 183 bits (465), Expect = 3e-51
Identities = 110/321 (34%), Positives = 163/321 (50%), Gaps = 64/321 (19%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKT----------------- 713
F +K +G G G V +V++ +GQ +AMK ++K ML R +T
Sbjct: 3 FEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRW 62
Query: 714 ----------KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ 763
+ ++ L+ DY GG+L LL + + L ED RFY AE+V+A++ +H
Sbjct: 63 ITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDR-LPEDMARFYLAEMVLAIDSVHQL 121
Query: 764 GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAE 823
G ++RD+KP+NVLL NGH+ L DF SCL +A+
Sbjct: 122 GYVHRDIKPDNVLLDKNGHIRLADFG-SCLR-------------------------LLAD 155
Query: 824 PMRASNSFVGTEEYIAPEIIA----GAGHTSA-VDWWALGILLYEMLYGYTPFRGKTRQK 878
SN VGT +YI+PEI+ G G DWW+LG+ +YEMLYG TPF ++ +
Sbjct: 156 GTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE 215
Query: 879 TFANIL-HKD-LKFPSSTP-TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935
T+ I+ HK+ +FP S AK L+ RL+ P++RLG + G + K HPFF+G++
Sbjct: 216 TYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICS-PETRLGRN-GLQDFKDHPFFEGID 273
Query: 936 WALVRCMNPPELDAPLFATDT 956
W +R P + TDT
Sbjct: 274 WDNIRNSTAPYVPEVSSPTDT 294
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331 |
| >gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Score = 180 bits (458), Expect = 2e-50
Identities = 105/291 (36%), Positives = 139/291 (47%), Gaps = 61/291 (20%)
Query: 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKTKTHVC---------------- 718
K +G G G V L + G ++A+K + K +L + K + H+
Sbjct: 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKK-KEQNHIMAERNVLLKNLKHPFLV 59
Query: 719 -------------LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGI 765
+ DY GGELF L R+ + E RFYAAEV A+ YLH I
Sbjct: 60 GLHYSFQTAEKLYFVLDYVNGGELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSLNI 117
Query: 766 IYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPM 825
IYRDLKPEN+LL GHV LTDF L CK + EP
Sbjct: 118 IYRDLKPENILLDSQGHVVLTDFGL-----CKEGV----------------------EPE 150
Query: 826 RASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH 885
+++F GT EY+APE++ + VDWW LG +LYEMLYG PF + + + NILH
Sbjct: 151 ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILH 210
Query: 886 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936
K L+ P + A L+ LLH+D + RLG+ EIK H FF +NW
Sbjct: 211 KPLQLPGGKTVA--ACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINW 259
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 180 bits (457), Expect = 3e-50
Identities = 115/316 (36%), Positives = 161/316 (50%), Gaps = 63/316 (19%)
Query: 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN----------------------- 711
K LG G G V LV SG+Y+AMK + K V++ ++
Sbjct: 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSL 60
Query: 712 ----KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIY 767
+TK +C + +Y GGELF L R+ +V ED RFY AE+V AL+YLH I+Y
Sbjct: 61 KYSFQTKDRLCFVMEYVNGGELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSGKIVY 118
Query: 768 RDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRA 827
RDLK EN++L +GH+ +TDF L CK + T +
Sbjct: 119 RDLKLENLMLDKDGHIKITDFGL-----CKEGITDAATMK-------------------- 153
Query: 828 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 887
+F GT EY+APE++ + AVDWW LG+++YEM+ G PF + +K F IL +D
Sbjct: 154 --TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMED 211
Query: 888 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALV--RCMNP 944
+KFP + S AK L+ LL +DP RLG + A EI +H FF GVNW V + + P
Sbjct: 212 IKFPRT--LSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNWQDVYDKKLVP 269
Query: 945 PELDAPLFATDTEKEY 960
P P ++T+ Y
Sbjct: 270 PF--KPQVTSETDTRY 283
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 180 bits (458), Expect = 8e-50
Identities = 108/337 (32%), Positives = 164/337 (48%), Gaps = 57/337 (16%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKTKTHV------------- 717
F +K +G G G V LV+ +G+ +AMK + K M +++ HV
Sbjct: 3 FHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQL-AHVKAERDVLAESDSP 61
Query: 718 ---------------CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC 762
LI ++ PGG+L +L + T ED RFY AE V+A+E +H
Sbjct: 62 WVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDT--FSEDVTRFYMAECVLAIEAVHK 119
Query: 763 QGIIYRDLKPENVLLQGNGHVSLTDFDLSC-----LTSCKPQLLLPTTNEKKRRHKGQQN 817
G I+RD+KP+N+L+ GH+ L+DF LS S Q LL K R + +
Sbjct: 120 LGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLL-QGKSNKNRIDNRNS 178
Query: 818 PVFMAEPMRASN----------------SFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 861
+ + S+ S VGT +YIAPEI G+ DWW+LG ++
Sbjct: 179 VAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM 238
Query: 862 YEMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH 919
+E L G+ PF + +T+ I++ + L FP S+ A+ L+ RL+ + ++RLG
Sbjct: 239 FECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLI-TNAENRLGRG 297
Query: 920 EGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDT 956
GA+EIK HPFF+GV+W +R + P + TDT
Sbjct: 298 -GAHEIKSHPFFRGVDWDTIRQIRAPFIPQLKSITDT 333
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377 |
| >gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Score = 173 bits (439), Expect = 7e-48
Identities = 106/303 (34%), Positives = 146/303 (48%), Gaps = 60/303 (19%)
Query: 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN----------------------- 711
K +G G G V L + G+ +A+K + K ++LNR
Sbjct: 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVG 60
Query: 712 -----KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGII 766
+T + + D+ GGELF L R+ + E RFYAAE+ AL YLH I+
Sbjct: 61 LHYSFQTTEKLYFVLDFVNGGELFFHLQRERS--FPEPRARFYAAEIASALGYLHSINIV 118
Query: 767 YRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMR 826
YRDLKPEN+LL GHV LTDF L CK + T
Sbjct: 119 YRDLKPENILLDSQGHVVLTDFGL-----CKEGIAQSDT--------------------- 152
Query: 827 ASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 886
+ +F GT EY+APE+I + + VDWW LG +LYEMLYG PF + + + NILHK
Sbjct: 153 -TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHK 211
Query: 887 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA-LVRCMNPP 945
L SL A ++ LL +D + RLG+ E EI++HPFF+ ++W L + PP
Sbjct: 212 PLVLRPG--ASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLSWTDLEQKKIPP 269
Query: 946 ELD 948
+
Sbjct: 270 PFN 272
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 172 bits (437), Expect = 1e-47
Identities = 111/317 (35%), Positives = 166/317 (52%), Gaps = 64/317 (20%)
Query: 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKT--------------------- 713
K LG G G V LV+ +G+Y+AMK + K V++ +++
Sbjct: 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 60
Query: 714 ----KTH--VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GII 766
+TH +C + +Y GGELF L R+ +V ED RFY AE+V AL+YLH + ++
Sbjct: 61 KYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVV 118
Query: 767 YRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMR 826
YRDLK EN++L +GH+ +TDF L CK +G ++ M
Sbjct: 119 YRDLKLENLMLDKDGHIKITDFGL-----CK---------------EGIKDGATM----- 153
Query: 827 ASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 886
+F GT EY+APE++ + AVDWW LG+++YEM+ G PF + +K F IL +
Sbjct: 154 --KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME 211
Query: 887 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRL-GSHEGANEIKKHPFFKGVNWALV--RCMN 943
+++FP + S AK L+ LL +DPK RL G + A EI +H FF G+ W V + +
Sbjct: 212 EIRFPRT--LSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQDVYEKKLV 269
Query: 944 PPELDAPLFATDTEKEY 960
PP P ++T+ Y
Sbjct: 270 PPF--KPQVTSETDTRY 284
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 172 bits (436), Expect = 2e-47
Identities = 109/309 (35%), Positives = 152/309 (49%), Gaps = 61/309 (19%)
Query: 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN------------------------- 711
+G G G V V + + +A+K + K +++R+
Sbjct: 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKF 60
Query: 712 --KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRD 769
++ + L+ + GGELF L R+ RFY AE++ ALE LH +IYRD
Sbjct: 61 SFQSPEKLYLVLAFINGGELFHHLQREGR--FDLSRARFYTAELLCALENLHKFNVIYRD 118
Query: 770 LKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASN 829
LKPEN+LL GH++L DF L CK L ++ K +N
Sbjct: 119 LKPENILLDYQGHIALCDFGL-----CK----LNMKDDDK------------------TN 151
Query: 830 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 889
+F GT EY+APE++ G G+T AVDWW LG+LLYEML G PF + + + IL + L+
Sbjct: 152 TFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLR 211
Query: 890 FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA--LVRCMNPPEL 947
FP AK L+ LL RDP RLG + GA EIK HPFF ++W L++ + PP
Sbjct: 212 FPDGFDRD--AKDLLIGLLSRDPTRRLGYN-GAQEIKNHPFFSQLSWKKLLMKGIQPPFK 268
Query: 948 DAPLFATDT 956
A A DT
Sbjct: 269 PAVSSAIDT 277
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 170 bits (432), Expect = 6e-47
Identities = 105/302 (34%), Positives = 152/302 (50%), Gaps = 66/302 (21%)
Query: 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN----------------------- 711
K LG G G V L EL G G+YFA+KA+ K V+L +
Sbjct: 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTH 60
Query: 712 -----KTKTHVCLITDYCPGGEL-FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGI 765
+TK H+ + ++ GG+L F + D+ + + FYAAE+V L++LH +GI
Sbjct: 61 LYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYR---ATFYAAEIVCGLQFLHSKGI 117
Query: 766 IYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPM 825
IYRDLK +NV+L +GH+ + DF + CK + G
Sbjct: 118 IYRDLKLDNVMLDRDGHIKIADFGM-----CKENVF------------GDN--------- 151
Query: 826 RASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH 885
RAS +F GT +YIAPEI+ G +T +VDWW+ G+LLYEML G +PF G + F +I
Sbjct: 152 RAS-TFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRV 210
Query: 886 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV--RCMN 943
+P + +K ++ +L RDP RLG I+ HPFFK +NW + R ++
Sbjct: 211 DTPHYPRW--ITKESKDILEKLFERDPTRRLGV---VGNIRGHPFFKTINWTALEKRELD 265
Query: 944 PP 945
PP
Sbjct: 266 PP 267
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Score = 170 bits (433), Expect = 1e-46
Identities = 108/313 (34%), Positives = 162/313 (51%), Gaps = 53/313 (16%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKT----------------- 713
F +K +G G G V LV+ +G +AMK + K ML + +
Sbjct: 3 FESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAW 62
Query: 714 ----------KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ 763
K ++ LI ++ PGG++ LL ++ T L E+A +FY AE V+A++ +H
Sbjct: 63 VVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDT--LSEEATQFYIAETVLAIDAIHQL 120
Query: 764 GIIYRDLKPENVLLQGNGHVSLTDFDLSC-------------LTSCKPQ-LLLPTTNEKK 809
G I+RD+KP+N+LL GHV L+DF L LT P N K+
Sbjct: 121 GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKR 180
Query: 810 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYT 869
+ ++N +A S VGT +YIAPE+ G+ DWW+LG+++YEML GY
Sbjct: 181 KAETWKKNRRQLAY------STVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234
Query: 870 PFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927
PF +T Q+T+ +++ + L FP P S AK L+ R D ++R+GS+ G EIK
Sbjct: 235 PFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSN-GVEEIKS 292
Query: 928 HPFFKGVNWALVR 940
HPFF+GV+W +R
Sbjct: 293 HPFFEGVDWGHIR 305
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360 |
| >gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Score = 168 bits (427), Expect = 3e-46
Identities = 95/295 (32%), Positives = 139/295 (47%), Gaps = 60/295 (20%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK------------------ 712
F + LG G G V L E G+ + +A+K + K V++ +
Sbjct: 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPP 61
Query: 713 --TKTHVCLIT--------DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC 762
T+ H C T +Y GG+L + Q KE FYAAE+ + L +LH
Sbjct: 62 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI--QQVGKFKEPHAVFYAAEIAIGLFFLHS 119
Query: 763 QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 822
+GIIYRDLK +NV+L GH+ + DF + CK + T
Sbjct: 120 KGIIYRDLKLDNVMLDAEGHIKIADFGM-----CKENIFGGKT----------------- 157
Query: 823 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 882
+ +F GT +YIAPEIIA + +VDWWA G+LLYEML G PF G+ + F +
Sbjct: 158 -----TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQS 212
Query: 883 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNW 936
I+ ++ +P S S A + LL + P RLG G +I++H FF+ ++W
Sbjct: 213 IMEHNVSYPKS--LSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDW 265
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 166 bits (423), Expect = 4e-46
Identities = 88/302 (29%), Positives = 134/302 (44%), Gaps = 59/302 (19%)
Query: 677 LGSGDTGSVHLVELCGSGQYFAMKAMDK----------GVMLNRN--------------- 711
LG G G V ++ +G+ +A K +DK + +
Sbjct: 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAY 60
Query: 712 --KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRD 769
+TK +CL+ GG+L + E FYAA+++ LE+LH + I+YRD
Sbjct: 61 AFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRD 120
Query: 770 LKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASN 829
LKPENVLL +G+V ++D L+ KG +
Sbjct: 121 LKPENVLLDDHGNVRISDLGLAV------------------ELKGGKKI----------K 152
Query: 830 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 889
GT Y+APE++ G + +VDW+ALG LYEM+ G +PFR + + + + L+
Sbjct: 153 GRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE 212
Query: 890 FPSSTPTSL--HAKQLMYRLLHRDPKSRLGSHEG-ANEIKKHPFFKGVNWALVRC-MNPP 945
P AK L LL +DP+ RLG G A+E+++HP FK +NW + M P
Sbjct: 213 MAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRRLEAGMLEP 272
Query: 946 EL 947
Sbjct: 273 PF 274
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 167 bits (425), Expect = 4e-46
Identities = 98/319 (30%), Positives = 162/319 (50%), Gaps = 67/319 (21%)
Query: 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN----------------------- 711
K LG G G V L EL G+ Q+FA+KA+ K V+L +
Sbjct: 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 60
Query: 712 -----KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGII 766
+TK ++ + +Y GG+L + Q FYAAE++ L++LH +GI+
Sbjct: 61 LYCTFQTKENLFFVMEYLNGGDLMFHI--QSCHKFDLPRATFYAAEIICGLQFLHSKGIV 118
Query: 767 YRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMR 826
YRDLK +N+LL +GH+ + DF + CK +L + K
Sbjct: 119 YRDLKLDNILLDTDGHIKIADFGM-----CKENML----GDAK----------------- 152
Query: 827 ASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 886
+ +F GT +YIAPEI+ G + ++VDWW+ G+LLYEML G +PF G ++ F +I
Sbjct: 153 -TCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD 211
Query: 887 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV--RCMNP 944
+ +P + AK ++ +L R+P+ RLG +I++HPFF+ ++W+ + R + P
Sbjct: 212 NPCYPRW--LTREAKDILVKLFVREPERRLGVK---GDIRQHPFFREIDWSALEEREIEP 266
Query: 945 ---PELDAPLFATDTEKEY 960
P++ + ++ +KE+
Sbjct: 267 PFKPKVKSANDCSNFDKEF 285
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Score = 167 bits (424), Expect = 7e-46
Identities = 110/331 (33%), Positives = 154/331 (46%), Gaps = 71/331 (21%)
Query: 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK--------------------TK 714
K LG G G V L EL G+ + +A+K + K V+L + T
Sbjct: 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTA 60
Query: 715 THVCLIT--------DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGII 766
H C T +Y GG+L + Q ++ E RFYAAEV +AL +LH G+I
Sbjct: 61 LHCCFQTKDRLFFVMEYVNGGDLMFQI--QRSRKFDEPRSRFYAAEVTLALMFLHRHGVI 118
Query: 767 YRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMR 826
YRDLK +N+LL GH L DF + CK +L
Sbjct: 119 YRDLKLDNILLDAEGHCKLADFGM-----CKEGIL----------------------NGV 151
Query: 827 ASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 886
+ +F GT +YIAPEI+ + +VDWWALG+L+YEM+ G PF F +ILH
Sbjct: 152 TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD 211
Query: 887 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLG---SHEGANEIKKHPFFKGVNWALV--RC 941
D+ +P S A ++ + ++P RLG S G + IK+HPFFK ++W L+ R
Sbjct: 212 DVLYP--VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDWVLLEQRK 269
Query: 942 MNPP-------ELDAPLFATDTEKEYKVVDP 965
+ PP + D F D KE V+ P
Sbjct: 270 IKPPFKPKIKTKRDVNNFDQDFTKEEPVLTP 300
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321 |
| >gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Score = 165 bits (419), Expect = 4e-45
Identities = 102/310 (32%), Positives = 154/310 (49%), Gaps = 72/310 (23%)
Query: 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN-----KTKTHV-------------- 717
+G G V LVEL + + +AMK + K ++ + +T+ HV
Sbjct: 3 IGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLH 62
Query: 718 -C--------LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYR 768
C + ++ GG+L + RQ + L E+ RFY+AE+ +AL +LH +GIIYR
Sbjct: 63 SCFQTESRLFFVIEFVSGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHERGIIYR 120
Query: 769 DLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRAS 828
DLK +NVLL GH+ LTD+ + CK + P +
Sbjct: 121 DLKLDNVLLDAEGHIKLTDYGM-----CKEGI----------------------RPGDTT 153
Query: 829 NSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF---------RGKTRQKT 879
++F GT YIAPEI+ G + +VDWWALG+L++EM+ G +PF T
Sbjct: 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYL 213
Query: 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH--EGANEIKKHPFFKGVNWA 937
F IL K ++ P S S+ A ++ L++DPK RLG H G +IK HPFF+ ++W
Sbjct: 214 FQVILEKQIRIPRS--LSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDWD 271
Query: 938 LV--RCMNPP 945
L+ + + PP
Sbjct: 272 LLEQKQVLPP 281
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329 |
| >gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Score = 165 bits (419), Expect = 4e-45
Identities = 96/304 (31%), Positives = 139/304 (45%), Gaps = 67/304 (22%)
Query: 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKT----------------------- 713
+G G G V +V +G +AMK M K V+L +
Sbjct: 9 VGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQY 68
Query: 714 ----KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRD 769
K ++ L+ +Y PGG+L LL+R + ED +FY AE+V+A+ +H G ++RD
Sbjct: 69 AFQDKDNLYLVMEYQPGGDLLSLLNRYEDQ-FDEDMAQFYLAELVLAIHSVHQMGYVHRD 127
Query: 770 LKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASN 829
+KPENVL+ GH+ L DF + + A M S
Sbjct: 128 IKPENVLIDRTGHIKLADFGSAARLT--------------------------ANKMVNSK 161
Query: 830 SFVGTEEYIAPEII------AGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883
VGT +YIAPE++ + DWW+LG++ YEM+YG +PF T KT+ NI
Sbjct: 162 LPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNI 221
Query: 884 L-HKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRC 941
+ + LKFP S L+ LL K RLG +EG + HPFF ++W +R
Sbjct: 222 MNFQRFLKFPEDPKVSSDFLDLIQSLL-CGQKERLG-YEG---LCCHPFFSKIDWNNIRN 276
Query: 942 MNPP 945
PP
Sbjct: 277 SLPP 280
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 164 bits (417), Expect = 6e-45
Identities = 99/301 (32%), Positives = 145/301 (48%), Gaps = 63/301 (20%)
Query: 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK--------------------TKTH 716
LG G G V L L SG+ +A+K + K V+L + T+ +
Sbjct: 3 LGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLY 62
Query: 717 VCLIT--------DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYR 768
C T ++ GG+L + Q ++ E RFYAAE+ AL +LH +GIIYR
Sbjct: 63 CCFQTPDRLFFVMEFVNGGDLMFHI--QKSRRFDEARARFYAAEITSALMFLHDKGIIYR 120
Query: 769 DLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRAS 828
DLK +NVLL GH L DF + CK + G + +
Sbjct: 121 DLKLDNVLLDHEGHCKLADFGM-----CKEGI-----------FNG-----------KTT 153
Query: 829 NSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDL 888
++F GT +YIAPEI+ + +VDWWA+G+LLYEML G+ PF + F IL+ ++
Sbjct: 154 STFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV 213
Query: 889 KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE--GANEIKKHPFFKGVNWALV--RCMNP 944
+P T S A ++ + ++P RLGS G I +HPFFK ++W + R + P
Sbjct: 214 VYP--TWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDWEKLNRRQIEP 271
Query: 945 P 945
P
Sbjct: 272 P 272
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Score = 164 bits (418), Expect = 2e-44
Identities = 103/327 (31%), Positives = 152/327 (46%), Gaps = 68/327 (20%)
Query: 654 KAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKT 713
KA +KI ++ + F IK +G G G V LV S Q +AMK + K M+ R+ +
Sbjct: 30 KAAEKITKL--RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDS 87
Query: 714 ---------------------------KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAV 746
++ ++ +Y PGG+L L+ + E
Sbjct: 88 AFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNYD---IPEKWA 144
Query: 747 RFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 806
RFY AEVV+AL+ +H G I+RD+KP+N+LL +GH+ L DF +C+
Sbjct: 145 RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG-TCMK------------ 191
Query: 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS----AVDWWALGILLY 862
A M ++ VGT +YI+PE++ G DWW++G+ LY
Sbjct: 192 -------------MDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLY 238
Query: 863 EMLYGYTPFRGKTRQKTFANIL-HKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 920
EML G TPF + T++ I+ HK+ L FP S AK L+ L D + RLG +
Sbjct: 239 EMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFL-TDREVRLGRN- 296
Query: 921 GANEIKKHPFFKG--VNWALVRCMNPP 945
G +EIK HPFFK + +R P
Sbjct: 297 GVDEIKSHPFFKNDQWTFDNIRETVAP 323
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370 |
| >gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Score = 162 bits (411), Expect = 4e-44
Identities = 100/290 (34%), Positives = 138/290 (47%), Gaps = 59/290 (20%)
Query: 675 KPLGSGDTGSVHLVELCGSGQYFAMKAM----------DKGVMLNRN------------- 711
K +G G G V L +++A+K + +K +M RN
Sbjct: 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 60
Query: 712 -----KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGII 766
+T + + DY GGELF L R+ + E RFYAAE+ AL YLH I+
Sbjct: 61 LHFSFQTADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLNIV 118
Query: 767 YRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMR 826
YRDLKPEN+LL GH+ LTDF L CK + E
Sbjct: 119 YRDLKPENILLDSQGHIVLTDFGL-----CKENI----------------------EHNG 151
Query: 827 ASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 886
+++F GT EY+APE++ + VDWW LG +LYEMLYG PF + + + NIL+K
Sbjct: 152 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK 211
Query: 887 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936
L+ + S A+ L+ LL +D RLG+ + EIK H FF +NW
Sbjct: 212 PLQLKPNITNS--ARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINW 259
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325 |
| >gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Score = 160 bits (407), Expect = 2e-43
Identities = 102/310 (32%), Positives = 155/310 (50%), Gaps = 64/310 (20%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKT----------------- 713
F IK +G G G V +V++ + + +AMK ++K ML R +T
Sbjct: 3 FEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQW 62
Query: 714 ----------KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ 763
+ ++ L+ DY GG+L LL + + L ED RFY AE+V+A+ +H
Sbjct: 63 ITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDR-LPEDMARFYIAEMVLAIHSIHQL 121
Query: 764 GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAE 823
++RD+KP+NVLL NGH+ L DF SCL +
Sbjct: 122 HYVHRDIKPDNVLLDMNGHIRLADFG-SCLK-------------------------MNQD 155
Query: 824 PMRASNSFVGTEEYIAPEIIA----GAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878
S+ VGT +YI+PEI+ G G + DWW+LG+ +YEMLYG TPF ++ +
Sbjct: 156 GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE 215
Query: 879 TFANILHKD--LKFPSS-TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935
T+ I++ + +FPS T S AK L+ RL+ + RLG + G + KKH FF+G++
Sbjct: 216 TYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRER-RLGQN-GIEDFKKHAFFEGID 273
Query: 936 WALVRCMNPP 945
W +R + P
Sbjct: 274 WENIRNLEAP 283
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331 |
| >gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Score = 158 bits (400), Expect = 3e-42
Identities = 103/315 (32%), Positives = 159/315 (50%), Gaps = 53/315 (16%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKT--------------- 713
+ F +K +G G G V LV+ +G +AMK + K ML + +
Sbjct: 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADS 60
Query: 714 ------------KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH 761
K ++ LI ++ PGG++ LL ++ T L E+ +FY AE V+A++ +H
Sbjct: 61 LWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDT--LTEEETQFYIAETVLAIDSIH 118
Query: 762 CQGIIYRDLKPENVLLQGNGHVSLTDFDLSC-------------LTSCKPQ-LLLPTTNE 807
G I+RD+KP+N+LL GHV L+DF L L P N
Sbjct: 119 QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNS 178
Query: 808 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYG 867
K++ ++N +A S VGT +YIAPE+ G+ DWW+LG+++YEML G
Sbjct: 179 KRKAETWKRNRRQLA------FSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG 232
Query: 868 YTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 925
Y PF +T Q+T+ +++ + L FP P S AK L+ R + + R+G+ G EI
Sbjct: 233 YPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGA-PGVEEI 290
Query: 926 KKHPFFKGVNWALVR 940
K +PFF+GV+W +R
Sbjct: 291 KTNPFFEGVDWEHIR 305
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363 |
| >gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Score = 155 bits (392), Expect = 1e-41
Identities = 110/326 (33%), Positives = 167/326 (51%), Gaps = 70/326 (21%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKT--------------- 713
+ F +K +G G G V +V+L + + FAMK ++K ML R +T
Sbjct: 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDN 60
Query: 714 ------------KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH 761
+ ++ L+ DY GG+L LL + + L ED RFY AE+V+A++ +H
Sbjct: 61 QWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDR-LPEDMARFYLAEMVIAIDSVH 119
Query: 762 CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFM 821
++RD+KP+N+L+ NGH+ L DF SCL M
Sbjct: 120 QLHYVHRDIKPDNILMDMNGHIRLADFG-SCLK-------------------------LM 153
Query: 822 AEPMRASNSFVGTEEYIAPEIIA----GAG-HTSAVDWWALGILLYEMLYGYTPFRGKTR 876
+ S+ VGT +YI+PEI+ G G + DWW+LG+ +YEMLYG TPF ++
Sbjct: 154 EDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL 213
Query: 877 QKTFANIL-HKD-LKFPSS-TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933
+T+ I+ HK+ +FP+ T S AK L+ RL+ + RLG + G + K+HPFF G
Sbjct: 214 VETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLIC-SREHRLGQN-GIEDFKQHPFFTG 271
Query: 934 VNWALVR-CMNP--PELDAPLFATDT 956
++W +R C P PE+ +P TDT
Sbjct: 272 IDWDNIRNCEAPYIPEVSSP---TDT 294
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332 |
| >gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Score = 153 bits (388), Expect = 4e-41
Identities = 99/306 (32%), Positives = 146/306 (47%), Gaps = 62/306 (20%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK------------------ 712
F + LG G G V L E G+ + +A+K + K V++ +
Sbjct: 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPP 61
Query: 713 --TKTHVCLIT--------DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC 762
T+ H C T +Y GG+L + Q KE FYAAE+ V L +LH
Sbjct: 62 FLTQLHSCFQTVDRLYFVMEYVNGGDLMYHI--QQVGKFKEPQAVFYAAEISVGLFFLHR 119
Query: 763 QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 822
+GIIYRDLK +NV+L GH+ + DF + CK ++ T
Sbjct: 120 RGIIYRDLKLDNVMLDSEGHIKIADFGM-----CKEHMVDGVT----------------- 157
Query: 823 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 882
+ +F GT +YIAPEIIA + +VDWWA G+LLYEML G PF G+ + F +
Sbjct: 158 -----TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQS 212
Query: 883 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLG-SHEGANEIKKHPFFKGVNWALV-- 939
I+ ++ +P S S A + L+ + P RLG EG +I++H FF+ ++W +
Sbjct: 213 IMEHNVSYPKS--LSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDWDKLEN 270
Query: 940 RCMNPP 945
R + PP
Sbjct: 271 REIQPP 276
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 149 bits (378), Expect = 8e-41
Identities = 74/280 (26%), Positives = 109/280 (38%), Gaps = 92/280 (32%)
Query: 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-------------------------N 711
LG G G+V+L +G+ A+K + K +
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60
Query: 712 KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLK 771
+ + H+ L+ +YC GG L LL K L ED + +++ LEYLH GII+RDLK
Sbjct: 61 EDENHLYLVMEYCEGGSLKDLLKENEGK-LSEDEILRILLQILEGLEYLHSNGIIHRDLK 119
Query: 772 PENVLLQ-GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNS 830
PEN+LL NG V L DF LS + +
Sbjct: 120 PENILLDSDNGKVKLADFGLSK---------------------------LLTSDKSLLKT 152
Query: 831 FVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 889
VGT Y+APE++ G G+ + D W+LG++LYE+
Sbjct: 153 IVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------- 187
Query: 890 FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 929
K L+ ++L +DP+ R A EI +H
Sbjct: 188 --------PELKDLIRKMLQKDPEKRP----SAKEILEHL 215
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Score = 151 bits (383), Expect = 8e-41
Identities = 100/310 (32%), Positives = 150/310 (48%), Gaps = 69/310 (22%)
Query: 677 LGSGDTGSVHLVELCGSGQYFAMKAMDK-------GVMLNRNK----------------- 712
+G G G V+ +G+ +AMK +DK G L N+
Sbjct: 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 61
Query: 713 ------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGII 766
T + I D GG+L L + V E +RFYAAE+++ LE++H + ++
Sbjct: 62 MSYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNRFVV 119
Query: 767 YRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMR 826
YRDLKP N+LL +GHV ++D L+C S KK+ H
Sbjct: 120 YRDLKPANILLDEHGHVRISDLGLACDFS------------KKKPH-------------- 153
Query: 827 ASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEMLYGYTPFRG-KTRQKTFAN-- 882
AS VGT Y+APE++ G + S+ DW++LG +L+++L G++PFR KT+ K +
Sbjct: 154 AS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM 210
Query: 883 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC 941
L ++ P S S + L+ LL RD RLG GA E+K+HPFF+ ++W +V
Sbjct: 211 TLTMAVELPDS--FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDWQMVFL 268
Query: 942 MN-PPELDAP 950
PP L P
Sbjct: 269 QKYPPPLIPP 278
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278 |
| >gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Score = 153 bits (387), Expect = 8e-41
Identities = 103/308 (33%), Positives = 154/308 (50%), Gaps = 70/308 (22%)
Query: 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----LNRNKTKTHV-------------- 717
+G G V LV L + Q +AMK + K ++ ++ +T+ HV
Sbjct: 3 IGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLH 62
Query: 718 -C--------LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYR 768
C L+ +Y GG+L + RQ + L E+ RFYAAE+ +AL +LH +GIIYR
Sbjct: 63 SCFQTTSRLFLVIEYVNGGDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHERGIIYR 120
Query: 769 DLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRAS 828
DLK +NVLL +GH+ LTD+ + CK L P +
Sbjct: 121 DLKLDNVLLDADGHIKLTDYGM-----CKEGL----------------------GPGDTT 153
Query: 829 NSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF-------RGKTRQKTFA 881
++F GT YIAPEI+ G + +VDWWALG+L++EM+ G +PF T F
Sbjct: 154 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQ 213
Query: 882 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS--HEGANEIKKHPFFKGVNWALV 939
IL K ++ P S+ A ++ L++DPK RLG G ++IK H FF+ ++W L+
Sbjct: 214 VILEKPIRIPRF--LSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWDLL 271
Query: 940 --RCMNPP 945
+ + PP
Sbjct: 272 EKKQVTPP 279
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327 |
| >gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Score = 151 bits (383), Expect = 2e-40
Identities = 96/295 (32%), Positives = 140/295 (47%), Gaps = 60/295 (20%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK------------------ 712
F + LG G G V L E G+ + +A+K + K V++ +
Sbjct: 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPP 61
Query: 713 --TKTHVCLIT--------DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC 762
T+ H C T +Y GG+L + Q KE FYAAE+ + L +LH
Sbjct: 62 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYQI--QQVGRFKEPHAVFYAAEIAIGLFFLHS 119
Query: 763 QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 822
+GIIYRDLK +NV+L GH+ + DF + CK + T
Sbjct: 120 KGIIYRDLKLDNVMLDSEGHIKIADFGM-----CKENMWDGVT----------------- 157
Query: 823 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 882
+ +F GT +YIAPEIIA + +VDWWA G+LLYEML G PF G+ + F +
Sbjct: 158 -----TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS 212
Query: 883 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLG-SHEGANEIKKHPFFKGVNW 936
I+ ++ +P S S A + L+ + P RLG EG +IK+H FF+ ++W
Sbjct: 213 IMEHNVAYPKS--MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDW 265
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323 |
| >gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Score = 150 bits (381), Expect = 5e-40
Identities = 88/239 (36%), Positives = 129/239 (53%), Gaps = 42/239 (17%)
Query: 712 KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLK 771
+T++ + + +Y GG+L + RQ + L E+ RFY+AE+ +AL YLH +GIIYRDLK
Sbjct: 66 QTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLK 123
Query: 772 PENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSF 831
+NVLL GH+ LTD+ + CK L P +++F
Sbjct: 124 LDNVLLDSEGHIKLTDYGM-----CKEGL----------------------RPGDTTSTF 156
Query: 832 VGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF---------RGKTRQKTFAN 882
GT YIAPEI+ G + +VDWWALG+L++EM+ G +PF T F
Sbjct: 157 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV 216
Query: 883 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLG--SHEGANEIKKHPFFKGVNWALV 939
IL K ++ P S S+ A ++ L++DPK RLG G +I+ HPFF+ V+W L+
Sbjct: 217 ILEKQIRIPRS--LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDLM 273
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329 |
| >gnl|CDD|237425 PRK13557, PRK13557, histidine kinase; Provisional | Back alignment and domain information |
|---|
Score = 152 bits (387), Expect = 5e-39
Identities = 60/144 (41%), Positives = 84/144 (58%), Gaps = 3/144 (2%)
Query: 446 DDDYESDDERPDSVDD--KVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDS 503
R SVD+ + R I A +E ++TDP PDNPI+FA+ +
Sbjct: 3 SPPEPRPHGRAPSVDESAAGDVSDHRSDIFFAA-VETTRMPMIVTDPNQPDNPIVFANRA 61
Query: 504 FLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNL 563
FLE+T Y+ EEI+G NCRFLQGPETD ATV ++R AI + ++ +++NY K G FWN
Sbjct: 62 FLEMTGYAAEEIIGNNCRFLQGPETDRATVAEVRDAIAERREIATEILNYRKDGSSFWNA 121
Query: 564 FHLQPMRDQKGEVQYFIGVQLDGS 587
+ P+ + G++ YF G QLD S
Sbjct: 122 LFVSPVYNDAGDLVYFFGSQLDVS 145
|
Length = 540 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 144 bits (367), Expect = 9e-39
Identities = 69/275 (25%), Positives = 117/275 (42%), Gaps = 58/275 (21%)
Query: 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK----------------- 712
+ IK +G G G V+LV G+ + +K +D M + +
Sbjct: 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPN 60
Query: 713 ---------TKTHVCLITDYCPGGELFLLLDRQPTKV--LKEDAVRFYAAEVVVALEYLH 761
K +C++ +Y GG+L + +Q + E+ + + ++ +AL+YLH
Sbjct: 61 IIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH 120
Query: 762 CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFM 821
+ I++RD+KP+N+ L NG V L DF +S K + V +
Sbjct: 121 SRKILHRDIKPQNIFLTSNGLVKLGDFGIS---------------------KVLSSTVDL 159
Query: 822 AEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881
A + VGT Y++PE+ + D W+LG +LYE+ PF G+ +
Sbjct: 160 A------KTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELAL 213
Query: 882 NILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSR 915
IL PS + L + L+ LL +DP+ R
Sbjct: 214 KILKGQYPPIPSQYSSEL--RNLVSSLLQKDPEER 246
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|237427 PRK13559, PRK13559, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 147 bits (373), Expect = 1e-38
Identities = 56/125 (44%), Positives = 76/125 (60%)
Query: 464 RQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFL 523
R G +E+ ITDP PD PI+ A+ +FL+LT Y+ EE++GRNCRFL
Sbjct: 35 RDFRGASGRLFEQAMEQTRMAMCITDPHQPDLPIVLANQAFLDLTGYAAEEVVGRNCRFL 94
Query: 524 QGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQ 583
QG TDP V KIRAAI + ++ V+L+NY K G+ FWN HL P+ + G + YF G Q
Sbjct: 95 QGAATDPIAVAKIRAAIAAEREIVVELLNYRKDGEPFWNALHLGPVYGEDGRLLYFFGSQ 154
Query: 584 LDGSE 588
D ++
Sbjct: 155 WDVTD 159
|
Length = 361 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 143 bits (363), Expect = 4e-38
Identities = 88/296 (29%), Positives = 133/296 (44%), Gaps = 58/296 (19%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDK---------GVMLNRNK--------- 712
FR + LG G G V ++ +G+ +A K ++K + LN +
Sbjct: 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 61
Query: 713 ---------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ 763
TK +CL+ GG+L + E+ FYAAE+ LE LH +
Sbjct: 62 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE 121
Query: 764 GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAE 823
I+YRDLKPEN+LL GH+ ++D L+ + E
Sbjct: 122 RIVYRDLKPENILLDDYGHIRISDLGLAV-------------------------EIPEGE 156
Query: 824 PMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883
+R VGT Y+APE++ +T + DWW LG L+YEM+ G +PFR + + +
Sbjct: 157 TIRGR---VGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEV 213
Query: 884 LHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNW 936
+ + S S A+ + +LL +DP RLG EGA E+K HPFF+ N+
Sbjct: 214 ERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANF 269
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Score = 145 bits (368), Expect = 7e-38
Identities = 114/353 (32%), Positives = 165/353 (46%), Gaps = 71/353 (20%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKT----------------- 713
F IK LG G G V L + +AMK + K +L RN+
Sbjct: 3 FVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEW 62
Query: 714 ----------KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ 763
K ++ + DY PGG++ LL R + ED RFY AE+ A+E +H
Sbjct: 63 VVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKM 120
Query: 764 GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKG----QQNPV 819
G I+RD+KP+N+L+ +GH+ LTDF L C T++ K G Q +
Sbjct: 121 GFIHRDIKPDNILIDRDGHIKLTDFGL-CTG-------FRWTHDSKYYQSGDHVRQDSMD 172
Query: 820 FMAE--------------PM--RAS--------NSFVGTEEYIAPEIIAGAGHTSAVDWW 855
F E P+ RA+ +S VGT YIAPE++ G+T DWW
Sbjct: 173 FSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWW 232
Query: 856 ALGILLYEMLYGYTPFRGKTRQKTFANIL--HKDLKFPSSTPTSLHAKQLMYRLLHRDPK 913
++G++LYEML G PF +T +T ++ L P S A L+ +L R P+
Sbjct: 233 SVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPE 291
Query: 914 SRLGSHEGANEIKKHPFFKGVNWAL-VRCMNPPELDAPLFATDTEKEYKVVDP 965
RLG + GA+EIK HPFFK ++++ +R + P + TDT + VDP
Sbjct: 292 DRLGKN-GADEIKAHPFFKTIDFSSDLRQQSAPYIPKITHPTDTSN-FDPVDP 342
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382 |
| >gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Score = 142 bits (359), Expect = 1e-37
Identities = 98/311 (31%), Positives = 146/311 (46%), Gaps = 68/311 (21%)
Query: 677 LGSGDTGSVHLVELCGSGQYFAMKAMDK-------GVMLNRNK----------------- 712
+G G G V+ +G+ +AMK +DK G L N+
Sbjct: 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 61
Query: 713 ------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGII 766
T +C I D GG+L L + V E +RFYA E+++ LE++H + ++
Sbjct: 62 MTYAFHTPDKLCFILDLMNGGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHNRFVV 119
Query: 767 YRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMR 826
YRDLKP N+LL +GHV ++D L+C S KK+ H
Sbjct: 120 YRDLKPANILLDEHGHVRISDLGLACDFS------------KKKPHAS------------ 155
Query: 827 ASNSFVGTEEYIAPEII-AGAGHTSAVDWWALGILLYEMLYGYTPFRG-KTRQKTFAN-- 882
VGT Y+APE++ G + S+ DW++LG +L+++L G++PFR KT+ K +
Sbjct: 156 -----VGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM 210
Query: 883 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC 941
L +++ P S L K L+ LL RD RLG GA E+K+H FFKG++W V
Sbjct: 211 TLTVNVELPDSFSPEL--KSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQQVYL 268
Query: 942 MNPPELDAPLF 952
P P
Sbjct: 269 QKYPPPLIPPR 279
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279 |
| >gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Score = 143 bits (362), Expect = 4e-37
Identities = 99/316 (31%), Positives = 153/316 (48%), Gaps = 66/316 (20%)
Query: 654 KAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKT 713
K ++KI Q+ + + +K +G G G V LV S + +AMK + K M+ R+ +
Sbjct: 30 KIVRKI--RKLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDS 87
Query: 714 ---------------------------KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAV 746
++ ++ +Y PGG+L L+ + E
Sbjct: 88 AFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD---VPEKWA 144
Query: 747 RFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 806
+FY AEVV+AL+ +H G+I+RD+KP+N+LL +GH+ L DF +C+
Sbjct: 145 KFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFG-TCM------------- 190
Query: 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGILLY 862
K G M ++ VGT +YI+PE++ G + DWW++G+ L+
Sbjct: 191 --KMDETG----------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLF 238
Query: 863 EMLYGYTPFRGKTRQKTFANIL-HKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 920
EML G TPF + T++ I+ HK+ L FP S HAK L+ L D + RLG +
Sbjct: 239 EMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFL-TDREVRLGRN- 296
Query: 921 GANEIKKHPFFKGVNW 936
G EIK+HPFFK W
Sbjct: 297 GVEEIKQHPFFKNDQW 312
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 140 bits (353), Expect = 7e-37
Identities = 93/314 (29%), Positives = 147/314 (46%), Gaps = 64/314 (20%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN------------------- 711
FR + LG G G V ++ +G+ +A K ++K + R
Sbjct: 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQF 61
Query: 712 --------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ 763
+TK +CL+ GG+L + +E+ FYAAE++ LE LH +
Sbjct: 62 VVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE 121
Query: 764 GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAE 823
+YRDLKPEN+LL GH+ ++D L+ + +P + R
Sbjct: 122 NTVYRDLKPENILLDDYGHIRISDLGLA--------VKIPEGESIRGR------------ 161
Query: 824 PMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK----TRQKT 879
VGT Y+APE++ +T + D+W LG L+YEM+ G +PFRG+ R++
Sbjct: 162 --------VGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEV 213
Query: 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWAL 938
+L + + S S AK + LL +DPK RLG E GA E+K+HPFF+ +N+
Sbjct: 214 DRRVLETEEVY--SAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFKR 271
Query: 939 VRC--MNPPELDAP 950
+ ++PP + P
Sbjct: 272 LEAGMLDPPFVPDP 285
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 139 bits (352), Expect = 9e-37
Identities = 74/293 (25%), Positives = 118/293 (40%), Gaps = 66/293 (22%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKG---------------VM--LN---- 709
+ + LG G GSV+L +G+ A+K+++ ++ L
Sbjct: 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNI 61
Query: 710 -------RNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC 762
R++ K + + +Y GG L LL + L E +R Y +++ L YLH
Sbjct: 62 VRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKF--GKLPEPVIRKYTRQILEGLAYLHS 119
Query: 763 QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 822
GI++RD+K N+L+ +G V L DF + KR +
Sbjct: 120 NGIVHRDIKGANILVDSDGVVKLADFGCA-----------------KRLGDIETGE---- 158
Query: 823 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 882
+ S GT ++APE+I G + A D W+LG + EM G P+ +
Sbjct: 159 ----GTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPW---SELGNPMA 211
Query: 883 ILHKDLKFPSSTP----TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
L+K S AK + + L RDPK R A+E+ +HPF
Sbjct: 212 ALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRP----TADELLQHPFL 260
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|237427 PRK13559, PRK13559, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 141 bits (358), Expect = 1e-36
Identities = 52/113 (46%), Positives = 72/113 (63%), Gaps = 3/113 (2%)
Query: 195 LSTFQQT---FVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVA 251
+QT ++D +PD PI+ A+ F +TGY ++EVVGRNCRFLQGA TDP VA
Sbjct: 46 EQAMEQTRMAMCITDPHQPDLPIVLANQAFLDLTGYAAEEVVGRNCRFLQGAATDPIAVA 105
Query: 252 KIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304
KIR + + LLNY+KDG PFWN L + P+ ++G++L F G Q +V+
Sbjct: 106 KIRAAIAAEREIVVELLNYRKDGEPFWNALHLGPVYGEDGRLLYFFGSQWDVT 158
|
Length = 361 |
| >gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Score = 140 bits (354), Expect = 5e-36
Identities = 99/315 (31%), Positives = 150/315 (47%), Gaps = 66/315 (20%)
Query: 656 IQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKT-- 713
I KI D ++ + + +K +G G G V LV + + +AMK + K M+ R+ +
Sbjct: 32 INKIRDL--RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF 89
Query: 714 -------------------------KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRF 748
++ ++ +Y PGG+L L+ + E RF
Sbjct: 90 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARF 146
Query: 749 YAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEK 808
Y AEVV+AL+ +H G I+RD+KP+N+LL +GH+ L DF +C+ K
Sbjct: 147 YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG-TCMKMNK----------- 194
Query: 809 KRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGILLYEM 864
E M ++ VGT +YI+PE++ G + DWW++G+ LYEM
Sbjct: 195 --------------EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 240
Query: 865 LYGYTPFRGKTRQKTFANIL-HKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGA 922
L G TPF + T++ I+ HK+ L FP S AK L+ L D + RLG + G
Sbjct: 241 LVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFL-TDREVRLGRN-GV 298
Query: 923 NEIKKHPFFKGVNWA 937
EIK+H FFK WA
Sbjct: 299 EEIKRHLFFKNDQWA 313
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371 |
| >gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Score = 139 bits (352), Expect = 1e-35
Identities = 98/326 (30%), Positives = 151/326 (46%), Gaps = 73/326 (22%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKT----------------- 713
F IK LG G G V L + +AMK + K +LNRN+
Sbjct: 3 FVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEW 62
Query: 714 ----------KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ 763
K ++ + DY PGG++ LL R +V E RFY AE+ +A+E +H
Sbjct: 63 VVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVHKM 120
Query: 764 GIIYRDLKPENVLLQGNGHVSLTDFDLSC------------------------------L 793
G I+RD+KP+N+L+ +GH+ LTDF L +
Sbjct: 121 GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDV 180
Query: 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVD 853
++C+ L T ++ + Q+ +A +S VGT YIAPE++ G+T D
Sbjct: 181 SNCRCGDRLKTLEQRATK----QHQRCLA------HSLVGTPNYIAPEVLLRKGYTQLCD 230
Query: 854 WWALGILLYEMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHRD 911
WW++G++L+EML G PF T +T +++ L P S A L+ +L
Sbjct: 231 WWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCC-S 289
Query: 912 PKSRLGSHEGANEIKKHPFFKGVNWA 937
+ RLG + GA++IK HPFF V+++
Sbjct: 290 AEERLGRN-GADDIKAHPFFSEVDFS 314
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381 |
| >gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 137 bits (347), Expect = 2e-35
Identities = 76/226 (33%), Positives = 110/226 (48%), Gaps = 35/226 (15%)
Query: 712 KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLK 771
K ++++ L+ ++ GGE F L R K D FYAA++V+ EYL I+YRDLK
Sbjct: 101 KDESYLYLVLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLK 158
Query: 772 PENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSF 831
PEN+LL +G + +TDF + + + + +
Sbjct: 159 PENLLLDKDGFIKMTDFGFAKVVDTR------------------------------TYTL 188
Query: 832 VGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFP 891
GT EYIAPEI+ GH A DWW LGI +YE+L G PF + IL + FP
Sbjct: 189 CGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFP 248
Query: 892 SSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNW 936
+ K LM +LL D R G+ +GA +K+HP+F ++W
Sbjct: 249 KFLDNN--CKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDW 292
|
Length = 340 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 133 bits (337), Expect = 1e-34
Identities = 94/296 (31%), Positives = 138/296 (46%), Gaps = 58/296 (19%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN------------------- 711
FR + LG G G V ++ +G+ +A K ++K + R
Sbjct: 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRF 61
Query: 712 --------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ 763
+TK +CL+ GG+L + +E FYAAE+ LE LH +
Sbjct: 62 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE 121
Query: 764 GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAE 823
I+YRDLKPEN+LL +GH+ ++D L+ + +P K R
Sbjct: 122 RIVYRDLKPENILLDDHGHIRISDLGLA--------VHVPEGQTIKGR------------ 161
Query: 824 PMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF--RGKTRQKTFA 881
VGT Y+APE++ +T + DWWALG LLYEM+ G +PF R K ++
Sbjct: 162 --------VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV 213
Query: 882 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNW 936
L K+++ S S A+ L LL +DPK RLG GA E+K+HP FK +N+
Sbjct: 214 ERLVKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINF 269
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 131 bits (332), Expect = 3e-34
Identities = 72/286 (25%), Positives = 112/286 (39%), Gaps = 58/286 (20%)
Query: 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKT---------------- 713
F ++ +G G G V+ +G+ A+K + + K
Sbjct: 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIV 60
Query: 714 --------KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGI 765
K + ++ ++C GG L LL + L E + + E++ LEYLH GI
Sbjct: 61 KYYGSYLKKDELWIVMEFCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNGI 119
Query: 766 IYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPM 825
I+RD+K N+LL +G V L DF LS QL
Sbjct: 120 IHRDIKAANILLTSDGEVKLIDFGLSA------QL----------------------SDT 151
Query: 826 RASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH 885
+A N+ VGT ++APE+I G + D W+LGI E+ G P+ K I
Sbjct: 152 KARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT 211
Query: 886 KDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930
+ S K + + L ++P+ R A ++ KHPF
Sbjct: 212 NGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRP----TAEQLLKHPF 253
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 130 bits (328), Expect = 2e-33
Identities = 88/315 (27%), Positives = 141/315 (44%), Gaps = 71/315 (22%)
Query: 677 LGSGDTGSVHLVELCGSGQYFAMKAMDK----------GVMLNRN--------------- 711
LG G G V ++ +G+ +A K ++K G M+ +
Sbjct: 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAY 60
Query: 712 --KTKTHVCLITDYCPGGEL----FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGI 765
+TKT +CL+ GG+L + + + P E FY A+++ LE+LH + I
Sbjct: 61 AFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPG--FPEPRACFYTAQIISGLEHLHQRRI 118
Query: 766 IYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPM 825
IYRDLKPENVLL +G+V ++D L+ V + +
Sbjct: 119 IYRDLKPENVLLDNDGNVRISDLGLA---------------------------VELKDGQ 151
Query: 826 RASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG---KTRQKTFAN 882
+ + GT ++APE++ G + +VD++ALG+ LYEM+ PFR K K
Sbjct: 152 SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ 211
Query: 883 -ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGA-NEIKKHPFFKGVNWALVR 940
IL+ + +P S +K LL +DP+ RLG +G + ++ HP F+ +NW +
Sbjct: 212 RILNDSVTYPDK--FSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWRQLE 269
Query: 941 CMNPPELDAPLFATD 955
P P F D
Sbjct: 270 AGMLP----PPFVPD 280
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Score = 126 bits (318), Expect = 3e-32
Identities = 91/313 (29%), Positives = 139/313 (44%), Gaps = 62/313 (19%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDK---------GVMLNRNK--------- 712
FR + LG G G V ++ +G+ +A K ++K + LN +
Sbjct: 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRF 61
Query: 713 ---------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ 763
TK +CL+ GG+L + E FYAAE+ LE L +
Sbjct: 62 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE 121
Query: 764 GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAE 823
I+YRDLKPEN+LL GH+ ++D L+ + +P + R
Sbjct: 122 RIVYRDLKPENILLDDRGHIRISDLGLA--------VQIPEGETVRGR------------ 161
Query: 824 PMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883
VGT Y+APE+I +T + DWW LG L+YEM+ G +PFR K +++
Sbjct: 162 --------VGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFR-KRKERVKREE 212
Query: 884 LHKDLKFPSSTPT---SLHAKQLMYRLLHRDPKSRLG-SHEGANEIKKHPFFKGVNWALV 939
+ + +K + S AK + LL ++PK RLG GA +K+HP FK +N+ +
Sbjct: 213 VDRRVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKRL 272
Query: 940 RC--MNPPELDAP 950
+ PP P
Sbjct: 273 EANMLEPPFCPDP 285
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 128 bits (321), Expect = 9e-32
Identities = 85/316 (26%), Positives = 135/316 (42%), Gaps = 69/316 (21%)
Query: 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKTKT-------------- 715
+R ++ LG G G V+L + A+K + K + + +
Sbjct: 1 SYRILRKLGEGSFGEVYLAR---DRKLVALKVLAKKLESKSKEVERFLREIQILASLNHP 57
Query: 716 --------------HVCLITDYCPGGELFLLLDRQPTK-VLKEDAVRFYAAEVVVALEYL 760
+ L+ +Y GG L LL + K L E F A+++ ALEYL
Sbjct: 58 PNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYL 117
Query: 761 HCQGIIYRDLKPENVLLQGNGH-VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPV 819
H +GII+RD+KPEN+LL +G V L DF L+ L +P
Sbjct: 118 HSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLP---------------------DPG 156
Query: 820 FMAEPMRASNSFVGTEEYIAPEIIAGAGH---TSAVDWWALGILLYEMLYGYTPFRGKTR 876
+ ++ VGT Y+APE++ G +S+ D W+LGI LYE+L G PF G+
Sbjct: 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKN 216
Query: 877 QKTFANILHKDLKFPSST-----------PTSLHAKQLMYRLLHRDPKSRLGSHEG-ANE 924
+ L L+ P+ + S A L+ +LL +DPK+RL S +++
Sbjct: 217 SSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHD 276
Query: 925 IKKHPFFKGVNWALVR 940
+ H K + + +
Sbjct: 277 LLAHLKLKESDLSDLL 292
|
Length = 384 |
| >gnl|CDD|237426 PRK13558, PRK13558, bacterio-opsin activator; Provisional | Back alignment and domain information |
|---|
Score = 131 bits (330), Expect = 2e-31
Identities = 52/123 (42%), Positives = 73/123 (59%), Gaps = 5/123 (4%)
Query: 486 VITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD 545
I D LPD P+I+ +D+F +T YS +E+LGRNCRFLQG +T+ V ++R AID +
Sbjct: 162 TIADATLPDEPLIYINDAFERITGYSPDEVLGRNCRFLQGEDTNEERVAELREAIDEERP 221
Query: 546 VTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEES 605
+V+L NY K G FWN + P+RD+ G V +++G Q D +E R A E
Sbjct: 222 TSVELRNYRKDGSTFWNQVDIAPIRDEDGTVTHYVGFQTDVTE-----RKEAELALQRER 276
Query: 606 EKL 608
KL
Sbjct: 277 RKL 279
|
Length = 665 |
| >gnl|CDD|237426 PRK13558, PRK13558, bacterio-opsin activator; Provisional | Back alignment and domain information |
|---|
Score = 129 bits (327), Expect = 5e-31
Identities = 48/106 (45%), Positives = 73/106 (68%)
Query: 203 VVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS 262
++DAT PD P++Y + F ++TGY+ EV+GRNCRFLQG T+ E VA++RE + +
Sbjct: 162 TIADATLPDEPLIYINDAFERITGYSPDEVLGRNCRFLQGEDTNEERVAELREAIDEERP 221
Query: 263 YCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTE 308
L NY+KDG+ FWN + IAPI+D++G V ++G Q +V++ E
Sbjct: 222 TSVELRNYRKDGSTFWNQVDIAPIRDEDGTVTHYVGFQTDVTERKE 267
|
Length = 665 |
| >gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 6e-31
Identities = 79/291 (27%), Positives = 132/291 (45%), Gaps = 60/291 (20%)
Query: 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN------------------------- 711
LG G G V V++ +G+ +A K +DK + ++
Sbjct: 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAY 60
Query: 712 --KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRD 769
++KTH+CL+ GG+L + + L+ + V Y+A++ + +LH I+YRD
Sbjct: 61 AFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRD 120
Query: 770 LKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASN 829
+KPENVLL G+ L+D L+ + L +R
Sbjct: 121 MKPENVLLDDQGNCRLSDLGLA--------VELKDGKTITQR------------------ 154
Query: 830 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK----TRQKTFANILH 885
GT Y+APEI+ ++ VDW+A+G +YEM+ G TPF+ +++ L
Sbjct: 155 --AGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLE 212
Query: 886 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936
++KF T +K + L + P+ RLGS E ++ +KH FFK +N+
Sbjct: 213 DEVKFEHQNFTE-ESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINF 262
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277 |
| >gnl|CDD|237425 PRK13557, PRK13557, histidine kinase; Provisional | Back alignment and domain information |
|---|
Score = 127 bits (320), Expect = 2e-30
Identities = 49/118 (41%), Positives = 79/118 (66%)
Query: 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDP 247
SDI A+ T + +V+D +PD PI++A+ F +MTGY ++E++G NCRFLQG TD
Sbjct: 29 SDIFFAAVETTRMPMIVTDPNQPDNPIVFANRAFLEMTGYAAEEIIGNNCRFLQGPETDR 88
Query: 248 EDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSK 305
VA++R+ + + +LNY+KDG+ FWN L ++P+ +D G ++ F G Q++VS+
Sbjct: 89 ATVAEVRDAIAERREIATEILNYRKDGSSFWNALFVSPVYNDAGDLVYFFGSQLDVSR 146
|
Length = 540 |
| >gnl|CDD|222120 pfam13426, PAS_9, PAS domain | Back alignment and domain information |
|---|
Score = 112 bits (283), Expect = 1e-29
Identities = 39/104 (37%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 485 FVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQT 544
++ DP D I++A+D+ L L Y+REE+LG++ R L GP D V ++R A+ N
Sbjct: 1 ILVLDP---DGRIVYANDAALRLLGYTREELLGKSIRDLFGPGDDEEAVARLREALRNGG 57
Query: 545 DVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSE 588
+V V+L K G+ F L P+RD+ GEV +G+ D +E
Sbjct: 58 EVEVELELRRKDGEPFPVLVSASPVRDEDGEVVGIVGILRDITE 101
|
Length = 101 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 2e-27
Identities = 81/291 (27%), Positives = 115/291 (39%), Gaps = 72/291 (24%)
Query: 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKTKTH-------------------- 716
+G G G V+ +G+ A+K + + N KT
Sbjct: 8 IGGGTFGKVYTAVNLDTGELMAVKEIR----IQDNDPKTIKEIADEMKVLELLKHPNLVK 63
Query: 717 ----------VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGII 766
V + +YC GG L LL+ ++L E +R Y +++ L YLH GI+
Sbjct: 64 YYGVEVHREKVYIFMEYCSGGTLEELLEH--GRILDEHVIRVYTLQLLEGLAYLHSHGIV 121
Query: 767 YRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMR 826
+RD+KP N+ L NG + L DF C +L TT M E +
Sbjct: 122 HRDIKPANIFLDHNGVIKLGDF------GCAVKLKNNTTT--------------MGEEV- 160
Query: 827 ASNSFVGTEEYIAPEIIAGA---GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883
S GT Y+APE+I G GH A D W+LG ++ EM G P+ + F +
Sbjct: 161 --QSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE--FQIM 216
Query: 884 LHKDLKFPSSTPTSLHAKQLMYRLLHR----DPKSRLGSHEGANEIKKHPF 930
H P SL L R DPK R A+E+ +HPF
Sbjct: 217 FHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRP----TASELLQHPF 263
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|222120 pfam13426, PAS_9, PAS domain | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 2e-26
Identities = 37/104 (35%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Query: 202 FVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ 261
+V D PD I+YA+ ++ GYT +E++G++ R L G G D E VA++RE L+NG
Sbjct: 1 ILVLD---PDGRIVYANDAALRLLGYTREELLGKSIRDLFGPGDDEEAVARLREALRNGG 57
Query: 262 SYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSK 305
L +KDG PF L++ +P++D++G+V+ +G+ ++++
Sbjct: 58 EVEVELELRRKDGEPFPVLVSASPVRDEDGEVVGIVGILRDITE 101
|
Length = 101 |
| >gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Score = 108 bits (273), Expect = 3e-26
Identities = 78/280 (27%), Positives = 112/280 (40%), Gaps = 73/280 (26%)
Query: 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKTKTHVCLITDYC 724
I ++F I+P VH +L F +K + T LI DY
Sbjct: 48 IIKAKNFNAIEP-------MVH--QLMKDNPNF-IK------LYYSVTTLKGHVLIMDYI 91
Query: 725 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL-QGNGHV 783
G+LF LL ++ L E V+ ++V AL LH II+ D+K ENVL + +
Sbjct: 92 KDGDLFDLLKKEGK--LSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRI 149
Query: 784 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII 843
L D+ L CK G + + GT +Y +PE I
Sbjct: 150 YLCDYGL-----CK--------------IIGTPS------------CYDGTLDYFSPEKI 178
Query: 844 AGAGHTSAVDWWALGILLYEMLYGYTPFRG-----------KTRQKTFANILHKDLKFPS 892
G + + DWWA+G+L YE+L G PF+ RQ K L F
Sbjct: 179 KGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-------QKKLPFIK 231
Query: 893 STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
+ S +A + +L + RL ++ NEI KHPF K
Sbjct: 232 N--VSKNANDFVQSMLKYNINYRLTNY---NEIIKHPFLK 266
|
Length = 267 |
| >gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 3e-25
Identities = 77/268 (28%), Positives = 114/268 (42%), Gaps = 60/268 (22%)
Query: 685 VHLVELCGSGQYFAMKAMDKGVMLNRNK-----------TKTH--------VCLITDYCP 725
V LV + Q F +K + K +R + H V L+ +
Sbjct: 9 VLLVMDTRTQQTFILKGLRKSSEYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAE 68
Query: 726 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSL 785
GG+L+ + + + E+ V+ +AAE+VVAL+ LH +GI+ RDL P N+LL GH+ L
Sbjct: 69 GGKLWSHISKFLN--IPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQL 126
Query: 786 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG 845
T F + + V E + Y APE+
Sbjct: 127 TYF-------------------------SRWSEV---EDSCDGEAV--ENMYCAPEVGGI 156
Query: 846 AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI-LHKDLKFPSSTPTSLHAKQLM 904
+ T A DWW+LG +L+E+L G T + I H L P S A+ L+
Sbjct: 157 SEETEACDWWSLGAILFELLTGKTLVECHP-----SGINTHTTLNIPEW--VSEEARSLL 209
Query: 905 YRLLHRDPKSRLGSHE-GANEIKKHPFF 931
+LL +P RLG+ G +IK HPFF
Sbjct: 210 QQLLQFNPTERLGAGVAGVEDIKSHPFF 237
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 3e-25
Identities = 69/276 (25%), Positives = 114/276 (41%), Gaps = 60/276 (21%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK-------------TKTHV 717
F+ +K LG G GSV+ V+ Q++A+K +D G M + + ++
Sbjct: 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNI 61
Query: 718 -------------CLITDYCPGGELFLLLDRQPT--KVLKEDAVRFYAAEVVVALEYLHC 762
C++ +Y P G+L + ++ K++ E + +++ L+ LH
Sbjct: 62 ISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE 121
Query: 763 QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 822
Q I++RDLK N+LL N V + D +S + KK K Q
Sbjct: 122 QKILHRDLKSANILLVANDLVKIGDLGISKVL-------------KKNMAKTQ------- 161
Query: 823 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 882
+GT Y+APE+ G ++ D W+LG LLYEM PF ++ Q
Sbjct: 162 ---------IGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYK 212
Query: 883 ILHKDLKFPSSTPT-SLHAKQLMYRLLHRDPKSRLG 917
+ K+P P S + + +L PK R
Sbjct: 213 VQRG--KYPPIPPIYSQDLQNFIRSMLQVKPKLRPN 246
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 105 bits (265), Expect = 4e-25
Identities = 71/220 (32%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG 779
I +YC GG LL L E + F EV++ LEYLH +G I+RD+K N+LL
Sbjct: 77 IMEYCGGGSCLDLLKPGK---LDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSE 133
Query: 780 NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIA 839
G V L DF +S QL T+ KR N+FVGT ++A
Sbjct: 134 EGDVKLADFGVS------GQL---TSTMSKR------------------NTFVGTPFWMA 166
Query: 840 PEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLH 899
PE+I +G+ D W+LGI E+ G P + I P + P SL
Sbjct: 167 PEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLI-------PKNNPPSLE 219
Query: 900 A-------KQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
K + L++DPK R A E+ KH F K
Sbjct: 220 GNKFSKPFKDFVSLCLNKDPKERP----SAKELLKHKFIK 255
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 3e-23
Identities = 79/304 (25%), Positives = 130/304 (42%), Gaps = 62/304 (20%)
Query: 655 AIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKG--------- 705
A++ I+ G+ L ++ ++ +G G +G V+ +G+ A+K M
Sbjct: 7 ALKDIVSEGDPREL--YKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIIN 64
Query: 706 --VMLNRNKTKTHVCLITDYCPGGELFL------------LLDRQPTKVLKEDAVRFYAA 751
+++ K V Y G EL++ ++ + + + E + +
Sbjct: 65 EILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVR-MNEPQIAYVCR 123
Query: 752 EVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRR 811
EV+ LEYLH Q +I+RD+K +N+LL +G V L DF + QL T EK +R
Sbjct: 124 EVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAA------QL----TKEKSKR 173
Query: 812 HKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 871
NS VGT ++APE+I + VD W+LGI+ EM G P+
Sbjct: 174 -----------------NSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPY 216
Query: 872 RGKTRQKTFANILHK---DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928
+ + I K LK P K + + L +DP+ R + E+ +H
Sbjct: 217 LREPPLRALFLITTKGIPPLKNPEKWSPEF--KDFLNKCLVKDPEKRPSAE----ELLQH 270
Query: 929 PFFK 932
PF K
Sbjct: 271 PFLK 274
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 3e-23
Identities = 63/222 (28%), Positives = 90/222 (40%), Gaps = 39/222 (17%)
Query: 719 LITDYCPGGELFLLLDRQ-PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL 777
L+ Y GG L ++ P L E + EV+ LEYLH G I+RD+K N+LL
Sbjct: 76 LVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILL 135
Query: 778 QGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEY 837
+G V + DF +S L +K R +FVGT +
Sbjct: 136 GEDGSVKIADFGVSAS------LADGGDRTRKVRK-----------------TFVGTPCW 172
Query: 838 IAPEIIA-GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPT 896
+APE++ G+ D W+ GI E+ G P+ K L D P S T
Sbjct: 173 MAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQND---PPSLET 229
Query: 897 -------SLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
S ++++ L +DP R A E+ KH FF
Sbjct: 230 GADYKKYSKSFRKMISLCLQKDPSKR----PTAEELLKHKFF 267
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 99.2 bits (248), Expect = 5e-23
Identities = 72/298 (24%), Positives = 122/298 (40%), Gaps = 72/298 (24%)
Query: 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKTKTH------------- 716
+K LG G +G V+ V +G+ +A+K + ++ ++
Sbjct: 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKK----IHVDGDEEFRKQLLRELKTLRSCE 57
Query: 717 ----------------VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYL 760
+ ++ +Y GG L LL + + E + + A +++ L+YL
Sbjct: 58 SPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGK--IPEPVLAYIARQILKGLDYL 115
Query: 761 HCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPV 819
H + II+RD+KP N+L+ G V + DF +S + L T ++
Sbjct: 116 HTKRHIIHRDIKPSNLLINSKGEVKIADFGISKV--------LENTLDQC---------- 157
Query: 820 FMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879
N+FVGT Y++PE I G ++ A D W+LG+ L E G PF Q +
Sbjct: 158 ---------NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFL-PPGQPS 207
Query: 880 FANILHKDLKFPS----STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933
F ++ P + S + + L +DPK R A E+ +HPF K
Sbjct: 208 FFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRP----SAAELLQHPFIKK 261
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 99.2 bits (248), Expect = 5e-23
Identities = 62/293 (21%), Positives = 118/293 (40%), Gaps = 69/293 (23%)
Query: 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR----------------------- 710
++ +G G G+V V G+ K +D G M +
Sbjct: 5 LETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRY 64
Query: 711 -----NKTKTHVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQ 763
+++ + ++ +YC GG+L L+ + + K ++E+ + ++++AL H +
Sbjct: 65 YDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNR 124
Query: 764 G-----IIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNP 818
+++RDLKP N+ L N +V L DF L+ +L +
Sbjct: 125 SDPGNTVLHRDLKPANIFLDANNNVKLGDFGLA--------KILGHDS------------ 164
Query: 819 VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878
A ++VGT Y++PE + + D W+LG L+YE+ PF + + +
Sbjct: 165 -SFA------KTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQ 217
Query: 879 TFANILHKDLKFPSSTPT-SLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930
+ I K+ KF S +++ +L+ DP R E+ + P
Sbjct: 218 LASKI--KEGKFRRIPYRYSSELNEVIKSMLNVDPDKR----PSTEELLQLPL 264
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 98.9 bits (247), Expect = 8e-23
Identities = 69/298 (23%), Positives = 111/298 (37%), Gaps = 65/298 (21%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMK--------------AMDKGVMLNRNK-- 712
+ LG+G++G V V +G+ A+K + ++ N
Sbjct: 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPY 60
Query: 713 ---------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ 763
+ + +Y GG L +L + E + A V+ L YLH +
Sbjct: 61 IVGFYGAFYNNGDISICMEYMDGGSLDKILKEV-QGRIPERILGKIAVAVLKGLTYLHEK 119
Query: 764 -GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 822
II+RD+KP N+L+ G + L DF +S QL N
Sbjct: 120 HKIIHRDVKPSNILVNSRGQIKLCDFGVS------GQL----VNSL-------------- 155
Query: 823 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ-KTFA 881
+ +FVGT Y+APE I G ++ D W+LG+ L E+ G P+ +
Sbjct: 156 -----AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIF 210
Query: 882 NILHKDLKFPS----STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935
+L + P S S + + L +DP+ R E+ +HPF K
Sbjct: 211 ELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRER----PSYKELLEHPFIKKYE 264
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 98.3 bits (245), Expect = 1e-22
Identities = 76/295 (25%), Positives = 121/295 (41%), Gaps = 74/295 (25%)
Query: 670 HFRPIKPLGSGDTGS-----------------VHLVELCGSGQYFAMKAMDKGVMLNRNK 712
H+ PI+ LG G G V+L L + A+ + +L
Sbjct: 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPN 60
Query: 713 T--------KTHVCLIT-DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ 763
+ LI +Y GG L+ + RQ ++ +E+ V +Y ++V A+ Y+H
Sbjct: 61 IIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA 120
Query: 764 GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAE 823
GI++RD+K N+ L G + L DF +S K + MAE
Sbjct: 121 GILHRDIKTLNIFLTKAGLIKLGDFGIS---------------------KILGSEYSMAE 159
Query: 824 PMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA-- 881
+ VGT Y++PE+ G + D WALG +LYE+L T ++TF
Sbjct: 160 ------TVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELL---------TLKRTFDAT 204
Query: 882 NILHKDLKF------PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930
N L+ +K P + S L++ LL +DP+ R A+E+ P
Sbjct: 205 NPLNLVVKIVQGNYTPVVSVYSSELISLVHSLLQQDPEKR----PTADEVLDQPL 255
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 97.1 bits (242), Expect = 5e-22
Identities = 81/303 (26%), Positives = 127/303 (41%), Gaps = 61/303 (20%)
Query: 655 AIQKILDSGEQ-INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKT 713
A+Q ++D G+ L +F I G G TG V + +G+ A+K MD R
Sbjct: 7 ALQLVVDPGDPRSYLDNFVKI---GEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELL 63
Query: 714 KTHVCLITDY------------CPGGELFLLL---------DRQPTKVLKEDAVRFYAAE 752
V ++ DY G EL++++ D + E+ +
Sbjct: 64 FNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLA 123
Query: 753 VVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRH 812
V+ AL +LH QG+I+RD+K +++LL +G V L+DF S E RR
Sbjct: 124 VLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVS----------KEVPRR- 172
Query: 813 KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 872
S VGT ++APE+I+ + + VD W+LGI++ EM+ G P+
Sbjct: 173 ----------------KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYF 216
Query: 873 GKTRQKTFANILHKDLKFPSSTPT---SLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 929
+ + I +D P S + + R+L RDP R A E+ HP
Sbjct: 217 NEPPLQAMKRI--RDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQR----ATAAELLNHP 270
Query: 930 FFK 932
F
Sbjct: 271 FLA 273
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 6e-22
Identities = 51/126 (40%), Positives = 74/126 (58%), Gaps = 5/126 (3%)
Query: 832 VGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFP 891
+GT +Y+APE++ G H AVDWWALG+ L+E L G PF +T Q+ F NIL++D+ +P
Sbjct: 541 LGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWP 600
Query: 892 SSTPT-SLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAP 950
S++A+ + LL DP R G E+K+HP F GV+W ++ P + P
Sbjct: 601 EGEEKLSVNAQNAIEILLTMDPTKR----AGLKELKQHPLFHGVDWENLQNQTMPFIPQP 656
Query: 951 LFATDT 956
TDT
Sbjct: 657 DDETDT 662
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 95.6 bits (238), Expect = 9e-22
Identities = 75/288 (26%), Positives = 120/288 (41%), Gaps = 72/288 (25%)
Query: 677 LGSGDTGSVHLVELCGSGQYFAMK---AMDKGV--------------MLNR--------- 710
LGSG GSV+ G +FA+K D G +L++
Sbjct: 8 LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQY 67
Query: 711 ---NKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIY 767
+ + ++ + + PGG L LL + E +R Y ++++ LEYLH + ++
Sbjct: 68 LGTEREEDNLYIFLELVPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYLHDRNTVH 125
Query: 768 RDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRA 827
RD+K N+L+ NG V L DF ++ K+
Sbjct: 126 RDIKGANILVDTNGVVKLADFGMA----------------KQ------------VVEFSF 157
Query: 828 SNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH- 885
+ SF G+ ++APE+IA G + A D W+LG + EM G P+ ++ + A +
Sbjct: 158 AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPW---SQLEGVAAVFKI 214
Query: 886 ---KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930
K+L P S AK + + L RDP R A E+ +HPF
Sbjct: 215 GRSKELP-PIPDHLSDEAKDFILKCLQRDPSLRP----TAAELLEHPF 257
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 95.4 bits (238), Expect = 9e-22
Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 29/160 (18%)
Query: 712 KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLK 771
+T + +I +Y G L ++ + E V Y +V+ L YLH QG+I+RD+K
Sbjct: 69 ETSDSLYIILEYAENGSLRQII--KKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIK 126
Query: 772 PENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSF 831
N+L +G V L DF ++ + + + S
Sbjct: 127 AANILTTKDGVVKLADFGVA---------------------------TKLNDVSKDDASV 159
Query: 832 VGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 871
VGT ++APE+I +G ++A D W+LG + E+L G P+
Sbjct: 160 VGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPY 199
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 95.2 bits (237), Expect = 2e-21
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 37/210 (17%)
Query: 715 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 774
+ +I +Y GG + L+ P + E + EV+VAL+Y+H G+I+RD+K N
Sbjct: 75 PRLWIIMEYAEGGSVRTLMKAGP---IAEKYISVIIREVLVALKYIHKVGVIHRDIKAAN 131
Query: 775 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGT 834
+L+ G+V L DF ++ L N KR ++FVGT
Sbjct: 132 ILVTNTGNVKLCDFGVAALL---------NQNSSKR------------------STFVGT 164
Query: 835 EEYIAPEIIA-GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSS 893
++APE+I G + + D W+LGI +YEM G P+ + I P
Sbjct: 165 PYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSK---PPR 221
Query: 894 TPTSLHAKQL---MYRLLHRDPKSRLGSHE 920
+ ++K L + L +PK RL + E
Sbjct: 222 LEDNGYSKLLREFVAACLDEEPKERLSAEE 251
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 92.9 bits (232), Expect = 1e-20
Identities = 64/251 (25%), Positives = 101/251 (40%), Gaps = 69/251 (27%)
Query: 713 TKTHVCLITDYCPGGE--LFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 770
T+ + L+ +YC + L LD++P L + ++ +++ L Y H I++RDL
Sbjct: 69 TERKLYLVFEYC---DMDLKKYLDKRPGP-LSPNLIKSIMYQLLRGLAYCHSHRILHRDL 124
Query: 771 KPENVLLQGNGHVSLTDFDLS-CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASN 829
KP+N+L+ +G + L DF L+ P+R
Sbjct: 125 KPQNILINRDGVLKLADFGLARAFGI----------------------------PLRTYT 156
Query: 830 SFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQ----KTFANIL 884
V T Y APEI+ G+ H ++AVD W++G + EM+ G F G + K F IL
Sbjct: 157 HEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIF-QIL 215
Query: 885 ---------------HKDLKFPSSTPTSLH---------AKQLMYRLLHRDPKSRLGSHE 920
FP P L L+ ++L +P R+
Sbjct: 216 GTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRI---- 271
Query: 921 GANEIKKHPFF 931
A E KHP+F
Sbjct: 272 SAKEALKHPYF 282
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 91.2 bits (226), Expect = 6e-20
Identities = 82/313 (26%), Positives = 136/313 (43%), Gaps = 59/313 (18%)
Query: 655 AIQKILDSGE-QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKT 713
A++ ++D G+ + L+++ I G G TG V + SG+ A+K MD R
Sbjct: 9 ALRMVVDQGDPRSLLENYIKI---GEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELL 65
Query: 714 KTHVCLITDY------------CPGGELFLLL---------DRQPTKVLKEDAVRFYAAE 752
V ++ DY G EL++L+ D L E+ +
Sbjct: 66 FNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQTRLNEEQIATVCES 125
Query: 753 VVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRH 812
V+ AL YLH QG+I+RD+K +++LL +G V L+DF S + KR+
Sbjct: 126 VLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQIS---------KDVPKRK- 175
Query: 813 KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 872
S VGT ++APE+I+ + + VD W+LGI++ EM+ G P+
Sbjct: 176 -----------------SLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYF 218
Query: 873 GKTRQKTFANILHK-DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
+ + + K ++ S + + R+L R+P+ R A E+ HPF
Sbjct: 219 SDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQER----ATAQELLDHPFL 274
Query: 932 KGVNWALVRCMNP 944
+ L C+ P
Sbjct: 275 --LQTGLPECLVP 285
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 90.5 bits (224), Expect = 1e-19
Identities = 88/302 (29%), Positives = 129/302 (42%), Gaps = 61/302 (20%)
Query: 655 AIQKILDSGE-QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKT 713
A+Q ++D G+ + L +F I G G TG V + + SG+ A+K MD R
Sbjct: 8 ALQMVVDPGDPRTYLDNFIKI---GEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELL 64
Query: 714 KTHVCLITDY------------CPGGELFLLL---------DRQPTKVLKEDAVRFYAAE 752
V ++ DY G EL++++ D + E+ +
Sbjct: 65 FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA 124
Query: 753 VVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRH 812
V+ AL LH QG+I+RD+K +++LL +G V L+DF S E RR
Sbjct: 125 VLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS----------KEVPRR- 173
Query: 813 KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 872
S VGT ++APE+I+ + VD W+LGI++ EM+ G P+
Sbjct: 174 ----------------KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF 217
Query: 873 GKTRQKTFANI---LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 929
+ K I L LK SL K + RLL RDP R A E+ KHP
Sbjct: 218 NEPPLKAMKMIRDNLPPKLKNLHKVSPSL--KGFLDRLLVRDPAQR----ATAAELLKHP 271
Query: 930 FF 931
F
Sbjct: 272 FL 273
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 89.1 bits (222), Expect = 1e-19
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 34/203 (16%)
Query: 717 VCLITDYCPGGEL--FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 774
+ ++ +Y PGG+L +L +P ++ D + F A ++ +EYL + I+RDL N
Sbjct: 76 LMIVMEYMPGGDLLDYLR-KNRPKELSLSDLLSF-ALQIARGMEYLESKNFIHRDLAARN 133
Query: 775 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGT 834
L+ N V ++DF LS ++ + KG + P+
Sbjct: 134 CLVGENLVVKISDFGLSRD----------LYDDDYYKVKGGKLPIR-------------- 169
Query: 835 EEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILHKD-LKFPS 892
++APE + TS D W+ G+LL+E+ G P+ G + + + L P
Sbjct: 170 --WMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRLPKPP 227
Query: 893 STPTSLHAKQLMYRLLHRDPKSR 915
+ P L+ +LM + DP+ R
Sbjct: 228 NCPPELY--KLMLQCWAEDPEDR 248
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 87.2 bits (217), Expect = 7e-19
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 35/203 (17%)
Query: 717 VCLITDYCPGGEL--FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 774
+ ++ +Y GG+L +L R+ L + +A ++ +EYL + I+RDL N
Sbjct: 76 LYIVMEYMEGGDLLSYL---RKNRPKLSLSDLLSFALQIARGMEYLESKNFIHRDLAARN 132
Query: 775 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGT 834
L+ N V ++DF LS ++ R +G + P+
Sbjct: 133 CLVGENLVVKISDFGLSRD----------LYDDDYYRKRGGKLPIR-------------- 168
Query: 835 EEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILHKD-LKFPS 892
++APE + TS D W+ G+LL+E+ G P+ G + ++ + + L P
Sbjct: 169 --WMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNGYRLPQPP 226
Query: 893 STPTSLHAKQLMYRLLHRDPKSR 915
+ P L+ LM + DP+ R
Sbjct: 227 NCPPELY--DLMLQCWAEDPEDR 247
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 87.0 bits (216), Expect = 1e-18
Identities = 65/313 (20%), Positives = 112/313 (35%), Gaps = 88/313 (28%)
Query: 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKG--------------VMLNRNK------- 712
+ +G G G V+ +G+ A+K + +L
Sbjct: 4 LGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKL 63
Query: 713 -----TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIY 767
K + L+ ++ L+ DRQ + L E ++ Y +++ L + H GI++
Sbjct: 64 LDVFRHKGDLYLVFEFMDTDLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCHSHGILH 121
Query: 768 RDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRA 827
RDLKPEN+L+ G + L DF L+ +
Sbjct: 122 RDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTH------------------------ 157
Query: 828 SNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTR---------- 876
+V T Y APE++ G G+++ VD W++G + E+L F GK+
Sbjct: 158 ---YVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRT 214
Query: 877 ---------QKTFANILHKDLKFPSSTPTSLH---------AKQLMYRLLHRDPKSRLGS 918
K + + FP L A L+ ++LH DP R+ +
Sbjct: 215 LGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITA 274
Query: 919 HEGANEIKKHPFF 931
+ HP+F
Sbjct: 275 EQAL----AHPYF 283
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 86.8 bits (216), Expect = 1e-18
Identities = 67/321 (20%), Positives = 117/321 (36%), Gaps = 94/321 (29%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMD--------------------------- 703
+ I +G G G V+ +G+ A+K +
Sbjct: 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNI 60
Query: 704 ---KGVMLNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYL 760
K ++ +K K + ++ +Y +L LLD K E ++ Y +++ L+YL
Sbjct: 61 VRLKEIV--TSKGKGSIYMVFEYMDH-DLTGLLDSPEVK-FTESQIKCYMKQLLEGLQYL 116
Query: 761 HCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVF 820
H GI++RD+K N+L+ +G + L DF L+ R + + + +
Sbjct: 117 HSNGILHRDIKGSNILINNDGVLKLADFGLA------------------RPYTKRNSADY 158
Query: 821 MAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879
+ V T Y PE++ GA VD W++G +L E+ G F+G T +
Sbjct: 159 --------TNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQ 210
Query: 880 FANILH-------------------KDLKFPSSTPTSL----------HAKQLMYRLLHR 910
I ++LK L A L+ +LL
Sbjct: 211 LEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTL 270
Query: 911 DPKSRLGSHEGANEIKKHPFF 931
DPK R+ + + H +F
Sbjct: 271 DPKKRISADQALQ----HEYF 287
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 90.3 bits (224), Expect = 2e-18
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 29/154 (18%)
Query: 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN---------------- 711
++ F +KP+ G G V+L + + +A+K + K M+N+N
Sbjct: 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSK 62
Query: 712 -----------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYL 760
++ +V L+ +Y GG++ LL E+ Y +EV +AL+YL
Sbjct: 63 SPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLL--HIYGYFDEEMAVKYISEVALALDYL 120
Query: 761 HCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 794
H GII+RDLKP+N+L+ GH+ LTDF LS +T
Sbjct: 121 HRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVT 154
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 86.5 bits (215), Expect = 2e-18
Identities = 56/256 (21%), Positives = 98/256 (38%), Gaps = 74/256 (28%)
Query: 709 NRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYR 768
R + + L+ ++ +L L + P L + ++ +++ +++LH I++R
Sbjct: 73 PRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHR 131
Query: 769 DLKPENVLLQGNGHVSLTDFDL-------SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFM 821
DLKP+N+L+ +G V + DF L LTS
Sbjct: 132 DLKPQNILVTSDGQVKIADFGLARIYSFEMALTSV------------------------- 166
Query: 822 AEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP-FRGKTR---- 876
V T Y APE++ + + + VD W++G + E+ + P FRG +
Sbjct: 167 ----------VVTLWYRAPEVLLQSSYATPVDMWSVGCIFAEL-FRRRPLFRGTSEADQL 215
Query: 877 QKTF------------ANILHKDLKFPSSTPTSL---------HAKQLMYRLLHRDPKSR 915
K F N+ FPS TP S L+ ++L +P R
Sbjct: 216 DKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKR 275
Query: 916 LGSHEGANEIKKHPFF 931
+ + E HP+F
Sbjct: 276 ISAFEALQ----HPYF 287
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 85.7 bits (212), Expect = 2e-18
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 28/223 (12%)
Query: 708 LNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIY 767
L + H+ + +Y PGG + LL+ +E VR + +++ L YLH +GII+
Sbjct: 72 LGSSLDADHLNIFLEYVPGGSVAALLNNYGA--FEETLVRNFVRQILKGLNYLHNRGIIH 129
Query: 768 RDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRA 827
RD+K N+L+ G + ++DF +S +L + + K +
Sbjct: 130 RDIKGANILVDNKGGIKISDFGIS------KKLEANSLSTKTNGAR-------------- 169
Query: 828 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 887
S G+ ++APE++ +T D W+LG L+ EML G PF T+ + I
Sbjct: 170 -PSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENA 228
Query: 888 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930
S +S A + + D R A E+ KHPF
Sbjct: 229 SPEIPSNISS-EAIDFLEKTFEIDHNKR----PTAAELLKHPF 266
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Score = 85.0 bits (210), Expect = 4e-18
Identities = 62/268 (23%), Positives = 115/268 (42%), Gaps = 55/268 (20%)
Query: 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAM-------------DKGVMLNRNK-------- 712
++ +G G G LV+ S Q +AMK + + V+L + K
Sbjct: 5 LRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFK 64
Query: 713 ----TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYR 768
H+ ++ +YC GG+L + Q K+ ED + + ++ + ++++H + +++R
Sbjct: 65 ESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHR 124
Query: 769 DLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRAS 828
D+K +N+ L NG V L DF + L + P +
Sbjct: 125 DIKSKNIFLTQNGKVKLGDFGSARL---------------------------LTSPGAYA 157
Query: 829 NSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDL 888
++VGT Y+ PEI + + D W+LG +LYE+ PF+ + + +
Sbjct: 158 CTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSY 217
Query: 889 K-FPSSTPTSLHAKQLMYRLLHRDPKSR 915
K PS L + L+ ++ R+P+SR
Sbjct: 218 KPLPSHYSYELRS--LIKQMFKRNPRSR 243
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 84.5 bits (209), Expect = 6e-18
Identities = 66/266 (24%), Positives = 107/266 (40%), Gaps = 56/266 (21%)
Query: 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKT----------------------- 713
+G G G V V + +AMK +D M R +
Sbjct: 8 IGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYES 67
Query: 714 ---KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAV-RFYAAEVVVALEYLHCQGIIYRD 769
K + ++ +Y G+L LL Q + L ED V RF+ ++++ L +LH + I++RD
Sbjct: 68 FLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFF-IQILLGLAHLHSKKILHRD 126
Query: 770 LKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASN 829
+K N+ L +V + D ++ +LL TN +N
Sbjct: 127 IKSLNLFLDAYDNVKIGDLGVA-------KLLSDNTN--------------------FAN 159
Query: 830 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 889
+ VGT Y++PE+ + D WALG++LYE G PF + I+
Sbjct: 160 TIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFP 219
Query: 890 FPSSTPTSLHAKQLMYRLLHRDPKSR 915
P S S QL+ + L +D + R
Sbjct: 220 -PVSQMYSQQLAQLIDQCLTKDYRQR 244
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 84.1 bits (208), Expect = 7e-18
Identities = 63/244 (25%), Positives = 104/244 (42%), Gaps = 61/244 (25%)
Query: 695 QYFAMKAMDKGVMLNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVV 754
+Y+ DK +M+ + +Y PGG L + ++ +L ED + + +++
Sbjct: 63 EYYENFLEDKALMI-----------VMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQIL 111
Query: 755 VALEYLHCQGIIYRDLKPENVLLQGNGH---VSLTDFDLSCLTSCKPQLLLPTTNEKKRR 811
+AL ++H + I++RDLK +N+LL + H V + DF +S + S K
Sbjct: 112 LALHHVHTKLILHRDLKTQNILL--DKHKMVVKIGDFGISKILSSK-------------- 155
Query: 812 HKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 871
+ + VGT YI+PE+ G + D WALG +LYE+ F
Sbjct: 156 --------------SKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAF 201
Query: 872 RGKTRQKTFANILHKDLKFPSST--PTSLH----AKQLMYRLLHRDPKSRLGSHEGANEI 925
AN+ LK S T P S +QL+ +L+ DP R ++I
Sbjct: 202 EA-------ANLPALVLKIMSGTFAPISDRYSPDLRQLILSMLNLDPSKR----PQLSQI 250
Query: 926 KKHP 929
P
Sbjct: 251 MAQP 254
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 84.4 bits (209), Expect = 8e-18
Identities = 57/233 (24%), Positives = 93/233 (39%), Gaps = 66/233 (28%)
Query: 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ 778
++ ++C GG L ++ + + L E +R+ +++ AL +LH +I+RDLK N+LL
Sbjct: 79 ILIEFCDGGALDSIML-ELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLT 137
Query: 779 GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYI 838
+G V L DF +S + ++R +F+GT ++
Sbjct: 138 LDGDVKLADFGVSAK----------NKSTLQKRD-----------------TFIGTPYWM 170
Query: 839 APEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD------ 887
APE++A + D W+LGI L E+ P H +
Sbjct: 171 APEVVACETFKDNPYDYKADIWSLGITLIELAQMEPP--------------HHELNPMRV 216
Query: 888 -LKFPSSTPTSLHA--------KQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
LK S P +L + L +DP R A E+ KHPF
Sbjct: 217 LLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRP----TAAELLKHPFV 265
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 83.5 bits (207), Expect = 1e-17
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 28/161 (17%)
Query: 713 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKP 772
T + ++ +YC G + ++ + K L E+ + + + LEYLH I+RD+K
Sbjct: 69 KNTDLWIVMEYCGAGSVSDIM-KITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKA 127
Query: 773 ENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFV 832
N+LL G L DF +S GQ + M N+ +
Sbjct: 128 GNILLNEEGQAKLADFGVS----------------------GQLT-----DTMAKRNTVI 160
Query: 833 GTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 873
GT ++APE+I G+ + D W+LGI EM G P+
Sbjct: 161 GTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSD 201
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Score = 82.7 bits (204), Expect = 2e-17
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 41/218 (18%)
Query: 718 CLITDYCPGGELFLLLD--RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 775
C+IT+YC G +L L+ + K L E+ V + ++++ + Y+H + I++RDLK +N+
Sbjct: 78 CIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNI 137
Query: 776 LLQGNGHVSLTDFDLSCLT--SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVG 833
L+ N + + DF +S L SC L TT F G
Sbjct: 138 FLKNN-LLKIGDFGVSRLLMGSCD----LATT-------------------------FTG 167
Query: 834 TEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDL-KFPS 892
T Y++PE + G+ S D W+LG +LYEM F G+ I+ P
Sbjct: 168 TPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPE 227
Query: 893 STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930
+ L++ +M +L++DP R A EI ++PF
Sbjct: 228 TYSRQLNS--IMQSMLNKDPSLRP----SAAEILRNPF 259
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 82.2 bits (204), Expect = 3e-17
Identities = 51/203 (25%), Positives = 93/203 (45%), Gaps = 34/203 (16%)
Query: 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 776
+ ++T+Y PGG+L L + K+ +D ++ A ++ +EYL + ++RDL N L
Sbjct: 76 LYIVTEYMPGGDLLDFLRKHGEKLTLKDLLQM-ALQIAKGMEYLESKNFVHRDLAARNCL 134
Query: 777 LQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEE 836
+ N V ++DF LS + + +KR + P+
Sbjct: 135 VTENLVVKISDFGLS-------RDIYEDDYYRKRGGG--KLPIK---------------- 169
Query: 837 YIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILHKD---LKFPS 892
++APE + TS D W+ G+LL+E+ G P+ G + ++ + +D L P
Sbjct: 170 WMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLELL--EDGYRLPRPE 227
Query: 893 STPTSLHAKQLMYRLLHRDPKSR 915
+ P L+ +LM + DP+ R
Sbjct: 228 NCPDELY--ELMLQCWAYDPEDR 248
|
Length = 258 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 82.4 bits (204), Expect = 4e-17
Identities = 65/244 (26%), Positives = 97/244 (39%), Gaps = 63/244 (25%)
Query: 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ 778
L+ +Y L LL+ P L DAVR Y +++ A+ Y H II+RD+KPEN+L+
Sbjct: 77 LVFEYVER-TLLELLEASPGG-LPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVS 134
Query: 779 GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYI 838
+G + L DF + +P +V T Y
Sbjct: 135 ESGVLKLCDFGFARALRARPA--------------------------SPLTDYVATRWYR 168
Query: 839 APEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKT------------------RQKT 879
APE++ G + VD WA+G ++ E+L G F G + Q+
Sbjct: 169 APELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQEL 228
Query: 880 F-ANILHKDLKFPS-STPTSLHAK----------QLMYRLLHRDPKSRLGSHEGANEIKK 927
F +N + FP S P SL + + L DPK RL E+ +
Sbjct: 229 FSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCD----ELLQ 284
Query: 928 HPFF 931
HP+F
Sbjct: 285 HPYF 288
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 82.3 bits (203), Expect = 6e-17
Identities = 72/284 (25%), Positives = 123/284 (43%), Gaps = 53/284 (18%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMD------KGVMLNR------NKTKTHVC 718
+ + +G G +G+V+ +GQ A+K M+ K +++N NK V
Sbjct: 21 YTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVN 80
Query: 719 LITDYCPGGELFLLLDRQP----TKV-----LKEDAVRFYAAEVVVALEYLHCQGIIYRD 769
+ Y G EL+++++ T V + E + E + ALE+LH +I+RD
Sbjct: 81 YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRD 140
Query: 770 LKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASN 829
+K +N+LL +G V LTDF C T E+ +R +
Sbjct: 141 IKSDNILLGMDGSVKLTDFGF-CAQ---------ITPEQSKR-----------------S 173
Query: 830 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI-LHKDL 888
+ VGT ++APE++ + VD W+LGI+ EM+ G P+ + + I +
Sbjct: 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP 233
Query: 889 KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
+ + S + + R L D + R A E+ +HPF K
Sbjct: 234 ELQNPEKLSAIFRDFLNRCLEMDVEKRG----SAKELLQHPFLK 273
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 81.4 bits (202), Expect = 7e-17
Identities = 49/213 (23%), Positives = 91/213 (42%), Gaps = 38/213 (17%)
Query: 713 TKTHVCLITDYCPGGEL--FLLLDRQPTKVLKEDAVRF-----YAAEVVVALEYLHCQGI 765
+ + L+ +Y GG+L +L R ++ + +A ++ +EYL +
Sbjct: 67 EEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKF 126
Query: 766 IYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPM 825
++RDL N L+ + V ++DF LS + + +++ G+ P+
Sbjct: 127 VHRDLAARNCLVGEDLVVKISDFGLS--------RDVYDDDYYRKKTGGK-------LPI 171
Query: 826 RASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANIL 884
R ++APE + TS D W+ G+LL+E+ G TP+ G + ++ +
Sbjct: 172 R----------WMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYL- 220
Query: 885 HKD--LKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
K L P P L+ +LM DP+ R
Sbjct: 221 RKGYRLPKPEYCPDELY--ELMLSCWQLDPEDR 251
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 80.8 bits (200), Expect = 1e-16
Identities = 62/228 (27%), Positives = 91/228 (39%), Gaps = 63/228 (27%)
Query: 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMK--AMDKG----------VMLNRNK--- 712
+ + I+ +GSG G V+ +G+ A+K ++ G ML +
Sbjct: 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPN 61
Query: 713 -----------TKTHVCLITDYCPGGELFLLLD--RQPTKVLKEDAVRFYAAEVVVALEY 759
K + + +YC GG L + R P L E + + E + L Y
Sbjct: 62 IVAYFGSYLRRDKLWIVM--EYCGGGSLQDIYQVTRGP---LSELQIAYVCRETLKGLAY 116
Query: 760 LHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPV 819
LH G I+RD+K N+LL +G V L DF +S QL T KR
Sbjct: 117 LHETGKIHRDIKGANILLTEDGDVKLADFGVSA------QL---TATIAKR--------- 158
Query: 820 FMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEM 864
SF+GT ++APE+ A G+ D WALGI E+
Sbjct: 159 ---------KSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIEL 197
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 81.2 bits (201), Expect = 1e-16
Identities = 64/249 (25%), Positives = 98/249 (39%), Gaps = 67/249 (26%)
Query: 715 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 774
+ L+ +Y P +L D + + L E V+ Y ++ + Y+H GI++RDLKP N
Sbjct: 72 SGFVLVMEYMPSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPAN 129
Query: 775 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGT 834
+L+ +G + + DF L+ L S E R + V T
Sbjct: 130 LLISADGVLKIADFGLARLFS--------------------------EEEPRLYSHQVAT 163
Query: 835 EEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH-------- 885
Y APE++ GA VD WA+G + E+L G F G+ + A +
Sbjct: 164 RWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEE 223
Query: 886 -----KDL------------------KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGA 922
L FP ++P +L L+ LL DP RL A
Sbjct: 224 TWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALD---LLKGLLVYDPSKRL----SA 276
Query: 923 NEIKKHPFF 931
E +HP+F
Sbjct: 277 AEALRHPYF 285
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 80.3 bits (198), Expect = 1e-16
Identities = 63/283 (22%), Positives = 120/283 (42%), Gaps = 58/283 (20%)
Query: 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKTKT------------------ 715
+K +G G G LV+ G+ + +K ++ M + + ++
Sbjct: 5 VKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQY 64
Query: 716 --------HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIY 767
++ ++ DYC GG+L+ ++ Q + ED + + ++ +AL+++H + I++
Sbjct: 65 QESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILH 124
Query: 768 RDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRA 827
RD+K +N+ L +G + L DF ++ +L +T E R
Sbjct: 125 RDIKSQNIFLTKDGTIKLGDFGIA--------RVLNSTVELAR----------------- 159
Query: 828 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 887
+ +GT Y++PEI + + D WALG +LYEM F + I+
Sbjct: 160 --TCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGS 217
Query: 888 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930
P S+ S + L+ +L R+P+ R N I + F
Sbjct: 218 YP-PVSSHYSYDLRNLVSQLFKRNPRDR----PSVNSILEKNF 255
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 80.7 bits (200), Expect = 4e-16
Identities = 60/224 (26%), Positives = 93/224 (41%), Gaps = 56/224 (25%)
Query: 739 KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798
+L++ R+ +++ AL+Y+H +I+RDLKP N+LL + V L DF L+ S
Sbjct: 102 NILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELE 161
Query: 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWAL 857
+ +NPV + + +V T Y APEI+ G+ T VD W++
Sbjct: 162 E--------------NPENPV-LTD-------YVATRWYRAPEILLGSTRYTKGVDMWSV 199
Query: 858 GILLYEMLYGYTPFRGKTRQKTFANIL-------HKDL-------------KFPSSTPTS 897
G +L EML G F G + I+ +D+ PS
Sbjct: 200 GCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKP 259
Query: 898 LH---------AKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
L A L+ +LL +P RL A E +HP+
Sbjct: 260 LDELLPKASDDALDLLKKLLVFNPNKRL----TAEEALEHPYVA 299
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 79.1 bits (196), Expect = 6e-16
Identities = 82/318 (25%), Positives = 127/318 (39%), Gaps = 92/318 (28%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAM-------DKGVMLNRNKT---------- 713
++ IK LG G GSV+L +G+ A+K M ++ + L K+
Sbjct: 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNI 60
Query: 714 ---------KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG 764
+ + +Y G L+ L+ + K E +R +++ L ++H G
Sbjct: 61 VKLKEVFRENDELYFVFEYMEG-NLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG 119
Query: 765 IIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEP 824
+RDLKPEN+L+ G V + DF L+ +P P T+
Sbjct: 120 FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP----PYTD------------------ 157
Query: 825 MRASNSFVGTEEYIAPEII-AGAGHTSAVDWWALGILLYEMLYGYTP-FRGKTR----QK 878
+V T Y APEI+ ++S VD WALG ++ E LY P F G + K
Sbjct: 158 ------YVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAE-LYTLRPLFPGSSEIDQLYK 210
Query: 879 TFANIL----------HKDL------KFPSSTPTSLH---------AKQLMYRLLHRDPK 913
+ +L L +FP PTSLH A L+ +L DPK
Sbjct: 211 ICS-VLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPK 269
Query: 914 SRLGSHEGANEIKKHPFF 931
R A++ +HP+F
Sbjct: 270 KRP----TASQALQHPYF 283
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 79.6 bits (197), Expect = 8e-16
Identities = 70/325 (21%), Positives = 119/325 (36%), Gaps = 98/325 (30%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMD---------KGV-----MLNRNKTK 714
++ + P+GSG G V +G+ A+K + K +L +
Sbjct: 15 DRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHE 74
Query: 715 THVCLITDYCPGGEL------FL---LLDRQ-----PTKVLKEDAVRFYAAEVVVALEYL 760
+ L+ + P L +L L+ + L +D ++F +++ L+Y+
Sbjct: 75 NVIGLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKCQKLSDDHIQFLVYQILRGLKYI 134
Query: 761 HCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVF 820
H GII+RDLKP N+ + + + + DF L+ RH
Sbjct: 135 HSAGIIHRDLKPSNIAVNEDCELKILDFGLA-------------------RHT------- 168
Query: 821 MAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRG------ 873
+ M +V T Y APEI+ H VD W++G ++ E+L G T F G
Sbjct: 169 -DDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQ 224
Query: 874 ------------------------KTRQKTFANILHKDLK--FPSSTPTSLHAKQLMYRL 907
+ ++ + KD K F + P A L+ ++
Sbjct: 225 LKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPL---AIDLLEKM 281
Query: 908 LHRDPKSRLGSHEGANEIKKHPFFK 932
L DP R+ A E HP+
Sbjct: 282 LVLDPDKRI----TAAEALAHPYLA 302
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 78.2 bits (193), Expect = 9e-16
Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 34/214 (15%)
Query: 719 LITDYCPGGELFLLLD--RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 776
++ + G+L ++ ++ +++ E + Y ++ ALE++H + I++RD+KP NV
Sbjct: 79 IVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVF 138
Query: 777 LQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEE 836
+ G V L D L S K TT A++S VGT
Sbjct: 139 ITATGVVKLGDLGLGRFFSSK------TT---------------------AAHSLVGTPY 171
Query: 837 YIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ--KTFANILHKDLKFPSST 894
Y++PE I G+ D W+LG LLYEM +PF G I D +
Sbjct: 172 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPAD 231
Query: 895 PTSLHAKQLMYRLLHRDPKSRLGS---HEGANEI 925
S + L+ R ++ DP+ R + A E+
Sbjct: 232 HYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Score = 78.9 bits (195), Expect = 1e-15
Identities = 56/229 (24%), Positives = 92/229 (40%), Gaps = 60/229 (26%)
Query: 735 RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 794
QP L E+ +R++ +++ L+Y+H +I+RDLKP N+L+ + + + DF ++
Sbjct: 101 DQP---LTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGL 157
Query: 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII-AGAGHTSAVD 853
S P E K FM E +V T Y APE++ + +T+A+D
Sbjct: 158 SSSPT-------EHKY---------FMTE-------YVATRWYRAPELLLSLPEYTTAID 194
Query: 854 WWALGILLYEMLYGYTPFRGKTRQKTFANIL-------HKDLK-------------FPSS 893
W++G + EML F GK IL + L P
Sbjct: 195 MWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRK 254
Query: 894 TPTSLH---------AKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933
P A L+ ++L DP+ R+ + +HPF
Sbjct: 255 QPVPWSKIFPKASPEALDLLSQMLQFDPEERI----TVEQALQHPFLAQ 299
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334 |
| >gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 77.7 bits (192), Expect = 2e-15
Identities = 61/238 (25%), Positives = 96/238 (40%), Gaps = 64/238 (26%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMD--------------------------- 703
F ++ +G G G V+ +GQ A+K MD
Sbjct: 8 FELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIAT 67
Query: 704 -KGVMLNRNKTKTHVCL--ITDYCPGGELFLLLD--RQPTKVLKEDAVRFYAAEVVVALE 758
G + +N L + + C GG + L+ R+ K LKE+ + + E + L
Sbjct: 68 FYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLA 127
Query: 759 YLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNP 818
YLH +I+RD+K +N+LL N V L DF +S L +T ++
Sbjct: 128 YLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSA--------QLDSTLGRR--------- 170
Query: 819 VFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPF 871
N+F+GT ++APE+IA A + + D W+LGI E+ G P
Sbjct: 171 ----------NTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPL 218
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 77.9 bits (192), Expect = 2e-15
Identities = 66/232 (28%), Positives = 89/232 (38%), Gaps = 74/232 (31%)
Query: 677 LGSGDTGSVHLVELCGSGQYFAMK--------AMDKGVM--LNRNKTKTHVCLIT----- 721
LG G GSV L +G FA+K + K ++ L NK+ ++
Sbjct: 9 LGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAF 68
Query: 722 ------------DYCPGGELFLLLDRQPTKVLK------EDAVRFYAAEVVVALEYLHCQ 763
+YC GG L D KV K E + A V+ L YLH +
Sbjct: 69 LDESSSSIGIAMEYCEGGSL----DSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR 124
Query: 764 GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAE 823
II+RD+KP N+LL G V L DF +S G+
Sbjct: 125 KIIHRDIKPSNILLTRKGQVKLCDFGVS----------------------GE-------- 154
Query: 824 PMRASNS----FVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 871
NS F GT Y+APE I G ++ D W+LG+ L E+ PF
Sbjct: 155 ---LVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPF 203
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 77.5 bits (191), Expect = 2e-15
Identities = 70/290 (24%), Positives = 115/290 (39%), Gaps = 80/290 (27%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMK--------AMDK---------------- 704
+ I LG+G+ GSV V+ +G A K ++ K
Sbjct: 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPY 64
Query: 705 -----GVMLNRNKTKTHVCLITDYCPGGELFLLLDRQPTKV--LKEDAVRFYAAEVVVAL 757
G LN N ++C+ ++ G L DR K + + + A VV L
Sbjct: 65 IVSFYGAFLNEN----NICMCMEFMDCGSL----DRIYKKGGPIPVEILGKIAVAVVEGL 116
Query: 758 EYLH-CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQ 816
YL+ I++RD+KP N+L+ G + L DF +S +L+
Sbjct: 117 TYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVS------GELI--------------- 155
Query: 817 NPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF----- 871
N + +++FVGT Y++PE I G +T D W+LGI + E+ G PF
Sbjct: 156 NSI--------ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNI 207
Query: 872 --RGKTRQKTFANILHKDLKFPSST-PTSL---HAKQLMYRLLHRDPKSR 915
G+ ++L + ++ P P+S + + L +DP R
Sbjct: 208 DDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTER 257
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 79.3 bits (195), Expect = 3e-15
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 40/212 (18%)
Query: 712 KTKTHVCLITDYCPGGELFLLLDRQPTKVLKED--------AVRFYAAEVVVALEYLHCQ 763
K+ + LI +Y GG+L ++Q + LKE + FY ++V+AL+ +H +
Sbjct: 135 KSDDKLLLIMEYGSGGDL----NKQIKQRLKEHLPFQEYEVGLLFY--QIVLALDEVHSR 188
Query: 764 GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAE 823
+++RDLK N+ L G + L DF S K + V
Sbjct: 189 KMMHRDLKSANIFLMPTGIIKLGDFGFS---------------------KQYSDSV---- 223
Query: 824 PMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883
+ ++SF GT Y+APE+ ++ D W+LG++LYE+L + PF+G ++++ +
Sbjct: 224 SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQV 283
Query: 884 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
L+ P P S K L+ LL ++P R
Sbjct: 284 LYGKYD-PFPCPVSSGMKALLDPLLSKNPALR 314
|
Length = 478 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 77.4 bits (190), Expect = 3e-15
Identities = 80/321 (24%), Positives = 129/321 (40%), Gaps = 67/321 (20%)
Query: 655 AIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKTK 714
A+Q ++ G+ ++ +G G TG V + +G+ A+K MD R
Sbjct: 10 ALQLVVSPGDP--REYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLF 67
Query: 715 THVCLITDY------------CPGGELFL---------LLDRQPTKVLKEDAVRFYAAEV 753
V ++ DY G EL++ L D + E+ + V
Sbjct: 68 NEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSV 127
Query: 754 VVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 813
+ AL YLH QG+I+RD+K +++LL +G + L+DF S E +R
Sbjct: 128 LRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVS----------KEVPKR-- 175
Query: 814 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 873
S VGT ++APE+I+ + + VD W+LGI++ EM+ G P+
Sbjct: 176 ---------------KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFN 220
Query: 874 KTRQKTFANI---LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930
+ + I L +K + L + +L R+P R A E+ +HPF
Sbjct: 221 EPPLQAMRRIRDNLPPRVKDSHKVSSVLRG--FLDLMLVREPSQR----ATAQELLQHPF 274
Query: 931 FKGVNWALVRCMNPPELDAPL 951
K PP PL
Sbjct: 275 LK--------LAGPPSCIVPL 287
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 75.9 bits (186), Expect = 9e-15
Identities = 72/279 (25%), Positives = 120/279 (43%), Gaps = 55/279 (19%)
Query: 677 LGSGDTGSVHLVELCGSGQYFAMKAMD------KGVMLNR------NKTKTHVCLITDYC 724
+G G +G+V+ +GQ A+K M+ K +++N NK V + Y
Sbjct: 27 IGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 86
Query: 725 PGGELFLLL---------DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 775
G EL++++ D + E + E + AL++LH +I+RD+K +N+
Sbjct: 87 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNI 146
Query: 776 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTE 835
LL +G V LTDF T E+ +R ++ VGT
Sbjct: 147 LLGMDGSVKLTDFGFCA----------QITPEQSKR-----------------STMVGTP 179
Query: 836 EYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTP 895
++APE++ + VD W+LGI+ EM+ G P+ + + ++ + P
Sbjct: 180 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-LIATNGTPELQNP 238
Query: 896 TSLHA--KQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
L A + + R L D R GS A E+ +HPF K
Sbjct: 239 ERLSAVFRDFLNRCLEMDVDRR-GS---AKELLQHPFLK 273
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Score = 76.3 bits (188), Expect = 1e-14
Identities = 81/365 (22%), Positives = 138/365 (37%), Gaps = 97/365 (26%)
Query: 670 HFRPIKPLGSGDTGSVHLVELCGS--GQYFAMK----AMDKGVMLNR--------NKTKT 715
+ IK LG G G V + + A+K K ++ R +
Sbjct: 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRG 60
Query: 716 H---VCL----ITDYCPGGELFL---LLDRQPTKVLK-----EDA-VRFYAAEVVVALEY 759
H CL I EL+L L++ ++++ DA + + +++ L+Y
Sbjct: 61 HKNITCLYDMDIVFPGNFNELYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKY 120
Query: 760 LHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPV 819
+H +++RDLKP N+L+ + + + DF L+ S P +N
Sbjct: 121 IHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENP----------------GENAG 164
Query: 820 FMAEPMRASNSFVGTEEYIAPEI-IAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878
FM E +V T Y APEI ++ +T A+D W++G +L E+L F+GK
Sbjct: 165 FMTE-------YVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVD 217
Query: 879 TFANILH----------------------KDL------KFPSSTPTSLH-AKQLMYRLLH 909
IL + L F S P + A L+ +LL
Sbjct: 218 QLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLA 277
Query: 910 RDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDTEKEYKVVDPGMQD 969
DP R+ E +HP+ L +P D P+ + ++ D M++
Sbjct: 278 FDPTKRISVEEAL----EHPY-------LAIWHDPD--DEPVCQKPFDFSFESED-SMEE 323
Query: 970 LQQNV 974
L+ +
Sbjct: 324 LRDMI 328
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 74.8 bits (184), Expect = 1e-14
Identities = 59/228 (25%), Positives = 102/228 (44%), Gaps = 43/228 (18%)
Query: 712 KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLK 771
T+ ++ + +Y PGG + L R + +E VRF+ +V+ L YLH +GI++RDLK
Sbjct: 78 TTEEYLSIFLEYVPGGSIGSCL-RTYGR-FEEQLVRFFTEQVLEGLAYLHSKGILHRDLK 135
Query: 772 PENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSF 831
+N+L+ +G ++DF +S K+ N + S
Sbjct: 136 ADNLLVDADGICKISDFGIS-----------------KKSDDIYDN--------DQNMSM 170
Query: 832 VGTEEYIAPEII--AGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI--LHKD 887
G+ ++APE+I G+++ VD W+LG ++ EM G P+ + ++ A + L
Sbjct: 171 QGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPW---SDEEAIAAMFKLGNK 227
Query: 888 LKFPSSTP-----TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930
P P S A + +P +R A E+ +HPF
Sbjct: 228 RSAPPIPPDVSMNLSPVALDFLNACFTINPDNR----PTARELLQHPF 271
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 74.7 bits (184), Expect = 2e-14
Identities = 58/224 (25%), Positives = 86/224 (38%), Gaps = 67/224 (29%)
Query: 741 LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800
L E VR Y +++ +E+ H II+RD+KPEN+L+ +G V L DF +
Sbjct: 97 LDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFA--------- 147
Query: 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGI 859
+A P +V T Y APE++ G + AVD WA+G
Sbjct: 148 ------------------RTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGC 189
Query: 860 LLYEMLYGYTPFRGKT------------------------RQKTFANILHKDLK------ 889
L+ EML G F G + + FA + ++K
Sbjct: 190 LVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLE 249
Query: 890 --FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
FP + L L + L DP R S +++ H FF
Sbjct: 250 KRFPKLSGLVL---DLAKQCLRIDPDDRPSS----SQLLHHEFF 286
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 74.2 bits (182), Expect = 2e-14
Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 33/214 (15%)
Query: 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ 778
++ +YC GG+L ++RQ + ED + + ++ + L+++H + I++RD+K +N+ L
Sbjct: 76 IVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLS 135
Query: 779 GNGHVS-LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEY 837
NG V+ L DF ++ + + M + + VGT Y
Sbjct: 136 KNGMVAKLGDFGIARQ---------------------------LNDSMELAYTCVGTPYY 168
Query: 838 IAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTS 897
++PEI + + D W+LG +LYE+ PF G + I P S S
Sbjct: 169 LSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFA-PISPNFS 227
Query: 898 LHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
+ L+ +L P+ R I K PF
Sbjct: 228 RDLRSLISQLFKVSPRDR----PSITSILKRPFL 257
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 73.3 bits (180), Expect = 4e-14
Identities = 53/216 (24%), Positives = 85/216 (39%), Gaps = 30/216 (13%)
Query: 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 775
+ + +Y PGG + L + L E R Y +++ +EYLH I++RD+K N+
Sbjct: 78 TLSIFMEYMPGGSVKDQL--KAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANI 135
Query: 776 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTE 835
L G+V L DF S KR + M S GT
Sbjct: 136 LRDSAGNVKLGDFGAS-----------------KRLQTICSSGTGM-------KSVTGTP 171
Query: 836 EYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTP 895
+++PE+I+G G+ D W++G + EML P+ I + +
Sbjct: 172 YWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSH 231
Query: 896 TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
S A+ + R + K R A E+ +H F
Sbjct: 232 VSPDARNFLRRTFVENAKKR----PSAEELLRHFFV 263
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 73.9 bits (182), Expect = 4e-14
Identities = 64/249 (25%), Positives = 97/249 (38%), Gaps = 74/249 (29%)
Query: 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ 778
L+ +YC +L LLD PT E V+ +++ L+YLH II+RDLK N+LL
Sbjct: 85 LVMEYCEQ-DLASLLDNMPTP-FSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLT 142
Query: 779 GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYI 838
G + + DF L+ + + P V T Y
Sbjct: 143 DKGCLKIADFGLARTYGLPAKPMTPK---------------------------VVTLWYR 175
Query: 839 APEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKT---------------------- 875
APE++ G +T+A+D WA+G +L E+L GK+
Sbjct: 176 APELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPG 235
Query: 876 ------------RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 923
++ + N+ H KFP + L +L+ LL DPK R A
Sbjct: 236 FSDLPLVGKFTLPKQPYNNLKH---KFPWLSEAGL---RLLNFLLMYDPKKRA----TAE 285
Query: 924 EIKKHPFFK 932
E + +FK
Sbjct: 286 EALESSYFK 294
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 72.9 bits (179), Expect = 5e-14
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 36/203 (17%)
Query: 725 PGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NG 781
PGG L LL + P K E + FY +++ L+YLH I++RD+K +NVL+ +G
Sbjct: 88 PGGSLSALLRSKWGPLKD-NEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSG 146
Query: 782 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPE 841
V ++DF S +R G NP + +F GT +Y+APE
Sbjct: 147 VVKISDFGTS------------------KRLAG-INPC--------TETFTGTLQYMAPE 179
Query: 842 IIAGA--GHTSAVDWWALGILLYEMLYGYTPFR--GKTRQKTFANILHKDLKFPSSTPTS 897
+I G+ + D W+LG + EM G PF G+ + F + K S
Sbjct: 180 VIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHP-EIPESLS 238
Query: 898 LHAKQLMYRLLHRDPKSRLGSHE 920
AK + R DP R +H+
Sbjct: 239 AEAKNFILRCFEPDPDKRASAHD 261
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 73.2 bits (179), Expect = 6e-14
Identities = 71/279 (25%), Positives = 120/279 (43%), Gaps = 55/279 (19%)
Query: 677 LGSGDTGSVHLVELCGSGQYFAMKAMD------KGVMLNR------NKTKTHVCLITDYC 724
+G G +G+V+ +GQ A++ M+ K +++N NK V + Y
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 725 PGGELFLLL---------DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 775
G EL++++ D + E + E + ALE+LH +I+RD+K +N+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNI 147
Query: 776 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTE 835
LL +G V LTDF T E+ +R ++ VGT
Sbjct: 148 LLGMDGSVKLTDFGFCA----------QITPEQSKR-----------------STMVGTP 180
Query: 836 EYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTP 895
++APE++ + VD W+LGI+ EM+ G P+ + + ++ + P
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNP 239
Query: 896 TSLHA--KQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
L A + + R L D + R GS A E+ +H F K
Sbjct: 240 EKLSAIFRDFLNRCLDMDVEKR-GS---AKELLQHQFLK 274
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 72.7 bits (179), Expect = 8e-14
Identities = 55/225 (24%), Positives = 90/225 (40%), Gaps = 64/225 (28%)
Query: 735 RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 794
++P L E V+ Y +++ +L+++H GI +RD+KPEN+L++ + + L DF
Sbjct: 94 KRP---LPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKDD-ILKLADFGSCRGI 149
Query: 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVD 853
KP P T ++ T Y APE + G + +D
Sbjct: 150 YSKP----PYT------------------------EYISTRWYRAPECLLTDGYYGPKMD 181
Query: 854 WWALGILLYEMLYGYTPFRGKTR------------------QKTFANILHKDLKFPSSTP 895
WA+G + +E+L + F G K F H + FPS
Sbjct: 182 IWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKG 241
Query: 896 TSL-----HAKQ----LMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
T L +A L+ +LL DP R+ + + HP+F
Sbjct: 242 TGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR----HPYF 282
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 72.4 bits (177), Expect = 1e-13
Identities = 72/280 (25%), Positives = 118/280 (42%), Gaps = 57/280 (20%)
Query: 677 LGSGDTGSVHLVELCGSGQYFAMKAMD------KGVMLNRN------KTKTHVCLITDYC 724
+G G +G+V +GQ A+K ++ K +++N K V + +
Sbjct: 27 IGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFL 86
Query: 725 PGGELFLLL---------DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 775
G ELF+++ D + E + E + ALE+LH +I+RD+K +NV
Sbjct: 87 VGDELFVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNV 146
Query: 776 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTE 835
LL +G V LTDF T E+ +R ++ VGT
Sbjct: 147 LLGMDGSVKLTDFGFCA----------QITPEQSKR-----------------STMVGTP 179
Query: 836 EYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK---DLKFPS 892
++APE++ + VD W+LGI+ EM+ G P+ + + I +L+ P
Sbjct: 180 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPE 239
Query: 893 STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
+ + R L D + R GS A E+ +HPF K
Sbjct: 240 KLSPIF--RDFLNRCLEMDVEKR-GS---AKELLQHPFLK 273
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Score = 72.0 bits (176), Expect = 1e-13
Identities = 61/228 (26%), Positives = 96/228 (42%), Gaps = 48/228 (21%)
Query: 719 LITDYCPGGE---LFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 775
++ ++CPGG + L LDR L E ++ +++ AL+YLH II+RDLK NV
Sbjct: 86 IMIEFCPGGAVDAIMLELDRG----LTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNV 141
Query: 776 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTE 835
LL +G + L DF +S +RR +SF+GT
Sbjct: 142 LLTLDGDIKLADFGVSA----------KNVKTLQRR-----------------DSFIGTP 174
Query: 836 EYIAPEII-----AGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD--- 887
++APE++ + D W+LGI L EM P + I +
Sbjct: 175 YWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPT 234
Query: 888 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935
L PS S+ + + L + P++R A ++ +HPF V
Sbjct: 235 LSQPSK--WSMEFRDFLKTALDKHPETR----PSAAQLLEHPFVSSVT 276
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 73.8 bits (181), Expect = 2e-13
Identities = 76/286 (26%), Positives = 121/286 (42%), Gaps = 78/286 (27%)
Query: 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKTKTHVC---------------- 718
LGSG TG+V + G+ FA+K +D M ++N+ + VC
Sbjct: 40 LGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHED 99
Query: 719 ----------------LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAE-------VVV 755
L+ DY G+L RQ K + F E V++
Sbjct: 100 FAKKDPRNPENVLMIALVLDYANAGDL-----RQEIKSRAKTNRTFREHEAGLLFIQVLL 154
Query: 756 ALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQ 815
A+ ++H + +I+RD+K N+LL NG V L DF S + + T ++ R
Sbjct: 155 AVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAA-------TVSDDVGR---- 203
Query: 816 QNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 875
+F GT Y+APEI ++ D ++LG+LLYE+L PF G+
Sbjct: 204 --------------TFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN 249
Query: 876 RQKTFANILHKDL--KF-PSSTPTSLHAKQLMYRLLHRDPKSRLGS 918
++ ++HK L ++ P S ++++ LL DPK R S
Sbjct: 250 MEE----VMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSS 291
|
Length = 496 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 72.6 bits (179), Expect = 2e-13
Identities = 53/231 (22%), Positives = 93/231 (40%), Gaps = 68/231 (29%)
Query: 739 KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798
+ L +D ++++ +++ L+YLH +I+RDLKP N+L+ N + + DF L+
Sbjct: 98 QPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLA------- 150
Query: 799 QLLLPTTNEKKRRHKGQQ--NPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWW 855
R F+ E +V T Y APE++ + T A+D W
Sbjct: 151 ------------RGVDPDEDEKGFLTE-------YVVTRWYRAPELLLSSSRYTKAIDIW 191
Query: 856 ALGILLYEMLYGYTPFRGKT-----------------------RQKTFANIL-------H 885
++G + E+L F G+ + N L
Sbjct: 192 SVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPK 251
Query: 886 KDL--KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934
K L FP ++P ++ L+ ++L DPK R+ A+E HP+ +
Sbjct: 252 KPLSKLFPGASPEAID---LLEKMLVFDPKKRI----TADEALAHPYLAQL 295
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Score = 71.2 bits (174), Expect = 3e-13
Identities = 49/158 (31%), Positives = 73/158 (46%), Gaps = 32/158 (20%)
Query: 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ 778
L+ ++C G + L+ LKED + + E++ L +LH +I+RD+K +NVLL
Sbjct: 96 LVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLT 155
Query: 779 GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYI 838
N V L DF +S QL R G++ N+F+GT ++
Sbjct: 156 ENAEVKLVDFGVSA------QL---------DRTVGRR------------NTFIGTPYWM 188
Query: 839 APEIIAGAGHTSAV-----DWWALGILLYEMLYGYTPF 871
APE+IA + A D W+LGI EM G P
Sbjct: 189 APEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPL 226
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 71.1 bits (175), Expect = 4e-13
Identities = 64/255 (25%), Positives = 101/255 (39%), Gaps = 76/255 (29%)
Query: 713 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEV-------VVALEYLHCQGI 765
K+++ L+ ++ D + KV+K+ ++ A++ + LEYLH I
Sbjct: 73 HKSNINLVFEFMET-------DLE--KVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWI 123
Query: 766 IYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPM 825
++RDLKP N+L+ +G + L DF L+ P
Sbjct: 124 LHRDLKPNNLLIASDGVLKLADFGLAR---------------------------SFGSPN 156
Query: 826 RASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPF-RGKT--RQ--KT 879
R V T Y APE++ GA H VD W++G + E+L PF G + Q K
Sbjct: 157 RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLR-VPFLPGDSDIDQLGKI 215
Query: 880 FANI-------------LHKDLKFPSSTPTSLH---------AKQLMYRLLHRDPKSRLG 917
F + L ++F PT L A L+ RLL +P R+
Sbjct: 216 FEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRI- 274
Query: 918 SHEGANEIKKHPFFK 932
A + +HP+F
Sbjct: 275 ---TARQALEHPYFS 286
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Score = 71.7 bits (176), Expect = 4e-13
Identities = 61/251 (24%), Positives = 98/251 (39%), Gaps = 64/251 (25%)
Query: 741 LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800
L D V+ + +++ L+YLH GI++RD+KP N+L+ N + + DF L+
Sbjct: 100 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLA--------- 150
Query: 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGI 859
+ +H Q+ V T+ Y APEI+ G+ H TSAVD W++G
Sbjct: 151 --RVEEPDESKHMTQE---------------VVTQYYRAPEILMGSRHYTSAVDIWSVGC 193
Query: 860 LLYEMLYGYTPFR-----------------------GKTRQKTFANILHKDLKFPS---- 892
+ E+L F+ + A+IL K PS
Sbjct: 194 IFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVL 253
Query: 893 ---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNP---PE 946
S+ + A L+ R+L DP R+ A + HP+ CM
Sbjct: 254 YTLSSQATHEAVHLLCRMLVFDPDKRI----SAADALAHPYLDEGRLRYHTCMCKCCYTT 309
Query: 947 LDAPLFATDTE 957
++ +D E
Sbjct: 310 SGGRVYTSDFE 320
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 70.5 bits (173), Expect = 4e-13
Identities = 62/254 (24%), Positives = 99/254 (38%), Gaps = 69/254 (27%)
Query: 710 RNKTKTHVCLITDYCPGGELFLL--LDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIY 767
R K K H L+ +YC + +L L++ P V E ++ + + A+ + H I+
Sbjct: 70 RRKRKLH--LVFEYC---DHTVLNELEKNPRGV-PEHLIKKIIWQTLQAVNFCHKHNCIH 123
Query: 768 RDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRA 827
RD+KPEN+L+ G + L DF + ++L P
Sbjct: 124 RDVKPENILITKQGQIKLCDFGFA-------RILTG--------------------PGDD 156
Query: 828 SNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR-------QKT 879
+V T Y APE++ G + VD WA+G + E+L G + GK+ +KT
Sbjct: 157 YTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKT 216
Query: 880 FANIL--H----------KDLKFPSSTP----------TSLHAKQLMYRLLHRDPKSRLG 917
+++ H K L P S A + L DP RL
Sbjct: 217 LGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLS 276
Query: 918 SHEGANEIKKHPFF 931
E+ +HP+F
Sbjct: 277 C----EELLEHPYF 286
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Score = 73.3 bits (180), Expect = 5e-13
Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 22/169 (13%)
Query: 757 LEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQ 816
+EY+H +G+++RDLKP+N+LL G V + D+ + + + LL ++
Sbjct: 126 IEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDE-------- 177
Query: 817 NPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 876
M VGT +Y+APE + G + + D +ALG++LY+ML P+R K
Sbjct: 178 -RNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKG 236
Query: 877 QKTFANILHKD-LKFPSST------PTSLHAKQLMYRLLHRDPKSRLGS 918
+K I ++D + P P L Q+ + L DP R S
Sbjct: 237 RK----ISYRDVILSPIEVAPYREIPPFL--SQIAMKALAVDPAERYSS 279
|
Length = 932 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 69.7 bits (170), Expect = 9e-13
Identities = 64/222 (28%), Positives = 96/222 (43%), Gaps = 47/222 (21%)
Query: 715 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 774
T + +I +Y GG LL P L+E + E++ L+YLH + I+RD+K N
Sbjct: 75 TKLWIIMEYLGGGSALDLLKPGP---LEETYIATILREILKGLDYLHSERKIHRDIKAAN 131
Query: 775 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGT 834
VLL G V L DF ++ QL T + KR N+FVGT
Sbjct: 132 VLLSEQGDVKLADFGVA------GQL---TDTQIKR------------------NTFVGT 164
Query: 835 EEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSST 894
++APE+I + + D W+LGI E+ G P + I P ++
Sbjct: 165 PFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLI-------PKNS 217
Query: 895 PTSLHA------KQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930
P +L K+ + L++DP+ R A E+ KH F
Sbjct: 218 PPTLEGQYSKPFKEFVEACLNKDPRFR----PTAKELLKHKF 255
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 69.2 bits (169), Expect = 1e-12
Identities = 53/215 (24%), Positives = 87/215 (40%), Gaps = 28/215 (13%)
Query: 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 776
+ + ++ PGG + +L+R L E Y +++ + YLH +++RD+K NV+
Sbjct: 77 ISIFMEFVPGGSISSILNR--FGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVM 134
Query: 777 LQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEE 836
L NG + L DF C +L + M + M GT
Sbjct: 135 LMPNGIIKLIDF------GCARRLAWVGLHGTHSN---------MLKSMH------GTPY 173
Query: 837 YIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR-QKTFANILHKDLKFPSSTP 895
++APE+I +G+ D W++G ++EM G P R F H+ L
Sbjct: 174 WMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDS 233
Query: 896 TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930
S A + L RD R A ++ +H F
Sbjct: 234 FSAAAIDFVTSCLTRDQHER----PSALQLLRHDF 264
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|131984 TIGR02938, nifL_nitrog, nitrogen fixation negative regulator NifL | Back alignment and domain information |
|---|
Score = 70.7 bits (173), Expect = 1e-12
Identities = 31/92 (33%), Positives = 56/92 (60%)
Query: 214 IMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKD 273
I+YA+ F ++TGYT +E++G+N L T PE + +L + + G+LLN +KD
Sbjct: 26 ILYANDAFTRITGYTKEEIIGKNESVLSNHTTPPEVYQALWGSLAEQKPWAGKLLNRRKD 85
Query: 274 GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSK 305
G + LT+AP+ ++ G+ F+GM ++++
Sbjct: 86 GELYLAELTVAPVLNEAGETTHFLGMHRDITE 117
|
NifL is a modulator of the nitrogen fixation positive regulator protein NifA, and is therefore a negative regulator. It binds NifA. NifA and NifL are encoded by adjacent genes [Central intermediary metabolism, Nitrogen fixation, Regulatory functions, Protein interactions]. Length = 494 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 69.0 bits (168), Expect = 1e-12
Identities = 65/222 (29%), Positives = 96/222 (43%), Gaps = 47/222 (21%)
Query: 715 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 774
T + +I +Y GG LL+ P L E + E++ L+YLH + I+RD+K N
Sbjct: 75 TKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSEKKIHRDIKAAN 131
Query: 775 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGT 834
VLL +G V L DF ++ QL T + KR N+FVGT
Sbjct: 132 VLLSEHGEVKLADFGVA------GQL---TDTQIKR------------------NTFVGT 164
Query: 835 EEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSST 894
++APE+I + + S D W+LGI E+ G P K I P +
Sbjct: 165 PFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLI-------PKNN 217
Query: 895 PTSLHA------KQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930
P +L K+ + L+++P R A E+ KH F
Sbjct: 218 PPTLEGNYSKPLKEFVEACLNKEPSFR----PTAKELLKHKF 255
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Score = 69.7 bits (170), Expect = 2e-12
Identities = 82/350 (23%), Positives = 140/350 (40%), Gaps = 106/350 (30%)
Query: 668 LQHFRPIKPLGSGDTG------------SVHLVELCG--SGQYFAMKAMDKGVMLNRNKT 713
L+ ++ +KP+GSG G +V + +L Q A +A + V+L
Sbjct: 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH 79
Query: 714 KTHVCLITDYCPGG------ELFL---LLDRQPTKV----LKEDAVRFYAAEVVVALEYL 760
K + L+ + P +++L L+D +V L + + + +++ +++L
Sbjct: 80 KNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHL 139
Query: 761 HCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVF 820
H GII+RDLKP N++++ + + + DF L+ T+C TN F
Sbjct: 140 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAC--------TN-------------F 177
Query: 821 MAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR---- 876
M P +V T Y APE+I G G+ VD W++G ++ E++ G F+G
Sbjct: 178 MMTP------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQW 231
Query: 877 ------------------QKTFANI--------------LHKDLKFPSSTP----TSLHA 900
Q T N L D FPS + + A
Sbjct: 232 NKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQA 291
Query: 901 KQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAP 950
+ L+ ++L DP R+ E HP+ W +P E +AP
Sbjct: 292 RDLLSKMLVIDPDKRISVDEALR----HPYIT--VW-----YDPAEAEAP 330
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 68.5 bits (167), Expect = 2e-12
Identities = 65/219 (29%), Positives = 92/219 (42%), Gaps = 41/219 (18%)
Query: 715 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 774
T + +I +Y GG LL P E + E++ L+YLH + I+RD+K N
Sbjct: 75 TKLWIIMEYLGGGSALDLLRAGP---FDEFQIATMLKEILKGLDYLHSEKKIHRDIKAAN 131
Query: 775 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGT 834
VLL G V L DF ++ QL T + KR N+FVGT
Sbjct: 132 VLLSEQGDVKLADFGVA------GQL---TDTQIKR------------------NTFVGT 164
Query: 835 EEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSST 894
++APE+I + + S D W+LGI E+ G P + I K T
Sbjct: 165 PFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI----PKNNPPT 220
Query: 895 PT---SLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930
T S K+ + L++DP R A E+ KH F
Sbjct: 221 LTGEFSKPFKEFIDACLNKDPSFR----PTAKELLKHKF 255
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Score = 68.5 bits (167), Expect = 2e-12
Identities = 44/139 (31%), Positives = 66/139 (47%), Gaps = 27/139 (19%)
Query: 735 RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 794
++ +++ E V Y ++ ALE++H + +++RD+KP NV + G V L D L
Sbjct: 97 KKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 156
Query: 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 854
S K TT A++S VGT Y++PE I G+ D
Sbjct: 157 SSK------TT---------------------AAHSLVGTPYYMSPERIHENGYNFKSDI 189
Query: 855 WALGILLYEMLYGYTPFRG 873
W+LG LLYEM +PF G
Sbjct: 190 WSLGCLLYEMAALQSPFYG 208
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Score = 68.1 bits (166), Expect = 2e-12
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 27/139 (19%)
Query: 735 RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 794
++ +++ E V Y ++ A+E++H + +++RD+KP NV + G V L D L
Sbjct: 97 KKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 156
Query: 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 854
S K TT A++S VGT Y++PE I G+ D
Sbjct: 157 SSK------TT---------------------AAHSLVGTPYYMSPERIHENGYNFKSDI 189
Query: 855 WALGILLYEMLYGYTPFRG 873
W+LG LLYEM +PF G
Sbjct: 190 WSLGCLLYEMAALQSPFYG 208
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267 |
| >gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Score = 67.8 bits (165), Expect = 3e-12
Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 62/236 (26%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMD--------------------------- 703
F ++ +G+G G V+ +GQ A+K MD
Sbjct: 8 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 67
Query: 704 -KGVMLNRNK--TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYL 760
G + +N + L+ ++C G + L+ LKE+ + + E++ L +L
Sbjct: 68 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 127
Query: 761 HCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVF 820
H +I+RD+K +NVLL N V L DF +S + R G++
Sbjct: 128 HQHKVIHRDIKGQNVLLTENAEVKLVDFGVSA---------------QLDRTVGRR---- 168
Query: 821 MAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPF 871
N+F+GT ++APE+IA A + D W+LGI EM G P
Sbjct: 169 --------NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 216
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272 |
| >gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 68.0 bits (166), Expect = 3e-12
Identities = 63/226 (27%), Positives = 94/226 (41%), Gaps = 53/226 (23%)
Query: 722 DYCPGGELFLLLD-RQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQG 779
+Y G L L T+ + ED +R VV L++L + II+RD+KP NVL+ G
Sbjct: 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNG 138
Query: 780 NGHVSLTDFDLSCLTSCKPQLL--LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEY 837
NG V L DF +S L+ L TN +G + Y
Sbjct: 139 NGQVKLCDFGVS------GNLVASLAKTN-------------------------IGCQSY 167
Query: 838 IAPEIIAGAG------HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN---ILHKDL 888
+APE I G +T D W+LG+ + EM G P+ +T FA I+ D
Sbjct: 168 MAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGD- 226
Query: 889 KFPSSTPT--SLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
P + P+ S A+ + + L++ P R + HP+
Sbjct: 227 --PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE----HPWLV 266
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286 |
| >gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Score = 67.3 bits (164), Expect = 3e-12
Identities = 61/269 (22%), Positives = 110/269 (40%), Gaps = 55/269 (20%)
Query: 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMD--------------KGVMLNRNKTKTHVC- 718
++ +G G G V LV G+ + +K ++ + +L++ K V
Sbjct: 5 VRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAY 64
Query: 719 ------------LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGII 766
++ +C GG+L+ L Q K+L E+ V + ++ +AL+YLH + I+
Sbjct: 65 RESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHIL 124
Query: 767 YRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMR 826
+RDLK +NV L + + D ++ + +N MA
Sbjct: 125 HRDLKTQNVFLTRTNIIKVGDLGIA---------------------RVLENQCDMA---- 159
Query: 827 ASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 886
++ +GT Y++PE+ + + D WALG +YEM F K I+
Sbjct: 160 --STLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEG 217
Query: 887 DLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
L P S +L+ +L + P+ R
Sbjct: 218 KLP-PMPKDYSPELGELIATMLSKRPEKR 245
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257 |
| >gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 68.5 bits (168), Expect = 4e-12
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 25/138 (18%)
Query: 738 TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797
T+ L D ++++ +++ L+Y+H +++RDLKP N+LL N + + DF L+ +
Sbjct: 100 TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIAD-- 157
Query: 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEI-IAGAGHTSAVDWWA 856
P + H G F+ E +V T Y APEI + G+T A+D W+
Sbjct: 158 -----PEHD-----HTG-----FLTE-------YVATRWYRAPEIMLNSKGYTKAIDIWS 195
Query: 857 LGILLYEMLYGYTPFRGK 874
+G +L EML F GK
Sbjct: 196 VGCILAEMLSNRPLFPGK 213
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 67.0 bits (163), Expect = 5e-12
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 31/221 (14%)
Query: 710 RNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRD 769
R++ + + + +Y PGG + L + L E R Y +++ + YLH I++RD
Sbjct: 74 RDRAEKTLTIFMEYMPGGSVKDQL--KAYGALTESVTRKYTRQILEGMSYLHSNMIVHRD 131
Query: 770 LKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASN 829
+K N+L G+V L DF S K Q +R
Sbjct: 132 IKGANILRDSAGNVKLGDFGAS---------------------KRLQTICMSGTGIR--- 167
Query: 830 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 889
S GT +++PE+I+G G+ D W+LG + EML P+ I +
Sbjct: 168 SVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTN 227
Query: 890 FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930
+ S HA+ + + + + R A E+ +HPF
Sbjct: 228 PQLPSHISEHARDFLGCIF-VEARHR----PSAEELLRHPF 263
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Score = 68.5 bits (167), Expect = 7e-12
Identities = 57/215 (26%), Positives = 90/215 (41%), Gaps = 61/215 (28%)
Query: 746 VRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH-VSLTDFDLSCLTSCKPQLLLPT 804
V+ Y+ ++ AL Y+H + I +RDLKP+N+L+ N H + L DF
Sbjct: 172 VKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDF---------------- 215
Query: 805 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYE 863
K GQ+ S S++ + Y APE++ GA +T+ +D W+LG ++ E
Sbjct: 216 -GSAKNLLAGQR-----------SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAE 263
Query: 864 MLYGYTPFRGKTRQKTFANIL-----------------HKDLKFPSSTPTSLH------- 899
M+ GY F G++ I+ + D+KFP P L
Sbjct: 264 MILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGT 323
Query: 900 ---AKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
A + + L +P RL E + PFF
Sbjct: 324 PDDAINFISQFLKYEPLKRLNPIEALAD----PFF 354
|
Length = 440 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 66.8 bits (163), Expect = 7e-12
Identities = 54/230 (23%), Positives = 91/230 (39%), Gaps = 33/230 (14%)
Query: 707 MLNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGII 766
ML +H L ++ GG + LL + KE + Y +++ L YLH II
Sbjct: 68 MLGATCEDSHFNLFVEWMAGGSVSHLLSK--YGAFKEAVIINYTEQLLRGLSYLHENQII 125
Query: 767 YRDLKPENVLLQGNGH-VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPM 825
+RD+K N+L+ G + + DF + + L +GQ
Sbjct: 126 HRDVKGANLLIDSTGQRLRIADFG----AAAR----LAAKGTGAGEFQGQ---------- 167
Query: 826 RASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH 885
+GT ++APE++ G + + D W++G ++ EM P+ + A I
Sbjct: 168 -----LLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFK 222
Query: 886 -KDLKFPSSTPTSLH--AKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
S P L + + R L P+ R + E+ KHP F+
Sbjct: 223 IASATTAPSIPEHLSPGLRDVTLRCLELQPEDR----PPSRELLKHPVFR 268
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 7e-12
Identities = 56/206 (27%), Positives = 87/206 (42%), Gaps = 44/206 (21%)
Query: 736 QPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 794
+ ED + A +V ALEYLH + +I+RD+KP NVL+ NG V L DF +S
Sbjct: 95 DKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGIS--- 151
Query: 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAV-- 852
L + +A+ + A G + Y+APE I +
Sbjct: 152 ---GYL----VDS-------------VAKTIDA-----GCKPYMAPERINPELNQKGYDV 186
Query: 853 --DWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSST----PTSLHAKQLMYR 906
D W+LGI + E+ G P+ KT L + ++ PS S + + +
Sbjct: 187 KSDVWSLGITMIELATGRFPY---DSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNK 243
Query: 907 LLHRDPKSRLGSHEGANEIKKHPFFK 932
L ++ K R E+ +HPFF+
Sbjct: 244 CLKKNYKER----PNYPELLQHPFFE 265
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283 |
| >gnl|CDD|238075 cd00130, PAS, PAS domain; PAS motifs appear in archaea, eubacteria and eukarya | Back alignment and domain information |
|---|
Score = 61.9 bits (150), Expect = 1e-11
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 485 FVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQT 544
++ D D I++A+ + +L YS EE++G++ L PE ++ +
Sbjct: 5 VIVLDL---DGRILYANPAAEQLLGYSPEELIGKSLLDLIHPEDREELRERLENLLSGGE 61
Query: 545 DVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLD 585
VT+++ K G W L L P+RD+ GEV +GV D
Sbjct: 62 PVTLEVRLRRKDGSVIWVLVSLTPIRDEGGEVIGLLGVVRD 102
|
Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in signal transduction. Length = 103 |
| >gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Score = 65.8 bits (160), Expect = 1e-11
Identities = 72/297 (24%), Positives = 121/297 (40%), Gaps = 73/297 (24%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAM-----------DKGVMLNRN------ 711
+ F I+ +GSG G V+ +G+ A+K + + +++ ++
Sbjct: 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNI 68
Query: 712 ---------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC 762
+ K +C+ ++C GG L + T L E + + + E + L YLH
Sbjct: 69 VAYFGSYLRRDKLWICM--EFCGGGSLQDIY--HVTGPLSESQIAYVSRETLQGLYYLHS 124
Query: 763 QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 822
+G ++RD+K N+LL NGHV L DF +S + T K++
Sbjct: 125 KGKMHRDIKGANILLTDNGHVKLADFGVSAQIT--------ATIAKRK------------ 164
Query: 823 EPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEM------LYGYTPFRG 873
SF+GT ++APE+ A G+ D WA+GI E+ ++ P R
Sbjct: 165 -------SFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA 217
Query: 874 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930
T +N LK S H + L ++PK R A ++ +HPF
Sbjct: 218 LFLM-TKSNFQPPKLKDKMKWSNSFH--HFVKMALTKNPKKR----PTAEKLLQHPF 267
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 65.3 bits (159), Expect = 2e-11
Identities = 58/229 (25%), Positives = 94/229 (41%), Gaps = 52/229 (22%)
Query: 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 776
+ + T++ GG L + + P VL AV VV L YL I++RD+KP N+L
Sbjct: 74 ISICTEFMDGGSLDVY-RKIPEHVLGRIAV-----AVVKGLTYLWSLKILHRDVKPSNML 127
Query: 777 LQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEE 836
+ G V L DF +S QL+ N + + ++VGT
Sbjct: 128 VNTRGQVKLCDFGVS------TQLV---------------NSI--------AKTYVGTNA 158
Query: 837 YIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF-------ANILHKDLK 889
Y+APE I+G + D W+LGI E+ G P+ + + I+ +D
Sbjct: 159 YMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED-- 216
Query: 890 FPSSTPTSLHAKQLMY---RLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935
P P +++ ++ + + + PK R + HPF N
Sbjct: 217 -PPVLPVGQFSEKFVHFITQCMRKQPKERP----APENLMDHPFIVQYN 260
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Score = 66.0 bits (161), Expect = 2e-11
Identities = 75/320 (23%), Positives = 128/320 (40%), Gaps = 69/320 (21%)
Query: 643 PKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAM 702
P P S + +L + +GSG G+V+ V +G+ +A+K +
Sbjct: 48 PPPSSSSSSSSSSSASGSAPSAAKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVI 107
Query: 703 ----DKGVMLNRNKTKTHVCLITD------------YCPGGELFLLLDR------QPTKV 740
+ V R + + ++ D + GE+ +LL+ + T +
Sbjct: 108 YGNHEDTV---RRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHI 164
Query: 741 LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800
E + A +++ + YLH + I++RD+KP N+L+ +V + DF +S +
Sbjct: 165 ADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRI------- 217
Query: 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII-----AGAGHTSAVDWW 855
+A+ M NS VGT Y++PE I GA A D W
Sbjct: 218 --------------------LAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIW 257
Query: 856 ALGILLYEMLYGYTPFRGKTRQKTFAN----ILHKDLKFPSSTPT-SLHAKQLMYRLLHR 910
+LG+ + E G PF G RQ +A+ I P + T S + + L R
Sbjct: 258 SLGVSILEFYLGRFPF-GVGRQGDWASLMCAICMSQP--PEAPATASREFRHFISCCLQR 314
Query: 911 DPKSRLGSHEGANEIKKHPF 930
+P R A ++ +HPF
Sbjct: 315 EPAKRW----SAMQLLQHPF 330
|
Length = 353 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 65.1 bits (159), Expect = 3e-11
Identities = 62/229 (27%), Positives = 93/229 (40%), Gaps = 63/229 (27%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMD---KGVMLN---RNKTKTHVC------ 718
F + LG+G+ G V V SG A K + K + N R H C
Sbjct: 3 FEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIV 62
Query: 719 -------------LITDYCPGGELFLLLD---RQPTKVLKEDAVRFYAAEVVVALEYLHC 762
+ ++ GG L +L R P +L + ++ V+ L YL
Sbjct: 63 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPENILGKISI-----AVLRGLTYLRE 117
Query: 763 Q-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFM 821
+ I++RD+KP N+L+ G + L DF +S GQ +
Sbjct: 118 KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----------------------GQ-----L 150
Query: 822 AEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 870
+ M +NSFVGT Y++PE + G +T D W+LG+ L EM G P
Sbjct: 151 IDSM--ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYP 197
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 65.4 bits (160), Expect = 3e-11
Identities = 52/224 (23%), Positives = 81/224 (36%), Gaps = 77/224 (34%)
Query: 757 LEYLHCQGIIYRDLKPENVLLQGNGH----VSLTDFDLSCLTSCKPQLLLPTTNEKKRRH 812
+ YLH +++RDLKP N+L+ G G V + D L+ L + + L
Sbjct: 121 VHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLA---------- 170
Query: 813 KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPF 871
+PV V T Y APE++ GA H T A+D WA+G + E+L F
Sbjct: 171 --DLDPV------------VVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIF 216
Query: 872 RGKTRQKTFANILHKD-----------------------------------LKFPSS--- 893
+G+ + +N +D +PS+
Sbjct: 217 KGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLA 276
Query: 894 ------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
L+ +LL DP R+ + E HP+F
Sbjct: 277 KWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE----HPYF 316
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 5e-11
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 30/149 (20%)
Query: 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG-IIYRDLKPENVLLQGNGH 782
P GE F L ++ + E+ + ++V+AL YLH + I++RDL P N++L +
Sbjct: 94 APLGEHFNSL-KEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDK 152
Query: 783 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEI 842
V++TDF L+ + K ++ + S VGT Y PEI
Sbjct: 153 VTITDFGLA-------------------KQKQPESKL---------TSVVGTILYSCPEI 184
Query: 843 IAGAGHTSAVDWWALGILLYEMLYGYTPF 871
+ + D WA G +LY+M PF
Sbjct: 185 VKNEPYGEKADVWAFGCILYQMCTLQPPF 213
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Score = 64.3 bits (156), Expect = 5e-11
Identities = 60/230 (26%), Positives = 95/230 (41%), Gaps = 61/230 (26%)
Query: 732 LLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 791
LL+ P V + VR Y +++ A+ + H I++RD+KPEN+L+ N + L DF +
Sbjct: 89 LLEEMPNGVPP-EKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFA 147
Query: 792 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSA 851
R+ + + E +V T Y +PE++ GA + A
Sbjct: 148 -------------------RNLSEGSNANYTE-------YVATRWYRSPELLLGAPYGKA 181
Query: 852 VDWWALGILLYEMLYGYTPFRGK-------TRQKT------------FANILHKDLKFPS 892
VD W++G +L E+ G F G+ T QK ++N L+FP+
Sbjct: 182 VDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPA 241
Query: 893 ST-PTSLHAK----------QLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
P SL + LM LL +P R + + N HP F
Sbjct: 242 VNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN----HPAF 287
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287 |
| >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Score = 64.4 bits (157), Expect = 5e-11
Identities = 59/222 (26%), Positives = 86/222 (38%), Gaps = 43/222 (19%)
Query: 714 KTHVC-LITDYCPGGELFLL-LDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLK 771
+ H L+ +YC G +L + ++P L+E + + L YLH I+RD+K
Sbjct: 86 REHTAWLVMEYCLGSASDILEVHKKP---LQEVEIAAICHGALQGLAYLHSHERIHRDIK 142
Query: 772 PENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSF 831
N+LL G V L DF + L S +NSF
Sbjct: 143 AGNILLTEPGTVKLADFGSASLVS-------------------------------PANSF 171
Query: 832 VGTEEYIAPEIIAG--AGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDL 888
VGT ++APE+I G VD W+LGI E+ P +I D
Sbjct: 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS 231
Query: 889 KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930
SS S + + + L + P+ R S E+ KH F
Sbjct: 232 PTLSSNDWSDYFRNFVDSCLQKIPQDRPSSE----ELLKHRF 269
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 |
| >gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Score = 64.2 bits (156), Expect = 5e-11
Identities = 73/320 (22%), Positives = 121/320 (37%), Gaps = 92/320 (28%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAM-----DKGVMLN---------------- 709
+ P+ +G G G+V+ SG + A+K++ + G+ L+
Sbjct: 2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDH 61
Query: 710 -------------RNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVA 756
R +T V L+ ++ +L LD+ P L + ++ + +
Sbjct: 62 PNIVRLMDVCATSRTDRETKVTLVFEHV-DQDLRTYLDKVPPPGLPAETIKDLMRQFLRG 120
Query: 757 LEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQ 816
L++LH I++RDLKPEN+L+ G V L DF L+ + SC+ L
Sbjct: 121 LDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQMAL---------------- 164
Query: 817 NPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 876
PV V T Y APE++ + + + VD W++G + EM F G +
Sbjct: 165 TPV------------VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE 212
Query: 877 Q----KTFANI-LHKDLKFPSSTPTSLHA--------------------KQLMYRLLHRD 911
K F I L + +P A QL+ +L +
Sbjct: 213 ADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFN 272
Query: 912 PKSRLGSHEGANEIKKHPFF 931
P R+ A +HPFF
Sbjct: 273 PHKRI----SAFRALQHPFF 288
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288 |
| >gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 64.2 bits (156), Expect = 8e-11
Identities = 59/224 (26%), Positives = 88/224 (39%), Gaps = 70/224 (31%)
Query: 741 LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800
L ED V++ +++ L+Y+H GII+RDLKP N+ + + + + DF L+
Sbjct: 114 LSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLA--------- 164
Query: 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGI 859
RH + +V T Y APE+I H VD W++G
Sbjct: 165 ----------RHADAE-----------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGC 203
Query: 860 LLYEMLYGYTPFRGKTRQKTFANIL------------------------------HKDLK 889
++ EML G T F+GK IL KD
Sbjct: 204 IMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFS 263
Query: 890 --FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
FP ++P A L+ ++L D RL A E +HP+F
Sbjct: 264 TLFPKASP---QAVDLLEKMLELDVDKRL----TATEALEHPYF 300
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342 |
| >gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 1e-10
Identities = 56/229 (24%), Positives = 96/229 (41%), Gaps = 67/229 (29%)
Query: 741 LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800
L + +F+ +++ AL+Y+H + +RDLKP+N+L + + + DF L+ +
Sbjct: 100 LTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLA-----RVAF 154
Query: 801 L-LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWAL 857
PT +F + +V T Y APE+ + +T A+D W++
Sbjct: 155 NDTPTA-------------IFWTD-------YVATRWYRAPELCGSFFSKYTPAIDIWSI 194
Query: 858 GILLYEMLYGYTPFRGKT--------------------------RQKTFANILHKDL--- 888
G + E+L G F GK + + + + + K
Sbjct: 195 GCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVP 254
Query: 889 ---KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934
KFP++ P +L +L+ RLL DPK R A E P+FKG+
Sbjct: 255 FSQKFPNADPLAL---RLLERLLAFDPKDR----PTAEEALADPYFKGL 296
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 63.3 bits (154), Expect = 1e-10
Identities = 54/227 (23%), Positives = 85/227 (37%), Gaps = 59/227 (25%)
Query: 733 LDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 792
+D P + ++ Y +++ L + H +++RDLKP+N+L+ G + L DF L+
Sbjct: 89 MDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA- 147
Query: 793 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSA 851
R G P+R V T Y APEI+ G +++A
Sbjct: 148 ------------------RAFGV--------PVRTYTHEVVTLWYRAPEILLGCKYYSTA 181
Query: 852 VDWWALGILLYEMLYGYTPFRGKTRQKTFANILH----------------KDLK--FPSS 893
VD W+LG + EM+ F G + I D K FP
Sbjct: 182 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKW 241
Query: 894 TPTSLH---------AKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
+ L+ ++LH DP R+ + HPFF
Sbjct: 242 ARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA----HPFF 284
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 63.1 bits (154), Expect = 1e-10
Identities = 46/205 (22%), Positives = 75/205 (36%), Gaps = 51/205 (24%)
Query: 757 LEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL-TSCKPQLLLPTTNEKKRRHKGQ 815
+ YLH I++RD+K N+L+ G + + DF L+ P
Sbjct: 128 INYLHENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNP--------------- 172
Query: 816 QNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGK 874
+ R + V T Y PE++ G +T+AVD W +G + EM +GK
Sbjct: 173 KGGGGGGT--RKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGK 230
Query: 875 T---------------RQKTFANI-----LHKDLKFPSSTPT--SLHAKQ------LMYR 906
+ ++T+ F + T K L+ +
Sbjct: 231 SDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSK 290
Query: 907 LLHRDPKSRLGSHEGANEIKKHPFF 931
LL DP RL A++ +HP+F
Sbjct: 291 LLSLDPYKRL----TASDALEHPYF 311
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 62.8 bits (153), Expect = 2e-10
Identities = 57/242 (23%), Positives = 96/242 (39%), Gaps = 76/242 (31%)
Query: 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 781
D C GG L VR + +++ L Y H + +++RDLKP+N+L+ G
Sbjct: 94 DDCGGG-------------LSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERG 140
Query: 782 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPE 841
+ L DF L+ R K + P + ++ V T Y P+
Sbjct: 141 ELKLADFGLA-------------------RAK--------SVPSKTYSNEVVTLWYRPPD 173
Query: 842 IIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKT----------------RQKTFANIL 884
++ G+ +++++D W +G + YEM G F G T ++T+ +
Sbjct: 174 VLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVS 233
Query: 885 H----KDLKFPSSTPTSL-----------HAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 929
K FP P L H ++L + L +PK R+ + E KHP
Sbjct: 234 SNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAM----KHP 289
Query: 930 FF 931
+F
Sbjct: 290 YF 291
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291 |
| >gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 63.2 bits (154), Expect = 2e-10
Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 67/227 (29%)
Query: 738 TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797
++ L +D +++ +++ L+Y+H +++RDLKP N+LL N + + DF L+ TS K
Sbjct: 102 SQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEK 161
Query: 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPE-IIAGAGHTSAVDWWA 856
FM E +V T Y APE ++ + +T+A+D W+
Sbjct: 162 GD--------------------FMTE-------YVVTRWYRAPELLLNCSEYTTAIDVWS 194
Query: 857 LGILLYEMLYGYTPFRGK---TRQKTFANIL----HKDL--------------------- 888
+G + E+L F GK + K +L +DL
Sbjct: 195 VGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQ 254
Query: 889 ----KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
FP + P ++ L+ ++L DP R+ E HP+
Sbjct: 255 SFARLFPHANPLAI---DLLEKMLVFDPSKRITVEEALA----HPYL 294
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337 |
| >gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein | Back alignment and domain information |
|---|
Score = 64.9 bits (158), Expect = 2e-10
Identities = 55/215 (25%), Positives = 89/215 (41%), Gaps = 43/215 (20%)
Query: 724 CPGGELFLLLDRQPTKVLKE-----------DAVRFYAAEVVVALEYLHCQGIIYRDLKP 772
P G LF + + P + L+E + R +V+ AL H QGI++RDLKP
Sbjct: 49 APPGLLFAVFEYVPGRTLREVLAADGALPAGETGRL-MLQVLDALACAHNQGIVHRDLKP 107
Query: 773 ENVLLQGNG---HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASN 829
+N+++ G H + DF + LLP + + +
Sbjct: 108 QNIMVSQTGVRPHAKVLDFGIGT--------LLPGVRDADVAT------------LTRTT 147
Query: 830 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 889
+GT Y APE + G T D +A G++ E L G +G + A IL++ L
Sbjct: 148 EVLGTPTYCAPEQLRGEPVTPNSDLYAWGLIFLECLTGQRVVQG----ASVAEILYQQLS 203
Query: 890 -FPSSTPTSLHAK---QLMYRLLHRDPKSRLGSHE 920
S P + Q++ + L++DP+ R S
Sbjct: 204 PVDVSLPPWIAGHPLGQVLRKALNKDPRQRAASAP 238
|
This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266 |
| >gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 63.0 bits (153), Expect = 2e-10
Identities = 52/206 (25%), Positives = 86/206 (41%), Gaps = 50/206 (24%)
Query: 741 LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800
L ED ++F +++ L+Y+H GII+RDLKP N+ + + + + DF L+
Sbjct: 115 LSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA--------- 165
Query: 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGI 859
R + +V T Y APE+I H T VD W++G
Sbjct: 166 ----------RQTDSE-----------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGC 204
Query: 860 LLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH 919
++ EML G F+G I+ + TP+ ++ +L S
Sbjct: 205 IMAEMLTGKPLFKGHDHLDQLMEIMKV-----TGTPS-------------KEFVQKLQSE 246
Query: 920 EGANEIKKHPFFKGVNWA-LVRCMNP 944
+ N +KK P F+ ++ L+ NP
Sbjct: 247 DAKNYVKKLPRFRKKDFRSLLPNANP 272
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343 |
| >gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Score = 62.0 bits (151), Expect = 3e-10
Identities = 73/291 (25%), Positives = 113/291 (38%), Gaps = 71/291 (24%)
Query: 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK---------TKTHVC--------- 718
+GSG G V+ + +G A+K M + NK K+H C
Sbjct: 23 IGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGY 82
Query: 719 LITDYCPGGELFLLLDRQPT---KVLK-------EDAVRFYAAEVVVALEYL-HCQGIIY 767
ITD ++F+ ++ T K+LK ED + +V AL YL G+I+
Sbjct: 83 FITDS----DVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIH 138
Query: 768 RDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRA 827
RD+KP N+LL +G+V L DF +S + +
Sbjct: 139 RDVKPSNILLDASGNVKLCDFGISG---------------------------RLVDSKAK 171
Query: 828 SNSFVGTEEYIAPEIIAGAGHTSA----VDWWALGILLYEMLYGYTPFRG-KTRQKTFAN 882
+ S G Y+APE I D W+LGI L E+ G P++ KT +
Sbjct: 172 TRS-AGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTK 230
Query: 883 ILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
IL ++ P + S + L +D + R E+ +HPF +
Sbjct: 231 ILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKR----PKYRELLQHPFIR 277
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296 |
| >gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Score = 62.4 bits (151), Expect = 4e-10
Identities = 81/350 (23%), Positives = 137/350 (39%), Gaps = 106/350 (30%)
Query: 668 LQHFRPIKPLGSGDTG------------SVHLVELCG--SGQYFAMKAMDKGVMLNRNKT 713
L+ ++ +KP+GSG G +V + +L Q A +A + V++
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 714 KTHVCLITDYCPGGEL---------FLLLDRQPTKV----LKEDAVRFYAAEVVVALEYL 760
K + L+ + P L L+D +V L + + + +++ +++L
Sbjct: 76 KNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 135
Query: 761 HCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVF 820
H GII+RDLKP N++++ + + + DF L+ R G F
Sbjct: 136 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-------------------RTAGTS---F 173
Query: 821 MAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG------- 873
M P +V T Y APE+I G G+ VD W++G ++ EM+ F G
Sbjct: 174 MMTP------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 227
Query: 874 ---------------KTRQKTFANIL-----HKDLKFPSSTPTSL-------------HA 900
K Q T N + + L FP P SL A
Sbjct: 228 NKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQA 287
Query: 901 KQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAP 950
+ L+ ++L DP R+ +E +HP+ W +P E++AP
Sbjct: 288 RDLLSKMLVIDPAKRI----SVDEALQHPYIN--VW-----YDPAEVEAP 326
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 61.7 bits (150), Expect = 4e-10
Identities = 49/214 (22%), Positives = 88/214 (41%), Gaps = 43/214 (20%)
Query: 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL 777
LI +Y P G L L R ++ + + F ++++ ++YL Q I+RDL N+L+
Sbjct: 84 RLIMEYLPSGSLRDYLQRHRDQINLKRLLLF-SSQICKGMDYLGSQRYIHRDLAARNILV 142
Query: 778 QGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEY 837
+ V ++DF L+ +LP + + ++P+F +
Sbjct: 143 ESEDLVKISDFGLA--------KVLPEDKDYYYVKEPGESPIF----------------W 178
Query: 838 IAPEIIAGAGHTSAVDWWALGILLYEML-YG-------------YTPFRGKTRQKTFANI 883
APE + + +SA D W+ G+ LYE+ YG +G+ +
Sbjct: 179 YAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLEL 238
Query: 884 LH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
L + L P S P ++ LM +P+ R
Sbjct: 239 LKEGERLPRPPSCPDEVY--DLMKLCWEAEPQDR 270
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 62.4 bits (151), Expect = 4e-10
Identities = 52/222 (23%), Positives = 86/222 (38%), Gaps = 52/222 (23%)
Query: 741 LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800
L +D V+F +++ L+Y+H II+RDLKP N+ + + + + DF L+
Sbjct: 117 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------- 167
Query: 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGI 859
RH + +V T Y APEI+ H VD W++G
Sbjct: 168 ----------RHTDDE-----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 206
Query: 860 LLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH 919
++ E+L G T F G + L L+ + L ++ S
Sbjct: 207 IMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAEL--------------LKKISSE 248
Query: 920 EGANEIKKHPFFKGVNWALVRC-MNPPELD--APLFATDTEK 958
N I+ +N+A V NP +D + D++K
Sbjct: 249 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 290
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 61.3 bits (149), Expect = 5e-10
Identities = 49/222 (22%), Positives = 95/222 (42%), Gaps = 65/222 (29%)
Query: 741 LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800
L + V+ + +++ + + H +++RDLKP+N+L+ G + L DF L+
Sbjct: 97 LDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLA--------- 147
Query: 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGI 859
R G P+ ++ V T Y AP+++ G+ +++++D W++G
Sbjct: 148 ----------RAFGI--------PVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGC 189
Query: 860 LLYEMLYGYTPFRGKTR----------------------------QKTFANILHKDLK-- 889
++ EM+ G F G + TF +DL+
Sbjct: 190 IMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQL 249
Query: 890 FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
FP + P + L++RLL +P+ R+ +H+ HP+F
Sbjct: 250 FPHADPLGI---DLLHRLLQLNPELRISAHDALQ----HPWF 284
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Score = 61.6 bits (150), Expect = 5e-10
Identities = 62/285 (21%), Positives = 99/285 (34%), Gaps = 86/285 (30%)
Query: 685 VHLVELCGSGQYFAMKAMDKGVMLNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKED 744
V+L+E+C + K NR K + L+ ++C + +L
Sbjct: 74 VNLIEICRT----------KATPYNRYKGSFY--LVFEFC---------EHDLAGLLSNK 112
Query: 745 AVRFYAAEV-------VVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797
V+F +E+ + L Y+H I++RD+K N+L+ +G + L DF L+ S
Sbjct: 113 NVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFSLS 172
Query: 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS-AVDWWA 856
N K R+ + V T Y PE++ G +D W
Sbjct: 173 -------KNSKPNRYTNR----------------VVTLWYRPPELLLGERDYGPPIDMWG 209
Query: 857 LGILLYEMLYGYTPFRGKTRQKTFANI-------------------LHKDLKFPSSTP-- 895
G ++ EM +G T Q I L K ++ P
Sbjct: 210 AGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRK 269
Query: 896 ---------TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
HA L+ +LL DP R+ + N H FF
Sbjct: 270 VKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN----HDFF 310
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310 |
| >gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Score = 62.0 bits (150), Expect = 5e-10
Identities = 56/234 (23%), Positives = 99/234 (42%), Gaps = 55/234 (23%)
Query: 668 LQHFRPIKPLGSGDTG--------------SVHLVELCGSGQYFAMKAMDKGVMLNRNKT 713
L+ ++ +KP+GSG G ++ + Q A +A + V++
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 714 KTHVCLITDYCPGGEL---------FLLLDRQPTKV----LKEDAVRFYAAEVVVALEYL 760
K + L+ + P L L+D +V L + + + +++ +++L
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 761 HCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVF 820
H GII+RDLKP N++++ + + + DF L+ R G F
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-------------------RTAGTS---F 180
Query: 821 MAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 874
M P +V T Y APE+I G G+ VD W++G ++ EM+ G F G
Sbjct: 181 MMTP------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364 |
| >gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 61.8 bits (150), Expect = 7e-10
Identities = 66/276 (23%), Positives = 98/276 (35%), Gaps = 60/276 (21%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-----MLNRNKTKTHVCLITDYCP 725
+ IK L G G V + G +K KG ML +N V + D
Sbjct: 68 YTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTTLIEAMLLQNVNHPSVIRMKDTLV 127
Query: 726 GGE------------LFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPE 773
G L+ L ++ + + A+ ++ L YLH Q II+RD+K E
Sbjct: 128 SGAITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQ-ILEGLRYLHAQRIIHRDVKTE 186
Query: 774 NVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVG 833
N+ + V + D + Q PV P G
Sbjct: 187 NIFINDVDQVCIGDLGAA------------------------QFPV--VAPAFLG--LAG 218
Query: 834 TEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGK-TRQKTFANILHKDL--- 888
T E APE++A + S D W+ GI+L+EML Y T F + + + H L
Sbjct: 219 TVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKI 278
Query: 889 ---------KFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+FP + L + Y L R P +R
Sbjct: 279 ISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTR 314
|
Length = 357 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 61.2 bits (148), Expect = 7e-10
Identities = 51/215 (23%), Positives = 88/215 (40%), Gaps = 60/215 (27%)
Query: 746 VRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 805
V+ + +++ L Y H + +++RDLKP+N+L+ G + L DF L+ S
Sbjct: 106 VKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSI--------- 156
Query: 806 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEM 864
P + ++ V T Y P+I+ G+ +++ +D W +G + YEM
Sbjct: 157 ------------------PTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEM 198
Query: 865 LYGYTPFRGKT---------------RQKTFANILH----KDLKFPSSTPTSLHAK---- 901
G F G T ++T+ IL K +P LH
Sbjct: 199 STGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRL 258
Query: 902 -----QLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
+L+ +LL + + R+ A E KHP+F
Sbjct: 259 DSDGAELLSKLLQFEGRKRI----SAEEAMKHPYF 289
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
| >gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Score = 61.7 bits (150), Expect = 7e-10
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 28/119 (23%)
Query: 756 ALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQ 815
+++LH GII+RDLKP N++++ + + + DF L+ R G
Sbjct: 130 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-------------------RTAGT 170
Query: 816 QNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 874
FM P +V T Y APE+I G G+ VD W++G ++ EM+ G F G
Sbjct: 171 S---FMMTP------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGT 220
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 7e-10
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 32/200 (16%)
Query: 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ 778
+IT++ G L L + + + + A ++ A+EYL + I+RDL N L+
Sbjct: 79 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 138
Query: 779 GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYI 838
N V + DF LS L T + H G + P+ ++
Sbjct: 139 ENHLVKVADFGLSRL----------MTGDTYTAHAGAKFPI----------------KWT 172
Query: 839 APEIIAGAGHTSAVDWWALGILLYEM-LYGYTPFRGKTRQKTFANILHKDLKF--PSSTP 895
APE +A + D WA G+LL+E+ YG +P+ G + + +L K + P P
Sbjct: 173 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKGYRMERPEGCP 231
Query: 896 TSLHAKQLMYRLLHRDPKSR 915
++ +LM +P R
Sbjct: 232 PKVY--ELMRACWQWNPSDR 249
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Score = 60.0 bits (145), Expect = 9e-10
Identities = 46/156 (29%), Positives = 69/156 (44%), Gaps = 34/156 (21%)
Query: 712 KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLK 771
+ K +C+ +YC GG L + T L E + + E + L YLH +G ++RD+K
Sbjct: 78 REKLWICM--EYCGGGSLQDIY--HVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIK 133
Query: 772 PENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSF 831
N+LL NG V L DF ++ T KR+ SF
Sbjct: 134 GANILLTDNGDVKLADFGVAAKI---------TATIAKRK------------------SF 166
Query: 832 VGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEM 864
+GT ++APE+ A G+ D WA+GI E+
Sbjct: 167 IGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIEL 202
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267 |
| >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Score = 60.5 bits (146), Expect = 1e-09
Identities = 55/216 (25%), Positives = 86/216 (39%), Gaps = 42/216 (19%)
Query: 719 LITDYCPGGELFLL-LDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL 777
L+ +YC G LL + ++P + ++ A+ A + L YLH +I+RD+K N+LL
Sbjct: 102 LVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQ---GLAYLHSHNMIHRDIKAGNILL 158
Query: 778 QGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEY 837
G V L DF + + S +NSFVGT +
Sbjct: 159 TEPGQVKLADFGSASIAS-------------------------------PANSFVGTPYW 187
Query: 838 IAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSST 894
+APE+I + VD W+LGI E+ P +I + S
Sbjct: 188 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSN 247
Query: 895 PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930
S + + + L + P+ R S E+ KH F
Sbjct: 248 EWSDYFRNFVDSCLQKIPQDRPTS----EELLKHMF 279
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 59.1 bits (143), Expect = 2e-09
Identities = 57/230 (24%), Positives = 88/230 (38%), Gaps = 62/230 (26%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELC------GSGQYFAMKAMDKG----------------- 705
++ + I+ LG G G V L C G+G+ A+K + +
Sbjct: 4 RYLKKIRVLGEGHFGKVSL--YCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILK 61
Query: 706 VMLNRNKTKTHVC----------LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVV 755
+ + N K C LI +Y P G L D P L + +A ++
Sbjct: 62 TLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSL---RDYLPKHKLNLAQLLLFAQQICE 118
Query: 756 ALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQ 815
+ YLH Q I+RDL NVLL + V + DF L+ +P +E R +
Sbjct: 119 GMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLA--------KAVPEGHEYYRVREDG 170
Query: 816 QNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 865
+PVF + A E + + A D W+ G+ LYE+L
Sbjct: 171 DSPVF----------------WYAVECLKENKFSYASDVWSFGVTLYELL 204
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 60.3 bits (146), Expect = 3e-09
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 25/114 (21%)
Query: 750 AAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 809
A +++ A++Y+H +GII+RD+K ENVL+ G + L DF +C
Sbjct: 266 ARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFA--------------- 310
Query: 810 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE 863
P GT + APE++AG +T +VD W+ G++++E
Sbjct: 311 --RGSWSTPFHYG--------IAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFE 354
|
Length = 461 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 4e-09
Identities = 58/266 (21%), Positives = 105/266 (39%), Gaps = 53/266 (19%)
Query: 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------LNRNK------- 712
+K LGSG G VHL + G A+K + +G M L+
Sbjct: 9 LKELGSGQFGVVHLGKWRGKID-VAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGV 67
Query: 713 -TKTH-VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 770
TK + ++T+Y G L L + L + + ++V A+EYL G I+RDL
Sbjct: 68 CTKQRPIFIVTEYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDL 126
Query: 771 KPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNS 830
N L+ + V ++DF L+ + +L +++ +G + PV
Sbjct: 127 AARNCLVGEDNVVKVSDFGLA-------RYVL---DDQYTSSQGTKFPV----------- 165
Query: 831 FVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLK 889
++ PE+ + +S D W+ G+L++E+ G P+ + + ++ +
Sbjct: 166 -----KWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESV-SAGYR 219
Query: 890 FPSSTPTSLHAKQLMYRLLHRDPKSR 915
+MY H P+ R
Sbjct: 220 LYRPKLAPTEVYTIMYSCWHEKPEDR 245
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 59.1 bits (143), Expect = 4e-09
Identities = 56/237 (23%), Positives = 93/237 (39%), Gaps = 67/237 (28%)
Query: 726 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSL 785
G +L LL +P L++ ++++ +++ L+Y+H G+++RDLKP N+L+ N + +
Sbjct: 93 GTDLHRLLTSRP---LEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKI 149
Query: 786 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEI-IA 844
DF L+ + PQ+ +V T Y APEI +
Sbjct: 150 CDFGLARIQD--PQM----------------------------TGYVSTRYYRAPEIMLT 179
Query: 845 GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANIL----------------HKDL 888
+ VD W+ G + EML G F GK F+ I L
Sbjct: 180 WQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTL 239
Query: 889 KFPSSTP-------------TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
+F S P A L+ ++L DP+ R+ + E HP+
Sbjct: 240 RFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEAL----AHPYLA 292
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 4e-09
Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 30/213 (14%)
Query: 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 776
+ ++ + PGG L L R+ L + + + +EYL + I+RDL N L
Sbjct: 67 IYIVMELVPGGSLLTFL-RKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCL 125
Query: 777 LQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEE 836
+ N + ++DF +S + + T + Q P+ +
Sbjct: 126 VGENNVLKISDFGMS-----REEEGGIYTVSDGLK----QIPI----------------K 160
Query: 837 YIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILHK-DLKFPSST 894
+ APE + +TS D W+ GILL+E G TP+ G + Q+T I + P
Sbjct: 161 WTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQLC 220
Query: 895 PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927
P ++ +LM + DP++R E NE++
Sbjct: 221 PEEIY--RLMLQCWAYDPENRPSFSEIYNELQI 251
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Score = 58.5 bits (142), Expect = 4e-09
Identities = 56/207 (27%), Positives = 79/207 (38%), Gaps = 50/207 (24%)
Query: 739 KVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797
V+ E+ + A V AL YL + II+RD+KP N+LL NG++ L DF +S
Sbjct: 102 SVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGIS------ 155
Query: 798 PQLLLPTTNEKKRRHKGQ-QNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVD 853
GQ + + A G Y+APE I G+ D
Sbjct: 156 ----------------GQLVDSI-------AKTRDAGCRPYMAPERIDPSARDGYDVRSD 192
Query: 854 WWALGILLYEMLYGYTPFRG------KTRQ--KTFANILHKDLKFPSSTPTSLHAKQLMY 905
W+LGI LYE+ G P+ + Q K IL + S +
Sbjct: 193 VWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSF----VNFIN 248
Query: 906 RLLHRDPKSRLGSHEGANEIKKHPFFK 932
L +D R E+ +HPF K
Sbjct: 249 LCLIKDESKR----PKYKELLEHPFIK 271
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 58.5 bits (142), Expect = 5e-09
Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 28/134 (20%)
Query: 733 LDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 792
+D P L ++ Y +++ + Y H +++RDLKP+N+L+ G + L DF L+
Sbjct: 88 MDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLA- 146
Query: 793 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS-A 851
R G P+R V T Y APEI+ G+ S
Sbjct: 147 ------------------RAFGV--------PVRTYTHEVVTLWYRAPEILLGSRQYSTP 180
Query: 852 VDWWALGILLYEML 865
VD W++G + EM+
Sbjct: 181 VDIWSIGCIFAEMV 194
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 5e-09
Identities = 65/276 (23%), Positives = 109/276 (39%), Gaps = 60/276 (21%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYF----AMKAMDKGVMLNRNKT------------K 714
F+ IK LGSG G+V+ G+ A+K + + NK
Sbjct: 9 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 68
Query: 715 THVC------------LITDYCPGGELFLLLD--RQPTKVLKEDAVRFYAAEVVVALEYL 760
HVC LIT P G LLD R+ + + + ++ + YL
Sbjct: 69 PHVCRLLGICLTSTVQLITQLMPFG---CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 125
Query: 761 HCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVF 820
+ +++RDL NVL++ HV +TDF L+ L +EK+ +G + P+
Sbjct: 126 EERRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---------GADEKEYHAEGGKVPI- 175
Query: 821 MAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE-MLYGYTPFRGKTRQKT 879
+++A E I +T D W+ G+ ++E M +G P+ G
Sbjct: 176 ---------------KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IPASE 219
Query: 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
++IL K + P ++ +M + D SR
Sbjct: 220 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSR 255
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 5e-09
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 29/168 (17%)
Query: 708 LNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIY 767
++R +T + L+ ++ +L LD+ P + + ++ +++ L++LH +++
Sbjct: 75 VSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVH 133
Query: 768 RDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRA 827
RDLKP+N+L+ +G + L DF L+ + S F A
Sbjct: 134 RDLKPQNILVTSSGQIKLADFGLARIYS------------------------FQM----A 165
Query: 828 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 875
S V T Y APE++ + + + VD W++G + EM FRG +
Sbjct: 166 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS 213
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
| >gnl|CDD|238075 cd00130, PAS, PAS domain; PAS motifs appear in archaea, eubacteria and eukarya | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 6e-09
Identities = 27/94 (28%), Positives = 55/94 (58%), Gaps = 8/94 (8%)
Query: 214 IMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQN----GQSYCGRLLN 269
I+YA+ ++ GY+ +E++G++ L PED ++RE L+N G+ +
Sbjct: 14 ILYANPAAEQLLGYSPEELIGKSLLDL----IHPEDREELRERLENLLSGGEPVTLEVRL 69
Query: 270 YKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEV 303
+KDG+ W L+++ PI+D+ G+V+ +G+ ++
Sbjct: 70 RRKDGSVIWVLVSLTPIRDEGGEVIGLLGVVRDI 103
|
Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in signal transduction. Length = 103 |
| >gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 6e-09
Identities = 62/235 (26%), Positives = 96/235 (40%), Gaps = 57/235 (24%)
Query: 721 TDYCPGGELFLLLDR----QPTKVLK----------EDAVRFYAAEVVVALEYLHCQGII 766
D GG+L+L+L+ T+++K E + + ++ L++LH II
Sbjct: 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRII 150
Query: 767 YRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMR 826
+RD+K N+LL G V L DF +S QL T+ + RR
Sbjct: 151 HRDVKGNNILLTTEGGVKLVDFGVSA------QL----TSTRLRR--------------- 185
Query: 827 ASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881
N+ VGT ++APE+IA + + D W+LGI E+ G P KT
Sbjct: 186 --NTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTL- 242
Query: 882 NILHKDLKFPSS-TPTSLHAKQLMYRLLHRDPKSRLGSHE---GANEIKKHPFFK 932
K P + PT LH ++ H + + E + +HPF K
Sbjct: 243 ------FKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291 |
| >gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Score = 57.7 bits (139), Expect = 7e-09
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 26/162 (16%)
Query: 710 RNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRD 769
R+ + + + ++ PGG + L + L E+ R Y +++ + YLH I++RD
Sbjct: 74 RDPMERTLSIFMEHMPGGSIKDQL--KSYGALTENVTRKYTRQILEGVSYLHSNMIVHRD 131
Query: 770 LKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASN 829
+K N+L G+V L DF S K Q M+
Sbjct: 132 IKGANILRDSVGNVKLGDFGAS---------------------KRLQTICLSGTGMK--- 167
Query: 830 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 871
S GT +++PE+I+G G+ D W++G + EML P+
Sbjct: 168 SVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPW 209
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265 |
| >gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 57.3 bits (138), Expect = 9e-09
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 26/162 (16%)
Query: 710 RNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRD 769
R+ + + + +Y PGG + L + L E+ R Y +++ + YLH I++RD
Sbjct: 74 RDPEEKKLSIFVEYMPGGSIKDQL--KAYGALTENVTRRYTRQILQGVSYLHSNMIVHRD 131
Query: 770 LKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASN 829
+K N+L G+V L DF S KR + M+
Sbjct: 132 IKGANILRDSAGNVKLGDFGAS-----------------KRIQT-----ICMSGT--GIK 167
Query: 830 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 871
S GT +++PE+I+G G+ D W++ + EML P+
Sbjct: 168 SVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPW 209
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 57.3 bits (138), Expect = 1e-08
Identities = 56/223 (25%), Positives = 90/223 (40%), Gaps = 48/223 (21%)
Query: 719 LITDYCPGGEL---FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 775
++ ++C GG + L L+R L E +R + + AL YLH II+RDLK N+
Sbjct: 79 ILIEFCAGGAVDAVMLELERP----LTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNI 134
Query: 776 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTE 835
L +G + L DF +S T +RR +SF+GT
Sbjct: 135 LFTLDGDIKLADFGVSA----------KNTRTIQRR-----------------DSFIGTP 167
Query: 836 EYIAPEII-----AGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD--- 887
++APE++ + D W+LGI L EM P + I +
Sbjct: 168 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPT 227
Query: 888 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930
L PS + K + + L ++ +R ++ +HPF
Sbjct: 228 LAQPSRWSSEF--KDFLKKCLEKNVDARW----TTTQLLQHPF 264
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 1e-08
Identities = 53/233 (22%), Positives = 95/233 (40%), Gaps = 69/233 (29%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELC-------GSGQYFAMKAMD------------------ 703
+H + I+ LG G+ GSV ELC +G+ A+K +
Sbjct: 4 RHLKFIQQLGKGNFGSV---ELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILK 60
Query: 704 ----------KGVMLNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRF--YAA 751
KGV + + L+ +Y P G L L + ++ D + YA+
Sbjct: 61 SLQHDNIVKYKGVCYSAGRRNLR--LVMEYLPYGSLRDYLQKHRERL---DHRKLLLYAS 115
Query: 752 EVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRR 811
++ +EYL + ++RDL N+L++ V + DF L+ +LP E +
Sbjct: 116 QICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLT--------KVLPQDKEYYKV 167
Query: 812 HKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 864
+ ++P+F + APE + + + A D W+ G++LYE+
Sbjct: 168 REPGESPIF----------------WYAPESLTESKFSVASDVWSFGVVLYEL 204
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 1e-08
Identities = 51/214 (23%), Positives = 89/214 (41%), Gaps = 32/214 (14%)
Query: 717 VCLITDYCPGGELFLLLD--RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 774
V LIT P G L LD R + + + ++ + YL + +++RDL N
Sbjct: 83 VQLITQLMPLGCL---LDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARN 139
Query: 775 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGT 834
VL++ HV +TDF L+ L +EK+ +G + P+
Sbjct: 140 VLVKTPQHVKITDFGLAKLLD---------VDEKEYHAEGGKVPI--------------- 175
Query: 835 EEYIAPEIIAGAGHTSAVDWWALGILLYE-MLYGYTPFRGKTRQKTFANILHKDLKFPSS 893
+++A E I +T D W+ G+ ++E M +G P+ G ++L K + P
Sbjct: 176 -KWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGI-PAVEIPDLLEKGERLPQP 233
Query: 894 TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927
++ ++ + D +SR E NE K
Sbjct: 234 PICTIDVYMVLVKCWMIDAESRPTFKELINEFSK 267
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 1e-08
Identities = 47/205 (22%), Positives = 81/205 (39%), Gaps = 39/205 (19%)
Query: 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 776
V +IT+ G L L +VL ++ A +V + YL Q I+RDL N+L
Sbjct: 77 VYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNIL 136
Query: 777 LQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAE----PMRASNSFV 832
+ + + DF L+ L + V+++ P +
Sbjct: 137 VGEDLVCKVADFGLARLI---------------------KEDVYLSSDKKIPYK------ 169
Query: 833 GTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILHK-DLKF 890
+ APE + ++ D W+ GILLYEM YG P+ G + + I +
Sbjct: 170 ----WTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPC 225
Query: 891 PSSTPTSLHAKQLMYRLLHRDPKSR 915
P+ P ++ ++M +P+ R
Sbjct: 226 PAKCPQEIY--KIMLECWAAEPEDR 248
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 57.5 bits (139), Expect = 1e-08
Identities = 35/122 (28%), Positives = 52/122 (42%), Gaps = 31/122 (25%)
Query: 756 ALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC-LTSC--KPQLLLPTTNEKKRRH 812
AL YLH +GII+RD+K EN+ L + L DF +C L + PQ
Sbjct: 197 ALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQ------------- 243
Query: 813 KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 872
+ GT E +PE++A + + D W+ G++L+EM
Sbjct: 244 ---------------CYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLF 288
Query: 873 GK 874
GK
Sbjct: 289 GK 290
|
Length = 392 |
| >gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 56.9 bits (137), Expect = 2e-08
Identities = 49/218 (22%), Positives = 87/218 (39%), Gaps = 60/218 (27%)
Query: 746 VRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 805
V+ + +++ L Y H + +++RDLKP+N+L+ G + L DF L+ S
Sbjct: 106 VKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSV--------- 156
Query: 806 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEM 864
P + ++ V T Y P+++ G+ +++ +D W +G + +EM
Sbjct: 157 ------------------PTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEM 198
Query: 865 LYGYTPFRGKTRQKTFANILH-------------------KDLKFPSSTPTSL--HAK-- 901
G F G T + I K+ FP P L HA
Sbjct: 199 ASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRL 258
Query: 902 -----QLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934
+L+ + L + K R+ A E KH +F+ +
Sbjct: 259 DTEGIELLTKFLQYESKKRI----SAEEAMKHAYFRSL 292
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 56.2 bits (136), Expect = 2e-08
Identities = 51/212 (24%), Positives = 87/212 (41%), Gaps = 53/212 (25%)
Query: 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRF--------YAAEVVVALEYLHCQGIIYRDL 770
++T+ P G L LDR L++DA+ YA ++ + YL + I+RDL
Sbjct: 72 MVTELAPLGSL---LDR-----LRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDL 123
Query: 771 KPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNS 830
N+LL + V + DF L + + + + V M E ++ +
Sbjct: 124 AARNILLASDDKVKIGDFGLM-----------------RALPQNEDHYV-MEEHLKVPFA 165
Query: 831 FVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILHK--- 886
+ APE + + A D W G+ L+EM YG P+ G + + IL K
Sbjct: 166 ------WCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSG----SQILKKIDK 215
Query: 887 ---DLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
L+ P + P ++ +M + +P R
Sbjct: 216 EGERLERPEACPQDIY--NVMLQCWAHNPADR 245
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|219844 pfam08447, PAS_3, PAS fold | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 2e-08
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 214 IMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQ-----NGQSYCGRLL 268
I+Y S F ++ GYT +E+ +L PED ++R LQ G+ Y G
Sbjct: 1 IIYWSPRFEEILGYTPEELKSSYEGWLDL--VHPEDRERVRRALQEFSLKKGEPYSGEYR 58
Query: 269 NYKKDGTPFWNLLTIAPIKDDEGKVLKFIG 298
+KDG W PI+D+ GK ++ IG
Sbjct: 59 IRRKDGEYRWVEARGRPIRDENGKPVRVIG 88
|
The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs. The PAS fold appears in archaea, eubacteria and eukarya. Length = 90 |
| >gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 56.5 bits (136), Expect = 2e-08
Identities = 54/224 (24%), Positives = 86/224 (38%), Gaps = 75/224 (33%)
Query: 746 VRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 805
VR + +++ L Y+H Q I++RDLKP+N+L+ G + L DF L+
Sbjct: 105 VRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLA-------------- 150
Query: 806 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEM 864
R K + P + +S V T Y P+++ GA ++SA+D W G + EM
Sbjct: 151 -----RAK--------SIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEM 197
Query: 865 LYGYTPFRGKTRQKTFANILHKDLK--------------------------FPSSTPTSL 898
L G F G +++ + K F P L
Sbjct: 198 LQGQPAFPG------VSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQL 251
Query: 899 H-----------AKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
A+ L ++L PK R+ A + HP+F
Sbjct: 252 RVVWKRLSRPPKAEDLASQMLMMFPKDRI----SAQDALLHPYF 291
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291 |
| >gnl|CDD|232884 TIGR00229, sensory_box, PAS domain S-box | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 2e-08
Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Query: 497 IIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY-TK 555
I++ + +F E+ YS EE++GRN L E +I ++ + + + K
Sbjct: 25 ILYVNPAFEEIFGYSAEELIGRNVLELIPEEDREEVRERIERRLEGEREPVSEERRVRRK 84
Query: 556 SGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591
G + W + P+R G +G+ D +E +
Sbjct: 85 DGSEIWVEVSVSPIRTN-GGELGVVGIVRDITERKQ 119
|
The PAS domain was previously described. This sensory box, or S-box domain occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include heme in the oxygen sensor FixL, FAD in the redox potential sensor NifL, and a 4-hydroxycinnamyl chromophore in photoactive yellow protein. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator [Regulatory functions, Small molecule interactions]. Length = 124 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 56.1 bits (135), Expect = 2e-08
Identities = 58/204 (28%), Positives = 84/204 (41%), Gaps = 35/204 (17%)
Query: 717 VCLITDYCPGGELFLLL---DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPE 773
V ++T+Y G L L D Q T + +R A+ ++YL G ++RDL
Sbjct: 80 VMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIAS----GMKYLSDMGYVHRDLAAR 135
Query: 774 NVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVG 833
N+L+ N ++DF LS + P+ T K P+R
Sbjct: 136 NILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--------------PIR------- 174
Query: 834 TEEYIAPEIIAGAGHTSAVDWWALGILLYE-MLYGYTPFRGKTRQKTFANILHK-DLKFP 891
+ APE IA TSA D W+ GI+++E M YG P+ + Q I L P
Sbjct: 175 ---WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLPAP 231
Query: 892 SSTPTSLHAKQLMYRLLHRDPKSR 915
P +LH QLM +D R
Sbjct: 232 MDCPAALH--QLMLDCWQKDRNER 253
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 56.1 bits (135), Expect = 3e-08
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 33/191 (17%)
Query: 730 FLLLDR---QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLT 786
FLL+ R +P + + VRF ++ +EYL + I+RDL N +L N V +
Sbjct: 97 FLLMSRIGEEPFTLPLQTLVRF-MIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVA 155
Query: 787 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA 846
DF LS KK ++ + R + +++A E +A
Sbjct: 156 DFGLS----------------KK---------IYSGDYYRQGCASKLPVKWLALESLADN 190
Query: 847 GHTSAVDWWALGILLYE-MLYGYTPFRGKTRQKTFANILHKD-LKFPSSTPTSLHAKQLM 904
+T+ D WA G+ ++E M G TP+ G + + ++ + LK P ++ +LM
Sbjct: 191 VYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQPPDCLEDVY--ELM 248
Query: 905 YRLLHRDPKSR 915
+ +PK R
Sbjct: 249 CQCWSPEPKCR 259
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 55.8 bits (134), Expect = 3e-08
Identities = 57/216 (26%), Positives = 92/216 (42%), Gaps = 32/216 (14%)
Query: 703 DKGVMLNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC 762
DK V L ++ + ++T+Y G L L + LK + AA+V + Y+
Sbjct: 61 DKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER 120
Query: 763 QGIIYRDLKPENVLLQGNGHV-SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFM 821
I+RDL+ N+L+ G+G V + DF L+ L NE R +G + P+
Sbjct: 121 MNYIHRDLRSANILV-GDGLVCKIADFGLARLIE---------DNEYTAR-QGAKFPI-- 167
Query: 822 AEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTF 880
++ APE T D W+ GILL E++ G P+ G ++
Sbjct: 168 --------------KWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVL 213
Query: 881 ANILHK-DLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+ + P P SLH +LM + +DP+ R
Sbjct: 214 EQVERGYRMPCPQDCPISLH--ELMLQCWKKDPEER 247
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 55.8 bits (134), Expect = 3e-08
Identities = 49/215 (22%), Positives = 86/215 (40%), Gaps = 60/215 (27%)
Query: 746 VRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 805
V+ + +++ L Y H + I++RDLKP+N+L+ G + L DF L+ S
Sbjct: 105 VKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSV--------- 155
Query: 806 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEM 864
P + ++ V T Y P+++ G+ +++ +D W +G +LYEM
Sbjct: 156 ------------------PTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEM 197
Query: 865 LYGYTPFRGKTRQKTF-------------------ANILHKDLKFPSSTPTSL--HAKQ- 902
G F G T ++ +N + FP L HA +
Sbjct: 198 ATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRL 257
Query: 903 ------LMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
L+ LL + KSR+ + +H +F
Sbjct: 258 DTDGIDLLSSLLLYETKSRISAEAAL----RHSYF 288
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Score = 55.8 bits (134), Expect = 3e-08
Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 41/199 (20%)
Query: 712 KTKTHVCLITDYCPGGELFLLLD--RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRD 769
K + L+ + C GG + L+ + + ++E + + E ++ L++LH I+RD
Sbjct: 90 KNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRD 149
Query: 770 LKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASN 829
+K N+LL G V L DF +S QL T+ + RR N
Sbjct: 150 VKGNNILLTTEGGVKLVDFGVSA------QL----TSTRLRR-----------------N 182
Query: 830 SFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANIL 884
+ VGT ++APE+IA + + + D W+LGI E+ G P +
Sbjct: 183 TSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRAL---- 238
Query: 885 HKDLKFPSSTPTSLHAKQL 903
K P + P +LH +L
Sbjct: 239 ---FKIPRNPPPTLHQPEL 254
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286 |
| >gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 55.9 bits (134), Expect = 3e-08
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 30/162 (18%)
Query: 713 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKP 772
TK + L+ +Y +L +D+ P L + V+ + +++ L Y+H + I++RDLKP
Sbjct: 74 TKETLTLVFEYV-HTDLCQYMDKHPGG-LHPENVKLFLFQLLRGLSYIHQRYILHRDLKP 131
Query: 773 ENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFV 832
+N+L+ G + L DF L+ S P ++ V
Sbjct: 132 QNLLISDTGELKLADFGLARAKSV---------------------------PSHTYSNEV 164
Query: 833 GTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRG 873
T Y P+++ G+ +++ +D W +G + EM+ G F G
Sbjct: 165 VTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPG 206
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 56.2 bits (135), Expect = 4e-08
Identities = 59/226 (26%), Positives = 94/226 (41%), Gaps = 57/226 (25%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMD---KGVMLN---RNKTKTHVC------ 718
F I LG+G+ G V V+ SG A K + K + N R H C
Sbjct: 7 FERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 66
Query: 719 -------------LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-G 764
+ ++ GG L +L + K + E+ + + V+ L YL +
Sbjct: 67 GFYGAFYSDGEISICMEHMDGGSLDQVL--KEAKRIPEEILGKVSIAVLRGLAYLREKHQ 124
Query: 765 IIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEP 824
I++RD+KP N+L+ G + L DF +S GQ + +
Sbjct: 125 IMHRDVKPSNILVNSRGEIKLCDFGVS----------------------GQ-----LIDS 157
Query: 825 MRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 870
M +NSFVGT Y++PE + G ++ D W++G+ L E+ G P
Sbjct: 158 M--ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYP 201
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 54.7 bits (132), Expect = 6e-08
Identities = 44/201 (21%), Positives = 76/201 (37%), Gaps = 32/201 (15%)
Query: 718 CLITDYCPGGELF-LLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 776
L+ + P G L L R+ V ++ A +V + + YL + ++RDL NVL
Sbjct: 71 MLVMELAPLGPLLKYLKKRREIPVSD---LKELAHQVAMGMAYLESKHFVHRDLAARNVL 127
Query: 777 LQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEE 836
L ++DF +S L ++ R + P+ +
Sbjct: 128 LVNRHQAKISDFGMS--------RALGAGSDYYRATTAGRWPL----------------K 163
Query: 837 YIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILH-KDLKFPSST 894
+ APE I +S D W+ G+ L+E YG P+ + A + + L P
Sbjct: 164 WYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRPEEC 223
Query: 895 PTSLHAKQLMYRLLHRDPKSR 915
P ++ +M P+ R
Sbjct: 224 PQEIY--SIMLSCWKYRPEDR 242
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 6e-08
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 33/170 (19%)
Query: 750 AAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 809
A +V + YL + ++RDL N L+ N V + DF LS
Sbjct: 136 AKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLS------------------ 177
Query: 810 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGY 868
+N ++ A+ +AS + ++ PE I +T+ D WA G++L+E+ YG
Sbjct: 178 ------RN-IYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGM 230
Query: 869 TPFRGKTRQKTFANILHKD---LKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
P+ G ++ + +D L P + P L+ LM + P R
Sbjct: 231 QPYYGMAHEEVIYYV--RDGNVLSCPDNCPLELYN--LMRLCWSKLPSDR 276
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 9e-08
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 710 RNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRD 769
+ T+ + I +L +L++ P L E+ R + +++ L+Y+H +++RD
Sbjct: 83 GSLTELNSVYIVQEYMETDLANVLEQGP---LSEEHARLFMYQLLRGLKYIHSANVLHRD 139
Query: 770 LKPENVLLQGNGHV-SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRAS 828
LKP NV + V + DF L+ + + HKG +++E +
Sbjct: 140 LKPANVFINTEDLVLKIGDFGLARIV------------DPHYSHKG-----YLSEGLV-- 180
Query: 829 NSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRG 873
T+ Y +P ++ + T A+D WA G + EML G F G
Sbjct: 181 -----TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAG 221
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342 |
| >gnl|CDD|197509 smart00086, PAC, Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) | Back alignment and domain information |
|---|
Score = 48.7 bits (117), Expect = 1e-07
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 547 TVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSE 588
TV+ K G W L P+RD+ GEV+ +GV D +E
Sbjct: 1 TVEYRLRRKDGSYIWVLVSASPIRDEDGEVEGILGVVRDITE 42
|
PAC motif occurs C-terminal to a subset of all known PAS motifs. It is proposed to contribute to the PAS domain fold. Length = 43 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 1e-07
Identities = 48/199 (24%), Positives = 76/199 (38%), Gaps = 30/199 (15%)
Query: 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ 778
++T+ G L L + LK + AA+V + YL Q I+RDL NVL+
Sbjct: 78 IVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVG 137
Query: 779 GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYI 838
N + DF L+ + + + R G + P+ ++
Sbjct: 138 ENNICKVADFGLARVIK---------EDIYEARE-GAKFPI----------------KWT 171
Query: 839 APEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILHK-DLKFPSSTPT 896
APE + D W+ GILL E++ YG P+ G T + + + P P
Sbjct: 172 APEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCPPGCPK 231
Query: 897 SLHAKQLMYRLLHRDPKSR 915
L+ +M DP R
Sbjct: 232 ELY--DIMLDCWKEDPDDR 248
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 1e-07
Identities = 72/315 (22%), Positives = 117/315 (37%), Gaps = 85/315 (26%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAM-----DKGV---------MLNRNKTKTH 716
+ I+ +G G G V+ +GQ AMK + ++GV +L +
Sbjct: 2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNI 61
Query: 717 VCLITDYCPGGELFLL-----------LDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQG 764
VCL L+L+ LD P + + + V+ Y +++ + + H +
Sbjct: 62 VCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR 121
Query: 765 IIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEP 824
+++RDLKP+N+L+ G + L DF L+ R G P
Sbjct: 122 VLHRDLKPQNLLIDNKGVIKLADFGLA-------------------RAFGI--------P 154
Query: 825 MRASNSFVGTEEYIAPEIIAGAGHTSA-VDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883
+R V T Y APE++ G+ S VD W++G + EM F G + I
Sbjct: 155 VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRI 214
Query: 884 LH----------------KDLK--FPSSTPTSLHAK---------QLMYRLLHRDPKSRL 916
D K FP SL + L+ ++L DP R+
Sbjct: 215 FRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRI 274
Query: 917 GSHEGANEIKKHPFF 931
A + HP+F
Sbjct: 275 ----SAKKALNHPYF 285
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Score = 53.9 bits (129), Expect = 2e-07
Identities = 52/206 (25%), Positives = 81/206 (39%), Gaps = 38/206 (18%)
Query: 719 LITDYCPGGELFLL-LDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL 777
L+ +YC G LL + ++P + ++ A+ A + L YLH +I+RD+K N+LL
Sbjct: 98 LVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQ---GLAYLHSHNMIHRDIKAGNILL 154
Query: 778 QGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEY 837
G V L DF + +S +NSFVGT +
Sbjct: 155 TEPGQVKLADFGSASKSS-------------------------------PANSFVGTPYW 183
Query: 838 IAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSST 894
+APE+I + VD W+LGI E+ P +I D S
Sbjct: 184 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSN 243
Query: 895 PTSLHAKQLMYRLLHRDPKSRLGSHE 920
+ + + L + P+ R S E
Sbjct: 244 EWTDSFRGFVDYCLQKIPQERPASAE 269
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 2e-07
Identities = 50/205 (24%), Positives = 86/205 (41%), Gaps = 36/205 (17%)
Query: 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 776
+ +IT+YC G+L L R+ L + + ++ +V + +L + I+RDL NVL
Sbjct: 114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVL 173
Query: 777 LQGNGHVS-LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTE 835
L +G + + DF L+ R N V N+ +
Sbjct: 174 LT-HGKIVKICDFGLA------------------RDIMNDSNYVV------KGNARLPV- 207
Query: 836 EYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILHKDLKFPSST 894
+++APE I +T D W+ GILL+E+ G P+ G F ++ + + +
Sbjct: 208 KWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRM--AQ 265
Query: 895 PTSLHAKQLMYRLLHR----DPKSR 915
P HA +Y ++ DP R
Sbjct: 266 PE--HAPAEIYDIMKTCWDADPLKR 288
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 53.9 bits (129), Expect = 2e-07
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 36/149 (24%)
Query: 753 VVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRR 811
V+ L YL + I++RD+KP N+L+ G + L DF +S
Sbjct: 112 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS-------------------- 151
Query: 812 HKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 871
GQ + + M +NSFVGT Y++PE + G ++ D W++G+ L EM G P
Sbjct: 152 --GQ-----LIDSM--ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPI 202
Query: 872 ---RGKTRQKTFANILHKDLKFPSSTPTS 897
K + F + D P+ + TS
Sbjct: 203 PPPDAKELELMFGCPVEGD---PAESETS 228
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 2e-07
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 26/116 (22%)
Query: 753 VVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRH 812
V+ A++YLH II+RD+K EN+ + G V L DF +C P + +
Sbjct: 191 VLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAAC---------FPVDINANKYY 241
Query: 813 KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGY 868
+ GT APE++A + AVD W+ GI+L+EM +
Sbjct: 242 -----------------GWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCH 280
|
Length = 391 |
| >gnl|CDD|225112 COG2202, AtoS, FOG: PAS/PAC domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 52.9 bits (125), Expect = 2e-07
Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 7/119 (5%)
Query: 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPAT 532
L LE + D D I++A+ + EL YS EE LGR L PE +
Sbjct: 113 RLRALLEASPDGIWVLDE---DGRILYANPAAEELLGYSPEEELGRGLSDLIHPEDEERR 169
Query: 533 VRK--IRAAIDNQTDVTVQLINYTKSGKK-FWNLFHLQPMRDQKGEVQYFIGVQLDGSE 588
+ A + ++ K G++ W L + P+RD GE+ +G+ D +E
Sbjct: 170 ELELARALAEGRGGPLEIEYRVRRKDGERVRWILSRISPVRDD-GEIVGVVGIARDITE 227
|
Length = 232 |
| >gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 2e-07
Identities = 53/248 (21%), Positives = 92/248 (37%), Gaps = 58/248 (23%)
Query: 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ 778
+++ G LL + L E A+ F +V+ AL+Y+H +G I+R +K ++LL
Sbjct: 76 VVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLS 135
Query: 779 GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYI 838
G+G V L+ S KR+ P + + ++
Sbjct: 136 GDGKVVLSGLRYSV----------SMIKHGKRQRVVHDFPKSSVKNL----------PWL 175
Query: 839 APEIIAG--AGHTSAVDWWALGILLYEMLYGYTPF-------------RGKTR----QKT 879
+PE++ G+ D +++GI E+ G+ PF RG + T
Sbjct: 176 SPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKST 235
Query: 880 F----ANILHKDLKFPSSTPT-----------SLHAKQLMYRLLHRDPKSRLGSHEGANE 924
+ ++ S H Q + L RDP+SR A++
Sbjct: 236 YPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESR----PSASQ 291
Query: 925 IKKHPFFK 932
+ H FFK
Sbjct: 292 LLNHSFFK 299
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 53.4 bits (129), Expect = 2e-07
Identities = 50/207 (24%), Positives = 77/207 (37%), Gaps = 62/207 (29%)
Query: 756 ALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQ 815
+ +LH I++RDLK N+LL G + + DF L+ R +
Sbjct: 118 GVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLA------------------REY--- 156
Query: 816 QNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGK 874
P++ V T Y APE++ GA ++A+D W++G + E+L F GK
Sbjct: 157 ------GSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGK 210
Query: 875 ----TRQKTF--------------ANILH-KDLKFPSSTPTSLHAK-----------QLM 904
K F + + K F L K L+
Sbjct: 211 SEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLL 270
Query: 905 YRLLHRDPKSRLGSHEGANEIKKHPFF 931
RLL DP R+ + + KHP+F
Sbjct: 271 NRLLTYDPAKRISAEDAL----KHPYF 293
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Score = 53.3 bits (128), Expect = 2e-07
Identities = 46/225 (20%), Positives = 84/225 (37%), Gaps = 59/225 (26%)
Query: 735 RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHV-SLTDFDLSCL 793
R P + L ++ + +++ + + H G+++RDLKP+N+L+ + + D L
Sbjct: 101 RGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRA 160
Query: 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAV 852
S P+++ + T Y APE++ G+ H ++ V
Sbjct: 161 FSI---------------------------PVKSYTHEIVTLWYRAPEVLLGSTHYSTPV 193
Query: 853 DWWALGILLYEMLYGYTPFRGKTRQKTFANILH-------------KDLK----FPSSTP 895
D W++G + EM F G + + +I L+ FP P
Sbjct: 194 DIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKP 253
Query: 896 TSL---------HAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
L L+ ++L DP R+ A HP+F
Sbjct: 254 QDLSRAVPDLSPEGLDLLQKMLRYDPAKRI----SAKAALTHPYF 294
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295 |
| >gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 54.3 bits (130), Expect = 2e-07
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 26/114 (22%)
Query: 752 EVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRR 811
+++ A+EY+H + +I+RD+K EN+ L +G + L DF + +P E++
Sbjct: 275 QLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFGTA----------MPFEKEREAF 324
Query: 812 HKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 865
G +VGT +PEI+AG G+ D W+ G++L +ML
Sbjct: 325 DYG----------------WVGTVATNSPEILAGDGYCEITDIWSCGLILLDML 362
|
Length = 501 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 2e-07
Identities = 58/210 (27%), Positives = 89/210 (42%), Gaps = 45/210 (21%)
Query: 717 VCLITDYCPGGEL--FLLL-DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPE 773
V +IT++ G L FL D Q T + +R AA ++YL ++RDL
Sbjct: 80 VMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAA----GMKYLSEMNYVHRDLAAR 135
Query: 774 NVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAE-----PMRAS 828
N+L+ N ++DF LS + +P + + P+R
Sbjct: 136 NILVNSNLVCKVSDFGLS-----------------RFLEDDTSDPTYTSSLGGKIPIR-- 176
Query: 829 NSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE-MLYGYTPFRGKTRQKTFANILHKD 887
+ APE IA TSA D W+ GI+++E M YG P+ + Q N + +D
Sbjct: 177 --------WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-NAIEQD 227
Query: 888 LKFPS--STPTSLHAKQLMYRLLHRDPKSR 915
+ P PT+LH QLM +D +R
Sbjct: 228 YRLPPPMDCPTALH--QLMLDCWQKDRNAR 255
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 2e-07
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 49/211 (23%)
Query: 719 LITDYCPGGEL--FLLLDR---QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPE 773
+I + G+L FLL R P K+ + ++F ++ + +EYL + I+RDL
Sbjct: 84 VILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKF-MVDIALGMEYLSNRNFIHRDLAAR 142
Query: 774 NVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK-------RRHKGQQNPVFMAEPMR 826
N +L+ + V + DF LS KK R+ + + PV
Sbjct: 143 NCMLREDMTVCVADFGLS----------------KKIYSGDYYRQGRIAKMPV------- 179
Query: 827 ASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILH 885
++IA E +A +TS D WA G+ ++E+ G TP+ G + + + H
Sbjct: 180 ---------KWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRH 230
Query: 886 KD-LKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+ LK P L+ LMY DPK R
Sbjct: 231 GNRLKQPEDCLDELYD--LMYSCWRADPKDR 259
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|131984 TIGR02938, nifL_nitrog, nitrogen fixation negative regulator NifL | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 3e-07
Identities = 26/92 (28%), Positives = 51/92 (55%)
Query: 497 IIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKS 556
I++A+D+F +T Y++EEI+G+N L T P + + ++ Q +L+N K
Sbjct: 26 ILYANDAFTRITGYTKEEIIGKNESVLSNHTTPPEVYQALWGSLAEQKPWAGKLLNRRKD 85
Query: 557 GKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSE 588
G+ + + P+ ++ GE +F+G+ D +E
Sbjct: 86 GELYLAELTVAPVLNEAGETTHFLGMHRDITE 117
|
NifL is a modulator of the nitrogen fixation positive regulator protein NifA, and is therefore a negative regulator. It binds NifA. NifA and NifL are encoded by adjacent genes [Central intermediary metabolism, Nitrogen fixation, Regulatory functions, Protein interactions]. Length = 494 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 3e-07
Identities = 47/215 (21%), Positives = 83/215 (38%), Gaps = 60/215 (27%)
Query: 746 VRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 805
V+ + +++ L + H +++RDLKP+N+L+ NG + L DF L+
Sbjct: 101 VKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLA-------------- 146
Query: 806 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEM 864
R G P+R ++ V T Y P+++ GA +++++D W+ G + E+
Sbjct: 147 -----RAFGI--------PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 193
Query: 865 LYGYTP-FRGKTRQKTFANI-----------------LHKDLKFPSSTPTSLHA------ 900
P F G I L +P T+
Sbjct: 194 ANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKL 253
Query: 901 ----KQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
+ L+ LL +P R+ A E +HP+F
Sbjct: 254 NSTGRDLLQNLLVCNPVQRI----SAEEALQHPYF 284
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 52.3 bits (125), Expect = 3e-07
Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 42/226 (18%)
Query: 699 MKAM--DKGVMLNRNKTKTHVCLITDYCPGGELFLLL-----DRQPTKVLKEDAVRFYAA 751
MK + DK V L+ TK + +IT++ G L L +QP L + ++A
Sbjct: 55 MKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID-----FSA 109
Query: 752 EVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRR 811
++ + ++ + I+RDL+ N+L+ + + DF L+ + NE R
Sbjct: 110 QIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIE---------DNEYTAR 160
Query: 812 HKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTP 870
+G + P+ ++ APE I T D W+ GILL E++ YG P
Sbjct: 161 -EGAKFPI----------------KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 203
Query: 871 FRGKTRQKTFANILHK-DLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+ G + + + + P + P L+ +M R P+ R
Sbjct: 204 YPGMSNPEVIRALERGYRMPRPENCPEELY--NIMMRCWKNRPEER 247
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 4e-07
Identities = 51/201 (25%), Positives = 78/201 (38%), Gaps = 38/201 (18%)
Query: 719 LITDYCPGGELFLL-LDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL 777
L+ +YC G LL + ++P + ++ AV A + L YLH +I+RD+K N+LL
Sbjct: 92 LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQ---GLAYLHSHNMIHRDVKAGNILL 148
Query: 778 QGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEY 837
G V L DF A M +N FVGT +
Sbjct: 149 SEPGLVKLGDFG-------------------------------SASIMAPANXFVGTPYW 177
Query: 838 IAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSST 894
+APE+I + VD W+LGI E+ P +I + S
Sbjct: 178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSG 237
Query: 895 PTSLHAKQLMYRLLHRDPKSR 915
S + + + L + P+ R
Sbjct: 238 HWSEYFRNFVDSCLQKIPQDR 258
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 52.2 bits (125), Expect = 4e-07
Identities = 62/267 (23%), Positives = 103/267 (38%), Gaps = 55/267 (20%)
Query: 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM----------------------LNRN 711
+K LG+G G V + A+K++ +G M L
Sbjct: 11 VKKLGAGQFGEVWM-GYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAV 69
Query: 712 KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLK 771
T+ + +IT+Y G L L L + + AA++ + ++ + I+RDL+
Sbjct: 70 VTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLR 129
Query: 772 PENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSF 831
N+L+ + DF L+ L NE R +G + P+
Sbjct: 130 AANILVSETLCCKIADFGLARLIE---------DNEYTAR-EGAKFPI------------ 167
Query: 832 VGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILHKDLKF 890
++ APE I T D W+ GILL E++ YG P+ G T + N L + +
Sbjct: 168 ----KWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQN-LERGYRM 222
Query: 891 --PSSTPTSLHAKQLMYRLLHRDPKSR 915
P + P L+ +LM P+ R
Sbjct: 223 PRPDNCPEELY--ELMRLCWKEKPEER 247
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 52.2 bits (125), Expect = 4e-07
Identities = 66/276 (23%), Positives = 114/276 (41%), Gaps = 57/276 (20%)
Query: 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQY-FAMKAMDKGVMLNRNKTK--------TH 716
IN +K LGSG G VHL + Q A+KA+++G M + + +H
Sbjct: 1 INPSELTFMKELGSGQFGVVHLGKW--RAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSH 58
Query: 717 --------VC-------LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH 761
VC ++T++ G L L RQ L +D + +V +EYL
Sbjct: 59 PKLVQLYGVCTQQKPLYIVTEFMENGCLLNYL-RQRQGKLSKDMLLSMCQDVCEGMEYLE 117
Query: 762 CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFM 821
I+RDL N L+ G V ++DF ++ + +L +++ G + PV
Sbjct: 118 RNSFIHRDLAARNCLVSSTGVVKVSDFGMT-------RYVL---DDEYTSSSGAKFPV-- 165
Query: 822 AEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTF 880
++ PE+ + ++S D W+ G+L++E+ G PF K+ +
Sbjct: 166 --------------KWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVV 211
Query: 881 ANILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
I L P +++ ++MY H P+ R
Sbjct: 212 EMISRGFRLYRPKLASMTVY--EVMYSCWHEKPEGR 245
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 5e-07
Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 31/134 (23%)
Query: 741 LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800
L ++ V+F +++ L+Y+H GII+RDLKP NV + + + + DF L+
Sbjct: 115 LSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQAD----- 169
Query: 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGI 859
+ M +V T Y APEI+ H VD W++G
Sbjct: 170 ----------------------DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 204
Query: 860 LLYEMLYGYTPFRG 873
++ E+L G F G
Sbjct: 205 IMAELLKGKALFPG 218
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343 |
| >gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Score = 52.4 bits (125), Expect = 5e-07
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 30/159 (18%)
Query: 734 DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN----GHVSLTDFD 789
+++P + L V+ +++ + YLH +++RDLKP N+L+ G G V + D
Sbjct: 99 NKKPMQ-LPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG 157
Query: 790 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH- 848
+ L + +P+ +P+ + V T Y APE++ GA H
Sbjct: 158 FARLFN---------------------SPL---KPLADLDPVVVTFWYRAPELLLGARHY 193
Query: 849 TSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 887
T A+D WA+G + E+L F + +N H D
Sbjct: 194 TKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHD 232
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 6e-07
Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 31/199 (15%)
Query: 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ 778
++ + P GEL L L ++ Y+ ++ AL YL + ++RD+ NVL+
Sbjct: 83 IVMELAPLGELRSYLQVNKYS-LDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVS 141
Query: 779 GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYI 838
V L DF LS + L + K + K P++ ++
Sbjct: 142 SPDCVKLGDFGLS-------RYLEDESYYKASKGK---------LPIK----------WM 175
Query: 839 APEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILHKD-LKFPSSTPT 896
APE I TSA D W G+ ++E+L G PF+G I + + L P + P
Sbjct: 176 APESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPMPPNCPP 235
Query: 897 SLHAKQLMYRLLHRDPKSR 915
+L++ LM + DP R
Sbjct: 236 TLYS--LMTKCWAYDPSKR 252
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 6e-07
Identities = 63/301 (20%), Positives = 104/301 (34%), Gaps = 81/301 (26%)
Query: 665 QINLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDK--------------- 704
+I L R ++ LG G G V+ EL G S A+K + +
Sbjct: 1 EIPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAE 60
Query: 705 --------------GVMLNRNKTKTHVCLITDYCPGGEL--FLLL------------DRQ 736
GV + C++ +Y G+L FL+ D
Sbjct: 61 LMSDLQHPNIVCLLGVCTK----EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDET 116
Query: 737 PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796
L A ++ +EYL ++RDL N L+ V ++DF LS
Sbjct: 117 VKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRD--- 173
Query: 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWA 856
++ A+ R + + ++ PE I T+ D W+
Sbjct: 174 ----------------------IYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWS 211
Query: 857 LGILLYEML-YGYTPFRGKTRQKTFANILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKS 914
G++L+E+ YG P+ G + Q+ I + L P P ++A LM + P
Sbjct: 212 FGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLLPCPEDCPARVYA--LMIECWNEIPAR 269
Query: 915 R 915
R
Sbjct: 270 R 270
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Score = 52.0 bits (124), Expect = 6e-07
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 30/159 (18%)
Query: 734 DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN----GHVSLTDFD 789
+++P + L V+ +++ + YLH +++RDLKP N+L+ G G V + D
Sbjct: 99 NKKPVQ-LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG 157
Query: 790 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH- 848
+ L + +P+ +P+ + V T Y APE++ GA H
Sbjct: 158 FARLFN---------------------SPL---KPLADLDPVVVTFWYRAPELLLGARHY 193
Query: 849 TSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 887
T A+D WA+G + E+L F + +N H D
Sbjct: 194 TKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHD 232
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 51.2 bits (123), Expect = 7e-07
Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 30/199 (15%)
Query: 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ 778
++T+Y G L L K L+ + AA++ + YL + I+RDL N+L+
Sbjct: 78 IVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVG 137
Query: 779 GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYI 838
N + DF L+ L +E R G + P+ ++
Sbjct: 138 ENLVCKIADFGLARLIE---------DDEYTARE-GAKFPI----------------KWT 171
Query: 839 APEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANI-LHKDLKFPSSTPT 896
APE T D W+ GILL E++ YG P+ G T ++ + + P + P
Sbjct: 172 APEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRPPNCPE 231
Query: 897 SLHAKQLMYRLLHRDPKSR 915
L+ LM + +DP+ R
Sbjct: 232 ELY--DLMLQCWDKDPEER 248
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 51.2 bits (122), Expect = 8e-07
Identities = 48/201 (23%), Positives = 82/201 (40%), Gaps = 30/201 (14%)
Query: 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 776
+ ++T+Y G L L + K L+ + AA++ + Y+ ++RDL+ N+L
Sbjct: 75 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 134
Query: 777 LQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEE 836
+ N + DF L+ L NE R +G + P+ +
Sbjct: 135 VGENLVCKVADFGLARLIE---------DNEYTAR-QGAKFPI----------------K 168
Query: 837 YIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHK-DLKFPSST 894
+ APE T D W+ GILL E+ G P+ G ++ + + P
Sbjct: 169 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 228
Query: 895 PTSLHAKQLMYRLLHRDPKSR 915
P SLH LM + ++P+ R
Sbjct: 229 PESLH--DLMCQCWRKEPEER 247
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 8e-07
Identities = 48/208 (23%), Positives = 76/208 (36%), Gaps = 44/208 (21%)
Query: 752 EVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRR 811
+++ L LH ++RDL P N+ + G + DF L+ P T ++ +
Sbjct: 127 QILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPP--YSDTLSKDET- 183
Query: 812 HKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTP 870
+ S V T Y APE++ GA + AVD W++G + E+L G
Sbjct: 184 ----------MQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPL 233
Query: 871 FRGKTRQKTFANILH-----------KDLKFPSSTPTSLHAKQ---------------LM 904
F G+ I + K P T + + L+
Sbjct: 234 FPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLL 293
Query: 905 YRLLHRDPKSRLGSHEGANEIKKHPFFK 932
LL +P R+ A E KH +FK
Sbjct: 294 QSLLKLNPLERI----SAKEALKHEYFK 317
|
Length = 335 |
| >gnl|CDD|216228 pfam00989, PAS, PAS fold | Back alignment and domain information |
|---|
Score = 47.8 bits (114), Expect = 1e-06
Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 214 IMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYK-K 272
I+Y +A ++ G + +EV+G++ L D E +R+ L G+ G ++++
Sbjct: 23 ILYVNAAAEELLGLSREEVIGKSLLDLIPEDDDAEVAELLRQALLQGEESRGFEVSFRVP 82
Query: 273 DGTPFWNLLTIAPIKDDEGKVLKFIGM 299
DG P + +P++D G+V F+G+
Sbjct: 83 DGRPRHVEVRASPVRDAGGEVRGFLGV 109
|
The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs. The PAS fold appears in archaea, eubacteria and eukarya. Length = 113 |
| >gnl|CDD|225112 COG2202, AtoS, FOG: PAS/PAC domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 49.5 bits (116), Expect = 2e-06
Identities = 19/97 (19%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Query: 210 PDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQ--NGQSYCGRL 267
D I+YA+ ++ GY+ +E +GR L + ++ L G
Sbjct: 130 EDGRILYANPAAEELLGYSPEEELGRGLSDLIHPEDEERRELELARALAEGRGGPLEIEY 189
Query: 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304
+KDG +L+ D+G+++ +G+ +++
Sbjct: 190 RVRRKDGERVRWILSRISPVRDDGEIVGVVGIARDIT 226
|
Length = 232 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 2e-06
Identities = 60/236 (25%), Positives = 96/236 (40%), Gaps = 53/236 (22%)
Query: 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------LNRNKTKTH 716
+I + + +K LG+G G V + S + A+K + G M N KT H
Sbjct: 2 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQAFLEEANLMKTLQH 60
Query: 717 ---------------VCLITDYCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYL 760
+ +IT+Y G L L KVL + F +A++ + Y+
Sbjct: 61 DKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDF-SAQIAEGMAYI 119
Query: 761 HCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVF 820
+ I+RDL+ NVL+ + + DF L+ + NE R +G + P+
Sbjct: 120 ERKNYIHRDLRAANVLVSESLMCKIADFGLARVIE---------DNEYTAR-EGAKFPI- 168
Query: 821 MAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKT 875
++ APE I T D W+ GILLYE++ YG P+ G +
Sbjct: 169 ---------------KWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMS 209
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 2e-06
Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 43/209 (20%)
Query: 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVV-------VALEYLHCQGIIYR 768
+IT+Y G L K L++ F + ++V ++YL ++R
Sbjct: 80 PAMIITEYMENGAL--------DKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHR 131
Query: 769 DLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRAS 828
DL N+L+ N ++DF LS + P+ T+ K P+R
Sbjct: 132 DLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKI--------------PIR-- 175
Query: 829 NSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE-MLYGYTPFRGKTRQKTFANILHK- 886
+ APE IA TSA D W+ GI+++E M +G P+ + + I
Sbjct: 176 --------WTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGF 227
Query: 887 DLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
L P P++++ QLM + +D R
Sbjct: 228 RLPAPMDCPSAVY--QLMLQCWQQDRARR 254
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|216228 pfam00989, PAS, PAS fold | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 3e-06
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Query: 497 IIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY-TK 555
I++ + + EL SREE++G++ L + D +R A+ + +++
Sbjct: 23 ILYVNAAAEELLGLSREEVIGKSLLDLIPEDDDAEVAELLRQALLQGEESRGFEVSFRVP 82
Query: 556 SGKKFWNLFHLQPMRDQKGEVQYFIGVQLD 585
G+ P+RD GEV+ F+GV D
Sbjct: 83 DGRPRHVEVRASPVRDAGGEVRGFLGVLRD 112
|
The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs. The PAS fold appears in archaea, eubacteria and eukarya. Length = 113 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 3e-06
Identities = 47/211 (22%), Positives = 78/211 (36%), Gaps = 39/211 (18%)
Query: 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ 778
LI ++ P G L L R K+ + ++ YA ++ ++YL + ++RDL NVL++
Sbjct: 85 LIMEFLPSGSLKEYLPRNKNKINLKQQLK-YAVQICKGMDYLGSRQYVHRDLAARNVLVE 143
Query: 779 GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYI 838
V + DF L+ + T E +PVF +
Sbjct: 144 SEHQVKIGDFGLT--------KAIETDKEYYTVKDDLDSPVF----------------WY 179
Query: 839 APEIIAGAGHTSAVDWWALGILLYEMLY----GYTPF----------RGKTRQKTFANIL 884
APE + + A D W+ G+ LYE+L +P G+ +L
Sbjct: 180 APECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVL 239
Query: 885 HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+ + P QLM + P R
Sbjct: 240 EEGKRLPRPPNCPEEVYQLMRKCWEFQPSKR 270
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|232884 TIGR00229, sensory_box, PAS domain S-box | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 4e-06
Identities = 22/94 (23%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 214 IMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYK-K 272
I+Y + F ++ GY+++E++GRN L E +I L+ + + K
Sbjct: 25 ILYVNPAFEEIFGYSAEELIGRNVLELIPEEDREEVRERIERRLEGEREPVSEERRVRRK 84
Query: 273 DGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKH 306
DG+ W ++++PI G L +G+ ++++
Sbjct: 85 DGSEIWVEVSVSPI-RTNGGELGVVGIVRDITER 117
|
The PAS domain was previously described. This sensory box, or S-box domain occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include heme in the oxygen sensor FixL, FAD in the redox potential sensor NifL, and a 4-hydroxycinnamyl chromophore in photoactive yellow protein. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator [Regulatory functions, Small molecule interactions]. Length = 124 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 4e-06
Identities = 35/160 (21%), Positives = 64/160 (40%), Gaps = 31/160 (19%)
Query: 713 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKP 772
+ ++T+Y G L L + V+ +A +V +EYL + ++RDL
Sbjct: 71 QGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAA 130
Query: 773 ENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFV 832
NVL+ + ++DF L+ E + + PV
Sbjct: 131 RNVLVSEDLVAKVSDFGLA--------------KEASQGQDSGKLPV------------- 163
Query: 833 GTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPF 871
++ APE + ++ D W+ GILL+E+ +G P+
Sbjct: 164 ---KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 4e-06
Identities = 45/194 (23%), Positives = 77/194 (39%), Gaps = 31/194 (15%)
Query: 725 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHV- 783
PG R P + L + + +A +V +E+L + I+RDL NVL+ HV
Sbjct: 113 PGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLV-TEDHVM 171
Query: 784 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII 843
+ DF L+ + R+ + PV +++APE +
Sbjct: 172 KIADFGLARDIHH---------IDYYRKTTNGRLPV----------------KWMAPEAL 206
Query: 844 AGAGHTSAVDWWALGILLYE-MLYGYTPFRGKTRQKTFANILH-KDLKFPSSTPTSLHAK 901
+T D W+ G+LL+E G +P+ G ++ F + ++ P + L+
Sbjct: 207 FDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYRMEKPQNCTQELYH- 265
Query: 902 QLMYRLLHRDPKSR 915
LM H P R
Sbjct: 266 -LMRDCWHEVPSQR 278
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 4e-06
Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 26/168 (15%)
Query: 749 YAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEK 808
Y+ +V +E+L + I+RDL N+LL N V + DF L+ P +
Sbjct: 184 YSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV------- 236
Query: 809 KRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YG 867
R + P+ +++APE I +T D W+ G+LL+E+ G
Sbjct: 237 --RKGDARLPL----------------KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 278
Query: 868 YTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+P+ G + F L + + + T+ Q M H +P R
Sbjct: 279 ASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQR 326
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 48.8 bits (116), Expect = 4e-06
Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 57/274 (20%)
Query: 666 INLQHFRPIKPLGSGDTGSVHLVELCG------------SGQYFAMKAMDKGVMLNRN-- 711
+N++ + ++ +G G+ G V L + G + Q F +A + + N
Sbjct: 3 LNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLV 62
Query: 712 -------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG 764
+ K + ++T+Y G L L + VL D + ++ +V A+EYL
Sbjct: 63 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN 122
Query: 765 IIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEP 824
++RDL NVL+ + ++DF L T E + PV
Sbjct: 123 FVHRDLAARNVLVSEDNVAKVSDFGL--------------TKEASSTQDTGKLPV----- 163
Query: 825 MRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANI 883
++ APE + ++ D W+ GILL+E+ +G P+ + K
Sbjct: 164 -----------KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYP-RIPLKDVVPR 211
Query: 884 LHKDLKF--PSSTPTSLHAKQLMYRLLHRDPKSR 915
+ K K P P ++ +M + H D +R
Sbjct: 212 VEKGYKMDAPDGCPPVVY--DVMKQCWHLDAATR 243
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 48.9 bits (116), Expect = 5e-06
Identities = 54/215 (25%), Positives = 87/215 (40%), Gaps = 30/215 (13%)
Query: 703 DKGVMLNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC 762
DK V L ++ + ++T++ G L L K LK + AA++ + Y+
Sbjct: 61 DKLVPLYAVVSEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIER 120
Query: 763 QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 822
I+RDL+ N+L+ N + DF L+ L NE R +G + P+
Sbjct: 121 MNYIHRDLRAANILVGDNLVCKIADFGLARLIE---------DNEYTAR-QGAKFPI--- 167
Query: 823 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFA 881
++ APE T D W+ GILL E++ G P+ G ++
Sbjct: 168 -------------KWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLE 214
Query: 882 NILHK-DLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+ + P P SLH +LM +DP R
Sbjct: 215 QVERGYRMPCPQGCPESLH--ELMKLCWKKDPDER 247
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 48.3 bits (115), Expect = 6e-06
Identities = 62/275 (22%), Positives = 107/275 (38%), Gaps = 55/275 (20%)
Query: 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQY-FAMKAMDKG------------VMLNRNK 712
I+ + +K LG+G G V + GQY A+K + +G VM+ +
Sbjct: 1 IDPKDLTFLKELGTGQFGVVKYGKW--RGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSH 58
Query: 713 TKT----HVC-------LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH 761
K VC ++T+Y G L L R+ K + + +V + YL
Sbjct: 59 EKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYL-REHGKRFQPSQLLEMCKDVCEGMAYLE 117
Query: 762 CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFM 821
+ I+RDL N L+ G V ++DF LS + +L +++ G + PV
Sbjct: 118 SKQFIHRDLAARNCLVDDQGCVKVSDFGLS-------RYVL---DDEYTSSVGSKFPV-- 165
Query: 822 AEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTF 880
+ PE++ + +S D WA G+L++E+ G P+ +T
Sbjct: 166 --------------RWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETV 211
Query: 881 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+ + L+ S +MY H + R
Sbjct: 212 EKVS-QGLRLYRPHLASEKVYAIMYSCWHEKAEER 245
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 48.8 bits (116), Expect = 7e-06
Identities = 40/168 (23%), Positives = 69/168 (41%), Gaps = 26/168 (15%)
Query: 749 YAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEK 808
Y+ +V +E+L + I+RDL N+LL N V + DF L+ P +
Sbjct: 179 YSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV------- 231
Query: 809 KRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YG 867
R + P+ +++APE I +T+ D W+ G+LL+E+ G
Sbjct: 232 --RKGSARLPL----------------KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLG 273
Query: 868 YTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+P+ G + F L + + + ++M DPK R
Sbjct: 274 ASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKER 321
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 9e-06
Identities = 39/187 (20%), Positives = 75/187 (40%), Gaps = 31/187 (16%)
Query: 734 DRQPTKVLKEDAVRFY--AAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 791
+ +F AAE+ + YL + ++RDL N ++ + V + DF ++
Sbjct: 107 AENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMT 166
Query: 792 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSA 851
+ T+ ++ KG P+R ++APE + T+
Sbjct: 167 --------RDIYETDYYRKGGKG-------LLPVR----------WMAPESLKDGVFTTK 201
Query: 852 VDWWALGILLYEML-YGYTPFRGKTRQKTFANILHKD-LKFPSSTPTSLHAKQLMYRLLH 909
D W+ G++L+EM P++G + ++ ++ L P + P L +LM
Sbjct: 202 SDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDLPENCPDKLL--ELMRMCWQ 259
Query: 910 RDPKSRL 916
+PK R
Sbjct: 260 YNPKMRP 266
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Score = 48.0 bits (114), Expect = 1e-05
Identities = 63/288 (21%), Positives = 111/288 (38%), Gaps = 56/288 (19%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKTKT------------- 715
R +K LGSG G+VH G + K + +R+ +T
Sbjct: 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIK-TIQDRSGRQTFQEITDHMLAMGS 65
Query: 716 ----HVCLITDYCPGGELFL---------LLD--RQPTKVLKEDAVRFYAAEVVVALEYL 760
++ + CPG L L LLD RQ L + + ++ + YL
Sbjct: 66 LDHAYIVRLLGICPGASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYL 125
Query: 761 HCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVF 820
+++R+L N+LL+ + V + DF ++ LL P ++KK + + P+
Sbjct: 126 EEHRMVHRNLAARNILLKSDSIVQIADFGVA-------DLLYP--DDKKYFYSEHKTPI- 175
Query: 821 MAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKT 879
+++A E I +T D W+ G+ ++EM+ YG P+ G R
Sbjct: 176 ---------------KWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAG-MRPHE 219
Query: 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927
++L K + ++ +M + D R E ANE +
Sbjct: 220 VPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTR 267
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 1e-05
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 35/204 (17%)
Query: 719 LITDYCPGGEL--FLLLDR---QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPE 773
+I + G+L FLL R P + + V+F ++ +EYL + I+RDL
Sbjct: 83 VILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKF-MTDIASGMEYLSSKSFIHRDLAAR 141
Query: 774 NVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVG 833
N +L N +V + DF LS + R+ + + PV
Sbjct: 142 NCMLNENMNVCVADFGLSKKI---------YNGDYYRQGRIAKMPV-------------- 178
Query: 834 TEEYIAPEIIAGAGHTSAVDWWALGILLYEM-LYGYTPFRGKTRQKTFANILHKD-LKFP 891
++IA E +A +T+ D W+ G+ ++E+ G TP+ G + + + + LK P
Sbjct: 179 --KWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQP 236
Query: 892 SSTPTSLHAKQLMYRLLHRDPKSR 915
L++ LM +PK R
Sbjct: 237 PDCLDGLYS--LMSSCWLLNPKDR 258
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 1e-05
Identities = 43/168 (25%), Positives = 67/168 (39%), Gaps = 41/168 (24%)
Query: 756 ALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQ 815
++YL ++RDL N+L+ N ++DF LS R
Sbjct: 118 GMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLS-------------------RRLED 158
Query: 816 QNPVFMAE----PMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE-MLYGYTP 870
+ + P+R + APE IA TSA D W+ GI+++E M YG P
Sbjct: 159 SEATYTTKGGKIPIR----------WTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERP 208
Query: 871 FRGKTRQKTFANILHKD---LKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+ + Q + +D L P P++L+ QLM +D R
Sbjct: 209 YWDMSNQDVIKAV--EDGYRLPPPMDCPSALY--QLMLDCWQKDRNER 252
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|219844 pfam08447, PAS_3, PAS fold | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 2e-05
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Query: 497 IIFASDSFLELTEYSREEILGRNCRFLQG--PETDPATVRKI--RAAIDNQTDVTVQLIN 552
II+ S F E+ Y+ EE+ +L PE D VR+ ++ + +
Sbjct: 1 IIYWSPRFEEILGYTPEELKSSYEGWLDLVHPE-DRERVRRALQEFSLKKGEPYSGEYRI 59
Query: 553 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGV 582
K G+ W +P+RD+ G+ IGV
Sbjct: 60 RRKDGEYRWVEARGRPIRDENGKPVRVIGV 89
|
The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs. The PAS fold appears in archaea, eubacteria and eukarya. Length = 90 |
| >gnl|CDD|197509 smart00086, PAC, Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 2e-05
Identities = 11/36 (30%), Positives = 25/36 (69%)
Query: 269 NYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304
+KDG+ W L++ +PI+D++G+V +G+ +++
Sbjct: 6 LRRKDGSYIWVLVSASPIRDEDGEVEGILGVVRDIT 41
|
PAC motif occurs C-terminal to a subset of all known PAS motifs. It is proposed to contribute to the PAS domain fold. Length = 43 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 47.4 bits (112), Expect = 2e-05
Identities = 43/181 (23%), Positives = 77/181 (42%), Gaps = 29/181 (16%)
Query: 749 YAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEK 808
+ ++ + YL + +++RDL NVL++ HV +TDF L+ L +EK
Sbjct: 114 WCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLE---------GDEK 164
Query: 809 KRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE-MLYG 867
+ G + P+ +++A E I T D W+ G+ ++E M +G
Sbjct: 165 EYNADGGKMPI----------------KWMALECIHYRKFTHQSDVWSYGVTIWELMTFG 208
Query: 868 YTPFRG-KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926
P+ G TR+ ++L K + P ++ +M + D SR E A E
Sbjct: 209 GKPYDGIPTRE--IPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFS 266
Query: 927 K 927
+
Sbjct: 267 R 267
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 47.1 bits (112), Expect = 2e-05
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 29/122 (23%)
Query: 746 VRFYAAEVVVALEYLHCQGIIYRDLKPENVLL-QGNGHVSLTDFDLSCLTSCKPQLLLPT 804
++ Y +++ + Y H +++RDLKP+N+L+ + + L DF L+
Sbjct: 104 IKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLA------------- 150
Query: 805 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSA-VDWWALGILLYE 863
R G P+R V T Y APEI+ G+ H S VD W++G + E
Sbjct: 151 ------RAFGI--------PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAE 196
Query: 864 ML 865
M+
Sbjct: 197 MV 198
|
Length = 294 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 47.0 bits (111), Expect = 3e-05
Identities = 41/192 (21%), Positives = 73/192 (38%), Gaps = 29/192 (15%)
Query: 726 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSL 785
G + L+ + L + + A ++ + YL Q ++RDL N L+ N V +
Sbjct: 102 GPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKI 161
Query: 786 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG 845
DF G V+ + R + ++ PE I
Sbjct: 162 GDF-------------------------GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY 196
Query: 846 AGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILH-KDLKFPSSTPTSLHAKQL 903
T+ D W+LG++L+E+ YG P+ + + I + L+ P + P ++ L
Sbjct: 197 RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPKEVY--DL 254
Query: 904 MYRLLHRDPKSR 915
M R+P R
Sbjct: 255 MLGCWQREPHMR 266
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 3e-05
Identities = 35/163 (21%), Positives = 72/163 (44%), Gaps = 28/163 (17%)
Query: 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 776
+ ++ + PGG+ L ++ ++ + V+F A + + YL + I+RDL N L
Sbjct: 67 IYIVMELVPGGDFLSFLRKKKDELKTKQLVKF-ALDAAAGMAYLESKNCIHRDLAARNCL 125
Query: 777 LQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEE 836
+ N + ++DF +S + + + ++ + ++ +
Sbjct: 126 VGENNVLKISDFGMS---------------------RQEDDGIYSSSGLKQI-----PIK 159
Query: 837 YIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQK 878
+ APE + ++S D W+ GILL+E G P+ G T Q+
Sbjct: 160 WTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ 202
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 46.2 bits (109), Expect = 4e-05
Identities = 34/168 (20%), Positives = 65/168 (38%), Gaps = 29/168 (17%)
Query: 750 AAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 809
A ++ +EYL +++DL N+L+ HV ++D LS
Sbjct: 130 AIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLS------------------ 171
Query: 810 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGY 868
++ A+ R + ++ PE I +S D W+ G++L+E+ +G
Sbjct: 172 -------REIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGL 224
Query: 869 TPFRGKTRQKTFANILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
P+ G + Q+ + + L P +++ LM P R
Sbjct: 225 QPYYGFSNQEVIEMVRKRQLLPCSEDCPPRMYS--LMTECWQEGPSRR 270
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 5e-05
Identities = 49/226 (21%), Positives = 84/226 (37%), Gaps = 54/226 (23%)
Query: 717 VCLITDYCPGGEL--FL----LLDRQ-----------PTKVLKEDAVRFYAAEVVVALEY 759
+C+IT+Y G+L FL L D++ + ++ A ++ ++Y
Sbjct: 94 LCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKY 153
Query: 760 LHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPV 819
L ++RDL N L+ N + + DF G +
Sbjct: 154 LSSLNFVHRDLATRNCLVGENLTIKIADF-------------------------GMSRNL 188
Query: 820 FMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY--GYTPFRGKTRQ 877
+ + R V ++A E I T+A D WA G+ L+E+L P+ T +
Sbjct: 189 YAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDE 248
Query: 878 KTFANI--LHKD------LKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+ N +D L P P L+ +LM + RD + R
Sbjct: 249 QVIENAGEFFRDQGRQVYLFRPPPCPQGLY--ELMLQCWSRDCRER 292
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 45.7 bits (108), Expect = 5e-05
Identities = 41/182 (22%), Positives = 74/182 (40%), Gaps = 36/182 (19%)
Query: 749 YAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEK 808
++ +V +EYL + +++RDL N+L+ +G ++DF L+
Sbjct: 105 FSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLA----------------- 147
Query: 809 KRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YG 867
M NS + + + APE + +S D W+ G+LL+E+ YG
Sbjct: 148 ------------RVGSMGVDNSKLPVK-WTAPEALKHKKFSSKSDVWSYGVLLWEVFSYG 194
Query: 868 YTPFRGKTRQKTFANILHKDLKF--PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 925
P+ K K + K + P P ++ LM +PK R H+ ++
Sbjct: 195 RAPYP-KMSLKEVKECVEKGYRMEPPEGCPADVYV--LMTSCWETEPKKRPSFHKLREKL 251
Query: 926 KK 927
+K
Sbjct: 252 EK 253
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 5e-05
Identities = 43/200 (21%), Positives = 82/200 (41%), Gaps = 28/200 (14%)
Query: 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 776
V L+T P G L + ++ +D + + ++ + YL +++RDL NVL
Sbjct: 83 VQLVTQLMPYGCLLDYVRENKDRIGSQDLLN-WCVQIAKGMSYLEEVRLVHRDLAARNVL 141
Query: 777 LQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEE 836
++ HV +TDF L+ L +E + G + P+ +
Sbjct: 142 VKSPNHVKITDFGLARLLD---------IDETEYHADGGKVPI----------------K 176
Query: 837 YIAPEIIAGAGHTSAVDWWALGILLYE-MLYGYTPFRGKTRQKTFANILHKDLKFPSSTP 895
++A E I T D W+ G+ ++E M +G P+ G + ++L K + P
Sbjct: 177 WMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDG-IPAREIPDLLEKGERLPQPPI 235
Query: 896 TSLHAKQLMYRLLHRDPKSR 915
++ +M + D + R
Sbjct: 236 CTIDVYMIMVKCWMIDSECR 255
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 6e-05
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 27/123 (21%)
Query: 743 EDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802
ED ++ + +++ L Y H + ++RD+K N+LL G + L DF L+ L
Sbjct: 115 EDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARL--------- 165
Query: 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILL 861
+ +E R + V T Y PE++ G + A+D W+ G +L
Sbjct: 166 -----------------YNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCIL 208
Query: 862 YEM 864
E+
Sbjct: 209 GEL 211
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 2e-04
Identities = 39/168 (23%), Positives = 70/168 (41%), Gaps = 26/168 (15%)
Query: 749 YAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEK 808
Y+ +V +E+L + I+RDL N+LL N V + DF L+ P +
Sbjct: 178 YSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV------- 230
Query: 809 KRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YG 867
R + P+ +++APE I +T+ D W+ G+LL+E+ G
Sbjct: 231 --RKGDARLPL----------------KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLG 272
Query: 868 YTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+P+ G + F L + + + + +M H +P+ R
Sbjct: 273 ASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDR 320
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337 |
| >gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 3e-04
Identities = 44/184 (23%), Positives = 77/184 (41%), Gaps = 27/184 (14%)
Query: 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ 778
L+ + GG L L + ++ + V +V + ++YL + ++RDL NVLL
Sbjct: 71 LVMEMASGGPLNKFLSGKKDEITVSNVVELMH-QVSMGMKYLEGKNFVHRDLAARNVLLV 129
Query: 779 GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYI 838
+ ++DF LS + L + K R G+ P++ +
Sbjct: 130 NQHYAKISDFGLS-------KALGADDSYYKARSAGKW-------PLK----------WY 165
Query: 839 APEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILH-KDLKFPSSTPT 896
APE I +S D W+ GI ++E YG P++ + + I K L P+ P
Sbjct: 166 APECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCPAECPP 225
Query: 897 SLHA 900
++A
Sbjct: 226 EMYA 229
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257 |
| >gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Score = 43.0 bits (101), Expect = 4e-04
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 25/139 (17%)
Query: 736 QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795
Q K + E + +V + ++YL ++RDL NVLL + ++DF LS
Sbjct: 87 QKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLS---- 142
Query: 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 855
+ L N K + G+ P++ + APE + +S D W
Sbjct: 143 ---KALGADENYYKAKTHGKW-------PVK----------WYAPECMNYYKFSSKSDVW 182
Query: 856 ALGILLYEML-YGYTPFRG 873
+ G+L++E YG P++G
Sbjct: 183 SFGVLMWEAFSYGQKPYKG 201
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 6e-04
Identities = 58/279 (20%), Positives = 111/279 (39%), Gaps = 63/279 (22%)
Query: 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQY---FAMKAMDKGVM--------------L 708
I+ ++ +GSG G V L G A+K + +G M L
Sbjct: 1 IHPSELTLVQEIGSGQFGLVWL----GYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKL 56
Query: 709 NRNK---------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEY 759
+ K ++ +CL+ ++ G L L Q K +E + +V + Y
Sbjct: 57 SHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQE-TLLGMCLDVCEGMAY 115
Query: 760 LHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPV 819
L +I+RDL N L+ N V ++DF ++ + +L +++ G + PV
Sbjct: 116 LESSNVIHRDLAARNCLVGENQVVKVSDFGMT-------RFVL---DDQYTSSTGTKFPV 165
Query: 820 FMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK 878
++ +PE+ + + ++S D W+ G+L++E+ G TP+ ++ +
Sbjct: 166 ----------------KWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE 209
Query: 879 TFANIL--HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
I + K P S++ +LM P+ R
Sbjct: 210 VVETINAGFRLYK-PRLASQSVY--ELMQHCWKERPEDR 245
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 6e-04
Identities = 43/211 (20%), Positives = 84/211 (39%), Gaps = 44/211 (20%)
Query: 718 CLITDYCPGGEL--FLLLDR--------QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIY 767
+I +Y G+L FL + P ++ A+ ++ + +++L ++
Sbjct: 84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVAL---CTQIALGMDHLSNARFVH 140
Query: 768 RDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRA 827
RDL N L+ V + S L+ K +K + + P+R
Sbjct: 141 RDLAARNCLVSSQREVKV-----SLLSLSK-------DVYNSEYYKLRNALI----PLR- 183
Query: 828 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILHK 886
++APE + ++ D W+ G+L++E+ G PF G + ++ +
Sbjct: 184 ---------WLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAG 234
Query: 887 DLKF--PSSTPTSLHAKQLMYRLLHRDPKSR 915
L+ P P+ L+ +LM R +PK R
Sbjct: 235 KLELPVPEGCPSRLY--KLMTRCWAVNPKDR 263
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 7e-04
Identities = 44/192 (22%), Positives = 78/192 (40%), Gaps = 26/192 (13%)
Query: 725 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 784
E+ LL ++ L + + +V +E+L + ++RDL NVLL V
Sbjct: 218 NDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVK 277
Query: 785 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA 844
+ DF L+ ++ KG F+ P++ ++APE I
Sbjct: 278 ICDFGLA----------RDIMHDSNYVSKGS---TFL--PVK----------WMAPESIF 312
Query: 845 GAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQL 903
+T+ D W+ GILL+E+ G TP+ G TF N + + + +
Sbjct: 313 DNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDI 372
Query: 904 MYRLLHRDPKSR 915
M + + +P+ R
Sbjct: 373 MVKCWNSEPEKR 384
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400 |
| >gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 43.2 bits (101), Expect = 8e-04
Identities = 68/287 (23%), Positives = 113/287 (39%), Gaps = 65/287 (22%)
Query: 661 DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---------- 710
D GE L + IK +G+G G V LV+ + ++F KA+ + R
Sbjct: 6 DDGES-RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVN 64
Query: 711 ------------------NKTKTHVCLITDYCPGGELFLLLDRQPTKVLK------EDAV 746
NK + ++ ++C G+L R K K E A+
Sbjct: 65 VMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDL----SRNIQKCYKMFGKIEEHAI 120
Query: 747 RFYAAEVVVALEYLH-------CQGIIYRDLKPENVLLQ-GNGHVSLTDFDLSCLTSCKP 798
+++ AL Y H + +++RDLKP+N+ L G H+ + L +P
Sbjct: 121 VDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNG-RP 179
Query: 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII--AGAGHTSAVDWWA 856
+ K E M ++S VGT Y +PE++ + D WA
Sbjct: 180 IAKIGDFGLSKN---------IGIESM--AHSCVGTPYYWSPELLLHETKSYDDKSDMWA 228
Query: 857 LGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQL 903
LG ++YE+ G TPF + F+ ++ +LK P +K+L
Sbjct: 229 LGCIIYELCSGKTPFH---KANNFSQLI-SELKRGPDLPIKGKSKEL 271
|
Length = 1021 |
| >gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 0.001
Identities = 50/184 (27%), Positives = 73/184 (39%), Gaps = 67/184 (36%)
Query: 755 VALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 813
VAL+Y H + +++ DLKPEN+L++ S T D P TN R
Sbjct: 242 VALDYFHTELHLMHTDLKPENILME----TSDTVVD-------------PVTN----RA- 279
Query: 814 GQQNPVFMAEPMR--------------ASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGI 859
+P R + + V T Y +PE++ G G + D W++G
Sbjct: 280 ------LPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGC 333
Query: 860 LLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPK---SRL 916
++YE+ YT GK T N+ H LH LM + L R P R
Sbjct: 334 IIYEL---YT---GKLLYDTHDNLEH------------LH---LMEKTLGRLPSEWAGRC 372
Query: 917 GSHE 920
G+ E
Sbjct: 373 GTEE 376
|
Length = 467 |
| >gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 0.001
Identities = 42/191 (21%), Positives = 75/191 (39%), Gaps = 42/191 (21%)
Query: 726 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSL 785
L++ P L + ++ +V +E+L + ++RDL NVL+ V +
Sbjct: 223 RTRRDTLINESP--ALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKI 280
Query: 786 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASN-----SFVGTEEYIAP 840
DF L+ + MR SN S +++AP
Sbjct: 281 CDFGLA------------------------------RDIMRDSNYISKGSTFLPLKWMAP 310
Query: 841 EIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLH 899
E I +T+ D W+ GILL+E+ G TP+ + F N + + + + P H
Sbjct: 311 ESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRM--AKPA--H 366
Query: 900 AKQLMYRLLHR 910
A +Y ++ +
Sbjct: 367 ASDEIYEIMQK 377
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401 |
| >gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 42.0 bits (98), Expect = 0.001
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 752 EVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 788
+V+ L LH GI++RD+KPEN+L+ +G V + DF
Sbjct: 317 QVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDF 353
|
Length = 507 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 0.001
Identities = 44/200 (22%), Positives = 78/200 (39%), Gaps = 32/200 (16%)
Query: 726 GGELFLLLDRQPTKVLKE---DAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 782
G + +L+D QP + E + A+++ + YL Q ++RDL N L+ N
Sbjct: 102 GPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLL 161
Query: 783 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEI 842
V + DF G V+ + R + ++ PE
Sbjct: 162 VKIGDF-------------------------GMSRDVYSTDYYRVGGHTMLPIRWMPPES 196
Query: 843 IAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILH-KDLKFPSSTPTSLHA 900
I T+ D W+ G++L+E+ YG P+ + + I + L+ P P ++
Sbjct: 197 IMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVY- 255
Query: 901 KQLMYRLLHRDPKSRLGSHE 920
+M R+P+ RL E
Sbjct: 256 -DIMLGCWQREPQQRLNIKE 274
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|214512 smart00091, PAS, PAS domain | Back alignment and domain information |
|---|
Score = 37.4 bits (87), Expect = 0.002
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 214 IMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS 262
I+YA+ ++ GY+ +E++G++ L PED +++E LQ S
Sbjct: 23 ILYANPAAEELLGYSPEELIGKSLLEL----IHPEDRERVQEALQRLLS 67
|
PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. Length = 67 |
| >gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 0.003
Identities = 37/158 (23%), Positives = 60/158 (37%), Gaps = 34/158 (21%)
Query: 717 VCLITDYCPGGEL--FLLLDRQPTKVLKEDAV-------RFYAAEVVVALEYLHCQGIIY 767
+C+IT+Y G+L FL K D V F A ++ ++YL ++
Sbjct: 94 LCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVH 153
Query: 768 RDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRA 827
RDL N L+ N + + DF G ++ + R
Sbjct: 154 RDLATRNCLVGKNYTIKIADF-------------------------GMSRNLYSGDYYRI 188
Query: 828 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 865
V +++ E I T+A D WA G+ L+E+L
Sbjct: 189 QGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEIL 226
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.003
Identities = 46/204 (22%), Positives = 83/204 (40%), Gaps = 30/204 (14%)
Query: 714 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPE 773
K + ++ + GG+ L + ++ ++ ++ +EYL + I+RDL
Sbjct: 65 KQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQM-VENAAAGMEYLESKHCIHRDLAAR 123
Query: 774 NVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVG 833
N L+ + ++DF +S + + +T K Q PV
Sbjct: 124 NCLVTEKNVLKISDFGMS---REEEDGVYASTGGMK------QIPV-------------- 160
Query: 834 TEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILHK-DLKFP 891
++ APE + ++S D W+ GILL+E G P+ + Q+T I L P
Sbjct: 161 --KWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCP 218
Query: 892 SSTPTSLHAKQLMYRLLHRDPKSR 915
P +++ +LM R DP R
Sbjct: 219 ELCPDAVY--RLMERCWEYDPGQR 240
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.003
Identities = 33/145 (22%), Positives = 60/145 (41%), Gaps = 45/145 (31%)
Query: 737 PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS----- 791
P + + V A ++ + YLH +G+I++D+ N ++ V +TD LS
Sbjct: 111 PQALSTQQLVHM-AIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFP 169
Query: 792 ----CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG 847
CL NE + P++ ++A E +
Sbjct: 170 MDYHCLGD----------NENR--------------PVK----------WMALESLVNKE 195
Query: 848 HTSAVDWWALGILLYEML-YGYTPF 871
++SA D W+ G+LL+E++ G TP+
Sbjct: 196 YSSASDVWSFGVLLWELMTLGQTPY 220
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280 |
| >gnl|CDD|165211 PHA02882, PHA02882, putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.004
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 728 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTD 787
E+F + + K++K +++ LEY+H GI + D+KPEN+++ GN + D
Sbjct: 115 EIFKRIKCKNKKLIKNIMK-----DMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIID 169
Query: 788 F 788
+
Sbjct: 170 Y 170
|
Length = 294 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.004
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 47/186 (25%)
Query: 707 MLNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKED----------------AVRFYA 750
+L + + ++ L +Y P G L L + ++VL+ D + +A
Sbjct: 73 LLGACEHRGYLYLAIEYAPHGNLLDFLRK--SRVLETDPAFAIANSTASTLSSQQLLHFA 130
Query: 751 AEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKR 810
A+V ++YL + I+RDL N+L+ N + DF LS
Sbjct: 131 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS------------------- 171
Query: 811 RHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYT 869
+GQ+ V++ + M ++A E + + +T+ D W+ G+LL+E++ G T
Sbjct: 172 --RGQE--VYVKKTMGRL-----PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT 222
Query: 870 PFRGKT 875
P+ G T
Sbjct: 223 PYCGMT 228
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 975 | |||
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.98 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.98 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.98 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.98 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.98 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.98 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.98 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.98 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.98 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.98 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.98 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.98 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.98 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.98 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.98 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.98 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.98 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.98 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.98 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.98 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.98 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.98 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.98 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.98 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.98 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.98 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.98 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.98 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.98 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.98 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.98 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.98 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.98 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.98 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.98 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.97 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.97 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.97 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.97 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.97 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.97 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.97 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.97 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.97 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.97 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.97 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.97 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.97 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.97 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.97 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.97 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.97 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.97 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.97 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.97 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.97 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.97 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.97 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.97 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.97 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.97 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.97 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.97 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.97 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.97 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.97 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.97 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.97 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.97 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.97 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.97 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.97 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.97 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.97 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.97 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.97 | |
| PRK13560 | 807 | hypothetical protein; Provisional | 99.97 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.97 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.97 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.97 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.97 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.97 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.97 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.97 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.97 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.97 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.97 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.97 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.97 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.97 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.97 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.97 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.97 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.97 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.97 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.97 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.97 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.97 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.97 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.97 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.97 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.97 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.97 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.96 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.96 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.96 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.96 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.96 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.96 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.96 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.96 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.96 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.96 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.96 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 99.96 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.96 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 99.95 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.95 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.95 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.95 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.95 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.95 | |
| PRK09776 | 1092 | putative diguanylate cyclase; Provisional | 99.94 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.94 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.94 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 99.94 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.94 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.93 | |
| TIGR02040 | 442 | PpsR-CrtJ transcriptional regulator PpsR. This mod | 99.93 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.93 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.93 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.93 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.92 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.92 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.92 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.92 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.92 | |
| PRK13560 | 807 | hypothetical protein; Provisional | 99.91 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.91 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.89 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.89 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.89 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.88 | |
| PRK11359 | 799 | cyclic-di-GMP phosphodiesterase; Provisional | 99.87 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.86 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.86 | |
| TIGR02938 | 494 | nifL_nitrog nitrogen fixation negative regulator N | 99.86 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.85 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.85 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.8 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.79 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.79 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.77 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.74 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.72 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.71 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.71 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.68 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.68 | |
| PF13426 | 104 | PAS_9: PAS domain; PDB: 3ULF_B 3UE6_E 2Z6D_B 2Z6C_ | 99.64 | |
| PF13426 | 104 | PAS_9: PAS domain; PDB: 3ULF_B 3UE6_E 2Z6D_B 2Z6C_ | 99.64 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.63 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.63 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.62 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.6 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.53 | |
| PF08448 | 110 | PAS_4: PAS fold; InterPro: IPR013656 The PAS fold | 99.52 | |
| PF08448 | 110 | PAS_4: PAS fold; InterPro: IPR013656 The PAS fold | 99.52 | |
| PF00989 | 113 | PAS: PAS fold; InterPro: IPR013767 PAS domains are | 99.51 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.51 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.49 | |
| PF00989 | 113 | PAS: PAS fold; InterPro: IPR013767 PAS domains are | 99.49 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.48 | |
| PRK13557 | 540 | histidine kinase; Provisional | 99.47 | |
| PRK13559 | 361 | hypothetical protein; Provisional | 99.46 | |
| PRK09776 | 1092 | putative diguanylate cyclase; Provisional | 99.46 | |
| PRK11091 | 779 | aerobic respiration control sensor protein ArcB; P | 99.46 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.45 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.44 | |
| PRK13557 | 540 | histidine kinase; Provisional | 99.4 | |
| PRK11091 | 779 | aerobic respiration control sensor protein ArcB; P | 99.38 | |
| PRK13559 | 361 | hypothetical protein; Provisional | 99.38 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.35 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.34 | |
| PRK10060 | 663 | RNase II stability modulator; Provisional | 99.33 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.31 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.29 | |
| PRK13558 | 665 | bacterio-opsin activator; Provisional | 99.25 | |
| TIGR02040 | 442 | PpsR-CrtJ transcriptional regulator PpsR. This mod | 99.24 | |
| PRK13558 | 665 | bacterio-opsin activator; Provisional | 99.22 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.22 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.21 | |
| TIGR02938 | 494 | nifL_nitrog nitrogen fixation negative regulator N | 99.17 | |
| PRK10060 | 663 | RNase II stability modulator; Provisional | 99.16 | |
| TIGR00229 | 124 | sensory_box PAS domain S-box. The PAS domain was p | 99.15 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.14 | |
| PRK11359 | 799 | cyclic-di-GMP phosphodiesterase; Provisional | 99.12 | |
| PF08447 | 91 | PAS_3: PAS fold; InterPro: IPR013655 The PAS fold | 99.07 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.06 | |
| TIGR00229 | 124 | sensory_box PAS domain S-box. The PAS domain was p | 99.05 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.02 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 98.98 | |
| PF08447 | 91 | PAS_3: PAS fold; InterPro: IPR013655 The PAS fold | 98.96 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 98.91 | |
| PRK11073 | 348 | glnL nitrogen regulation protein NR(II); Provision | 98.9 | |
| PRK11360 | 607 | sensory histidine kinase AtoS; Provisional | 98.87 | |
| COG3829 | 560 | RocR Transcriptional regulator containing PAS, AAA | 98.84 | |
| cd00130 | 103 | PAS PAS domain; PAS motifs appear in archaea, euba | 98.83 | |
| cd00130 | 103 | PAS PAS domain; PAS motifs appear in archaea, euba | 98.82 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 98.78 | |
| TIGR02966 | 333 | phoR_proteo phosphate regulon sensor kinase PhoR. | 98.76 | |
| KOG0501 | 971 | consensus K+-channel KCNQ [Inorganic ion transport | 98.73 | |
| TIGR02966 | 333 | phoR_proteo phosphate regulon sensor kinase PhoR. | 98.73 | |
| PRK11073 | 348 | glnL nitrogen regulation protein NR(II); Provision | 98.71 | |
| PF13596 | 106 | PAS_10: PAS domain; PDB: 3CAX_A 2QKP_D. | 98.71 | |
| PRK11360 | 607 | sensory histidine kinase AtoS; Provisional | 98.71 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 98.66 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 98.64 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 98.63 | |
| PF13596 | 106 | PAS_10: PAS domain; PDB: 3CAX_A 2QKP_D. | 98.61 | |
| PF12860 | 115 | PAS_7: PAS fold | 98.59 | |
| PRK11388 | 638 | DNA-binding transcriptional regulator DhaR; Provis | 98.59 | |
| PF12860 | 115 | PAS_7: PAS fold | 98.55 | |
| KOG3558 | 768 | consensus Hypoxia-inducible factor 1/Neuronal PAS | 98.51 | |
| KOG0501 | 971 | consensus K+-channel KCNQ [Inorganic ion transport | 98.45 | |
| COG2202 | 232 | AtoS FOG: PAS/PAC domain [Signal transduction mech | 98.44 | |
| PRK11086 | 542 | sensory histidine kinase DcuS; Provisional | 98.44 | |
| PRK11006 | 430 | phoR phosphate regulon sensor protein; Provisional | 98.4 | |
| COG3829 | 560 | RocR Transcriptional regulator containing PAS, AAA | 98.39 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 98.39 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.38 | |
| COG5002 | 459 | VicK Signal transduction histidine kinase [Signal | 98.38 |
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-51 Score=453.67 Aligned_cols=292 Identities=40% Similarity=0.692 Sum_probs=243.1
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhccc---------------------------cccCCeE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---------------------------NKTKTHV 717 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~~---------------------------~~~~~~~ 717 (975)
.+..++|.+++.||+|+||.||+|+-+.||..||+|+++|..++.. +++..++
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~L 216 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYL 216 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCee
Confidence 4678899999999999999999999999999999999998754433 3488999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
||||||++||++..+|.+. +.|++..++.++.+++.|++.||+.|+|||||||+|+||+..|++||+|||++..+...
T Consensus 217 YLiMEylPGGD~mTLL~~~--~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLLMRK--DTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred EEEEEecCCccHHHHHHhc--CcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhh
Confidence 9999999999999999885 67999999999999999999999999999999999999999999999999999765543
Q ss_pred CCCCCCc----chhhhhc-cCCCCCc---------------ccccccccccccccCCCCccchhhhcCCCCCChhHHHHH
Q 002051 798 PQLLLPT----TNEKKRR-HKGQQNP---------------VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWAL 857 (975)
Q Consensus 798 ~~~~~~~----~~~~~~~-~~~~~~~---------------~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSL 857 (975)
....... ....... ....... .+.........+.+|||.|||||++.+.+|+..||.|||
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 2211100 0000000 0000000 000112223456899999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHhcC--CCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCC
Q 002051 858 GILLYEMLYGYTPFRGKTRQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935 (975)
Q Consensus 858 G~il~ell~G~~Pf~~~~~~~~~~~i~~~~--~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~ 935 (975)
|||+|||+.|.+||.+.++.+.+.+|++.. +.+|....++.+++|||.+||. ||++|+. ...++||.+||||++++
T Consensus 375 G~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG-~~G~~EIK~HPfF~~v~ 452 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLG-SKGAEEIKKHPFFKGVD 452 (550)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcC-cccHHHHhcCCccccCC
Confidence 999999999999999999999999999865 7888888899999999999999 9999998 56799999999999999
Q ss_pred cchhhccCCCCCCCCCcccCccccccc
Q 002051 936 WALVRCMNPPELDAPLFATDTEKEYKV 962 (975)
Q Consensus 936 ~~~~~~~~~~~~~~p~~~~~~~~~~~~ 962 (975)
|..++.+.+|.+ |.+.++++-.|.+
T Consensus 453 W~~l~~~~apfv--P~v~~~~DT~yFd 477 (550)
T KOG0605|consen 453 WDHLREMPAPFV--PQVNSELDTQYFD 477 (550)
T ss_pred cchhhcCCCCCC--CCCCCcccccccc
Confidence 999999998855 8877777766655
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-50 Score=426.43 Aligned_cols=312 Identities=51% Similarity=0.907 Sum_probs=267.5
Q ss_pred CCCCCCCCCCchHHHHhhh-cccccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc------------
Q 002051 642 HPKPHRKDSPPWKAIQKIL-DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML------------ 708 (975)
Q Consensus 642 ~~~p~~~~~~~~~~~~~~~-~~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~------------ 708 (975)
..+||......|.++..+. .....+..++|++++.||.|.-|+||+|..+.++..+|+|+|.+..+.
T Consensus 49 ~~kph~~~d~~w~a~~~~~~~~~~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~ 128 (459)
T KOG0610|consen 49 GNKPHKGNDVRWEAISSIRNSKDGSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTER 128 (459)
T ss_pred cCCCCCCCchhhhhhccccccCCCccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHH
Confidence 3568888888888887655 355678889999999999999999999999999999999999887533
Q ss_pred ---------------cccccCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 002051 709 ---------------NRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPE 773 (975)
Q Consensus 709 ---------------~~~~~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~ 773 (975)
...+...+.|+|||||+||+|+.++++++.+.|++..++.++..++.||+|||-.|||+|||||+
T Consensus 129 eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPE 208 (459)
T KOG0610|consen 129 EILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPE 208 (459)
T ss_pred HHHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcc
Confidence 23347889999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEecCCcEEEeeccCCCccCCCCCCCCCcc----------------------h-hhhhccCCC-----CCccccc-cc
Q 002051 774 NVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT----------------------N-EKKRRHKGQ-----QNPVFMA-EP 824 (975)
Q Consensus 774 NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~----------------------~-~~~~~~~~~-----~~~~~~~-~~ 824 (975)
||||.++|+|-|+||.++......+....... . ..++..+.. ..+.++. ..
T Consensus 209 NILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~ 288 (459)
T KOG0610|consen 209 NILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPT 288 (459)
T ss_pred eeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCC
Confidence 99999999999999999987755444332110 0 000000000 0111222 22
Q ss_pred ccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHH
Q 002051 825 MRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLM 904 (975)
Q Consensus 825 ~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li 904 (975)
...+++++||-.|.|||++.|...+.++|.|+||+++|||++|..||.|.+..+.+.+|+.+.+.||....++..++|||
T Consensus 289 ~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLI 368 (459)
T KOG0610|consen 289 GARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLI 368 (459)
T ss_pred CccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHH
Confidence 35677899999999999999999999999999999999999999999999999999999999999999989999999999
Q ss_pred HHhcccCccccCCChhhHHHHHcCCCccCCCcchhhccCCCCCCCCCcc
Q 002051 905 YRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFA 953 (975)
Q Consensus 905 ~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~ 953 (975)
+++|.+||.+|+.+...|.||.+||||++++|+.+++..||.++.|.--
T Consensus 369 r~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLir~~~PP~iP~~~d~ 417 (459)
T KOG0610|consen 369 RKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALIRCARPPEIPKPVDG 417 (459)
T ss_pred HHHhccChhhhhccccchHHhhcCccccCCChhheeccCCCcCCCcccc
Confidence 9999999999999999999999999999999999999999999766643
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-49 Score=420.16 Aligned_cols=266 Identities=43% Similarity=0.742 Sum_probs=230.9
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhccc---------------------------cccCCeE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---------------------------NKTKTHV 717 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~~---------------------------~~~~~~~ 717 (975)
.+..++|++++.||+|+||+||.++.+.|++.||+|+|+|..+... +++..++
T Consensus 21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kL 100 (357)
T KOG0598|consen 21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKL 100 (357)
T ss_pred cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeE
Confidence 3556799999999999999999999999999999999998765443 2378899
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|||+||+.||+|+..|.+. +.+++..++.++..|+.||.|||++|||||||||+|||++.+|+++|+|||+++..-
T Consensus 101 ylVld~~~GGeLf~hL~~e--g~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~-- 176 (357)
T KOG0598|consen 101 YLVLDYLNGGELFYHLQRE--GRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDL-- 176 (357)
T ss_pred EEEEeccCCccHHHHHHhc--CCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcc--
Confidence 9999999999999999875 679999999999999999999999999999999999999999999999999996421
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
.......++|||+.|||||++.+.+|+..+|.||||+++|+|++|.+||.+.+..
T Consensus 177 -------------------------~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~ 231 (357)
T KOG0598|consen 177 -------------------------KDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVK 231 (357)
T ss_pred -------------------------cCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHH
Confidence 1123445689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhccCCCCCCCCCcccCcc
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDTE 957 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~~~ 957 (975)
.++.+|..+....+.. -++.++++||+++|..||++|+.....+.+|..||||.+++|..+....-+..+.|......+
T Consensus 232 ~~~~~I~~~k~~~~p~-~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~l~~k~l~PpF~P~~~~~~~ 310 (357)
T KOG0598|consen 232 KMYDKILKGKLPLPPG-YLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEKLLAKKLSPPFKPNVTGLED 310 (357)
T ss_pred HHHHHHhcCcCCCCCc-cCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHHHHhcCCCCCeecCCCCccc
Confidence 9999999987443322 378899999999999999999864556999999999999999988665555456777665554
Q ss_pred ccc
Q 002051 958 KEY 960 (975)
Q Consensus 958 ~~~ 960 (975)
...
T Consensus 311 ~~~ 313 (357)
T KOG0598|consen 311 TSN 313 (357)
T ss_pred ccc
Confidence 443
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-48 Score=399.60 Aligned_cols=249 Identities=47% Similarity=0.839 Sum_probs=225.4
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc---------------------------cccccCCeEE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML---------------------------NRNKTKTHVC 718 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~---------------------------~~~~~~~~~~ 718 (975)
...++|++++.||.|+||.|.+++++.+|..||+|++++..+. ....+..++|
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ly 120 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLY 120 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEE
Confidence 5678999999999999999999999999999999999887432 2233788999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
|||||++||.|+.++++. +.+++..++.++.||+.||+|||+++|++|||||+|||++.+|.+||+|||+|+...
T Consensus 121 mvmeyv~GGElFS~Lrk~--~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~--- 195 (355)
T KOG0616|consen 121 MVMEYVPGGELFSYLRKS--GRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVS--- 195 (355)
T ss_pred EEEeccCCccHHHHHHhc--CCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEec---
Confidence 999999999999999874 679999999999999999999999999999999999999999999999999997653
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~ 878 (975)
....+.||||.|+|||++...+|+.++|.||||+++|||+.|.+||...+...
T Consensus 196 ---------------------------~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~ 248 (355)
T KOG0616|consen 196 ---------------------------GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQ 248 (355)
T ss_pred ---------------------------CcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHH
Confidence 22457899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChh-hHHHHHcCCCccCCCcchh--hccCCCCCC
Q 002051 879 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALV--RCMNPPELD 948 (975)
Q Consensus 879 ~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~-~~~elL~Hp~f~~~~~~~~--~~~~~~~~~ 948 (975)
++++|+.+.+.+|.. .++++++||+++|+.|-.+|..... ...+|..||||++++|..+ +++.+|.++
T Consensus 249 iY~KI~~~~v~fP~~--fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i~~r~ie~P~~p 319 (355)
T KOG0616|consen 249 IYEKILEGKVKFPSY--FSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAILQRKIEPPFEP 319 (355)
T ss_pred HHHHHHhCcccCCcc--cCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHHHhhccccCCCCC
Confidence 999999999999876 6889999999999999999976543 7899999999999999866 556666553
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-48 Score=426.36 Aligned_cols=258 Identities=38% Similarity=0.685 Sum_probs=229.4
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhcccc----------------------------ccCCeE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN----------------------------KTKTHV 717 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~~~----------------------------~~~~~~ 717 (975)
....+|++++.||.|+|++|++|+++.+++.||||++.|..++... ++...+
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 4567999999999999999999999999999999999877543322 277889
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|+|+||+++|+|.++|.+. +.|++..++.++.||+.||+|||++|||||||||+|||++.+|++||+|||.|+.++..
T Consensus 150 YFvLe~A~nGdll~~i~K~--Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKY--GSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPS 227 (604)
T ss_pred EEEEEecCCCcHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChh
Confidence 9999999999999999986 67999999999999999999999999999999999999999999999999999887643
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccc--cccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRA--SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
....- ++ ....... ..+++||..|.+||+|.....++.+|||+||||||.|+.|.+||.+.+
T Consensus 228 ~~~~~--------------~~--~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N 291 (604)
T KOG0592|consen 228 QKSQE--------------NP--VDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN 291 (604)
T ss_pred hcccc--------------Cc--cCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc
Confidence 32110 00 0111112 367999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhccCCCCC
Q 002051 876 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPEL 947 (975)
Q Consensus 876 ~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~~~~~~~ 947 (975)
+..++++|+...+.||.. .++.+++||+++|..||.+|+| +++|.+||||.++||..++...||.+
T Consensus 292 eyliFqkI~~l~y~fp~~--fp~~a~dLv~KLLv~dp~~Rlt----~~qIk~HpFF~~Vdw~nlw~~~PP~l 357 (604)
T KOG0592|consen 292 EYLIFQKIQALDYEFPEG--FPEDARDLIKKLLVRDPSDRLT----SQQIKAHPFFEGVDWENLWQQTPPKL 357 (604)
T ss_pred HHHHHHHHHHhcccCCCC--CCHHHHHHHHHHHccCcccccc----HHHHhhCcccccCChhhhhhcCCCcc
Confidence 999999999999888875 6789999999999999999999 99999999999999999999999988
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-46 Score=424.94 Aligned_cols=267 Identities=40% Similarity=0.730 Sum_probs=233.9
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhcccc----------------------------ccCC
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN----------------------------KTKT 715 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~~~----------------------------~~~~ 715 (975)
..+..++|.++++||+|+||+|+++..+.+++.||||+++|..++... +++.
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~ 442 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE 442 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC
Confidence 467889999999999999999999999999999999999998654333 3789
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
|+|+||||+.||+++.+.+ ...|++..++.|+..|+.||+|||++||||||||.+|||+|..|++||+|||+++..-
T Consensus 443 ~l~fvmey~~Ggdm~~~~~---~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 443 HLFFVMEYVAGGDLMHHIH---TDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM 519 (694)
T ss_pred eEEEEEEecCCCcEEEEEe---cccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccC
Confidence 9999999999999544443 3679999999999999999999999999999999999999999999999999996522
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
......+++||||.|||||++.+..|+.++|.|||||+||+|+.|..||.+.+
T Consensus 520 ---------------------------~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gdd 572 (694)
T KOG0694|consen 520 ---------------------------GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDD 572 (694)
T ss_pred ---------------------------CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 11235678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhccCCCCCCCCCccc
Q 002051 876 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPLFAT 954 (975)
Q Consensus 876 ~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~ 954 (975)
+.+++..|+.....+|.. +|.++.++|+++|.+||++|+.+- ..+.+|..||||++++|..+....-+..+.|.+.+
T Consensus 573 Eee~FdsI~~d~~~yP~~--ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~i~~ 650 (694)
T KOG0694|consen 573 EEEVFDSIVNDEVRYPRF--LSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLLNRRIKPPFVPTIKG 650 (694)
T ss_pred HHHHHHHHhcCCCCCCCc--ccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHHhhccCCCCCCcccCC
Confidence 999999999998888765 788999999999999999999963 34789999999999999988555444446688777
Q ss_pred Cccccccc
Q 002051 955 DTEKEYKV 962 (975)
Q Consensus 955 ~~~~~~~~ 962 (975)
+.+..+..
T Consensus 651 ~~D~snFd 658 (694)
T KOG0694|consen 651 PEDVSNFD 658 (694)
T ss_pred hhhhcccc
Confidence 76655543
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-46 Score=397.23 Aligned_cols=235 Identities=33% Similarity=0.509 Sum_probs=203.8
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhcc-------------------------------ccccCCe
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-------------------------------RNKTKTH 716 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~-------------------------------~~~~~~~ 716 (975)
.+.|.+.+.||+|+||.|.+|..+.||+.||||++++..... .+....+
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 356899999999999999999999999999999998764322 1225677
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC---CcEEEeeccCCCc
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCL 793 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~---g~vkL~DFG~a~~ 793 (975)
.||||||+.||+|++.+..+ +.+.+...+.+++||+.||.|||++||+||||||+|||+..+ ..+||+|||+|+.
T Consensus 251 ~YmVlE~v~GGeLfd~vv~n--k~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~ 328 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVAN--KYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKV 328 (475)
T ss_pred eEEEEEEecCccHHHHHHhc--cccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhc
Confidence 89999999999999999875 669999999999999999999999999999999999999876 6799999999976
Q ss_pred cCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCC---CChhHHHHHHHHHHHHHhCCCC
Q 002051 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH---TSAVDWWALGILLYEMLYGYTP 870 (975)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~---~~k~DIWSLG~il~ell~G~~P 870 (975)
.+. .....++||||.|.|||++.+..+ ..++|||||||+||-+++|.+|
T Consensus 329 ~g~----------------------------~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pP 380 (475)
T KOG0615|consen 329 SGE----------------------------GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPP 380 (475)
T ss_pred ccc----------------------------ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCC
Confidence 541 223467899999999999987653 3488999999999999999999
Q ss_pred CCCCCHHH-HHHHHHhcCCCCC--CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCc
Q 002051 871 FRGKTRQK-TFANILHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936 (975)
Q Consensus 871 f~~~~~~~-~~~~i~~~~~~~p--~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~ 936 (975)
|.+..... +.++|.++.+.+- .+..+|.++.+||++||..||++||| +.|+|+||||+..+-
T Consensus 381 FS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s----~~eaL~hpW~~~~~~ 445 (475)
T KOG0615|consen 381 FSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPS----ADEALNHPWFKDAPC 445 (475)
T ss_pred cccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcC----HHHHhcChhhhcccc
Confidence 98866555 7888998887764 34568999999999999999999999 999999999997763
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-45 Score=386.19 Aligned_cols=236 Identities=29% Similarity=0.482 Sum_probs=204.6
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-------------------------hccccccCC-eEE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------------------MLNRNKTKT-HVC 718 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------------------~~~~~~~~~-~~~ 718 (975)
.+...+.+.++.||+|..|+||+|+|+.|++.||+|++.... ++..+..+. .++
T Consensus 75 ~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~is 154 (364)
T KOG0581|consen 75 GISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEIS 154 (364)
T ss_pred ccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEE
Confidence 356678999999999999999999999999999999983221 112222455 599
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~-~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|+||||.||+|.++++.. +.+++..+..|+.++++||.|||. ++||||||||+|||++..|.|||||||.+..+..
T Consensus 155 I~mEYMDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvn- 231 (364)
T KOG0581|consen 155 ICMEYMDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVN- 231 (364)
T ss_pred eehhhcCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhh-
Confidence 999999999999999875 669999999999999999999995 8999999999999999999999999999966431
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCC---
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK--- 874 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~--- 874 (975)
...++++||..|||||.+.+..|+.++||||||++++|+.+|+.||...
T Consensus 232 ----------------------------S~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~ 283 (364)
T KOG0581|consen 232 ----------------------------SIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPP 283 (364)
T ss_pred ----------------------------hhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCC
Confidence 1456889999999999999999999999999999999999999999874
Q ss_pred --CHHHHHHHHHhcCCC-CCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCc
Q 002051 875 --TRQKTFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936 (975)
Q Consensus 875 --~~~~~~~~i~~~~~~-~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~ 936 (975)
...+.+..|+.+..+ +|.. .+|+++++|+..||++||.+|+| ++||++|||++....
T Consensus 284 ~~~~~~Ll~~Iv~~ppP~lP~~-~fS~ef~~FV~~CL~Kdp~~R~s----~~qLl~Hpfi~~~~~ 343 (364)
T KOG0581|consen 284 YLDIFELLCAIVDEPPPRLPEG-EFSPEFRSFVSCCLRKDPSERPS----AKQLLQHPFIKKFED 343 (364)
T ss_pred CCCHHHHHHHHhcCCCCCCCcc-cCCHHHHHHHHHHhcCCcccCCC----HHHHhcCHHHhhccc
Confidence 667888888885543 3333 58999999999999999999999 999999999985443
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-44 Score=403.99 Aligned_cols=229 Identities=33% Similarity=0.585 Sum_probs=211.7
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch---------------------------hccccccCCeEEEEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV---------------------------MLNRNKTKTHVCLIT 721 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~---------------------------~~~~~~~~~~~~lV~ 721 (975)
.+|...+.||+|+|+.||.+++..+|+.||+|++.+.. ++..+++.+++|||+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 57999999999999999999999999999999998753 334555899999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
|+|..++|..++++. +.++|.+++.+++||+.||.|||+++|||||||..|||++.+.+|||+|||+|..+...
T Consensus 98 ELC~~~sL~el~Krr--k~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~---- 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRR--KPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD---- 171 (592)
T ss_pred EecCCccHHHHHHhc--CCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCc----
Confidence 999999999999864 77999999999999999999999999999999999999999999999999999775422
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~ 881 (975)
.....+.||||.|.|||++....++..+||||+||+||-|+.|++||...+..+++.
T Consensus 172 -----------------------~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~ 228 (592)
T KOG0575|consen 172 -----------------------GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYN 228 (592)
T ss_pred -----------------------ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHH
Confidence 134467899999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCcc
Q 002051 882 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932 (975)
Q Consensus 882 ~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~ 932 (975)
+|....+.+|. .+|.++++||.+||+.||.+||| +++||.|+||+
T Consensus 229 ~Ik~~~Y~~P~--~ls~~A~dLI~~lL~~~P~~Rps----l~~vL~h~Ff~ 273 (592)
T KOG0575|consen 229 KIKLNEYSMPS--HLSAEAKDLIRKLLRPNPSERPS----LDEVLDHPFFK 273 (592)
T ss_pred HHHhcCccccc--ccCHHHHHHHHHHhcCCcccCCC----HHHHhcCHhhh
Confidence 99999999988 58999999999999999999999 99999999994
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-44 Score=366.08 Aligned_cols=265 Identities=41% Similarity=0.777 Sum_probs=233.0
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhcccc---------------------------ccCCe
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN---------------------------KTKTH 716 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~~~---------------------------~~~~~ 716 (975)
..+.+++|..++.||+|.||.|.+|+.+.+++.||||++++++++... +.+++
T Consensus 163 ~kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~dr 242 (516)
T KOG0690|consen 163 NKVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDR 242 (516)
T ss_pred ceeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCce
Confidence 356789999999999999999999999999999999999998654333 36889
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
+|+||||.+||.|+-+|.+ ...+++..++.+...|+.||.|||+++||.||||.+|+|++.+|++||+|||+++...
T Consensus 243 lCFVMeyanGGeLf~HLsr--er~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I- 319 (516)
T KOG0690|consen 243 LCFVMEYANGGELFFHLSR--ERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI- 319 (516)
T ss_pred EEEEEEEccCceEeeehhh--hhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcc-
Confidence 9999999999999999977 4679999999999999999999999999999999999999999999999999985421
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 876 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~ 876 (975)
.......++||||.|+|||++....|+.++|.|.+|+++|||++|+.||.+.+.
T Consensus 320 --------------------------~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh 373 (516)
T KOG0690|consen 320 --------------------------KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH 373 (516)
T ss_pred --------------------------cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccch
Confidence 112345689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhc--cCCCCCCCCCcc
Q 002051 877 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC--MNPPELDAPLFA 953 (975)
Q Consensus 877 ~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~--~~~~~~~~p~~~ 953 (975)
...+..|+-+.+.||.. ++++++.|+..+|.+||.+|+.-- .-+.||..|+||.+++|..... ..|| +.|...
T Consensus 374 ~kLFeLIl~ed~kFPr~--ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~~~Kki~PP--fKPqVt 449 (516)
T KOG0690|consen 374 EKLFELILMEDLKFPRT--LSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEATYRKKIEPP--FKPQVT 449 (516)
T ss_pred hHHHHHHHhhhccCCcc--CCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHHHHhccCCC--CCCCcc
Confidence 99999999999999875 799999999999999999998742 3589999999999999987643 4444 457666
Q ss_pred cCcccccc
Q 002051 954 TDTEKEYK 961 (975)
Q Consensus 954 ~~~~~~~~ 961 (975)
++++--|.
T Consensus 450 SetDTryF 457 (516)
T KOG0690|consen 450 SETDTRYF 457 (516)
T ss_pred cccchhhh
Confidence 66655443
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-44 Score=364.72 Aligned_cols=237 Identities=27% Similarity=0.476 Sum_probs=199.9
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------------------hccccccCCeEEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------------------MLNRNKTKTHVCLIT 721 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------------~~~~~~~~~~~~lV~ 721 (975)
++.|+.+.++|+|+||+||+|+++.||+.||||.+.... +++.+.....++||+
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVF 80 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVF 80 (396)
T ss_pred CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEe
Confidence 467999999999999999999999999999999875431 122333678899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
||| ..++.+.+.+.+ ..++...++++++|++.|+.|||++++|||||||+|||++.+|.+||||||+|+.+...
T Consensus 81 E~~-dhTvL~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p---- 154 (396)
T KOG0593|consen 81 EYC-DHTVLHELERYP-NGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAP---- 154 (396)
T ss_pred eec-chHHHHHHHhcc-CCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCC----
Confidence 999 557777787764 45899999999999999999999999999999999999999999999999999876532
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~ 880 (975)
....+.++.|.+|+|||.+.| ..|+.++||||+||++.||++|.+.|.+.+..+++
T Consensus 155 -----------------------gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQL 211 (396)
T KOG0593|consen 155 -----------------------GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQL 211 (396)
T ss_pred -----------------------cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHH
Confidence 223345788999999999988 78999999999999999999999999999999988
Q ss_pred HHHHhc-------------------CCCCCCC----------CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 881 ANILHK-------------------DLKFPSS----------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 881 ~~i~~~-------------------~~~~p~~----------~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
+.|... .+.+|.. +.++..+.||+++||..||++|++ .+|+|.||||
T Consensus 212 y~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~s----c~qll~H~yF 287 (396)
T KOG0593|consen 212 YLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLS----CEQLLHHPYF 287 (396)
T ss_pred HHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCcccccc----HHHHhcChHH
Confidence 877541 1223322 345677899999999999999999 9999999999
Q ss_pred cCCCcc
Q 002051 932 KGVNWA 937 (975)
Q Consensus 932 ~~~~~~ 937 (975)
.++--.
T Consensus 288 d~~~er 293 (396)
T KOG0593|consen 288 DGFIER 293 (396)
T ss_pred HHHHHH
Confidence 654333
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-43 Score=416.69 Aligned_cols=266 Identities=39% Similarity=0.709 Sum_probs=234.4
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhcccc---------------------------ccCCeE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN---------------------------KTKTHV 717 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~~~---------------------------~~~~~~ 717 (975)
.+..++|.+++.||+|+||.|.+++++.|++.||+|+++|..++.+. ++++|+
T Consensus 71 rl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~L 150 (1317)
T KOG0612|consen 71 RLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYL 150 (1317)
T ss_pred hCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccce
Confidence 46678999999999999999999999999999999999986544322 388999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|+|||||+||+|..+|.+.. .++++.+++|+..|+.||.-||+.|+|||||||+|||++..|++||+|||.+-.++.+
T Consensus 151 YlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~d 228 (1317)
T KOG0612|consen 151 YLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDAD 228 (1317)
T ss_pred EEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCC
Confidence 99999999999999998863 7999999999999999999999999999999999999999999999999988665432
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-----CCCCChhHHHHHHHHHHHHHhCCCCCC
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFR 872 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~~~k~DIWSLG~il~ell~G~~Pf~ 872 (975)
+ .-.+...+|||.|.+||++.. +.|+..||.||+|+++|||++|..||+
T Consensus 229 G--------------------------~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFY 282 (1317)
T KOG0612|consen 229 G--------------------------TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFY 282 (1317)
T ss_pred C--------------------------cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcch
Confidence 2 233456799999999999952 458889999999999999999999999
Q ss_pred CCCHHHHHHHHHhc--CCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhccCCCCCCCC
Q 002051 873 GKTRQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAP 950 (975)
Q Consensus 873 ~~~~~~~~~~i~~~--~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~~~~~~~~~p 950 (975)
..+-.+.+-+|++- .+.||....+|.++++||+++|. +|+.|.+ +..++++..||||.+++|..++...||-+ |
T Consensus 283 adslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLg-rngiedik~HpFF~g~~W~~iR~~~pP~v--P 358 (1317)
T KOG0612|consen 283 ADSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLG-RNGIEDIKNHPFFEGIDWDNIRESVPPVV--P 358 (1317)
T ss_pred HHHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhc-Chhhhcc-cccHHHHHhCccccCCChhhhhhcCCCCC--C
Confidence 99999999999875 77888777799999999999986 8889998 56799999999999999999999999955 7
Q ss_pred CcccCccccccc
Q 002051 951 LFATDTEKEYKV 962 (975)
Q Consensus 951 ~~~~~~~~~~~~ 962 (975)
.++++.+-..+.
T Consensus 359 evssd~DTsnFd 370 (1317)
T KOG0612|consen 359 EVSSDDDTSNFD 370 (1317)
T ss_pred cCCCCCcccccc
Confidence 777776655443
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=376.17 Aligned_cols=237 Identities=29% Similarity=0.485 Sum_probs=204.6
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc--------------------------cccccCC-eEE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--------------------------NRNKTKT-HVC 718 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~--------------------------~~~~~~~-~~~ 718 (975)
+.+++|.++++||.|+||.||+|+.+.+|..||||.|++.... +...+++ ++|
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~ 86 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY 86 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence 4578999999999999999999999999999999999875311 0111344 999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
+||||| ..+|+++++.+ ...|++..++.|++||++||+|+|.+|+.|||+||+|||+..+..+||+|||+|+.....+
T Consensus 87 fVfE~M-d~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Skp 164 (538)
T KOG0661|consen 87 FVFEFM-DCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKP 164 (538)
T ss_pred eeHHhh-hhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccCC
Confidence 999999 78999999987 7899999999999999999999999999999999999999999999999999998765432
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
+.+.++.|.+|+|||+++. ..|+.+.||||+|||++|+++-++.|.|.++.
T Consensus 165 ----------------------------PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~ 216 (538)
T KOG0661|consen 165 ----------------------------PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEI 216 (538)
T ss_pred ----------------------------CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHH
Confidence 3356789999999999865 56889999999999999999999999999999
Q ss_pred HHHHHHHh-------------------cCCCCCCC---------CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCC
Q 002051 878 KTFANILH-------------------KDLKFPSS---------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 929 (975)
Q Consensus 878 ~~~~~i~~-------------------~~~~~p~~---------~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp 929 (975)
+.+.+|+. -.+.+|.. ...+.++.++|.+||.+||++||| |+|+|+||
T Consensus 217 Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpT----A~~al~~p 292 (538)
T KOG0661|consen 217 DQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPT----ASQALQHP 292 (538)
T ss_pred HHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCcc----HHHHhcCc
Confidence 99999875 12333322 346889999999999999999999 99999999
Q ss_pred CccCCCc
Q 002051 930 FFKGVNW 936 (975)
Q Consensus 930 ~f~~~~~ 936 (975)
||..-.-
T Consensus 293 ffq~~~~ 299 (538)
T KOG0661|consen 293 FFQVGRA 299 (538)
T ss_pred ccccccc
Confidence 9985433
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-42 Score=384.80 Aligned_cols=256 Identities=30% Similarity=0.513 Sum_probs=219.7
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch---------------------------hccccccCCeEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV---------------------------MLNRNKTKTHVCLI 720 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~---------------------------~~~~~~~~~~~~lV 720 (975)
.+-|++.+.||.|+.|.|-+|+|..||+.+|||++.+.. +++...++.++|+|
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence 456899999999999999999999999999999998762 22333488999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 800 (975)
+||++||.|++++..+ +.+++.++.++++||+.|+.|||..+|+||||||+|+|++.++++||+|||+|..-.
T Consensus 91 lEyv~gGELFdylv~k--G~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~----- 163 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRK--GPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEV----- 163 (786)
T ss_pred EEecCCchhHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeeccc-----
Confidence 9999999999999886 679999999999999999999999999999999999999999999999999995422
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCC-ChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT-SAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~-~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
+.....+.||+|.|.|||++.|.+|. .++||||.|+|||.|++|+.||++.+-..+
T Consensus 164 -----------------------~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~L 220 (786)
T KOG0588|consen 164 -----------------------PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVL 220 (786)
T ss_pred -----------------------CCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHH
Confidence 12233467999999999999999985 699999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhccCCCC--CCCCCcccCcc
Q 002051 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPE--LDAPLFATDTE 957 (975)
Q Consensus 880 ~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~~~~~~--~~~p~~~~~~~ 957 (975)
+.++.++.+.+|. .++.++++||++||..||.+|+| .+||++|||+.+.+-...-...++. ++++.+.+..+
T Consensus 221 LlKV~~G~f~MPs--~Is~eaQdLLr~ml~VDp~~RiT----~~eI~kHP~l~g~~~~~~~~~~~~~~~~~i~s~ps~~~ 294 (786)
T KOG0588|consen 221 LLKVQRGVFEMPS--NISSEAQDLLRRMLDVDPSTRIT----TEEILKHPFLSGYTSLPSSKSLRPPVSVPILSIPSIQE 294 (786)
T ss_pred HHHHHcCcccCCC--cCCHHHHHHHHHHhccCcccccc----HHHHhhCchhhcCCCCChhhhcCCCcccceeecCCccc
Confidence 9999999999885 48999999999999999999999 9999999999987665544333332 23444444444
Q ss_pred cc
Q 002051 958 KE 959 (975)
Q Consensus 958 ~~ 959 (975)
.+
T Consensus 295 ID 296 (786)
T KOG0588|consen 295 ID 296 (786)
T ss_pred CC
Confidence 33
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-42 Score=365.32 Aligned_cols=234 Identities=28% Similarity=0.500 Sum_probs=203.0
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------------------hccccccCCeEEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------------------MLNRNKTKTHVCLIT 721 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------------~~~~~~~~~~~~lV~ 721 (975)
.++|.+.++||+|+||+||+|+++.++..||||.+.+.. +++.....+++||||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 568999999999999999999999999999999987663 122333788999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC------CcEEEeeccCCCccC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN------GHVSLTDFDLSCLTS 795 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~------g~vkL~DFG~a~~~~ 795 (975)
|||.||+|.+||.++ +.+++..++.++.||+.||++||+++||||||||+|||++.+ -.+||+|||+|+.+.
T Consensus 89 EyC~gGDLs~yi~~~--~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~ 166 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRR--GRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQ 166 (429)
T ss_pred EeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCC
Confidence 999999999999986 579999999999999999999999999999999999999865 358999999998765
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
.. ....+.||+|.|||||++....|+.|+|+||+|+++|+|++|++||...+
T Consensus 167 ~~----------------------------~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t 218 (429)
T KOG0595|consen 167 PG----------------------------SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET 218 (429)
T ss_pred ch----------------------------hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence 21 23457899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCC-CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCC
Q 002051 876 RQKTFANILHKDLKFPSS-TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935 (975)
Q Consensus 876 ~~~~~~~i~~~~~~~p~~-~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~ 935 (975)
..+.+..+..+....|.. ...+..+.+|+...|+.+|..|.+ ..+-+.|++...-.
T Consensus 219 ~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~----~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 219 PKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRIS----FEDFFDHPFLAANP 275 (429)
T ss_pred HHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCc----hHHhhhhhhcccCc
Confidence 999988777665444433 335667789999999999999999 88888898886543
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-42 Score=373.73 Aligned_cols=230 Identities=34% Similarity=0.557 Sum_probs=208.9
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------------------hccccccCCeEEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------------------MLNRNKTKTHVCLIT 721 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------------~~~~~~~~~~~~lV~ 721 (975)
+++|.+...||+|+||.||+++.+.|.+.||||.+.|.. ++..+++..++++|+
T Consensus 1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt 80 (808)
T KOG0597|consen 1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT 80 (808)
T ss_pred CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence 468999999999999999999999999999999987642 455666899999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
|||.| +|+.++... +.++++.++.++++++.||.|||+++|+|||+||.|||+..+|.+|+||||+|+.++.+
T Consensus 81 e~a~g-~L~~il~~d--~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~---- 153 (808)
T KOG0597|consen 81 EYAVG-DLFTILEQD--GKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN---- 153 (808)
T ss_pred hhhhh-hHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccC----
Confidence 99966 999999886 56999999999999999999999999999999999999999999999999999876532
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~ 881 (975)
.....+..|||.|||||++.+.+|+..+|+|||||++||++.|++||...+-.....
T Consensus 154 -----------------------t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~ 210 (808)
T KOG0597|consen 154 -----------------------TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVK 210 (808)
T ss_pred -----------------------ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHH
Confidence 223446789999999999999999999999999999999999999999988888888
Q ss_pred HHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 882 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 882 ~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
.|......+|. ..|..+++||+.+|.+||.+|+| +.+++.|||+++
T Consensus 211 ~I~~d~v~~p~--~~S~~f~nfl~gLL~kdP~~Rlt----W~~Ll~HpF~k~ 256 (808)
T KOG0597|consen 211 SILKDPVKPPS--TASSSFVNFLQGLLIKDPAQRLT----WTDLLGHPFWKG 256 (808)
T ss_pred HHhcCCCCCcc--cccHHHHHHHHHHhhcChhhccc----HHHHhcChHHhh
Confidence 89888877776 57899999999999999999999 999999999875
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-41 Score=377.19 Aligned_cols=234 Identities=35% Similarity=0.654 Sum_probs=208.0
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhccc------------------------------cccCC
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR------------------------------NKTKT 715 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~~------------------------------~~~~~ 715 (975)
...+.|.+.+.||.|+||.|++|.+..++..||+|++++...... .....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 456799999999999999999999999999999998877522100 01566
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC-CcEEEeeccCCCcc
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLT 794 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~-g~vkL~DFG~a~~~ 794 (975)
++|+|||||.||+|++++.. .+.+.+..++.+++||+.||+|||++||+||||||+|||++.+ +++||+|||++...
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~ 171 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAIS 171 (370)
T ss_pred eEEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEecccccccc
Confidence 79999999999999999988 4679999999999999999999999999999999999999999 99999999999654
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC-CC-ChhHHHHHHHHHHHHHhCCCCCC
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HT-SAVDWWALGILLYEMLYGYTPFR 872 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~~-~k~DIWSLG~il~ell~G~~Pf~ 872 (975)
. .......+.|||+.|+|||++.+.. |+ .++||||+|++||.|++|+.||.
T Consensus 172 ~---------------------------~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~ 224 (370)
T KOG0583|consen 172 P---------------------------GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFD 224 (370)
T ss_pred C---------------------------CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCC
Confidence 2 0112345789999999999999977 75 68999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 873 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 873 ~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
..+...++..|.++.+.+|.... |+++++||.+||..||.+|+| +.+|+.||||+.
T Consensus 225 d~~~~~l~~ki~~~~~~~p~~~~-S~~~~~Li~~mL~~~P~~R~t----~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 225 DSNVPNLYRKIRKGEFKIPSYLL-SPEARSLIEKMLVPDPSTRIT----LLEILEHPWFQK 280 (370)
T ss_pred CccHHHHHHHHhcCCccCCCCcC-CHHHHHHHHHHcCCCcccCCC----HHHHhhChhhcc
Confidence 99999999999999988888755 999999999999999999999 999999999996
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-42 Score=347.81 Aligned_cols=225 Identities=28% Similarity=0.445 Sum_probs=194.7
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc--------------------------c-ccc-cCCeEE
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--------------------------N-RNK-TKTHVC 718 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~--------------------------~-~~~-~~~~~~ 718 (975)
...+|+++++||+|+||+||++.+..+|+.+|.|.+.-..+. . .+. ++.-++
T Consensus 17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evln 96 (375)
T KOG0591|consen 17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLN 96 (375)
T ss_pred cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhH
Confidence 455799999999999999999999999999999987643211 0 111 334489
Q ss_pred EEEeccCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHH--CC--CeecCCCCCCEEEecCCcEEEeeccCCC
Q 002051 719 LITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHC--QG--IIYRDLKPENVLLQGNGHVSLTDFDLSC 792 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qIl~aL~yLH~--~g--IiHrDIKp~NILl~~~g~vkL~DFG~a~ 792 (975)
||||||.+|+|..++++ .....+++..+++++.|+|.||..||+ .+ |+||||||.||+++.+|.+||+|||+++
T Consensus 97 ivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r 176 (375)
T KOG0591|consen 97 IVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGR 176 (375)
T ss_pred HHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHh
Confidence 99999999999999975 345679999999999999999999999 45 9999999999999999999999999998
Q ss_pred ccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCC
Q 002051 793 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 872 (975)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~ 872 (975)
.+..+ .....+++|||.||+||.+.+.+|+.++||||+||++|||..-.+||.
T Consensus 177 ~l~s~---------------------------~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~ 229 (375)
T KOG0591|consen 177 FLSSK---------------------------TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFY 229 (375)
T ss_pred Hhcch---------------------------hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcc
Confidence 76532 123457899999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCC
Q 002051 873 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS 918 (975)
Q Consensus 873 ~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~ 918 (975)
+.+..+.-.+|.+++++.-.....|.++..||..|+..||+.||+.
T Consensus 230 g~n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 230 GDNLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred cccHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCc
Confidence 9999999999999876533335688999999999999999999983
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-41 Score=371.87 Aligned_cols=231 Identities=29% Similarity=0.479 Sum_probs=205.8
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEEec
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITDY 723 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~Ey 723 (975)
...|....+||+|+.|.||.|+...+++.||||.|.... +++.+.-.+.+++||||
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy 351 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY 351 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence 457899999999999999999999999999999987642 12222356889999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
|+||+|.|++.. ..++|.++..|++++|+||+|||.+||+|||||.+|||++.+|.+||+|||++..+...
T Consensus 352 m~ggsLTDvVt~---~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~------ 422 (550)
T KOG0578|consen 352 MEGGSLTDVVTK---TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEE------ 422 (550)
T ss_pred cCCCchhhhhhc---ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccc------
Confidence 999999999976 56999999999999999999999999999999999999999999999999999765422
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i 883 (975)
.....+.+|||+|||||++....|+.++||||||++++||+-|.+||...++...++.|
T Consensus 423 ---------------------~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLI 481 (550)
T KOG0578|consen 423 ---------------------QSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI 481 (550)
T ss_pred ---------------------cCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHH
Confidence 12345789999999999999999999999999999999999999999998888888777
Q ss_pred Hh-cCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCcc
Q 002051 884 LH-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932 (975)
Q Consensus 884 ~~-~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~ 932 (975)
.. +...+.....+|+.+++||.+||+.|+.+|++ |.|||+||||+
T Consensus 482 a~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~Ras----A~eLL~HpFl~ 527 (550)
T KOG0578|consen 482 ATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRAS----AKELLEHPFLK 527 (550)
T ss_pred hhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCC----HHHHhcChhhh
Confidence 64 56667777889999999999999999999999 99999999994
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-41 Score=363.73 Aligned_cols=241 Identities=34% Similarity=0.583 Sum_probs=205.0
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhcccc--------------------------------
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN-------------------------------- 711 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~~~-------------------------------- 711 (975)
....+++|++++.||+|.||.|.+|++..+++.||||++.+.......
T Consensus 92 ~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV 171 (576)
T KOG0585|consen 92 DRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVV 171 (576)
T ss_pred cceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCee
Confidence 345578999999999999999999999999999999999876422111
Q ss_pred --------ccCCeEEEEEeccCCCCHHHHHhhCCCCC-CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc
Q 002051 712 --------KTKTHVCLITDYCPGGELFLLLDRQPTKV-LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 782 (975)
Q Consensus 712 --------~~~~~~~lV~Ey~~ggsL~~~l~~~~~~~-l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~ 782 (975)
...+++|||+|||..|.+...-.. +. +++.++++|++.++.||+|||.+|||||||||+|+|++.+|+
T Consensus 172 ~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d---~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 172 KLIEVLDDPESDKLYLVLEYCSKGEVKWCPPD---KPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred EEEEeecCcccCceEEEEEeccCCccccCCCC---cccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCc
Confidence 056789999999988887654322 33 899999999999999999999999999999999999999999
Q ss_pred EEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC----CCChhHHHHHH
Q 002051 783 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALG 858 (975)
Q Consensus 783 vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~----~~~k~DIWSLG 858 (975)
|||+|||.+..+...... .........+|||.|+|||.+.+.. .+.+.||||+|
T Consensus 249 VKIsDFGVs~~~~~~~~~----------------------~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalG 306 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDE----------------------GSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALG 306 (576)
T ss_pred EEeeccceeeecccCCcc----------------------ccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhh
Confidence 999999999765322100 0001112368999999999998732 35689999999
Q ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 859 ILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 859 ~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
++||+|+.|+.||.+....+.+.+|++..+.+|....++..++|||.+||++||++|++ +.+|..|||...
T Consensus 307 VTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~----l~~ik~Hpwvt~ 377 (576)
T KOG0585|consen 307 VTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRIT----LPDIKLHPWVTR 377 (576)
T ss_pred hhHHHhhhccCCcccchHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheee----hhhheecceecc
Confidence 99999999999999999999999999999999999889999999999999999999999 999999999863
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-40 Score=331.71 Aligned_cols=235 Identities=26% Similarity=0.475 Sum_probs=199.6
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------------------hccccccCCeEEEEEe
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------------------MLNRNKTKTHVCLITD 722 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------------~~~~~~~~~~~~lV~E 722 (975)
.+|..+++||+|.||.||+|++..||+.||||.++... +++.+.....+.||+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 57999999999999999999999999999999987653 1222336778899999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
|| .-+|...++.. ...++...++.++.++++||+|||++.|+||||||.|+|++.+|.+||+|||+|+.+.....
T Consensus 82 fm-~tdLe~vIkd~-~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~--- 156 (318)
T KOG0659|consen 82 FM-PTDLEVVIKDK-NIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR--- 156 (318)
T ss_pred ec-cccHHHHhccc-ccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCc---
Confidence 99 55999999764 56899999999999999999999999999999999999999999999999999988763321
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~ 881 (975)
.....+-|.+|+|||.+.|. .|+..+||||.||++.||+.|.+.|.|.+..+++.
T Consensus 157 ------------------------~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~ 212 (318)
T KOG0659|consen 157 ------------------------IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLS 212 (318)
T ss_pred ------------------------ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHH
Confidence 22233789999999999885 58899999999999999999999999999999998
Q ss_pred HHHhcC-----CC---------------CCC------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCC
Q 002051 882 NILHKD-----LK---------------FPS------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935 (975)
Q Consensus 882 ~i~~~~-----~~---------------~p~------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~ 935 (975)
.|.+-- -. +|. .+..+.++.||+.+||.+||.+|+| +.|+|+|+||++..
T Consensus 213 ~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rit----a~qaL~~~yf~~~P 288 (318)
T KOG0659|consen 213 KIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRIT----ASQALKHPYFKSLP 288 (318)
T ss_pred HHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhccc----HHHHhcchhhhcCC
Confidence 887610 01 111 1345678899999999999999999 99999999999754
Q ss_pred c
Q 002051 936 W 936 (975)
Q Consensus 936 ~ 936 (975)
.
T Consensus 289 ~ 289 (318)
T KOG0659|consen 289 L 289 (318)
T ss_pred C
Confidence 4
|
|
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-41 Score=362.51 Aligned_cols=258 Identities=36% Similarity=0.633 Sum_probs=220.8
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc---------------------------cccccCCe
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML---------------------------NRNKTKTH 716 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~---------------------------~~~~~~~~ 716 (975)
..+..+.|+.-+.||+|+||.||-|+-+.||+.||+|.+.+..+. ..+.+++.
T Consensus 180 qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~ 259 (591)
T KOG0986|consen 180 QPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDA 259 (591)
T ss_pred hhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCc
Confidence 456778899999999999999999999999999999998776422 12237889
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
+|+||..|+||+|.-+|.+.+...|++..++.++.+|+.||++||+.+||.|||||+|||+|+.|+|+|+|+|+|..+..
T Consensus 260 LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 260 LCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred eEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 99999999999999999888778899999999999999999999999999999999999999999999999999977542
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 876 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~ 876 (975)
.. .....+||..|||||++.+..|+...|.|||||++|+|+.|+.||.....
T Consensus 340 g~----------------------------~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~Ke 391 (591)
T KOG0986|consen 340 GK----------------------------PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKE 391 (591)
T ss_pred CC----------------------------ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhh
Confidence 21 12234899999999999999999999999999999999999999976432
Q ss_pred ----HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhc--cCCCCCCC
Q 002051 877 ----QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC--MNPPELDA 949 (975)
Q Consensus 877 ----~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~--~~~~~~~~ 949 (975)
.++-+.++.....++ ...|+++++|++.+|.+||.+|+.++ +.++++.+||||+.++|.++.. ..||.++-
T Consensus 392 Kvk~eEvdrr~~~~~~ey~--~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rleagml~PPfiPd 469 (591)
T KOG0986|consen 392 KVKREEVDRRTLEDPEEYS--DKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRLEAGMLEPPFIPD 469 (591)
T ss_pred hhhHHHHHHHHhcchhhcc--cccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHHhccCCCCCCCCC
Confidence 344445555555555 45899999999999999999999998 7899999999999999998855 55555544
Q ss_pred CC
Q 002051 950 PL 951 (975)
Q Consensus 950 p~ 951 (975)
|.
T Consensus 470 p~ 471 (591)
T KOG0986|consen 470 PG 471 (591)
T ss_pred cc
Confidence 43
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=350.51 Aligned_cols=261 Identities=35% Similarity=0.672 Sum_probs=228.0
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhcccc----------------------------ccCC
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN----------------------------KTKT 715 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~~~----------------------------~~~~ 715 (975)
..+...+|.++.+||+|+||.|.++..+.+.+.||||++++.+++... +.-+
T Consensus 344 d~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmD 423 (683)
T KOG0696|consen 344 DRIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMD 423 (683)
T ss_pred cceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhh
Confidence 357788999999999999999999999999999999999988654332 2567
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
.+|+||||++||+|...|+.. +.+.+..+..++..|+-||-|||++|||.||||.+|||++..|++||+|||+++.-.
T Consensus 424 RLyFVMEyvnGGDLMyhiQQ~--GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni 501 (683)
T KOG0696|consen 424 RLYFVMEYVNGGDLMYHIQQV--GKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 501 (683)
T ss_pred heeeEEEEecCchhhhHHHHh--cccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccc
Confidence 899999999999999999875 669999999999999999999999999999999999999999999999999985421
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
. ......++||||.|+|||++...+|+..+|.||+|++||||+.|++||.+.+
T Consensus 502 ~---------------------------~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeD 554 (683)
T KOG0696|consen 502 F---------------------------DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED 554 (683)
T ss_pred c---------------------------CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCC
Confidence 1 1123467999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhccCCCCCCCCCccc
Q 002051 876 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPLFAT 954 (975)
Q Consensus 876 ~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~ 954 (975)
..++++.|......+|.. +|.++.++++.+|.+.|.+|+.+- +.-.+|..||||+.+||.++....-+....|.+..
T Consensus 555 E~elF~aI~ehnvsyPKs--lSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~eiqPPfkPk~k~ 632 (683)
T KOG0696|consen 555 EDELFQAIMEHNVSYPKS--LSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERREIQPPFKPKIKC 632 (683)
T ss_pred HHHHHHHHHHccCcCccc--ccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhccCCCCCCCcccc
Confidence 999999999998888775 789999999999999999999875 34578999999999999988554433334566543
Q ss_pred C
Q 002051 955 D 955 (975)
Q Consensus 955 ~ 955 (975)
.
T Consensus 633 ~ 633 (683)
T KOG0696|consen 633 G 633 (683)
T ss_pred C
Confidence 3
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=360.06 Aligned_cols=251 Identities=41% Similarity=0.714 Sum_probs=211.9
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV~ 721 (975)
++|++++.||+|+||.||+|.++.+++.||+|++..... .....+..++|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 479999999999999999999999999999999864321 11122667899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
||+++|+|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 81 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~----- 153 (291)
T cd05612 81 EYVPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD----- 153 (291)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccC-----
Confidence 999999999999774 5689999999999999999999999999999999999999999999999999854321
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~ 881 (975)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+.
T Consensus 154 -------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~ 208 (291)
T cd05612 154 -------------------------RTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYE 208 (291)
T ss_pred -------------------------CcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 1123578999999999999999999999999999999999999999998888888
Q ss_pred HHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhccCCCCCCCCCcc
Q 002051 882 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPLFA 953 (975)
Q Consensus 882 ~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~ 953 (975)
.+......+|.. .+..+++||++||+.||.+|+++. ..+++++.||||+.++|..+..........|.+.
T Consensus 209 ~i~~~~~~~~~~--~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~p~~~ 279 (291)
T cd05612 209 KILAGKLEFPRH--LDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWDDVPQRKLKPPIVPKVS 279 (291)
T ss_pred HHHhCCcCCCcc--CCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCHHHHhcCCCCCCEeCCCC
Confidence 888877666543 588999999999999999999532 3599999999999999987754433333345444
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=338.02 Aligned_cols=234 Identities=30% Similarity=0.501 Sum_probs=204.7
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhcc--------------------------ccccCCeEEEE
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN--------------------------RNKTKTHVCLI 720 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~--------------------------~~~~~~~~~lV 720 (975)
-.+.|.+-..||+|.|+.|++|.+..||+.||+|+++...+.. ......+.|||
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 3567999999999999999999999999999999887554322 22256788999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC---CcEEEeeccCCCccCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~---g~vkL~DFG~a~~~~~~ 797 (975)
+|+|.|++|..-|-.+ ..+++..+..+++||++||.|||.+||||||+||.|+|+-.. .-+||+|||+|...+.
T Consensus 89 Fe~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~- 165 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND- 165 (355)
T ss_pred EecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCC-
Confidence 9999999997655543 568999999999999999999999999999999999999643 3599999999976541
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
......++|||.|||||++...+|+.++|||+.|++||-|+.|.+||.+.+..
T Consensus 166 ---------------------------g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~ 218 (355)
T KOG0033|consen 166 ---------------------------GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 218 (355)
T ss_pred ---------------------------ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH
Confidence 12334578999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCC--CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 878 KTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~--~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
.++++|..+.+.+|. ...+++++++|+++||..||.+|+| +.|.|+|||+.+-
T Consensus 219 rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIt----a~EAL~HpWi~~r 273 (355)
T KOG0033|consen 219 RLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRIT----ADEALKHPWICNR 273 (355)
T ss_pred HHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhcc----HHHHhCCchhcch
Confidence 999999999887765 4779999999999999999999999 9999999999854
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-40 Score=342.33 Aligned_cols=237 Identities=24% Similarity=0.389 Sum_probs=200.3
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------hccc--------------cccCCeEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------MLNR--------------NKTKTHVCL 719 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------~~~~--------------~~~~~~~~l 719 (975)
.+.|+.+.+|++|+||.||+|+++.|++.||+|.++-.. ++.. ..+-+.+||
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 468999999999999999999999999999999876432 0000 014567999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
||||| ..+|..++...+ ..|...+++.++.|++.||+|||.+.|+||||||+|+|++..|.+||+|||+|+.++...
T Consensus 155 VMe~~-EhDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~- 231 (419)
T KOG0663|consen 155 VMEYV-EHDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL- 231 (419)
T ss_pred eHHHH-HhhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCc-
Confidence 99999 559999998864 579999999999999999999999999999999999999999999999999998876331
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~ 878 (975)
...+..+-|.+|+|||.+++. .|+.++|+||+|||+.||+++++.|.|.+..+
T Consensus 232 --------------------------k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~d 285 (419)
T KOG0663|consen 232 --------------------------KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEID 285 (419)
T ss_pred --------------------------ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHH
Confidence 233456789999999999985 58899999999999999999999999999999
Q ss_pred HHHHHHhc-------------------CCCCCCC-----------CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 879 TFANILHK-------------------DLKFPSS-----------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 879 ~~~~i~~~-------------------~~~~p~~-----------~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
++.+|.+. ...++.. ..++....+|+..+|.+||.+|+| |.+.|+|
T Consensus 286 Ql~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~t----A~~~L~h 361 (419)
T KOG0663|consen 286 QLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRIT----AEDGLKH 361 (419)
T ss_pred HHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCcccccc----HHHhhcc
Confidence 99988761 1111110 115578899999999999999999 9999999
Q ss_pred CCccCCCcc
Q 002051 929 PFFKGVNWA 937 (975)
Q Consensus 929 p~f~~~~~~ 937 (975)
+||.+....
T Consensus 362 ~~F~e~P~p 370 (419)
T KOG0663|consen 362 EYFRETPLP 370 (419)
T ss_pred cccccCCCC
Confidence 999986544
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-40 Score=327.53 Aligned_cols=234 Identities=35% Similarity=0.589 Sum_probs=213.0
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc---------------------------cccccCCeE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML---------------------------NRNKTKTHV 717 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~---------------------------~~~~~~~~~ 717 (975)
....++|.+.+.||+|.||.||+|+.+.++-.||+|++.++.+. ..+.+...+
T Consensus 18 ~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~ri 97 (281)
T KOG0580|consen 18 TWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRI 97 (281)
T ss_pred ccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecccee
Confidence 45678999999999999999999999999999999999876532 223367889
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
||++||.++|+|+..|.......+++.....+++|++.||.|||.++||||||||+|+|++..|.+|++|||.+...+
T Consensus 98 yLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p-- 175 (281)
T KOG0580|consen 98 YLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-- 175 (281)
T ss_pred EEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecC--
Confidence 999999999999999997667889999999999999999999999999999999999999999999999999984432
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
.....+.|||..|.+||...+..++..+|+|++|++.||++.|.+||...+..
T Consensus 176 ---------------------------~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~ 228 (281)
T KOG0580|consen 176 ---------------------------SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS 228 (281)
T ss_pred ---------------------------CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH
Confidence 23446789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
+.+++|.+..+.+| ..++..+.|+|.+||.++|.+|.+ ..|++.|||+..
T Consensus 229 etYkrI~k~~~~~p--~~is~~a~dlI~~ll~~~p~~r~~----l~~v~~hpwI~a 278 (281)
T KOG0580|consen 229 ETYKRIRKVDLKFP--STISGGAADLISRLLVKNPIERLA----LTEVMDHPWIVA 278 (281)
T ss_pred HHHHHHHHccccCC--cccChhHHHHHHHHhccCcccccc----HHHHhhhHHHHh
Confidence 99999999988888 458999999999999999999999 999999999864
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=365.55 Aligned_cols=242 Identities=40% Similarity=0.762 Sum_probs=209.7
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVC 718 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~ 718 (975)
...++|.+.+.||+|+||.||+|+++.+++.||+|++.+... .......+++|
T Consensus 15 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 94 (329)
T PTZ00263 15 WKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVY 94 (329)
T ss_pred CCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEE
Confidence 456789999999999999999999999999999999865421 11122667899
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
+|||||.||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 95 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~-- 170 (329)
T PTZ00263 95 FLLEFVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD-- 170 (329)
T ss_pred EEEcCCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCC--
Confidence 999999999999999874 5689999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~ 878 (975)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+...
T Consensus 171 ----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~ 222 (329)
T PTZ00263 171 ----------------------------RTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR 222 (329)
T ss_pred ----------------------------CcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH
Confidence 1123579999999999999999999999999999999999999999988888
Q ss_pred HHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCC-hhhHHHHHcCCCccCCCcchhhc
Q 002051 879 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWALVRC 941 (975)
Q Consensus 879 ~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~-~~~~~elL~Hp~f~~~~~~~~~~ 941 (975)
.+..+..+...+|. .++..+++||++||+.||.+|+++ .+.+++|+.||||++.+|..+..
T Consensus 223 ~~~~i~~~~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~~~~~~ 284 (329)
T PTZ00263 223 IYEKILAGRLKFPN--WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWDKLYA 284 (329)
T ss_pred HHHHHhcCCcCCCC--CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCCHHHHHh
Confidence 88888877666554 478899999999999999999973 24589999999999999987643
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=364.25 Aligned_cols=236 Identities=43% Similarity=0.782 Sum_probs=201.1
Q ss_pred cccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEEEeccCCC
Q 002051 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLITDYCPGG 727 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV~Ey~~gg 727 (975)
+.||+|+||.||+|+++.+|+.||||++++... ........++||||||++|+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 469999999999999999999999999875421 11122677899999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchh
Q 002051 728 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 807 (975)
Q Consensus 728 sL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 807 (975)
+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~---------- 148 (323)
T cd05571 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD---------- 148 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC----------
Confidence 999999764 56899999999999999999999999999999999999999999999999998542110
Q ss_pred hhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC
Q 002051 808 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 887 (975)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~~ 887 (975)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+....
T Consensus 149 -----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~ 211 (323)
T cd05571 149 -----------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE 211 (323)
T ss_pred -----------------CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC
Confidence 011234579999999999999999999999999999999999999999988888888887776
Q ss_pred CCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhc
Q 002051 888 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC 941 (975)
Q Consensus 888 ~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~ 941 (975)
..+|. .++.++.+||++||++||++||+.. ..+.+|++||||.+++|.....
T Consensus 212 ~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~~~~~~ 264 (323)
T cd05571 212 IRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINWQDVVQ 264 (323)
T ss_pred CCCCC--CCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHh
Confidence 66654 4789999999999999999999321 1299999999999999987753
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-39 Score=366.93 Aligned_cols=268 Identities=35% Similarity=0.637 Sum_probs=207.5
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV~ 721 (975)
++|++++.||+|+||+||+|.++.+++.||||++.+... .....+..++||||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 479999999999999999999999999999999875321 11122567899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
|||+||+|.+++.+. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.........
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~ 158 (363)
T cd05628 81 EFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTE 158 (363)
T ss_pred cCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccc
Confidence 999999999999874 569999999999999999999999999999999999999999999999999987643211100
Q ss_pred CCcchhhhhc-cCCC-------CCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCC
Q 002051 802 LPTTNEKKRR-HKGQ-------QNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 873 (975)
Q Consensus 802 ~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~ 873 (975)
.......... .... ................+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 159 FYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred ccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence 0000000000 0000 0000000000112346899999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhc--CCCCCCCCCCcHHHHHHHHHhcccCcccc---CCChhhHHHHHcCCCccCCCcchhhccC
Q 002051 874 KTRQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSR---LGSHEGANEIKKHPFFKGVNWALVRCMN 943 (975)
Q Consensus 874 ~~~~~~~~~i~~~--~~~~p~~~~~s~~~~~li~~~L~~dP~~R---~t~~~~~~elL~Hp~f~~~~~~~~~~~~ 943 (975)
.+..+.+.++... ...+|....++.++++||.+|+. +|.+| |+ ++||++||||++++|..+....
T Consensus 239 ~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~----~~ei~~hp~f~~~~~~~~~~~~ 308 (363)
T cd05628 239 ETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPG----VEEIKTNPFFEGVDWEHIRERP 308 (363)
T ss_pred CCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCC----HHHHhCCCCCCCCCHHHHHhCC
Confidence 8888888888763 45566656688999999999875 56655 56 9999999999999999886543
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-40 Score=371.20 Aligned_cols=233 Identities=29% Similarity=0.495 Sum_probs=199.2
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-----------------------------hccccccCCeEEEE
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-----------------------------MLNRNKTKTHVCLI 720 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-----------------------------~~~~~~~~~~~~lV 720 (975)
+|.+++.||+|+||+|.+|.+..|++.||||+++... +++.+...+|+|||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciV 266 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIV 266 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeee
Confidence 8999999999999999999999999999999998652 23334478899999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC--cEEEeeccCCCccCCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG--HVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g--~vkL~DFG~a~~~~~~~ 798 (975)
+|.+ +-+|+++++.+....++...++.|+.||+.||.+||+.||||+||||+|||+...+ .|||+|||.|+..+.
T Consensus 267 fELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q-- 343 (586)
T KOG0667|consen 267 FELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQ-- 343 (586)
T ss_pred ehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCC--
Confidence 9999 77999999998888899999999999999999999999999999999999998543 699999999976441
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~ 878 (975)
...+.+.+..|+|||+++|.+|+.+.||||||||++||++|.+.|.|.++.+
T Consensus 344 ----------------------------~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~D 395 (586)
T KOG0667|consen 344 ----------------------------RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYD 395 (586)
T ss_pred ----------------------------cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHH
Confidence 1125688999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhc--------------------C--------------------------------CCCC-CCC--------CCc
Q 002051 879 TFANILHK--------------------D--------------------------------LKFP-SST--------PTS 897 (975)
Q Consensus 879 ~~~~i~~~--------------------~--------------------------------~~~p-~~~--------~~s 897 (975)
++..|+.- . ...| ... ...
T Consensus 396 Ql~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~ 475 (586)
T KOG0667|consen 396 QLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADD 475 (586)
T ss_pred HHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccH
Confidence 98887640 0 0011 000 112
Q ss_pred HHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcc
Q 002051 898 LHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 937 (975)
Q Consensus 898 ~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~ 937 (975)
..+.+||++||.+||.+|+| ..++|+||||++....
T Consensus 476 ~~F~dflk~~L~~dP~~R~t----p~qal~Hpfl~~~~~~ 511 (586)
T KOG0667|consen 476 KLFIDFLKRCLEWDPAERIT----PAQALNHPFLTGTSLE 511 (586)
T ss_pred HHHHHHHHHHhccCchhcCC----HHHHhcCccccccccc
Confidence 35789999999999999999 9999999999965443
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-39 Score=364.67 Aligned_cols=256 Identities=35% Similarity=0.658 Sum_probs=212.2
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCC-eEEEEEEeccchh---------------------------ccccccCCe
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSG-QYFAMKAMDKGVM---------------------------LNRNKTKTH 716 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~-~~vAiK~l~~~~~---------------------------~~~~~~~~~ 716 (975)
.+..++|++++.||+|+||.||+|.++.++ ..||+|.+.+... .....+..+
T Consensus 26 ~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~ 105 (340)
T PTZ00426 26 KMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESY 105 (340)
T ss_pred CCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCE
Confidence 456779999999999999999999987665 7899999865321 111225678
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
+|+|||||+||+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 106 ~~lv~Ey~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 106 LYLVLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 99999999999999999874 5699999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 876 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~ 876 (975)
.....+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+.
T Consensus 184 ------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 233 (340)
T PTZ00426 184 ------------------------------RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP 233 (340)
T ss_pred ------------------------------CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH
Confidence 11235799999999999998899999999999999999999999999888
Q ss_pred HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCC-hhhHHHHHcCCCccCCCcchhhccCCCCCCCCCccc
Q 002051 877 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFAT 954 (975)
Q Consensus 877 ~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~-~~~~~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~ 954 (975)
...+..+..+...+|. .++..+.++|++||+.||.+|++. +.+++++++||||++++|.......-+....|.+..
T Consensus 234 ~~~~~~i~~~~~~~p~--~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~~~~~~~~~~~~~p~~~~ 310 (340)
T PTZ00426 234 LLIYQKILEGIIYFPK--FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWVSLLHKNVEVPYKPKYKN 310 (340)
T ss_pred HHHHHHHhcCCCCCCC--CCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCC
Confidence 8888888887766654 468899999999999999999731 123999999999999999876533222223455444
|
|
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-39 Score=361.83 Aligned_cols=242 Identities=36% Similarity=0.701 Sum_probs=206.2
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc----------------------------cccccCCeEEEEE
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML----------------------------NRNKTKTHVCLIT 721 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~----------------------------~~~~~~~~~~lV~ 721 (975)
+|++++.||+|+||.||+|++..+++.||||++.+.... ......+++|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 589999999999999999999999999999998753210 1112567889999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
|||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~---- 154 (324)
T cd05587 81 EYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG---- 154 (324)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC----
Confidence 999999999999764 56899999999999999999999999999999999999999999999999988532110
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~ 881 (975)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+.
T Consensus 155 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~ 211 (324)
T cd05587 155 -----------------------GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQ 211 (324)
T ss_pred -----------------------CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011234579999999999999999999999999999999999999999998888888
Q ss_pred HHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhcc
Q 002051 882 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCM 942 (975)
Q Consensus 882 ~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~~ 942 (975)
.+......+|. .++..+.+||++||.+||.+|++.. ...+++++||||+.++|..+...
T Consensus 212 ~i~~~~~~~~~--~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~~~~~~~ 271 (324)
T cd05587 212 SIMEHNVSYPK--SLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDWEKLERR 271 (324)
T ss_pred HHHcCCCCCCC--CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhC
Confidence 88877665554 4788999999999999999999842 23589999999999999877543
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=353.07 Aligned_cols=239 Identities=32% Similarity=0.490 Sum_probs=195.8
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------hcccc------------cc-C-CeEEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------MLNRN------------KT-K-THVCLIT 721 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------~~~~~------------~~-~-~~~~lV~ 721 (975)
..+|...+.||+|+||.||++.+..+|..+|||.+.... ++... .. . ..++|+|
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM 95 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence 346889999999999999999999999999999877641 00000 01 2 2699999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-CCcEEEeeccCCCccCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~-~g~vkL~DFG~a~~~~~~~~~ 800 (975)
||++||+|.+++.+.++ .+++..++.+.+||++||.|||++|||||||||+|||++. ++.+||+|||+++......
T Consensus 96 Ey~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~-- 172 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG-- 172 (313)
T ss_pred eccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccccc--
Confidence 99999999999998755 7999999999999999999999999999999999999999 7999999999997654200
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCC-CCHHH
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRG-KTRQK 878 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~-~~~~~ 878 (975)
........+.||+.|||||++... ...+++|||||||++.||++|++||.. .....
T Consensus 173 ----------------------~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~ 230 (313)
T KOG0198|consen 173 ----------------------TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAE 230 (313)
T ss_pred ----------------------ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHH
Confidence 011223457899999999999953 334599999999999999999999987 44455
Q ss_pred HHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCC
Q 002051 879 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935 (975)
Q Consensus 879 ~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~ 935 (975)
.+..+.......+.+..+|.++++||.+||.+||++||| |.+||.|||.+...
T Consensus 231 ~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpt----a~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 231 ALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPT----AEELLEHPFLKQNS 283 (313)
T ss_pred HHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcC----HHHHhhChhhhccc
Confidence 555555555333455568999999999999999999999 99999999997643
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-40 Score=361.48 Aligned_cols=285 Identities=34% Similarity=0.616 Sum_probs=228.4
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhcc---------------------------ccccCCeEE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN---------------------------RNKTKTHVC 718 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~---------------------------~~~~~~~~~ 718 (975)
.+..-|..++.||-|+||+|.+++...|...||+|.++|..++. .+.+++++|
T Consensus 626 MdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLY 705 (1034)
T KOG0608|consen 626 MDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLY 705 (1034)
T ss_pred ccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceE
Confidence 44567999999999999999999999999999999998875433 334889999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
+||+|++||++..+|.+. +.|+|+.+++++..+..|+++.|..|+|||||||+|||||.+|++||+|||++.-+.+..
T Consensus 706 FVMdYIPGGDmMSLLIrm--gIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTH 783 (1034)
T KOG0608|consen 706 FVMDYIPGGDMMSLLIRM--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 783 (1034)
T ss_pred EEEeccCCccHHHHHHHh--ccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceecc
Confidence 999999999999999885 779999999999999999999999999999999999999999999999999987765432
Q ss_pred CCC-CCcchhhhhccCCCCCcccc--------------cc-cccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHH
Q 002051 799 QLL-LPTTNEKKRRHKGQQNPVFM--------------AE-PMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 862 (975)
Q Consensus 799 ~~~-~~~~~~~~~~~~~~~~~~~~--------------~~-~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ 862 (975)
... ....++.+..+.... +.+. .. ........+||+.|+|||++....|+..||.||.|+|||
T Consensus 784 dskYYq~gdH~RqDSmep~-~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 784 DSKYYQEGDHHRQDSMEPS-PEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred ccccccCCCccccccCCCc-hhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 211 111111111110000 0000 00 001234578999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHh--cCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhh
Q 002051 863 EMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 940 (975)
Q Consensus 863 ell~G~~Pf~~~~~~~~~~~i~~--~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~ 940 (975)
+|+.|++||...++.+.-.++++ ..+.++....+|.++.+||.+++ .+++.|+. +.+++++..||||+++||..++
T Consensus 863 em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLG-kng~d~vKaHpfFkgIDfsslR 940 (1034)
T KOG0608|consen 863 EMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLG-KNGADQVKAHPFFKGIDFSSLR 940 (1034)
T ss_pred HHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHh-cChhhhhc-ccchhhhhcCccccccchHhhh
Confidence 99999999999888777776654 45667777889999999999875 48999998 5568899999999999999999
Q ss_pred ccCCCCCCCCCcccCcc
Q 002051 941 CMNPPELDAPLFATDTE 957 (975)
Q Consensus 941 ~~~~~~~~~p~~~~~~~ 957 (975)
+..+|-+ |.+.-+++
T Consensus 941 kq~ApYI--P~ItHptD 955 (1034)
T KOG0608|consen 941 KQRAPYI--PRITHPTD 955 (1034)
T ss_pred hccCCcC--ccccCCCc
Confidence 9988855 55444433
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=353.66 Aligned_cols=236 Identities=28% Similarity=0.431 Sum_probs=198.2
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------cccc--------------ccCCeE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------LNRN--------------KTKTHV 717 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------~~~~--------------~~~~~~ 717 (975)
...+.|+.+.+||+|.||.||+|++..+|+.||+|.++.... +... .....+
T Consensus 114 r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~si 193 (560)
T KOG0600|consen 114 RRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSI 193 (560)
T ss_pred cchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceE
Confidence 345689999999999999999999999999999998865421 1100 035689
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|||+||| ..||..++.. +.-.|++.+++.|++||+.||+|||++||+|||||.+||||+.+|.+||+|||+|+.+...
T Consensus 194 YlVFeYM-dhDL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~ 271 (560)
T KOG0600|consen 194 YLVFEYM-DHDLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPS 271 (560)
T ss_pred EEEEecc-cchhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCC
Confidence 9999999 5599998875 3457999999999999999999999999999999999999999999999999999876533
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTR 876 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~~ 876 (975)
.. ...+..+-|.+|+|||.++|. .|+.++|+||+||||.||+.|++.|.+.++
T Consensus 272 ~~--------------------------~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tE 325 (560)
T KOG0600|consen 272 GS--------------------------APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTE 325 (560)
T ss_pred CC--------------------------cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccH
Confidence 21 123456789999999999985 589999999999999999999999999999
Q ss_pred HHHHHHHHhcC----------CCCCC-----------------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCC
Q 002051 877 QKTFANILHKD----------LKFPS-----------------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 929 (975)
Q Consensus 877 ~~~~~~i~~~~----------~~~p~-----------------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp 929 (975)
.+++..|.+.. ..+|. ...++..+.+|+..||..||.+|.| |.++|.|+
T Consensus 326 veQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~t----A~~aL~se 401 (560)
T KOG0600|consen 326 VEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGT----ASSALQSE 401 (560)
T ss_pred HHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCcccccc----HHHHhcCc
Confidence 99999987621 11221 1235677889999999999999999 99999999
Q ss_pred CccC
Q 002051 930 FFKG 933 (975)
Q Consensus 930 ~f~~ 933 (975)
||..
T Consensus 402 yF~t 405 (560)
T KOG0600|consen 402 YFTT 405 (560)
T ss_pred cccc
Confidence 9954
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-39 Score=360.98 Aligned_cols=251 Identities=37% Similarity=0.647 Sum_probs=211.4
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV~ 721 (975)
++|++++.||+|+||.||+|++..+++.||||++.+... ........++||||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 479999999999999999999999999999999875421 11122567899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
|||+|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~----- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT----- 153 (333)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc-----
Confidence 999999999999764 5689999999999999999999999999999999999999999999999999854321
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~ 881 (975)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+.
T Consensus 154 -------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~ 208 (333)
T cd05600 154 -------------------------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWE 208 (333)
T ss_pred -------------------------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHH
Confidence 1234579999999999999999999999999999999999999999988877777
Q ss_pred HHHhcCC--CCCCC----CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhccCCCCCCCCCcccC
Q 002051 882 NILHKDL--KFPSS----TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATD 955 (975)
Q Consensus 882 ~i~~~~~--~~p~~----~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~ 955 (975)
.+..... ..|.. ..++.++.+||.+||..+|.+|++ +.+++.||||+.++|..+....+|. .|.+.++
T Consensus 209 ~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s----~~~ll~h~~~~~~~~~~~~~~~~~~--~~~~~~~ 282 (333)
T cd05600 209 NLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGS----LEDIKNHPFFKEVDWNELRELKPPF--VPELESE 282 (333)
T ss_pred HHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCC----HHHHHhCcccCCCCHHHHhhCCCCC--CCCCCCc
Confidence 6665322 22222 246889999999999999999999 9999999999999999888666654 3655554
Q ss_pred cc
Q 002051 956 TE 957 (975)
Q Consensus 956 ~~ 957 (975)
.+
T Consensus 283 ~~ 284 (333)
T cd05600 283 ID 284 (333)
T ss_pred ch
Confidence 43
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=357.33 Aligned_cols=236 Identities=37% Similarity=0.713 Sum_probs=200.4
Q ss_pred cccccCCceEEEEEEEeCCCeEEEEEEeccchh----------------------------ccccccCCeEEEEEeccCC
Q 002051 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM----------------------------LNRNKTKTHVCLITDYCPG 726 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~----------------------------~~~~~~~~~~~lV~Ey~~g 726 (975)
+.||+|+||.||+|+++.+++.||||++.+... ........++|+|||||+|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 469999999999999999999999999875321 1111256788999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcch
Q 002051 727 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 806 (975)
Q Consensus 727 gsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 806 (975)
|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~--------- 149 (320)
T cd05590 81 GDLMFHIQKS--RRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN--------- 149 (320)
T ss_pred chHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC---------
Confidence 9999998764 56999999999999999999999999999999999999999999999999998542111
Q ss_pred hhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 002051 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 886 (975)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~ 886 (975)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~ 211 (320)
T cd05590 150 ------------------GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND 211 (320)
T ss_pred ------------------CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC
Confidence 01123457999999999999999999999999999999999999999999988888888877
Q ss_pred CCCCCCCCCCcHHHHHHHHHhcccCccccCCChh--hHHHHHcCCCccCCCcchhhc
Q 002051 887 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE--GANEIKKHPFFKGVNWALVRC 941 (975)
Q Consensus 887 ~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~--~~~elL~Hp~f~~~~~~~~~~ 941 (975)
...+|. .++.++.+||++||++||.+|+++.. ..++++.||||++++|..+..
T Consensus 212 ~~~~~~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~~~~~~ 266 (320)
T cd05590 212 EVVYPT--WLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDWEKLNR 266 (320)
T ss_pred CCCCCC--CCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCHHHHHh
Confidence 665554 47889999999999999999999321 238999999999999987644
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=358.23 Aligned_cols=242 Identities=36% Similarity=0.697 Sum_probs=207.5
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc----------------------------cccccCCeEEEEE
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML----------------------------NRNKTKTHVCLIT 721 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~----------------------------~~~~~~~~~~lV~ 721 (975)
+|.+++.||+|+||.||+|.++.+++.||||++.+.... ......+++|+||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 588999999999999999999999999999998754211 1112556789999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
||+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~---- 154 (323)
T cd05616 81 EYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD---- 154 (323)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCC----
Confidence 999999999998764 56899999999999999999999999999999999999999999999999998542210
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~ 881 (975)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+.
T Consensus 155 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~ 211 (323)
T cd05616 155 -----------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ 211 (323)
T ss_pred -----------------------CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011234579999999999999999999999999999999999999999998888888
Q ss_pred HHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhcc
Q 002051 882 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCM 942 (975)
Q Consensus 882 ~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~~ 942 (975)
.+......+|. .++.++.+||.+||++||.+|+++. +...+++.||||+.++|..+...
T Consensus 212 ~i~~~~~~~p~--~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~~~~~~~ 271 (323)
T cd05616 212 SIMEHNVAYPK--SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERK 271 (323)
T ss_pred HHHhCCCCCCC--cCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCCHHHHHhC
Confidence 88887766654 4788999999999999999999853 34689999999999999877543
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=364.05 Aligned_cols=275 Identities=36% Similarity=0.674 Sum_probs=212.0
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV~ 721 (975)
++|++++.||+|+||+||+|++..+++.||||++.+..+ .....+..++||||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 479999999999999999999999999999999875321 11223677899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
|||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..+.......
T Consensus 81 E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (364)
T cd05599 81 EYLPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTE 158 (364)
T ss_pred CCCCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccc
Confidence 999999999999774 469999999999999999999999999999999999999999999999999987543211100
Q ss_pred CCcchhh-hhc---------cCCCCC-cccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCC
Q 002051 802 LPTTNEK-KRR---------HKGQQN-PVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 870 (975)
Q Consensus 802 ~~~~~~~-~~~---------~~~~~~-~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~P 870 (975)
....... ... ...... ..............+||+.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~P 238 (364)
T cd05599 159 FYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPP 238 (364)
T ss_pred ccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCC
Confidence 0000000 000 000000 00000000012245799999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcC--CCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhccCCCCC
Q 002051 871 FRGKTRQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPEL 947 (975)
Q Consensus 871 f~~~~~~~~~~~i~~~~--~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~~~~~~~ 947 (975)
|.+.+....+..+.... +.+|....+++.+.+||++||. +|.+|++. ..+.++|.||||++++|..+....+|.+
T Consensus 239 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~-~~~~~ll~h~~~~~~~~~~~~~~~~~~~ 315 (364)
T cd05599 239 FCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGN-NGVNEIKSHPFFKGVDWEHIRERPAPII 315 (364)
T ss_pred CCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCC-CCHHHHhcCCCcCCCCHHHHhhcCCCCC
Confidence 99988888877777543 3445555678999999999997 99999963 4599999999999999998766555533
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=351.10 Aligned_cols=253 Identities=34% Similarity=0.561 Sum_probs=202.6
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc---------------------------cccccCCeEEEEEe
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML---------------------------NRNKTKTHVCLITD 722 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~---------------------------~~~~~~~~~~lV~E 722 (975)
.|++.+.||+|+||.||+|.+..+++.||+|.+.+.... ......+++|+|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 378899999999999999999999999999987643211 11125678999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
||++|+|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----- 155 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG----- 155 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC-----
Confidence 999999998887654456899999999999999999999999999999999999999999999999998553210
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 882 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~ 882 (975)
.......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.........
T Consensus 156 -----------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~ 212 (285)
T cd05631 156 -----------------------ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREE 212 (285)
T ss_pred -----------------------CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHH
Confidence 011234689999999999999999999999999999999999999987654322222
Q ss_pred HHh--cCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhccCCCCCCCC
Q 002051 883 ILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAP 950 (975)
Q Consensus 883 i~~--~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~~~~~~~~~p 950 (975)
+.. ..........++..+.+||++||+.||.+||++. ..++++++||||.+++|..+.....+....|
T Consensus 213 ~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~ 283 (285)
T cd05631 213 VDRRVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKRLEANMLEPPFCP 283 (285)
T ss_pred HHHHhhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCHHHHHhCcCCcCCCC
Confidence 221 1111222345788999999999999999999753 2489999999999999999876644333334
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-39 Score=366.93 Aligned_cols=283 Identities=36% Similarity=0.662 Sum_probs=213.2
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV~ 721 (975)
++|.++++||+|+||.||+|.++.+++.||||++.+... .....+..++||||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 479999999999999999999999999999999865321 11222567899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
|||+||+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+.......
T Consensus 81 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 158 (377)
T cd05629 81 EFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSA 158 (377)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 999999999999764 568999999999999999999999999999999999999999999999999996432110000
Q ss_pred -----CCcchhhhh---ccCCCCCc------------ccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHH
Q 002051 802 -----LPTTNEKKR---RHKGQQNP------------VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 861 (975)
Q Consensus 802 -----~~~~~~~~~---~~~~~~~~------------~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il 861 (975)
......... +....... .+...........+||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 238 (377)
T cd05629 159 YYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM 238 (377)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhh
Confidence 000000000 00000000 0000000011235799999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhc--CCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchh
Q 002051 862 YEMLYGYTPFRGKTRQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 939 (975)
Q Consensus 862 ~ell~G~~Pf~~~~~~~~~~~i~~~--~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~ 939 (975)
|+|++|.+||.+.+..+.+..+... .+.+|....++.++.+||.+||. +|.+|++ +..+.+++.||||++++|..+
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~-r~~~~~~l~hp~~~~~~~~~~ 316 (377)
T cd05629 239 FECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLG-RGGAHEIKSHPFFRGVDWDTI 316 (377)
T ss_pred hhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCC-CCCHHHHhcCCCcCCCCHHHH
Confidence 9999999999988887877777653 34555555688999999999998 7887652 112999999999999999998
Q ss_pred hccCCCCCCCCCcccCcc
Q 002051 940 RCMNPPELDAPLFATDTE 957 (975)
Q Consensus 940 ~~~~~~~~~~p~~~~~~~ 957 (975)
+...+|.+ |.+....+
T Consensus 317 ~~~~~~~~--~~~~~~~~ 332 (377)
T cd05629 317 RQIRAPFI--PQLKSITD 332 (377)
T ss_pred ccCCCCcc--cCCCCccc
Confidence 87777755 55444333
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=357.58 Aligned_cols=237 Identities=45% Similarity=0.807 Sum_probs=200.1
Q ss_pred cccccCCceEEEEEEEeCCCeEEEEEEeccchhc---------------------------cccccCCeEEEEEeccCCC
Q 002051 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML---------------------------NRNKTKTHVCLITDYCPGG 727 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~---------------------------~~~~~~~~~~lV~Ey~~gg 727 (975)
+.||+|+||.||+|++..+++.||+|++.+.... .......++||||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999999999999999998754211 1122567899999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchh
Q 002051 728 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 807 (975)
Q Consensus 728 sL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 807 (975)
+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~---------- 148 (328)
T cd05593 81 ELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD---------- 148 (328)
T ss_pred CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc----------
Confidence 999998764 56999999999999999999999999999999999999999999999999998542110
Q ss_pred hhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC
Q 002051 808 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 887 (975)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~~ 887 (975)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+....
T Consensus 149 -----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~ 211 (328)
T cd05593 149 -----------------AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMED 211 (328)
T ss_pred -----------------ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCC
Confidence 011224579999999999999899999999999999999999999999888888777777666
Q ss_pred CCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhcc
Q 002051 888 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCM 942 (975)
Q Consensus 888 ~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~~ 942 (975)
..+|. .++.++.+||++||++||.+|++.. .++.++++||||.+.+|..+...
T Consensus 212 ~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~~ 265 (328)
T cd05593 212 IKFPR--TLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNWQDVYDK 265 (328)
T ss_pred ccCCC--CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhC
Confidence 65554 4788999999999999999998321 13999999999999999876443
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=355.99 Aligned_cols=247 Identities=38% Similarity=0.707 Sum_probs=206.0
Q ss_pred cccccCCceEEEEEEEeCCCeEEEEEEeccchh----------------------------ccccccCCeEEEEEeccCC
Q 002051 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM----------------------------LNRNKTKTHVCLITDYCPG 726 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~----------------------------~~~~~~~~~~~lV~Ey~~g 726 (975)
+.||+|+||.||+|+++.+++.||||++.+... ........++|+|||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 469999999999999999999999999875421 0111256788999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcch
Q 002051 727 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 806 (975)
Q Consensus 727 gsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 806 (975)
++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~--------- 149 (321)
T cd05591 81 GDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN--------- 149 (321)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccC---------
Confidence 9999998764 56899999999999999999999999999999999999999999999999988542210
Q ss_pred hhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 002051 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 886 (975)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~ 886 (975)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 211 (321)
T cd05591 150 ------------------GVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD 211 (321)
T ss_pred ------------------CccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcC
Confidence 01123457999999999999999999999999999999999999999999998888888887
Q ss_pred CCCCCCCCCCcHHHHHHHHHhcccCccccCCChh---hHHHHHcCCCccCCCcchhhccCCCCCCCCCc
Q 002051 887 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE---GANEIKKHPFFKGVNWALVRCMNPPELDAPLF 952 (975)
Q Consensus 887 ~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~---~~~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~ 952 (975)
...+|. .++.++.+||++||+.||++|+++.. .++++++||||..++|..+..........|..
T Consensus 212 ~~~~p~--~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~~~~~~~~~~~~~~~~~ 278 (321)
T cd05591 212 DVLYPV--WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDWVLLEQRKIKPPFKPKI 278 (321)
T ss_pred CCCCCC--CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCCHHHHHhCCCCCCCCCCC
Confidence 765554 46889999999999999999994332 49999999999999999875544333334443
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=362.00 Aligned_cols=280 Identities=40% Similarity=0.706 Sum_probs=218.2
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc---------------------------cccccCCeEEEEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML---------------------------NRNKTKTHVCLIT 721 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~---------------------------~~~~~~~~~~lV~ 721 (975)
++|.+++.||+|+||+||+|++..+++.||||++.+.... ....+..++|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 4799999999999999999999999999999998754211 1122677899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
|||+|++|.+++.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..........
T Consensus 81 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (350)
T cd05573 81 EYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDRE 158 (350)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccc
Confidence 999999999999875 579999999999999999999999999999999999999999999999999987654322000
Q ss_pred CCcchhhhh--ccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 802 LPTTNEKKR--RHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 802 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
......... ......................||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~ 238 (350)
T cd05573 159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQET 238 (350)
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHH
Confidence 000000000 000000000000001123346799999999999999999999999999999999999999999888888
Q ss_pred HHHHHh--cCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhccCCCCCCCCCcccCc
Q 002051 880 FANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDT 956 (975)
Q Consensus 880 ~~~i~~--~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~~ 956 (975)
..++.. ....+|....+++.+.+||.+||. ||.+|++. ++++++||||++++|.......+|.+ |.+++..
T Consensus 239 ~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s---~~~ll~hp~~~~~~~~~~~~~~~~~~--~~~~~~~ 311 (350)
T cd05573 239 YNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGS---FEEIKSHPFFKGIDWENLRETKPPFV--PELSSPL 311 (350)
T ss_pred HHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCC---HHHHhcCCCcCCCCHHHHhhCCCCcC--CCCCCch
Confidence 888877 555666666679999999999997 99999984 89999999999999998876555544 5544433
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=343.13 Aligned_cols=249 Identities=26% Similarity=0.378 Sum_probs=211.2
Q ss_pred ccccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc-------------------------cccccCCe
Q 002051 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-------------------------NRNKTKTH 716 (975)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~-------------------------~~~~~~~~ 716 (975)
..+.++.+.|++..+||.|..++||+|+...++..||||++..+... ..+..+..
T Consensus 19 ~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~ 98 (516)
T KOG0582|consen 19 KEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSE 98 (516)
T ss_pred ccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecce
Confidence 34567788999999999999999999999999999999998765421 12225778
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
+|+||.||.+|++.++++......++|..+..|++++++||.|||.+|.||||||+.||||+.+|.|||+|||.+..+..
T Consensus 99 LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 99 LWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFD 178 (516)
T ss_pred eEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecc
Confidence 99999999999999999987667799999999999999999999999999999999999999999999999999865442
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC--CCCCChhHHHHHHHHHHHHHhCCCCCCCC
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGK 874 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~~~k~DIWSLG~il~ell~G~~Pf~~~ 874 (975)
.... .... .++++||+.|||||++.. .+|+.|+||||||++..||.+|..||...
T Consensus 179 ~G~R----------------------~~~r-f~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~ 235 (516)
T KOG0582|consen 179 SGDR----------------------QVTR-FNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKY 235 (516)
T ss_pred cCce----------------------eeEe-eccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccC
Confidence 2100 0011 167899999999999643 57999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCCCCCC--------CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcc
Q 002051 875 TRQKTFANILHKDLKFPSS--------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 937 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~~p~~--------~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~ 937 (975)
.+.+++..-+++..+.+.. ...+..++.++..||++||.+||| ++++|+|+||+...-.
T Consensus 236 pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRpt----AskLlkh~FFk~~k~~ 302 (516)
T KOG0582|consen 236 PPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPT----ASKLLKHAFFKKAKSK 302 (516)
T ss_pred ChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCC----HHHHhccHHHhhccch
Confidence 9999888888876653332 235667999999999999999999 9999999999976544
|
|
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=363.16 Aligned_cols=242 Identities=37% Similarity=0.649 Sum_probs=205.5
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHV 717 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~ 717 (975)
.+..++|++++.||+|+||.||+|+++.+++.||+|++.+... .....+..++
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~ 118 (370)
T cd05596 39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYL 118 (370)
T ss_pred CCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 4567799999999999999999999999999999999865321 1112266789
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|+|||||+||+|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 119 ~lv~Ey~~gg~L~~~l~~---~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 119 YMVMEYMPGGDLVNLMSN---YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCC
Confidence 999999999999999875 35899999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC----CCCChhHHHHHHHHHHHHHhCCCCCCC
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA----GHTSAVDWWALGILLYEMLYGYTPFRG 873 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~----~~~~k~DIWSLG~il~ell~G~~Pf~~ 873 (975)
. .......+||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+
T Consensus 196 ~--------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~ 249 (370)
T cd05596 196 G--------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 249 (370)
T ss_pred C--------------------------cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCC
Confidence 0 0112345799999999998754 378899999999999999999999999
Q ss_pred CCHHHHHHHHHhcC--CCCCCCCCCcHHHHHHHHHhcccCccc--cCCChhhHHHHHcCCCccCCCcchh
Q 002051 874 KTRQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKS--RLGSHEGANEIKKHPFFKGVNWALV 939 (975)
Q Consensus 874 ~~~~~~~~~i~~~~--~~~p~~~~~s~~~~~li~~~L~~dP~~--R~t~~~~~~elL~Hp~f~~~~~~~~ 939 (975)
.+....+.++.... +.+|....+|.++++||++||+.+|.+ |+| +++++.||||++.+|...
T Consensus 250 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s----~~ell~h~~~~~~~~~~~ 315 (370)
T cd05596 250 DSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNG----VDEIKSHPFFKNDQWTFD 315 (370)
T ss_pred CCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCC----HHHHhcCcccCCCChhhH
Confidence 88888888887643 456665678999999999999999988 999 999999999999998754
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-40 Score=353.81 Aligned_cols=274 Identities=38% Similarity=0.628 Sum_probs=239.2
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhcc---------------------------ccccCCeE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN---------------------------RNKTKTHV 717 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~---------------------------~~~~~~~~ 717 (975)
.+...+++++..||-|+||.|-+++.......+|+|+++|..+.+ -+.+..++
T Consensus 416 ~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyv 495 (732)
T KOG0614|consen 416 QVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYV 495 (732)
T ss_pred ccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhh
Confidence 456778999999999999999999987776679999998864322 22378899
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|++||-|-||.|+..|..+ +.|.+..++.++..+++|++|||++|||+|||||+|+|++.+|.+||.|||+|+.+...
T Consensus 496 YmLmEaClGGElWTiLrdR--g~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 496 YMLMEACLGGELWTILRDR--GSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG 573 (732)
T ss_pred hhhHHhhcCchhhhhhhhc--CCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence 9999999999999999875 67999999999999999999999999999999999999999999999999999876522
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
....++||||.|.|||+++...++.++|.||||+++|||++|.+||.+.++.
T Consensus 574 ----------------------------~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm 625 (732)
T KOG0614|consen 574 ----------------------------RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM 625 (732)
T ss_pred ----------------------------CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH
Confidence 3456899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhccCCCCCCCCCcccCc
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDT 956 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~~ 956 (975)
..+..|+++--.+..+..++..+.+||+++...+|.+|+... ..+.+|.+|.||.++||..++...-|....|.+.+++
T Consensus 626 ktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~~L~pPi~~~va~pt 705 (732)
T KOG0614|consen 626 KTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSRTLPPPIIPSVANPT 705 (732)
T ss_pred HHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhccCCCCccccCCCcc
Confidence 999999987544444456788999999999999999999853 5799999999999999998877666666779999998
Q ss_pred ccccccCCcchh
Q 002051 957 EKEYKVVDPGMQ 968 (975)
Q Consensus 957 ~~~~~~~~~~~~ 968 (975)
+..|...-+..+
T Consensus 706 D~s~Fd~~p~dn 717 (732)
T KOG0614|consen 706 DVSNFDNFPPDN 717 (732)
T ss_pred cchhccCCCccc
Confidence 888776655443
|
|
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-38 Score=353.82 Aligned_cols=239 Identities=41% Similarity=0.767 Sum_probs=204.2
Q ss_pred cccccccccCCceEEEEEEEeCCCeEEEEEEeccchh------------------------------ccccccCCeEEEE
Q 002051 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM------------------------------LNRNKTKTHVCLI 720 (975)
Q Consensus 671 y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~------------------------------~~~~~~~~~~~lV 720 (975)
|++++.||+|+||.||+|.+..+++.||||++++... ........++|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 7889999999999999999999999999999875321 0111256789999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 800 (975)
||||+|++|..++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~--- 154 (324)
T cd05589 81 MEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF--- 154 (324)
T ss_pred EcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC---
Confidence 999999999988864 46999999999999999999999999999999999999999999999999988542110
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~ 880 (975)
.......+|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+
T Consensus 155 ------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~ 210 (324)
T cd05589 155 ------------------------GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVF 210 (324)
T ss_pred ------------------------CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 01123467999999999999999999999999999999999999999999888888
Q ss_pred HHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChh-hHHHHHcCCCccCCCcchhhc
Q 002051 881 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVRC 941 (975)
Q Consensus 881 ~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~-~~~elL~Hp~f~~~~~~~~~~ 941 (975)
..+......+|. .++..+.+||.+||+.||.+||++.+ ++.++++||||++++|.....
T Consensus 211 ~~i~~~~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~~~~~~ 270 (324)
T cd05589 211 DSIVNDEVRYPR--FLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINWDDLLA 270 (324)
T ss_pred HHHHhCCCCCCC--CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCCHHHHHh
Confidence 888877665554 46889999999999999999996443 499999999999999987643
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-38 Score=352.83 Aligned_cols=242 Identities=36% Similarity=0.693 Sum_probs=207.0
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc----------------------------cccccCCeEEEEE
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML----------------------------NRNKTKTHVCLIT 721 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~----------------------------~~~~~~~~~~lV~ 721 (975)
+|.+.+.||+|+||+||+|.++.+|+.||||++.+.... ........+|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 478899999999999999999999999999998753211 1112566789999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
|||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~---- 154 (323)
T cd05615 81 EYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD---- 154 (323)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCC----
Confidence 999999999999764 56999999999999999999999999999999999999999999999999998542210
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~ 881 (975)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+.
T Consensus 155 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~ 211 (323)
T cd05615 155 -----------------------GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQ 211 (323)
T ss_pred -----------------------CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011234579999999999999999999999999999999999999999998888888
Q ss_pred HHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhcc
Q 002051 882 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCM 942 (975)
Q Consensus 882 ~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~~ 942 (975)
.+......+|. .++..+.+|+.+||+++|.+|++.. +..+++++||||..++|..+...
T Consensus 212 ~i~~~~~~~p~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~~~~~~~ 271 (323)
T cd05615 212 SIMEHNVSYPK--SLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDWDKLENR 271 (323)
T ss_pred HHHhCCCCCCc--cCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCHHHHhcC
Confidence 88887766554 4688999999999999999999853 34789999999999999877554
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-38 Score=351.91 Aligned_cols=233 Identities=37% Similarity=0.756 Sum_probs=197.3
Q ss_pred cccccCCceEEEEEEEeCCCeEEEEEEeccchh----------------------------ccccccCCeEEEEEeccCC
Q 002051 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM----------------------------LNRNKTKTHVCLITDYCPG 726 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~----------------------------~~~~~~~~~~~lV~Ey~~g 726 (975)
+.||+|+||.||+|.+..+++.||||++++... .....+..++|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 469999999999999999999999999876421 0111256788999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcch
Q 002051 727 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 806 (975)
Q Consensus 727 gsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 806 (975)
|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~--------- 149 (316)
T cd05619 81 GDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG--------- 149 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCC---------
Confidence 9999999764 56899999999999999999999999999999999999999999999999998542110
Q ss_pred hhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 002051 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 886 (975)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~ 886 (975)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~ 211 (316)
T cd05619 150 ------------------DAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD 211 (316)
T ss_pred ------------------CCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence 01123457899999999999999999999999999999999999999998887777777665
Q ss_pred CCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHH-HHHcCCCccCCCcchhhcc
Q 002051 887 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN-EIKKHPFFKGVNWALVRCM 942 (975)
Q Consensus 887 ~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~-elL~Hp~f~~~~~~~~~~~ 942 (975)
...+|. .++..+.+||.+||+.||.+||+ +. +++.||||+.++|..+...
T Consensus 212 ~~~~~~--~~~~~~~~li~~~l~~~P~~R~~----~~~~l~~h~~~~~~~~~~~~~~ 262 (316)
T cd05619 212 NPCYPR--WLTREAKDILVKLFVREPERRLG----VKGDIRQHPFFREIDWSALEER 262 (316)
T ss_pred CCCCCc--cCCHHHHHHHHHHhccCHhhcCC----ChHHHHcCcccCCCCHHHHHhC
Confidence 544443 47889999999999999999999 64 8999999999999877543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-38 Score=361.66 Aligned_cols=265 Identities=34% Similarity=0.559 Sum_probs=203.1
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc---------------------------cccccCCeEEEEEe
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML---------------------------NRNKTKTHVCLITD 722 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~---------------------------~~~~~~~~~~lV~E 722 (975)
.|++++.||+|+||+||+|+++.+++.||||++.+..+. ....+..++|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 689999999999999999999999999999998654211 11225778999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..+........
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~ 159 (381)
T cd05626 82 YIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKY 159 (381)
T ss_pred cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccc
Confidence 99999999999764 5689999999999999999999999999999999999999999999999999865422111000
Q ss_pred Ccchhhhhcc--------------------CCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHH
Q 002051 803 PTTNEKKRRH--------------------KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 862 (975)
Q Consensus 803 ~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ 862 (975)
.......... ...................+||+.|+|||++.+..++.++|||||||++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~ 239 (381)
T cd05626 160 YQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILF 239 (381)
T ss_pred ccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHH
Confidence 0000000000 00000000000011123568999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHh--cCCCCCCCCCCcHHHHHHHHHhccc--CccccCCChhhHHHHHcCCCccCCCcch
Q 002051 863 EMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHR--DPKSRLGSHEGANEIKKHPFFKGVNWAL 938 (975)
Q Consensus 863 ell~G~~Pf~~~~~~~~~~~i~~--~~~~~p~~~~~s~~~~~li~~~L~~--dP~~R~t~~~~~~elL~Hp~f~~~~~~~ 938 (975)
+|++|..||...+.......+.. ....+|....+++++++||.+||.. +|..|++ +.+++.||||++++|..
T Consensus 240 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~----~~~~l~hp~f~~~~~~~ 315 (381)
T cd05626 240 EMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNG----ADDIKAHPFFSEVDFSS 315 (381)
T ss_pred HHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCC----HHHHhcCcccCCCChhH
Confidence 99999999998887776666664 3345565566899999999996654 4555999 99999999999999976
Q ss_pred hh
Q 002051 939 VR 940 (975)
Q Consensus 939 ~~ 940 (975)
..
T Consensus 316 ~~ 317 (381)
T cd05626 316 DI 317 (381)
T ss_pred Hh
Confidence 53
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-38 Score=351.96 Aligned_cols=236 Identities=41% Similarity=0.793 Sum_probs=199.2
Q ss_pred cccccCCceEEEEEEEeCCCeEEEEEEeccchhc----------------------------cccccCCeEEEEEeccCC
Q 002051 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML----------------------------NRNKTKTHVCLITDYCPG 726 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~----------------------------~~~~~~~~~~lV~Ey~~g 726 (975)
+.||+|+||.||+|.+..+++.||||++++.... .......++|+|||||+|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999999999999999998754210 111256789999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcch
Q 002051 727 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 806 (975)
Q Consensus 727 gsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 806 (975)
|+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~--------- 149 (316)
T cd05592 81 GDLMFHIQSS--GRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNG--------- 149 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCC---------
Confidence 9999999764 56999999999999999999999999999999999999999999999999998543211
Q ss_pred hhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 002051 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 886 (975)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~ 886 (975)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~ 211 (316)
T cd05592 150 ------------------EGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND 211 (316)
T ss_pred ------------------CCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence 01223457999999999999999999999999999999999999999998888888777665
Q ss_pred CCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhccCC
Q 002051 887 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNP 944 (975)
Q Consensus 887 ~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~~~~ 944 (975)
...+| ..++.++.+||.+||+.||.+||++ ..+++.||||..++|..+.....
T Consensus 212 ~~~~~--~~~~~~~~~ll~~~l~~~P~~R~~~---~~~l~~h~~~~~~~~~~~~~~~~ 264 (316)
T cd05592 212 RPHFP--RWISKEAKDCLSKLFERDPTKRLGV---DGDIRQHPFFRGIDWERLEKREI 264 (316)
T ss_pred CCCCC--CCCCHHHHHHHHHHccCCHHHcCCC---hHHHHcCcccCCCCHHHHHhCCC
Confidence 54444 3478899999999999999999982 45899999999999987754433
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-38 Score=354.24 Aligned_cols=236 Identities=41% Similarity=0.744 Sum_probs=202.0
Q ss_pred cccccCCceEEEEEEEeCCCeEEEEEEeccchh----------------------------ccccccCCeEEEEEeccCC
Q 002051 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM----------------------------LNRNKTKTHVCLITDYCPG 726 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~----------------------------~~~~~~~~~~~lV~Ey~~g 726 (975)
+.||+|+||+||+|+++.+|+.||||++.+... .........+|+|||||+|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 469999999999999999999999999865321 0111256788999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcch
Q 002051 727 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 806 (975)
Q Consensus 727 gsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 806 (975)
|+|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~--------- 149 (323)
T cd05575 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH--------- 149 (323)
T ss_pred CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccC---------
Confidence 9999999764 56999999999999999999999999999999999999999999999999998542100
Q ss_pred hhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 002051 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 886 (975)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~ 886 (975)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~ 211 (323)
T cd05575 150 ------------------SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNK 211 (323)
T ss_pred ------------------CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcC
Confidence 11223457999999999999999999999999999999999999999998888888888876
Q ss_pred CCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhc
Q 002051 887 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRC 941 (975)
Q Consensus 887 ~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~ 941 (975)
...++. .++..+.+||++||+.||.+||+..+.+.+++.||||.+++|..+..
T Consensus 212 ~~~~~~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~~~~~~ 264 (323)
T cd05575 212 PLRLKP--NISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINWDDLVN 264 (323)
T ss_pred CCCCCC--CCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCHHHHhh
Confidence 655443 46889999999999999999999777789999999999999987643
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=360.42 Aligned_cols=271 Identities=37% Similarity=0.679 Sum_probs=209.3
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV~ 721 (975)
++|++++.||+|+||.||+|.++.+++.||||++.+... .....+..++||||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 479999999999999999999999999999999865321 11122677899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
|||+||+|.+++.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++..........
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~ 158 (360)
T cd05627 81 EFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTE 158 (360)
T ss_pred eCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccc
Confidence 999999999999764 569999999999999999999999999999999999999999999999999987543211100
Q ss_pred CCcchhhhh-ccCCC------CCc-ccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCC
Q 002051 802 LPTTNEKKR-RHKGQ------QNP-VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 873 (975)
Q Consensus 802 ~~~~~~~~~-~~~~~------~~~-~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~ 873 (975)
......... ..... ... .............+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~ 238 (360)
T cd05627 159 FYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (360)
T ss_pred cccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence 000000000 00000 000 0000001112346899999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhc--CCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhccC
Q 002051 874 KTRQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMN 943 (975)
Q Consensus 874 ~~~~~~~~~i~~~--~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~~~ 943 (975)
.+....+..+... .+.+|....++..+++||.+|+. ||.+|++. ..+.++++||||++++|..+....
T Consensus 239 ~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~-~~~~ei~~hp~f~~~~~~~~~~~~ 308 (360)
T cd05627 239 ETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGS-NGVEEIKSHPFFEGVDWGHIRERP 308 (360)
T ss_pred CCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCC-CCHHHHhcCCCCCCCCHHHHhcCC
Confidence 8888888887753 34455555688999999999874 99999962 248999999999999999886553
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-38 Score=353.23 Aligned_cols=236 Identities=42% Similarity=0.778 Sum_probs=200.0
Q ss_pred cccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEEEeccCCC
Q 002051 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLITDYCPGG 727 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV~Ey~~gg 727 (975)
+.||+|+||.||+|++..+|+.||+|++.+... ........++|||||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 469999999999999999999999999875421 11123567899999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchh
Q 002051 728 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 807 (975)
Q Consensus 728 sL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 807 (975)
+|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~---------- 148 (323)
T cd05595 81 ELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---------- 148 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCC----------
Confidence 999998764 56899999999999999999999999999999999999999999999999988542110
Q ss_pred hhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC
Q 002051 808 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 887 (975)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~~ 887 (975)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+....
T Consensus 149 -----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 211 (323)
T cd05595 149 -----------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 211 (323)
T ss_pred -----------------CCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC
Confidence 011124579999999999999999999999999999999999999999888888888887776
Q ss_pred CCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhc
Q 002051 888 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC 941 (975)
Q Consensus 888 ~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~ 941 (975)
..+|. .+++.+.+||.+||++||.+|++.. ..+.++++||||.+++|.....
T Consensus 212 ~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~ 264 (323)
T cd05595 212 IRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQ 264 (323)
T ss_pred CCCCC--CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCHHHHHh
Confidence 66654 4789999999999999999998321 1399999999999999987644
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=357.99 Aligned_cols=247 Identities=37% Similarity=0.672 Sum_probs=208.4
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV~ 721 (975)
++|.+.+.||+|+||+||+|.++.+|+.||+|++++... .....+..++||||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 479999999999999999999999999999999876422 01112567899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
|||+||+|.+++.+. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 81 e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~-- 157 (330)
T cd05601 81 EYQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM-- 157 (330)
T ss_pred CCCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCc--
Confidence 999999999999764 24699999999999999999999999999999999999999999999999999865431110
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhc------CCCCCChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA------GAGHTSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~------~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
.......||+.|+|||++. +..++.++|||||||++|+|++|..||...+
T Consensus 158 ------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~ 213 (330)
T cd05601 158 ------------------------VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT 213 (330)
T ss_pred ------------------------eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCC
Confidence 0112347899999999987 4567789999999999999999999999888
Q ss_pred HHHHHHHHHhcC--CCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhccCCCCC
Q 002051 876 RQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPEL 947 (975)
Q Consensus 876 ~~~~~~~i~~~~--~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~~~~~~~ 947 (975)
....+.++.... ..+|....++..+.+||.+||. +|.+||| +++++.||||..++|..+....++..
T Consensus 214 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t----~~~l~~h~~~~~~~~~~~~~~~~~~~ 282 (330)
T cd05601 214 SAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLG----YEGLCCHPFFSKIDWNNIRNSLPPFV 282 (330)
T ss_pred HHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCC----HHHHhCCCCcCCCCHHHHhhCCCCcc
Confidence 888887776543 4455556689999999999998 9999999 99999999999999998877655543
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=329.08 Aligned_cols=240 Identities=32% Similarity=0.533 Sum_probs=207.9
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch---------------------------------hccccccC
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV---------------------------------MLNRNKTK 714 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~---------------------------------~~~~~~~~ 714 (975)
...|..-+.||.|..++|-.|.++.+|+.+|+|++.... +.+.++.+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 346888889999999999999999999999999986431 12333467
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCcc
Q 002051 715 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 794 (975)
Q Consensus 715 ~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~ 794 (975)
..+++|+|.|+.|.|+|++... -.+++...+.|++|+++|+.|||.++||||||||+|||++++.++||+|||+|+.+
T Consensus 96 sF~FlVFdl~prGELFDyLts~--VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l 173 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSK--VTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQL 173 (411)
T ss_pred chhhhhhhhcccchHHHHhhhh--eeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeecc
Confidence 7788999999999999999874 57999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC------CCCCChhHHHHHHHHHHHHHhCC
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG------AGHTSAVDWWALGILLYEMLYGY 868 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~------~~~~~k~DIWSLG~il~ell~G~ 868 (975)
... ......||||.|+|||.+.. .+|+..+|+||+|++||-|+.|.
T Consensus 174 ~~G----------------------------ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGc 225 (411)
T KOG0599|consen 174 EPG----------------------------EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGC 225 (411)
T ss_pred CCc----------------------------hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCC
Confidence 522 22335799999999998853 45788999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHhcCCCCCC--CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhc
Q 002051 869 TPFRGKTRQKTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRC 941 (975)
Q Consensus 869 ~Pf~~~~~~~~~~~i~~~~~~~p~--~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~ 941 (975)
+||......-++..|+.+.+.|.. +.++|...+|||.+||+.||.+|+| ++|+|.||||..+-....+.
T Consensus 226 pPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Rit----ake~LaHpff~q~~~~~~r~ 296 (411)
T KOG0599|consen 226 PPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRIT----AKEALAHPFFIQIAQQQARQ 296 (411)
T ss_pred CchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhccc----HHHHhcChHHHHHHHhcccc
Confidence 999998888899999999887754 4678899999999999999999999 99999999997664444443
|
|
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-38 Score=361.86 Aligned_cols=270 Identities=36% Similarity=0.613 Sum_probs=206.6
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV~ 721 (975)
++|++++.||+|+||.||+|++..+++.||||++.+... .....+.+++||||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 479999999999999999999999999999999865321 11122577899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
|||+||+|.+++.+. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|..+.......
T Consensus 81 E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~ 158 (376)
T cd05598 81 DYIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (376)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccc
Confidence 999999999999774 568999999999999999999999999999999999999999999999999986432111000
Q ss_pred -CCcchhhhhc--c-------------CCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHH
Q 002051 802 -LPTTNEKKRR--H-------------KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 865 (975)
Q Consensus 802 -~~~~~~~~~~--~-------------~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell 865 (975)
.......... . ...................+||+.|+|||++.+..++.++|||||||++|+|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell 238 (376)
T cd05598 159 YYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 238 (376)
T ss_pred ccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehh
Confidence 0000000000 0 00000000000011223568999999999999999999999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhc--CCCCCCCCCCcHHHHHHHHHhcccCccccC---CChhhHHHHHcCCCccCCCcchhh
Q 002051 866 YGYTPFRGKTRQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRL---GSHEGANEIKKHPFFKGVNWALVR 940 (975)
Q Consensus 866 ~G~~Pf~~~~~~~~~~~i~~~--~~~~p~~~~~s~~~~~li~~~L~~dP~~R~---t~~~~~~elL~Hp~f~~~~~~~~~ 940 (975)
+|+.||.+.+..+....+... ...++....++..+.+||.+|+ .+|.+|+ + +.++++||||++++|....
T Consensus 239 ~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t----~~ell~h~~~~~~~~~~~~ 313 (376)
T cd05598 239 VGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNG----ADEIKAHPFFKGIDFASLI 313 (376)
T ss_pred hCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCC----HHHHhCCCCcCCCCHHHHh
Confidence 999999998887777666653 3344444568899999999987 5999999 6 9999999999999998773
Q ss_pred -ccCCC
Q 002051 941 -CMNPP 945 (975)
Q Consensus 941 -~~~~~ 945 (975)
...+|
T Consensus 314 ~~~~~~ 319 (376)
T cd05598 314 RRQKAP 319 (376)
T ss_pred hcCCCC
Confidence 44444
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-38 Score=350.28 Aligned_cols=232 Identities=42% Similarity=0.746 Sum_probs=198.7
Q ss_pred cccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEEEeccCCCCH
Q 002051 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLITDYCPGGEL 729 (975)
Q Consensus 677 LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV~Ey~~ggsL 729 (975)
||+|+||.||+|++..+++.||+|++.+... ........++|+|||||+||+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 7999999999999999999999999865321 1112256789999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhh
Q 002051 730 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 809 (975)
Q Consensus 730 ~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 809 (975)
.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~------------ 146 (312)
T cd05585 81 FHHLQRE--GRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD------------ 146 (312)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccC------------
Confidence 9999764 56999999999999999999999999999999999999999999999999998542110
Q ss_pred hccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC
Q 002051 810 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 889 (975)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~ 889 (975)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+......
T Consensus 147 ---------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~ 211 (312)
T cd05585 147 ---------------DDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLR 211 (312)
T ss_pred ---------------CCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCC
Confidence 01123457999999999999999999999999999999999999999998888888888877666
Q ss_pred CCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhh
Q 002051 890 FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 940 (975)
Q Consensus 890 ~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~ 940 (975)
+|. .++..+.+||.+||.+||.+||+. ..+.++|.||||+..+|..+.
T Consensus 212 ~~~--~~~~~~~~li~~~L~~dp~~R~~~-~~~~e~l~hp~~~~~~~~~~~ 259 (312)
T cd05585 212 FPD--GFDRDAKDLLIGLLSRDPTRRLGY-NGAQEIKNHPFFSQLSWKKLL 259 (312)
T ss_pred CCC--cCCHHHHHHHHHHcCCCHHHcCCC-CCHHHHHcCCCcCCCCHHHHH
Confidence 554 478899999999999999999863 238999999999999997664
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-38 Score=350.68 Aligned_cols=233 Identities=40% Similarity=0.766 Sum_probs=197.3
Q ss_pred cccccCCceEEEEEEEeCCCeEEEEEEeccchh----------------------------ccccccCCeEEEEEeccCC
Q 002051 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM----------------------------LNRNKTKTHVCLITDYCPG 726 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~----------------------------~~~~~~~~~~~lV~Ey~~g 726 (975)
+.||+|+||.||+|.++.+|+.||+|++++... .......+++|+|||||.|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 469999999999999999999999999875421 0111256789999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcch
Q 002051 727 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 806 (975)
Q Consensus 727 gsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 806 (975)
|+|..++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--------- 149 (316)
T cd05620 81 GDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG--------- 149 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccC---------
Confidence 9999998764 56899999999999999999999999999999999999999999999999988532100
Q ss_pred hhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 002051 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 886 (975)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~ 886 (975)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~ 211 (316)
T cd05620 150 ------------------DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD 211 (316)
T ss_pred ------------------CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence 01123467999999999999999999999999999999999999999988888777777665
Q ss_pred CCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhc
Q 002051 887 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRC 941 (975)
Q Consensus 887 ~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~ 941 (975)
...+|. .++.++++||++||+.||.+|++. .+++++||||+.++|..+..
T Consensus 212 ~~~~~~--~~~~~~~~li~~~l~~dP~~R~~~---~~~~~~h~~f~~~~~~~~~~ 261 (316)
T cd05620 212 TPHYPR--WITKESKDILEKLFERDPTRRLGV---VGNIRGHPFFKTINWTALEK 261 (316)
T ss_pred CCCCCC--CCCHHHHHHHHHHccCCHHHcCCC---hHHHHcCCCcCCCCHHHHHh
Confidence 544443 478899999999999999999992 36899999999999986643
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-40 Score=351.80 Aligned_cols=233 Identities=27% Similarity=0.418 Sum_probs=198.7
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhcc-------------------------ccccCCeEEEEEec
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-------------------------RNKTKTHVCLITDY 723 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~-------------------------~~~~~~~~~lV~Ey 723 (975)
..|+.+..||+|+||.||+|.+..+++.||||++....... .+.....++|+|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 46888899999999999999999999999999997653211 11145566799999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
|.||++.++++.. ..+.+..+..++++++.||.|||.++.+|||||+.|||+..+|.+||+|||++..+...
T Consensus 93 ~~gGsv~~lL~~~--~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~------ 164 (467)
T KOG0201|consen 93 CGGGSVLDLLKSG--NILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNT------ 164 (467)
T ss_pred hcCcchhhhhccC--CCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeech------
Confidence 9999999999763 55699999999999999999999999999999999999999999999999998654311
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i 883 (975)
.....+++|||.|||||++.+..|+.++||||||++.|||.+|.+||...++...+..|
T Consensus 165 ---------------------~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflI 223 (467)
T KOG0201|consen 165 ---------------------VKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLI 223 (467)
T ss_pred ---------------------hhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEec
Confidence 12236789999999999999989999999999999999999999999998886655555
Q ss_pred HhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCC
Q 002051 884 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935 (975)
Q Consensus 884 ~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~ 935 (975)
-+...+... ..+|+.+++|+..||++||+.||+ |.+||+|+|++.-.
T Consensus 224 pk~~PP~L~-~~~S~~~kEFV~~CL~k~P~~Rps----A~~LLKh~FIk~a~ 270 (467)
T KOG0201|consen 224 PKSAPPRLD-GDFSPPFKEFVEACLDKNPEFRPS----AKELLKHKFIKRAK 270 (467)
T ss_pred cCCCCCccc-cccCHHHHHHHHHHhhcCcccCcC----HHHHhhhHHHHhcC
Confidence 444433333 378999999999999999999999 99999999998744
|
|
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-38 Score=354.14 Aligned_cols=236 Identities=43% Similarity=0.790 Sum_probs=198.9
Q ss_pred cccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEEEeccCCC
Q 002051 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLITDYCPGG 727 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV~Ey~~gg 727 (975)
+.||+|+||.||+|.+..+|+.||+|++.+... ........++|||||||+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 469999999999999999999999999875421 11112567899999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcch
Q 002051 728 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 806 (975)
Q Consensus 728 sL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~-~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 806 (975)
+|..++... ..+++..++.++.||+.||.|||+ +||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~--------- 149 (325)
T cd05594 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--------- 149 (325)
T ss_pred cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC---------
Confidence 999998764 569999999999999999999997 79999999999999999999999999998542110
Q ss_pred hhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 002051 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 886 (975)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~ 886 (975)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~ 211 (325)
T cd05594 150 ------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME 211 (325)
T ss_pred ------------------CcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcC
Confidence 01122457999999999999999999999999999999999999999998888888777776
Q ss_pred CCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhc
Q 002051 887 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC 941 (975)
Q Consensus 887 ~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~ 941 (975)
...+|. .+++++.+||++||++||++|++.. .++.++++||||.++.|.....
T Consensus 212 ~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~ 265 (325)
T cd05594 212 EIRFPR--TLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQDVYE 265 (325)
T ss_pred CCCCCC--CCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCHHHHHh
Confidence 666554 4788999999999999999998211 1299999999999999986644
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-38 Score=356.25 Aligned_cols=236 Identities=41% Similarity=0.752 Sum_probs=200.6
Q ss_pred cccCCceEEEEEEEeCCCeEEEEEEeccchhc------------------------------cccccCCeEEEEEeccCC
Q 002051 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVML------------------------------NRNKTKTHVCLITDYCPG 726 (975)
Q Consensus 677 LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~------------------------------~~~~~~~~~~lV~Ey~~g 726 (975)
||+|+||+||+|+++.+++.||||++.+.... .......++|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 79999999999999999999999998653210 011246778999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcch
Q 002051 727 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 806 (975)
Q Consensus 727 gsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 806 (975)
|+|..++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~--------- 149 (330)
T cd05586 81 GELFWHLQKE--GRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTD--------- 149 (330)
T ss_pred ChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCC---------
Confidence 9999998764 56999999999999999999999999999999999999999999999999998542210
Q ss_pred hhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q 002051 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH 885 (975)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~ 885 (975)
.......+||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+....+..+..
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~ 211 (330)
T cd05586 150 ------------------NKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAF 211 (330)
T ss_pred ------------------CCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHc
Confidence 0112346799999999999764 478999999999999999999999999888888888877
Q ss_pred cCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhcc
Q 002051 886 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCM 942 (975)
Q Consensus 886 ~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~~ 942 (975)
+...++.. .++..+.+||++||++||.+||++..++.+++.||||...+|..+...
T Consensus 212 ~~~~~~~~-~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~~~~~~~~ 267 (330)
T cd05586 212 GKVRFPKN-VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADIDWDLLSKK 267 (330)
T ss_pred CCCCCCCc-cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCCHHHHHhC
Confidence 76666543 468899999999999999999987777999999999999999877543
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-38 Score=359.97 Aligned_cols=266 Identities=35% Similarity=0.611 Sum_probs=205.3
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEEEe
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLITD 722 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV~E 722 (975)
+|+++++||+|+||+||+|+++.+++.||+|++.+... .....+..++|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 69999999999999999999999999999999875321 112226778999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
||+||+|.+++.+. +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++..+........
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~ 159 (382)
T cd05625 82 YIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159 (382)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccc
Confidence 99999999999764 5689999999999999999999999999999999999999999999999999864321110000
Q ss_pred Ccch-hhhhccCC--------------C-----CCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHH
Q 002051 803 PTTN-EKKRRHKG--------------Q-----QNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 862 (975)
Q Consensus 803 ~~~~-~~~~~~~~--------------~-----~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ 862 (975)
.... ........ . ................+||+.|+|||++.+..++.++|||||||++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~ 239 (382)
T cd05625 160 YQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 239 (382)
T ss_pred cccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHH
Confidence 0000 00000000 0 00000000011223568999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhc--CCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchh
Q 002051 863 EMLYGYTPFRGKTRQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 939 (975)
Q Consensus 863 ell~G~~Pf~~~~~~~~~~~i~~~--~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~ 939 (975)
+|++|++||.+.+..+....+... ...+|....+++++.++|.+|+ .+|.+|++ ...+.+++.||||+.++|...
T Consensus 240 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~-~~~~~ei~~hp~f~~~~~~~~ 316 (382)
T cd05625 240 EMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLG-KNGADEIKAHPFFKTIDFSSD 316 (382)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCC-CCCHHHHhcCCCcCCcChHHH
Confidence 999999999998887777777653 3445555668999999999986 59999997 345899999999999999764
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-38 Score=358.66 Aligned_cols=256 Identities=36% Similarity=0.653 Sum_probs=207.0
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHV 717 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~ 717 (975)
.+..++|++++.||+|+||.||+|+++.+++.||+|++.+... .....+..++
T Consensus 39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (370)
T cd05621 39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL 118 (370)
T ss_pred CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence 3456789999999999999999999999999999999865321 1122367789
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|+|||||+||+|.+++.. ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 119 ~lv~Ey~~gg~L~~~l~~---~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~ 195 (370)
T cd05621 119 YMVMEYMPGGDLVNLMSN---YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET 195 (370)
T ss_pred EEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccC
Confidence 999999999999999975 35899999999999999999999999999999999999999999999999998654311
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC----CCChhHHHHHHHHHHHHHhCCCCCCC
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGILLYEMLYGYTPFRG 873 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~----~~~k~DIWSLG~il~ell~G~~Pf~~ 873 (975)
. .......+||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+
T Consensus 196 ~--------------------------~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~ 249 (370)
T cd05621 196 G--------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYA 249 (370)
T ss_pred C--------------------------ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCC
Confidence 0 01123567999999999997643 77899999999999999999999999
Q ss_pred CCHHHHHHHHHhcC--CCCCCCCCCcHHHHHHHHHhcccCccc--cCCChhhHHHHHcCCCccCCCcc--hhhccCCCCC
Q 002051 874 KTRQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKS--RLGSHEGANEIKKHPFFKGVNWA--LVRCMNPPEL 947 (975)
Q Consensus 874 ~~~~~~~~~i~~~~--~~~p~~~~~s~~~~~li~~~L~~dP~~--R~t~~~~~~elL~Hp~f~~~~~~--~~~~~~~~~~ 947 (975)
.+....+..+.... +.+|....++..++++|.+||..++.+ |+| +.++++||||++.+|. ..+...+|.
T Consensus 250 ~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~----~~e~l~hp~~~~~~~~~~~~~~~~~~~- 324 (370)
T cd05621 250 DSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNG----VEEIKQHPFFKNDQWNWDNIRETAAPV- 324 (370)
T ss_pred CCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCC----HHHHhcCcccCCCCcChHhcCCCCCCc-
Confidence 88888888887643 455665667999999999999855543 778 9999999999986664 333344443
Q ss_pred CCCCcccC
Q 002051 948 DAPLFATD 955 (975)
Q Consensus 948 ~~p~~~~~ 955 (975)
.|.+.+.
T Consensus 325 -~p~~~~~ 331 (370)
T cd05621 325 -VPELSSD 331 (370)
T ss_pred -CCCCCCc
Confidence 3444433
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-38 Score=351.98 Aligned_cols=237 Identities=41% Similarity=0.727 Sum_probs=202.5
Q ss_pred cccccCCceEEEEEEEeCCCeEEEEEEeccchh----------------------------ccccccCCeEEEEEeccCC
Q 002051 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM----------------------------LNRNKTKTHVCLITDYCPG 726 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~----------------------------~~~~~~~~~~~lV~Ey~~g 726 (975)
+.||+|+||+||+|+++.+|+.||+|++.+... .......+++|+|||||+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 469999999999999999999999999865311 0111256789999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcch
Q 002051 727 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 806 (975)
Q Consensus 727 gsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 806 (975)
|+|..++.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~--------- 149 (325)
T cd05604 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ--------- 149 (325)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC---------
Confidence 9999998764 56999999999999999999999999999999999999999999999999998542110
Q ss_pred hhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 002051 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 886 (975)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~ 886 (975)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+.+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~ 211 (325)
T cd05604 150 ------------------SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHK 211 (325)
T ss_pred ------------------CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcC
Confidence 01123457999999999999999999999999999999999999999998888888888776
Q ss_pred CCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhcc
Q 002051 887 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCM 942 (975)
Q Consensus 887 ~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~~ 942 (975)
...++. ..+..+.++|++||..||.+||+.+..+.+++.||||+.++|......
T Consensus 212 ~~~~~~--~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~~~~~~~~ 265 (325)
T cd05604 212 PLVLRP--GASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLSWTDLEQK 265 (325)
T ss_pred CccCCC--CCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCCHHHHHhC
Confidence 554433 478899999999999999999998778899999999999999876543
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=336.29 Aligned_cols=228 Identities=30% Similarity=0.549 Sum_probs=203.7
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLI 720 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV 720 (975)
..+|++.+.||+|.||.|.+|....+|+.||||.+++..+ +..+++.+.++||
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 4579999999999999999999999999999999887642 3334478889999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 800 (975)
|||..+|.|+||+... +.|++.+++.+++||+.|+.|||.++++|||||.+|||++.|+++||+|||++..+..+
T Consensus 132 MEYaS~GeLYDYiSer--~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~--- 206 (668)
T KOG0611|consen 132 MEYASGGELYDYISER--GSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK--- 206 (668)
T ss_pred EEecCCccHHHHHHHh--ccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccc---
Confidence 9999999999999885 67999999999999999999999999999999999999999999999999999665422
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCC-ChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT-SAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~-~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
....++||+|.|.+||+++|.+|. +.+|.||||++||-|++|.+||+|.+...+
T Consensus 207 -------------------------kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~l 261 (668)
T KOG0611|consen 207 -------------------------KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRL 261 (668)
T ss_pred -------------------------cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHH
Confidence 123478999999999999999984 689999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCcc
Q 002051 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932 (975)
Q Consensus 880 ~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~ 932 (975)
+.+|.++.+.-|.. +..+..||+.||..||++|.| +.+|-.|-|.+
T Consensus 262 vrQIs~GaYrEP~~---PSdA~gLIRwmLmVNP~RRAT----ieDiAsHWWvN 307 (668)
T KOG0611|consen 262 VRQISRGAYREPET---PSDASGLIRWMLMVNPERRAT----IEDIASHWWVN 307 (668)
T ss_pred HHHhhcccccCCCC---CchHHHHHHHHHhcCcccchh----HHHHhhhheee
Confidence 99999998876654 456789999999999999999 99999997753
|
|
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=348.10 Aligned_cols=236 Identities=40% Similarity=0.763 Sum_probs=198.9
Q ss_pred cccccCCceEEEEEEEeCCCeEEEEEEeccchh----------------------------ccccccCCeEEEEEeccCC
Q 002051 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM----------------------------LNRNKTKTHVCLITDYCPG 726 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~----------------------------~~~~~~~~~~~lV~Ey~~g 726 (975)
+.||+|+||+||+|.+..+++.||||++.+... ........++|+|||||+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 469999999999999999999999999875421 1111256789999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcch
Q 002051 727 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 806 (975)
Q Consensus 727 gsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 806 (975)
|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--------- 149 (318)
T cd05570 81 GDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG--------- 149 (318)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcC---------
Confidence 9999998764 46999999999999999999999999999999999999999999999999988532110
Q ss_pred hhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 002051 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 886 (975)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~ 886 (975)
.......+|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 150 ------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~ 211 (318)
T cd05570 150 ------------------GVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED 211 (318)
T ss_pred ------------------CCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC
Confidence 01123457899999999999999999999999999999999999999998888888888776
Q ss_pred CCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhc
Q 002051 887 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC 941 (975)
Q Consensus 887 ~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~ 941 (975)
...+|. .++..+.+||++||++||.+|||+. ....+++.||||+.++|.....
T Consensus 212 ~~~~~~--~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~~~~~~ 265 (318)
T cd05570 212 EVRYPR--WLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDWDKLER 265 (318)
T ss_pred CCCCCC--cCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHh
Confidence 665553 4788999999999999999999921 1129999999999999986543
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=350.59 Aligned_cols=255 Identities=44% Similarity=0.756 Sum_probs=199.4
Q ss_pred CcccccccccCCceEEEEEEEe---CCCeEEEEEEeccchhc-----------------------------cccccCCeE
Q 002051 670 HFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-----------------------------NRNKTKTHV 717 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~---~t~~~vAiK~l~~~~~~-----------------------------~~~~~~~~~ 717 (975)
+|++++.||+|+||.||+|++. .+++.||+|++.+.... ........+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 5899999999999999999874 47899999998653211 111246678
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|+|||||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~ 158 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSE 158 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCcccccc
Confidence 9999999999999999764 56999999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCC--
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGK-- 874 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~-- 874 (975)
. .......+||+.|+|||++.+. .++.++|||||||++|+|++|..||...
T Consensus 159 ~--------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~ 212 (332)
T cd05614 159 E--------------------------KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGE 212 (332)
T ss_pred C--------------------------CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCC
Confidence 0 0112245799999999999875 4788999999999999999999999643
Q ss_pred --CHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhccCCCCCCCCC
Q 002051 875 --TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPL 951 (975)
Q Consensus 875 --~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 951 (975)
........+......++ ..++..+.+||.+||+.||++||++. +.++++++||||+..+|........+....|.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~ 290 (332)
T cd05614 213 RNTQSEVSRRILKCDPPFP--SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDWEALALRKVNPPFRPS 290 (332)
T ss_pred CCCHHHHHHHHhcCCCCCC--CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCC
Confidence 22333344444443333 35788999999999999999999421 23999999999999999876543323223454
Q ss_pred ccc
Q 002051 952 FAT 954 (975)
Q Consensus 952 ~~~ 954 (975)
+..
T Consensus 291 ~~~ 293 (332)
T cd05614 291 IRN 293 (332)
T ss_pred CCC
Confidence 443
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=349.98 Aligned_cols=237 Identities=40% Similarity=0.761 Sum_probs=194.4
Q ss_pred cccccCCceEEEEEEEeCCCeEEEEEEeccchhc----------------------------cccccCCeEEEEEeccCC
Q 002051 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML----------------------------NRNKTKTHVCLITDYCPG 726 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~----------------------------~~~~~~~~~~lV~Ey~~g 726 (975)
+.||+|+||.||+|+++.+++.||+|++++.... .......++|||||||+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4699999999999999999999999998753210 111256788999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcch
Q 002051 727 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 806 (975)
Q Consensus 727 gsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 806 (975)
|+|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 81 g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~---------- 148 (329)
T cd05588 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR---------- 148 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCcccccccc----------
Confidence 9999998764 5699999999999999999999999999999999999999999999999999853210
Q ss_pred hhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCC---------CHH
Q 002051 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK---------TRQ 877 (975)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~---------~~~ 877 (975)
........+||+.|+|||++.+..++.++|||||||++|+|++|+.||... ...
T Consensus 149 -----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~ 211 (329)
T cd05588 149 -----------------PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTED 211 (329)
T ss_pred -----------------CCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchH
Confidence 001123457999999999999999999999999999999999999999631 112
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh--hhHHHHHcCCCccCCCcchhhcc
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH--EGANEIKKHPFFKGVNWALVRCM 942 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~--~~~~elL~Hp~f~~~~~~~~~~~ 942 (975)
.....+......+|. .++..+.+||++||++||.+|+|+. .+++++++||||..++|......
T Consensus 212 ~~~~~~~~~~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~~~~~~~ 276 (329)
T cd05588 212 YLFQVILEKQIRIPR--SLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDWDLLEQK 276 (329)
T ss_pred HHHHHHHcCCCCCCC--CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHhC
Confidence 234445555555443 4788999999999999999999843 34899999999999999877543
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-37 Score=344.23 Aligned_cols=283 Identities=57% Similarity=0.997 Sum_probs=226.9
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc---------------------------cccccCCeEEEEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML---------------------------NRNKTKTHVCLIT 721 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~---------------------------~~~~~~~~~~lV~ 721 (975)
++|++.+.||+|+||.||+|.+..+++.||+|.+.+.... .......++|+||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 3799999999999999999999999999999988754211 1122567889999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
||+.|++|.+++.......+++..++.++.||+.||.|||+.|++|+||||+|||++.++.++|+|||++..........
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV 160 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence 99999999999987655679999999999999999999999999999999999999999999999999987654322111
Q ss_pred CCcchhhhhcc-CC-CCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 802 LPTTNEKKRRH-KG-QQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 802 ~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
........... .. ................+.|+..|+|||++.+..++.++|||||||++|+|++|..||.+.+....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~ 240 (316)
T cd05574 161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDET 240 (316)
T ss_pred ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHH
Confidence 00000000000 00 00000011111233456899999999999998899999999999999999999999999888888
Q ss_pred HHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhccCCCCCCCCC
Q 002051 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPL 951 (975)
Q Consensus 880 ~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 951 (975)
+..+......++.....+..+.+||.+||..||++|||++..++++|.||||++.+|..+.-..+|.++.|.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (316)
T cd05574 241 FSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNWALIRHTTPPIIPRPD 312 (316)
T ss_pred HHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCChhhcccCCCCCCCCcc
Confidence 888887777777666678999999999999999999999999999999999999999999998888776554
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-38 Score=332.21 Aligned_cols=238 Identities=27% Similarity=0.415 Sum_probs=196.1
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------hc-----------------cccccCCe
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------ML-----------------NRNKTKTH 716 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------~~-----------------~~~~~~~~ 716 (975)
...|..++.||.|+||.|+.|.++.+|+.||||.+.... ++ .....-+.
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 345667899999999999999999999999999876321 00 01124567
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
+|+|+|+| +-+|..+++.. ..+++..+..+++||+.||.|+|+.||+||||||+|+|++.+..+||||||+|+..+.
T Consensus 101 vYiV~elM-etDL~~iik~~--~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~ 177 (359)
T KOG0660|consen 101 VYLVFELM-ETDLHQIIKSQ--QDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDK 177 (359)
T ss_pred eEEehhHH-hhHHHHHHHcC--ccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccc
Confidence 99999999 77999999874 4599999999999999999999999999999999999999999999999999987642
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhc-CCCCCChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
. ......+..+.|.+|+|||++. ...|+.+.||||+|||+.||++|++.|.|.+
T Consensus 178 ~-------------------------~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d 232 (359)
T KOG0660|consen 178 F-------------------------FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKD 232 (359)
T ss_pred c-------------------------CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCc
Confidence 2 0112234568899999999885 4679999999999999999999999999988
Q ss_pred HHHHHHHHHhc-----------------------CCCCC------CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 876 RQKTFANILHK-----------------------DLKFP------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 876 ~~~~~~~i~~~-----------------------~~~~p------~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
...++..|+.- ....| .....++.+.+|+.+||..||.+|+| ++|+|
T Consensus 233 ~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRit----a~eAL 308 (359)
T KOG0660|consen 233 YVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRIT----AEEAL 308 (359)
T ss_pred hHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCC----HHHHh
Confidence 88877766541 11111 12457889999999999999999999 99999
Q ss_pred cCCCccCCCcc
Q 002051 927 KHPFFKGVNWA 937 (975)
Q Consensus 927 ~Hp~f~~~~~~ 937 (975)
.||||......
T Consensus 309 ~hPYl~~~hdp 319 (359)
T KOG0660|consen 309 AHPYLAPYHDP 319 (359)
T ss_pred cChhhhhhcCC
Confidence 99999876443
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=331.28 Aligned_cols=238 Identities=27% Similarity=0.471 Sum_probs=197.2
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------ccc-------------cccC------
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------LNR-------------NKTK------ 714 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------~~~-------------~~~~------ 714 (975)
+..|..+++||.|+||+||+|+.+.+|+.||+|.++...- +.. ....
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 5579999999999999999999999999999998865421 000 0122
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCC
Q 002051 715 THVCLITDYCPGGELFLLLDRQPT--KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 792 (975)
Q Consensus 715 ~~~~lV~Ey~~ggsL~~~l~~~~~--~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~ 792 (975)
..+|+|+||+ .-+|..++..... ..++...++.+++||+.||+|||+++|+||||||.|||++.+|.+||+|||+|+
T Consensus 90 ~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAr 168 (323)
T KOG0594|consen 90 GKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLAR 168 (323)
T ss_pred ceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHH
Confidence 2789999999 7799999988643 358889999999999999999999999999999999999999999999999997
Q ss_pred ccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCC
Q 002051 793 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPF 871 (975)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf 871 (975)
.+... .......++|..|+|||++.+. .|+...||||+|||++||+++++.|
T Consensus 169 a~~ip---------------------------~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LF 221 (323)
T KOG0594|consen 169 AFSIP---------------------------MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLF 221 (323)
T ss_pred HhcCC---------------------------cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCC
Confidence 54421 1223456889999999999987 7899999999999999999999999
Q ss_pred CCCCHHHHHHHHHhc------------------CCCCCCC----------CCCcHHHHHHHHHhcccCccccCCChhhHH
Q 002051 872 RGKTRQKTFANILHK------------------DLKFPSS----------TPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 923 (975)
Q Consensus 872 ~~~~~~~~~~~i~~~------------------~~~~p~~----------~~~s~~~~~li~~~L~~dP~~R~t~~~~~~ 923 (975)
.+.+..+++..|.+. ...++.. ...+++..+++.+||+++|.+|+| ++
T Consensus 222 pG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~S----a~ 297 (323)
T KOG0594|consen 222 PGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRIS----AK 297 (323)
T ss_pred CCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcC----HH
Confidence 999998888888651 1111111 123357899999999999999999 99
Q ss_pred HHHcCCCccCCCcc
Q 002051 924 EIKKHPFFKGVNWA 937 (975)
Q Consensus 924 elL~Hp~f~~~~~~ 937 (975)
.+|.||||..+.-.
T Consensus 298 ~al~h~yf~~~~~~ 311 (323)
T KOG0594|consen 298 GALTHPYFSELPEK 311 (323)
T ss_pred HHhcChhhcccccc
Confidence 99999999987544
|
|
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=348.15 Aligned_cols=247 Identities=38% Similarity=0.701 Sum_probs=198.2
Q ss_pred cccccCCceEEEEEEEeCCCeEEEEEEeccchhc----------------------------cccccCCeEEEEEeccCC
Q 002051 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML----------------------------NRNKTKTHVCLITDYCPG 726 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~----------------------------~~~~~~~~~~lV~Ey~~g 726 (975)
+.||+|+||.||+|++..+++.||+|++.+.... .......++|+|||||+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999999999999999999754211 111256788999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcch
Q 002051 727 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 806 (975)
Q Consensus 727 gsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 806 (975)
|+|..++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~--------- 149 (327)
T cd05617 81 GDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP--------- 149 (327)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCC---------
Confidence 9999988764 56999999999999999999999999999999999999999999999999988532100
Q ss_pred hhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCC-------CHHHH
Q 002051 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK-------TRQKT 879 (975)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~-------~~~~~ 879 (975)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||... .....
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~ 211 (327)
T cd05617 150 ------------------GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYL 211 (327)
T ss_pred ------------------CCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHH
Confidence 01123467999999999999999999999999999999999999999532 22233
Q ss_pred HHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh--hhHHHHHcCCCccCCCcchhhccCCCCCCCCCc
Q 002051 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH--EGANEIKKHPFFKGVNWALVRCMNPPELDAPLF 952 (975)
Q Consensus 880 ~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~--~~~~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~ 952 (975)
...+......+| ..++..+.++|++||++||.+|+++. ..+.+++.||||+.++|..+.....+....|..
T Consensus 212 ~~~~~~~~~~~p--~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~~ 284 (327)
T cd05617 212 FQVILEKPIRIP--RFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWDLLEKKQVTPPFKPQI 284 (327)
T ss_pred HHHHHhCCCCCC--CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCHHHHHhCCCCCCccCCC
Confidence 444444444444 34788999999999999999999843 347899999999999999876544333333443
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-37 Score=348.43 Aligned_cols=246 Identities=38% Similarity=0.693 Sum_probs=201.0
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV~ 721 (975)
++|++++.||+|+||+||+++++.+++.||+|++.+... ........++|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 479999999999999999999999999999999865211 11122567899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
||++||+|.+++.+. ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--- 156 (331)
T cd05597 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG--- 156 (331)
T ss_pred ecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCC---
Confidence 999999999999753 3468999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-----CCCCChhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 876 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~ 876 (975)
.......+||+.|+|||++.. ..++.++|||||||++|+|++|+.||.+.+.
T Consensus 157 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~ 213 (331)
T cd05597 157 -----------------------TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL 213 (331)
T ss_pred -----------------------CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH
Confidence 011123469999999999963 4567899999999999999999999998888
Q ss_pred HHHHHHHHhcCC--CCCCC-CCCcHHHHHHHHHhcccCccc--cCCChhhHHHHHcCCCccCCCcchhhccCCC
Q 002051 877 QKTFANILHKDL--KFPSS-TPTSLHAKQLMYRLLHRDPKS--RLGSHEGANEIKKHPFFKGVNWALVRCMNPP 945 (975)
Q Consensus 877 ~~~~~~i~~~~~--~~p~~-~~~s~~~~~li~~~L~~dP~~--R~t~~~~~~elL~Hp~f~~~~~~~~~~~~~~ 945 (975)
.+.+..+..... .++.. ..++..+++||++||..++.+ |++ +.+++.||||.+++|..+....+|
T Consensus 214 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~----~~~~l~hp~~~~~~~~~~~~~~~~ 283 (331)
T cd05597 214 VETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNG----LQDFKDHPFFEGIDWDNIRNSTAP 283 (331)
T ss_pred HHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCC----HHHHhcCCCCCCCCHHHHhhCCCC
Confidence 777777765432 33322 347889999999999764433 667 999999999999999988766555
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=349.54 Aligned_cols=232 Identities=34% Similarity=0.575 Sum_probs=206.6
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhcc----------------------------ccccCCeEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN----------------------------RNKTKTHVCL 719 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~----------------------------~~~~~~~~~l 719 (975)
...|++.+.||+|.||.||+|+++.||+.||+|++.+..+.. .+.+..++|+
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 457999999999999999999999999999999998765422 1226778999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC----CcEEEeeccCCCccC
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN----GHVSLTDFDLSCLTS 795 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~----g~vkL~DFG~a~~~~ 795 (975)
|||+|.||.|++.+... . +++..+..++.||+.++.|||+.||+||||||+|+|+... +.+|++|||+|....
T Consensus 114 vmEL~~GGeLfd~i~~~--~-~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~ 190 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK--H-YSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIK 190 (382)
T ss_pred EEEecCCchHHHHHHHc--c-CCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEcc
Confidence 99999999999999876 3 9999999999999999999999999999999999999743 479999999997654
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
. .......+||+.|+|||++.+..|+..+||||+|+++|.|++|.+||.+.+
T Consensus 191 ~----------------------------~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~ 242 (382)
T KOG0032|consen 191 P----------------------------GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGET 242 (382)
T ss_pred C----------------------------CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCC
Confidence 2 123456799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCC--CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 876 RQKTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 876 ~~~~~~~i~~~~~~~p~--~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
....+.++..+.+.++. +..++..+++||++||..||.+|+| +.++|+|||+++.
T Consensus 243 ~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~t----a~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 243 EFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLT----AAQALQHPWIKSI 299 (382)
T ss_pred hhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCC----HHHHhcCccccCC
Confidence 99999999998876654 4668999999999999999999999 9999999998875
|
|
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=349.52 Aligned_cols=248 Identities=36% Similarity=0.659 Sum_probs=203.9
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV~ 721 (975)
++|+++++||+|+||.||+++++.+++.||+|++.+... .....+..++|+||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 479999999999999999999999999999999865311 01122567899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
|||++|+|.+++.+. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 81 ey~~~g~L~~~l~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~--- 156 (332)
T cd05623 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG--- 156 (332)
T ss_pred eccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCC---
Confidence 999999999999763 2468999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhc-----CCCCCChhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 876 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~ 876 (975)
.......+||+.|+|||++. ...++.++|||||||++|+|++|+.||.+.+.
T Consensus 157 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~ 213 (332)
T cd05623 157 -----------------------TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL 213 (332)
T ss_pred -----------------------cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH
Confidence 01122357999999999986 34578899999999999999999999999888
Q ss_pred HHHHHHHHhcCCC--CCCC-CCCcHHHHHHHHHhcccCccc--cCCChhhHHHHHcCCCccCCCcchhhccCCCCC
Q 002051 877 QKTFANILHKDLK--FPSS-TPTSLHAKQLMYRLLHRDPKS--RLGSHEGANEIKKHPFFKGVNWALVRCMNPPEL 947 (975)
Q Consensus 877 ~~~~~~i~~~~~~--~p~~-~~~s~~~~~li~~~L~~dP~~--R~t~~~~~~elL~Hp~f~~~~~~~~~~~~~~~~ 947 (975)
.+.+..+...... +|.. ..++..+++||++||..++.+ |++ ++++++||||.+++|..+.....|.+
T Consensus 214 ~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~----~~~~~~h~~f~~~~~~~~~~~~~~~~ 285 (332)
T cd05623 214 VETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNG----IEDFKQHPFFTGIDWDNIRNCEAPYI 285 (332)
T ss_pred HHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCC----HHHHhCCCCcCCCCHHHHhhCCCCcc
Confidence 8888888765433 3332 357899999999999765544 567 99999999999999998876665544
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=347.74 Aligned_cols=235 Identities=40% Similarity=0.711 Sum_probs=201.5
Q ss_pred cccccCCceEEEEEEEeCCCeEEEEEEeccchh----------------------------ccccccCCeEEEEEeccCC
Q 002051 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM----------------------------LNRNKTKTHVCLITDYCPG 726 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~----------------------------~~~~~~~~~~~lV~Ey~~g 726 (975)
+.||+|+||+||+|++..+++.||+|++.+... .......+++|+|||||+|
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 469999999999999999999999999865321 0111256788999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcch
Q 002051 727 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 806 (975)
Q Consensus 727 gsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 806 (975)
++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~--------- 149 (325)
T cd05602 81 GELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH--------- 149 (325)
T ss_pred CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccC---------
Confidence 9999999764 56889999999999999999999999999999999999999999999999998542110
Q ss_pred hhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 002051 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 886 (975)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~ 886 (975)
.......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+.+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~ 211 (325)
T cd05602 150 ------------------NGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK 211 (325)
T ss_pred ------------------CCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhC
Confidence 01123457999999999999999999999999999999999999999998888888888776
Q ss_pred CCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhh
Q 002051 887 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 940 (975)
Q Consensus 887 ~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~ 940 (975)
...++ ..++..+.++|.+||+.||.+|++..+.+.++++|+||..++|..+.
T Consensus 212 ~~~~~--~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~~~~~~ 263 (325)
T cd05602 212 PLQLK--PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINWDDLI 263 (325)
T ss_pred CcCCC--CCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCCHHHHH
Confidence 55443 35788999999999999999999988788899999999999998774
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=350.37 Aligned_cols=248 Identities=37% Similarity=0.659 Sum_probs=204.3
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV~ 721 (975)
++|++++.||+|+||.||+++++.+++.||+|++.+... .......+++||||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 479999999999999999999999999999999865311 11122577899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
|||+||+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 81 Ey~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~--- 156 (331)
T cd05624 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG--- 156 (331)
T ss_pred eCCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCC---
Confidence 999999999999763 2468999999999999999999999999999999999999999999999999986543110
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-----CCCCChhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 876 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~ 876 (975)
.......+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+.
T Consensus 157 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~ 213 (331)
T cd05624 157 -----------------------TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL 213 (331)
T ss_pred -----------------------ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH
Confidence 011123579999999999876 4578899999999999999999999998888
Q ss_pred HHHHHHHHhcCC--CCCCC-CCCcHHHHHHHHHhcccCccc--cCCChhhHHHHHcCCCccCCCcchhhccCCCCC
Q 002051 877 QKTFANILHKDL--KFPSS-TPTSLHAKQLMYRLLHRDPKS--RLGSHEGANEIKKHPFFKGVNWALVRCMNPPEL 947 (975)
Q Consensus 877 ~~~~~~i~~~~~--~~p~~-~~~s~~~~~li~~~L~~dP~~--R~t~~~~~~elL~Hp~f~~~~~~~~~~~~~~~~ 947 (975)
.+.+..+..... .+|.. ..++..+++||.+||..++.+ |++ ++++++||||++++|...+...+|.+
T Consensus 214 ~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~----~~~~~~h~~f~~~~~~~~~~~~~~~~ 285 (331)
T cd05624 214 VETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNG----IEDFKKHAFFEGIDWENIRNLEAPYI 285 (331)
T ss_pred HHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCC----HHHHhcCCCcCCCCHHHHhhCCCCcc
Confidence 888877776443 33332 346889999999999976544 345 99999999999999999887776655
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=353.77 Aligned_cols=239 Identities=36% Similarity=0.669 Sum_probs=200.3
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHV 717 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~ 717 (975)
.+..++|++.+.||+|+||.||+|+++.+++.||+|++.+... ........++
T Consensus 39 ~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (371)
T cd05622 39 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL 118 (371)
T ss_pred CcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence 4556899999999999999999999999999999999864221 1112256789
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|+|||||+||+|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 119 ~lv~Ey~~gg~L~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~ 195 (371)
T cd05622 119 YMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE 195 (371)
T ss_pred EEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcC
Confidence 999999999999999975 35899999999999999999999999999999999999999999999999998654311
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC----CCChhHHHHHHHHHHHHHhCCCCCCC
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGILLYEMLYGYTPFRG 873 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~----~~~k~DIWSLG~il~ell~G~~Pf~~ 873 (975)
. .......+||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+
T Consensus 196 ~--------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 249 (371)
T cd05622 196 G--------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 249 (371)
T ss_pred C--------------------------cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCC
Confidence 0 01123467999999999997643 78899999999999999999999999
Q ss_pred CCHHHHHHHHHhcC--CCCCCCCCCcHHHHHHHHHhcccCccc---cCCChhhHHHHHcCCCccCCCcc
Q 002051 874 KTRQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKS---RLGSHEGANEIKKHPFFKGVNWA 937 (975)
Q Consensus 874 ~~~~~~~~~i~~~~--~~~p~~~~~s~~~~~li~~~L~~dP~~---R~t~~~~~~elL~Hp~f~~~~~~ 937 (975)
.+....+..+.... ..+|....++..+++||.+||. +|.. |++ +.+|++||||++.+|.
T Consensus 250 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~-~~~~r~~r~~----~~ei~~h~~~~~~~~~ 313 (371)
T cd05622 250 DSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRLGRNG----VEEIKRHLFFKNDQWA 313 (371)
T ss_pred CCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcC-ChhhhcCCCC----HHHHhcCcccCCCChh
Confidence 88888888887643 4566666789999999999998 5555 556 9999999999987664
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=323.97 Aligned_cols=235 Identities=27% Similarity=0.437 Sum_probs=202.0
Q ss_pred CCCcccc-cccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEEe
Q 002051 668 LQHFRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITD 722 (975)
Q Consensus 668 ~~~y~i~-~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~E 722 (975)
.++|++- ++||-|-.|.|..|.++.|++.||+|++.... +.+.......+.||||
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE 139 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVME 139 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeee
Confidence 4566554 67999999999999999999999999875431 1223336778899999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec---CCcEEEeeccCCCccCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~---~g~vkL~DFG~a~~~~~~~~ 799 (975)
.|+||.|+..+..++...|++.++..|++||+.|+.|||+.+|.||||||+|+|+.. |..+||+|||+|+.-..
T Consensus 140 ~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~--- 216 (400)
T KOG0604|consen 140 CMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQE--- 216 (400)
T ss_pred cccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCC---
Confidence 999999999999988888999999999999999999999999999999999999975 44699999999965321
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCH---
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR--- 876 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~--- 876 (975)
.....+.|-||.|.|||++....|+..+|+||+|+++|-|++|++||.....
T Consensus 217 -------------------------~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ai 271 (400)
T KOG0604|consen 217 -------------------------PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 271 (400)
T ss_pred -------------------------CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccC
Confidence 1223456889999999999999999999999999999999999999987554
Q ss_pred -HHHHHHHHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 877 -QKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 877 -~~~~~~i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
..+-.+|..+.+.||.+ ..+|..++++|+++|..+|.+|+| +.+++.|||+.+.
T Consensus 272 spgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlT----I~~~m~hpwi~~~ 328 (400)
T KOG0604|consen 272 SPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLT----IEEVMDHPWINQY 328 (400)
T ss_pred ChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhhee----HHHhhcCchhccc
Confidence 34566788888888876 558999999999999999999999 9999999999854
|
|
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-37 Score=345.26 Aligned_cols=236 Identities=42% Similarity=0.748 Sum_probs=200.8
Q ss_pred cccccCCceEEEEEEEeCCCeEEEEEEeccchh----------------------------ccccccCCeEEEEEeccCC
Q 002051 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM----------------------------LNRNKTKTHVCLITDYCPG 726 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~----------------------------~~~~~~~~~~~lV~Ey~~g 726 (975)
+.||+|+||.||+|++..+++.||+|++.+... .....+...+|+|||||+|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 469999999999999999999999999865321 0111256788999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcch
Q 002051 727 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 806 (975)
Q Consensus 727 gsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 806 (975)
++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~--------- 149 (321)
T cd05603 81 GELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP--------- 149 (321)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCC---------
Confidence 9999988764 56899999999999999999999999999999999999999999999999988542100
Q ss_pred hhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 002051 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 886 (975)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~ 886 (975)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~ 211 (321)
T cd05603 150 ------------------EETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK 211 (321)
T ss_pred ------------------CCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC
Confidence 01123457999999999999989999999999999999999999999998888888888776
Q ss_pred CCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhc
Q 002051 887 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRC 941 (975)
Q Consensus 887 ~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~ 941 (975)
...+|. ..+..+.++|.+||++||.+|++....+.++++|+||..++|..+..
T Consensus 212 ~~~~~~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (321)
T cd05603 212 PLQLPG--GKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINWDDLYH 264 (321)
T ss_pred CCCCCC--CCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCCHHHHhc
Confidence 655543 46789999999999999999999766688999999999999987643
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-37 Score=345.71 Aligned_cols=236 Identities=40% Similarity=0.755 Sum_probs=193.2
Q ss_pred cccccCCceEEEEEEEeCCCeEEEEEEeccchh----------------------------ccccccCCeEEEEEeccCC
Q 002051 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM----------------------------LNRNKTKTHVCLITDYCPG 726 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~----------------------------~~~~~~~~~~~lV~Ey~~g 726 (975)
+.||+|+||.||+|++..+++.||+|++++... ........++|+|||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 469999999999999999999999999875421 0111256789999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcch
Q 002051 727 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 806 (975)
Q Consensus 727 gsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 806 (975)
|+|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~--------- 149 (329)
T cd05618 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP--------- 149 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCC---------
Confidence 9999988764 56999999999999999999999999999999999999999999999999998542110
Q ss_pred hhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCC---------CCHH
Q 002051 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG---------KTRQ 877 (975)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~---------~~~~ 877 (975)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.. ....
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~ 211 (329)
T cd05618 150 ------------------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED 211 (329)
T ss_pred ------------------CCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHH
Confidence 0112345799999999999999999999999999999999999999952 1122
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh--hhHHHHHcCCCccCCCcchhhc
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH--EGANEIKKHPFFKGVNWALVRC 941 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~--~~~~elL~Hp~f~~~~~~~~~~ 941 (975)
.....+......+|. ..+..+.+||++||++||.+|+++. ..+.++++||||++++|.....
T Consensus 212 ~~~~~i~~~~~~~p~--~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~~~~~~ 275 (329)
T cd05618 212 YLFQVILEKQIRIPR--SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDLMEQ 275 (329)
T ss_pred HHHHHHhcCCCCCCC--CCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHc
Confidence 234445555555543 4688999999999999999999843 2368999999999999986643
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=322.16 Aligned_cols=267 Identities=37% Similarity=0.693 Sum_probs=222.8
Q ss_pred cccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhccc----------------------------cccC
Q 002051 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR----------------------------NKTK 714 (975)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~~----------------------------~~~~ 714 (975)
.+.+..++|.++++||+|+|..|.++++++|.+.||+|+++++.+.+. ++..
T Consensus 244 ~~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqte 323 (593)
T KOG0695|consen 244 SQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTE 323 (593)
T ss_pred ccccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhccc
Confidence 455778899999999999999999999999999999999998753222 2256
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCcc
Q 002051 715 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 794 (975)
Q Consensus 715 ~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~ 794 (975)
..+++|.||++||+|.-.++++ ..++++.++.+...|+.||.|||++|||.||||.+|+|++..|++||+|+|+++..
T Consensus 324 srlffvieyv~ggdlmfhmqrq--rklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~ 401 (593)
T KOG0695|consen 324 SRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 401 (593)
T ss_pred ceEEEEEEEecCcceeeehhhh--hcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcC
Confidence 7789999999999999888775 67999999999999999999999999999999999999999999999999998542
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCC-
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG- 873 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~- 873 (975)
- .+.....++||||.|.|||++++..|+..+|.|+||++++||+.|+.||.-
T Consensus 402 l---------------------------~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdiv 454 (593)
T KOG0695|consen 402 L---------------------------GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIV 454 (593)
T ss_pred C---------------------------CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCccee
Confidence 1 122345689999999999999999999999999999999999999999952
Q ss_pred -------CCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh--hhHHHHHcCCCccCCCcchhhccCC
Q 002051 874 -------KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH--EGANEIKKHPFFKGVNWALVRCMNP 944 (975)
Q Consensus 874 -------~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~--~~~~elL~Hp~f~~~~~~~~~~~~~ 944 (975)
++..-.++-|+...+..|.. +|-.+..+++..|++||.+|+.++ ..+.++..|+||+.+||..+.....
T Consensus 455 gm~n~d~ntedylfqvilekqiriprs--lsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~leqk~v 532 (593)
T KOG0695|consen 455 GMDNPDMNTEDYLFQVILEKQIRIPRS--LSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQKQV 532 (593)
T ss_pred cCCCcccchhHHHHHHHhhhcccccce--eehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHhhccc
Confidence 33344566677777777765 566778999999999999999986 3689999999999999998744332
Q ss_pred CCCCCCCcccCccccc
Q 002051 945 PELDAPLFATDTEKEY 960 (975)
Q Consensus 945 ~~~~~p~~~~~~~~~~ 960 (975)
-....|..+.+.....
T Consensus 533 ~ppf~p~i~~d~~l~~ 548 (593)
T KOG0695|consen 533 LPPFQPQITDDYGLDN 548 (593)
T ss_pred CCCCCCccccccCccc
Confidence 2224576666555443
|
|
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=337.38 Aligned_cols=238 Identities=32% Similarity=0.498 Sum_probs=210.7
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc--------------------------cccccCCeEEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--------------------------NRNKTKTHVCLIT 721 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~--------------------------~~~~~~~~~~lV~ 721 (975)
.+-|.+.+.||+|.|..|.+|+|..||..||||++++..+- ........+|||+
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 35699999999999999999999999999999999886421 2222678899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe-cCCcEEEeeccCCCccCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~-~~g~vkL~DFG~a~~~~~~~~~ 800 (975)
|+-.+|+|++||.++. ..+.++.+++++.||+.|+.|||+..+|||||||+|+.+. .-|-|||.|||++..+.
T Consensus 97 ELGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~----- 170 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ----- 170 (864)
T ss_pred EecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCC-----
Confidence 9999999999999874 4599999999999999999999999999999999999876 56899999999985543
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCC-ChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT-SAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~-~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
+.....+.||+..|-|||+++|..|+ +++||||||+|||.|++|++||...+..+.
T Consensus 171 -----------------------PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET 227 (864)
T KOG4717|consen 171 -----------------------PGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET 227 (864)
T ss_pred -----------------------CcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh
Confidence 12344678999999999999999887 479999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhh
Q 002051 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 940 (975)
Q Consensus 880 ~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~ 940 (975)
+-.|+...+..|. .+|.+|++||..||..||.+|.+ +++|..|+|++.+|-...-
T Consensus 228 LTmImDCKYtvPs--hvS~eCrdLI~sMLvRdPkkRAs----lEeI~s~~Wlq~~D~~~sT 282 (864)
T KOG4717|consen 228 LTMIMDCKYTVPS--HVSKECRDLIQSMLVRDPKKRAS----LEEIVSTSWLQAGDRGLST 282 (864)
T ss_pred hhhhhcccccCch--hhhHHHHHHHHHHHhcCchhhcc----HHHHhccccccCCCCCccc
Confidence 9999998887765 47999999999999999999999 9999999999998766443
|
|
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-37 Score=343.76 Aligned_cols=237 Identities=45% Similarity=0.800 Sum_probs=198.7
Q ss_pred ccccccCCceEEEEEEEe---CCCeEEEEEEeccchh----------------------------ccccccCCeEEEEEe
Q 002051 674 IKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVM----------------------------LNRNKTKTHVCLITD 722 (975)
Q Consensus 674 ~~~LG~G~fG~Vy~a~~~---~t~~~vAiK~l~~~~~----------------------------~~~~~~~~~~~lV~E 722 (975)
++.||+|+||.||+|++. .+++.||+|++++... ........++|+|||
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence 468999999999999874 4789999999875321 111225678999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
|++|++|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----- 153 (323)
T cd05584 81 YLSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE----- 153 (323)
T ss_pred CCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC-----
Confidence 99999999999774 56899999999999999999999999999999999999999999999999998542110
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 882 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~ 882 (975)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..
T Consensus 154 ----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~ 211 (323)
T cd05584 154 ----------------------GTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDK 211 (323)
T ss_pred ----------------------CCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 0112345799999999999998899999999999999999999999999888888888
Q ss_pred HHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhc
Q 002051 883 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC 941 (975)
Q Consensus 883 i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~ 941 (975)
+......+|. .++..+.+||++||++||++||+.. ..+.+++.||||+..+|..+..
T Consensus 212 ~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~~~~~~~ 269 (323)
T cd05584 212 ILKGKLNLPP--YLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNWDDLLA 269 (323)
T ss_pred HHcCCCCCCC--CCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCCCHHHHhc
Confidence 8877665554 4688999999999999999999321 1299999999999999987744
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-37 Score=360.92 Aligned_cols=231 Identities=24% Similarity=0.400 Sum_probs=186.2
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-----------h------------------cccc-ccCCe
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-----------M------------------LNRN-KTKTH 716 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-----------~------------------~~~~-~~~~~ 716 (975)
..++|+++++||+|+||+||+|.+..+++.||||+++... + .... ....+
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~ 206 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGH 206 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCce
Confidence 4578999999999999999999999999999999985321 0 0000 13467
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCC--------------
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNG-------------- 781 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~-~gIiHrDIKp~NILl~~~g-------------- 781 (975)
+|||||++ |++|.+++.+. +.+++..++.|+.||+.||.|||+ .|||||||||+|||++.++
T Consensus 207 ~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~ 283 (467)
T PTZ00284 207 MCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPD 283 (467)
T ss_pred EEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCC
Confidence 99999999 88999998764 569999999999999999999998 5999999999999998765
Q ss_pred --cEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHH
Q 002051 782 --HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGI 859 (975)
Q Consensus 782 --~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~ 859 (975)
.+||+|||.+.... ......+||+.|+|||++.+..|+.++|||||||
T Consensus 284 ~~~vkl~DfG~~~~~~------------------------------~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGv 333 (467)
T PTZ00284 284 PCRVRICDLGGCCDER------------------------------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGC 333 (467)
T ss_pred CceEEECCCCccccCc------------------------------cccccccCCccccCcHHhhcCCCCcHHHHHHHHH
Confidence 49999999874321 1123468999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCC----------------------------------------CCCCcHH
Q 002051 860 LLYEMLYGYTPFRGKTRQKTFANILHKDLKFPS----------------------------------------STPTSLH 899 (975)
Q Consensus 860 il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~----------------------------------------~~~~s~~ 899 (975)
++|+|++|++||.+.+..+.+..+......+|. ....+..
T Consensus 334 il~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (467)
T PTZ00284 334 IIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDL 413 (467)
T ss_pred HHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHH
Confidence 999999999999987766655444321111100 0012356
Q ss_pred HHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 900 AKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 900 ~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
+.+||.+||++||.+||| ++|+|+||||...
T Consensus 414 ~~dli~~mL~~dP~~R~t----a~e~L~Hp~~~~~ 444 (467)
T PTZ00284 414 LCDLIYGLLHYDRQKRLN----ARQMTTHPYVLKY 444 (467)
T ss_pred HHHHHHHhCCcChhhCCC----HHHHhcCcccccc
Confidence 789999999999999999 9999999999853
|
|
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=335.10 Aligned_cols=246 Identities=34% Similarity=0.589 Sum_probs=198.5
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEEEe
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLITD 722 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV~E 722 (975)
.|++.+.||+|+||+||++.+..+++.||+|++.+... ........++|+|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 48899999999999999999999999999999864311 111125678999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
||++|+|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~----- 155 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG----- 155 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC-----
Confidence 999999999887654457999999999999999999999999999999999999999999999999998543211
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 882 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~ 882 (975)
......+|++.|+|||++.+..++.++||||+||++|+|++|..||.+.........
T Consensus 156 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~ 212 (285)
T cd05605 156 -----------------------ETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREE 212 (285)
T ss_pred -----------------------CccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHH
Confidence 011234789999999999988899999999999999999999999988665443333
Q ss_pred HHhc--CCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhccC
Q 002051 883 ILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMN 943 (975)
Q Consensus 883 i~~~--~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~~~ 943 (975)
+... .........++..+.+||.+||..||.+||++. ..+++++.||||...+|..+....
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 276 (285)
T cd05605 213 VERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFKRLEAGM 276 (285)
T ss_pred HHHHhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCHHHHhhCC
Confidence 2221 111122234788999999999999999999321 129999999999999999875533
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=334.74 Aligned_cols=231 Identities=26% Similarity=0.384 Sum_probs=186.2
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEEEEEe
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCLITD 722 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~lV~E 722 (975)
++|++.+.||+|+||.||+|+++.+++.||+|++..... ........++|+|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 479999999999999999999999999999998864311 111225678999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
|++++.+..+... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 81 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 154 (287)
T cd07848 81 YVEKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS---- 154 (287)
T ss_pred cCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccc----
Confidence 9988766555433 3568999999999999999999999999999999999999999999999999986543110
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 882 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~ 882 (975)
........|++.|+|||++.+..++.++|||||||++|+|++|++||.+.+..+.+..
T Consensus 155 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~ 212 (287)
T cd07848 155 ----------------------NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFT 212 (287)
T ss_pred ----------------------cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 0111235689999999999998899999999999999999999999988766555444
Q ss_pred HHhcC-------------------CCCCCC-----------CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 883 ILHKD-------------------LKFPSS-----------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 883 i~~~~-------------------~~~p~~-----------~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
+.... ..++.. ..+|..+.+||++||++||++||| ++++|+||||
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s----~~~~l~hp~f 287 (287)
T cd07848 213 IQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYL----TEQCLNHPAF 287 (287)
T ss_pred HHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCC----HHHHhcCCCC
Confidence 33211 011110 125778999999999999999999 9999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=332.71 Aligned_cols=240 Identities=32% Similarity=0.563 Sum_probs=195.8
Q ss_pred cccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEEEeccCCCCH
Q 002051 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLITDYCPGGEL 729 (975)
Q Consensus 677 LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV~Ey~~ggsL 729 (975)
||+|+||.||++.++.+|+.||+|.+.+..+ ........++|+||||++|++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 7999999999999999999999998864321 1112256789999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhh
Q 002051 730 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 809 (975)
Q Consensus 730 ~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 809 (975)
.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~------------ 148 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG------------ 148 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC------------
Confidence 99887655556899999999999999999999999999999999999999999999999998553211
Q ss_pred hccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHh
Q 002051 810 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR----QKTFANILH 885 (975)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~----~~~~~~i~~ 885 (975)
.......|++.|+|||++.+..++.++|||||||++|+|++|+.||..... .........
T Consensus 149 ----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~ 212 (277)
T cd05607 149 ----------------KTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLE 212 (277)
T ss_pred ----------------ceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhc
Confidence 011234689999999999998899999999999999999999999976432 233333444
Q ss_pred cCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhccCCC
Q 002051 886 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPP 945 (975)
Q Consensus 886 ~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~~~~~ 945 (975)
....++. ..++.++++||++||++||.+||++.+..++++.||||++++|........+
T Consensus 213 ~~~~~~~-~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~~~~~~~~~~ 271 (277)
T cd05607 213 DEVKFEH-QNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINFPRLEAGLIP 271 (277)
T ss_pred ccccccc-ccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCCHHHHhcCcCC
Confidence 3333322 3578899999999999999999997666789999999999999888764333
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=343.83 Aligned_cols=234 Identities=24% Similarity=0.451 Sum_probs=208.3
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc--------------------------cccc-cCCeEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--------------------------NRNK-TKTHVCLI 720 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~--------------------------~~~~-~~~~~~lV 720 (975)
+++|..++++|+|+||.+++++++..++.|++|.+...... +.+. +..++|||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 57899999999999999999999999999999998754321 1122 34459999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 800 (975)
|+||+||+|.+.+.+..+..++++.+..++.||+.||.|||+++|+|||||+.|||++.++.|||+|||+|+.+...
T Consensus 83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~--- 159 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE--- 159 (426)
T ss_pred EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCc---
Confidence 99999999999999876678999999999999999999999999999999999999999999999999999876522
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~ 880 (975)
.....+.+|||.||+||++.+.+|+.|+|||||||++|||++-+++|.+.+.....
T Consensus 160 ------------------------~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li 215 (426)
T KOG0589|consen 160 ------------------------DSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELI 215 (426)
T ss_pred ------------------------hhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHH
Confidence 12345689999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 881 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 881 ~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
.+|.+.. -.|.+...+.+++.+|+.||..+|..||+ +.+||.+|....
T Consensus 216 ~ki~~~~-~~Plp~~ys~el~~lv~~~l~~~P~~RPs----a~~LL~~P~l~~ 263 (426)
T KOG0589|consen 216 LKINRGL-YSPLPSMYSSELRSLVKSMLRKNPEHRPS----ALELLRRPHLLR 263 (426)
T ss_pred HHHhhcc-CCCCCccccHHHHHHHHHHhhcCCccCCC----HHHHhhChhhhh
Confidence 9998876 44556678999999999999999999999 999999988763
|
|
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=333.09 Aligned_cols=236 Identities=32% Similarity=0.602 Sum_probs=190.5
Q ss_pred cccCCceEEEEEEEeCCCeEEEEEEeccchhc---------------------------cccccCCeEEEEEeccCCCCH
Q 002051 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVML---------------------------NRNKTKTHVCLITDYCPGGEL 729 (975)
Q Consensus 677 LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~---------------------------~~~~~~~~~~lV~Ey~~ggsL 729 (975)
||+|+||+||+|.++.+++.||+|.+.+.... .......++|+|||||+||+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 79999999999999999999999998643211 111256779999999999999
Q ss_pred HHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchh
Q 002051 730 FLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 807 (975)
Q Consensus 730 ~~~l~~~--~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 807 (975)
.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++.......
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~--------- 151 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ--------- 151 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCC---------
Confidence 9887532 23568999999999999999999999999999999999999999999999999985532110
Q ss_pred hhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHH
Q 002051 808 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ----KTFANI 883 (975)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~----~~~~~i 883 (975)
.......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... .....+
T Consensus 152 ------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 213 (280)
T cd05608 152 ------------------SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRI 213 (280)
T ss_pred ------------------ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhh
Confidence 1122357899999999999999999999999999999999999999765432 222233
Q ss_pred HhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChh-hHHHHHcCCCccCCCcchhhc
Q 002051 884 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVRC 941 (975)
Q Consensus 884 ~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~-~~~elL~Hp~f~~~~~~~~~~ 941 (975)
......+ ...++..+.+|+.+||+.||++||+... +++++++||||++++|..+..
T Consensus 214 ~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~ 270 (280)
T cd05608 214 LNDSVTY--PDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWRQLEA 270 (280)
T ss_pred cccCCCC--cccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCHhHHhh
Confidence 3332222 2357889999999999999999995433 499999999999999997644
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=334.30 Aligned_cols=232 Identities=25% Similarity=0.413 Sum_probs=188.5
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-------------------------ccccccCCeEEEEE
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-------------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-------------------------~~~~~~~~~~~lV~ 721 (975)
.+++|+++++||.|+||.||+|.+..+++.||+|+++.... ........++|+||
T Consensus 3 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (288)
T cd07871 3 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVF 82 (288)
T ss_pred ccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence 35789999999999999999999999999999998864311 11122567789999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
||+. ++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 83 e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~---- 156 (288)
T cd07871 83 EYLD-SDLKQYLDNC-GNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVP---- 156 (288)
T ss_pred eCCC-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCC----
Confidence 9996 5999988754 345889999999999999999999999999999999999999999999999998543211
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~ 880 (975)
........|++.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+
T Consensus 157 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~ 213 (288)
T cd07871 157 -----------------------TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEEL 213 (288)
T ss_pred -----------------------CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 011123468999999999876 56889999999999999999999999988777666
Q ss_pred HHHHhcCC-------------------CCCC---------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 881 ANILHKDL-------------------KFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 881 ~~i~~~~~-------------------~~p~---------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
..+..... .+|. ...++.++++||++||++||.+||| ++|+|+||||
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t----~~~~l~hp~f 288 (288)
T cd07871 214 HLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRIS----AEAALRHSYF 288 (288)
T ss_pred HHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCC----HHHHhcCCCC
Confidence 55543110 0111 1245788999999999999999999 9999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=337.09 Aligned_cols=237 Identities=25% Similarity=0.433 Sum_probs=187.0
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-------------------------hccccccCCeEEEEEe
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------------------MLNRNKTKTHVCLITD 722 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------------------~~~~~~~~~~~~lV~E 722 (975)
.++|+++++||.|+||.||+|+++.+++.||||++.... +........++|+|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999999999999999986431 0112225678999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
|| +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 84 ~~-~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 157 (303)
T cd07869 84 YV-HTDLCQYMDKH-PGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS---- 157 (303)
T ss_pred CC-CcCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC----
Confidence 99 57888888764 3568999999999999999999999999999999999999999999999999985432110
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCCH-HHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTR-QKTF 880 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~~-~~~~ 880 (975)
.......|++.|+|||++.+. .++.++|||||||++|+|++|..||.+... ...+
T Consensus 158 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~ 214 (303)
T cd07869 158 -----------------------HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQL 214 (303)
T ss_pred -----------------------ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHH
Confidence 111234689999999998764 578899999999999999999999987543 2333
Q ss_pred HHHHhc--CC---------CC------------CC-------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCC
Q 002051 881 ANILHK--DL---------KF------------PS-------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930 (975)
Q Consensus 881 ~~i~~~--~~---------~~------------p~-------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~ 930 (975)
..+... .. .. +. ....+..+.+||++||++||.+||| +.|+|+|||
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s----~~~~l~h~~ 290 (303)
T cd07869 215 ERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLS----AQAALSHEY 290 (303)
T ss_pred HHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccC----HHHHhcCcc
Confidence 333210 00 00 00 0123467899999999999999999 999999999
Q ss_pred ccCCCcc
Q 002051 931 FKGVNWA 937 (975)
Q Consensus 931 f~~~~~~ 937 (975)
|+++++.
T Consensus 291 f~~~~~~ 297 (303)
T cd07869 291 FSDLPPR 297 (303)
T ss_pred cccCChh
Confidence 9988653
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=329.71 Aligned_cols=235 Identities=26% Similarity=0.481 Sum_probs=194.4
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc------------------------cccc-cCCeEEEEEecc
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML------------------------NRNK-TKTHVCLITDYC 724 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~------------------------~~~~-~~~~~~lV~Ey~ 724 (975)
.|.-.+.+|.|+||.||.|....+++.||||..-...-. .... +.-++.+|||||
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleym 104 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYM 104 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhc
Confidence 588899999999999999999999999999976433200 0000 234667999999
Q ss_pred CCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC-CcEEEeeccCCCccCCCCCCC
Q 002051 725 PGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 725 ~ggsL~~~l~~~--~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~-g~vkL~DFG~a~~~~~~~~~~ 801 (975)
+ .+|+.+++.. .+..++.-.++.+.+||+.||.|||+.||+||||||.|||+|.+ |.+||||||.|+.+..+
T Consensus 105 P-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~---- 179 (364)
T KOG0658|consen 105 P-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKG---- 179 (364)
T ss_pred h-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeeccC----
Confidence 5 5999999841 23568999999999999999999999999999999999999965 89999999999775422
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~ 880 (975)
.++.+...|..|+|||.+.|. .|+.+.||||.||++.||+.|++.|.|.+..+++
T Consensus 180 ------------------------epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL 235 (364)
T KOG0658|consen 180 ------------------------EPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQL 235 (364)
T ss_pred ------------------------CCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHH
Confidence 234567789999999999885 5899999999999999999999999999999888
Q ss_pred HHHHhc-----------------CCCCCC----------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 881 ANILHK-----------------DLKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 881 ~~i~~~-----------------~~~~p~----------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
..|++- ...+|. ....++++.+|+.++|+++|.+|.+ +.|+|.||||..
T Consensus 236 ~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~----~~~~l~h~fFde 311 (364)
T KOG0658|consen 236 VEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLS----ALEALAHPFFDE 311 (364)
T ss_pred HHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCC----HHHHhcchhhHH
Confidence 887651 111221 2346889999999999999999999 999999999997
Q ss_pred CCcc
Q 002051 934 VNWA 937 (975)
Q Consensus 934 ~~~~ 937 (975)
+.-.
T Consensus 312 lr~~ 315 (364)
T KOG0658|consen 312 LRDP 315 (364)
T ss_pred hhCc
Confidence 7554
|
|
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=339.91 Aligned_cols=238 Identities=43% Similarity=0.783 Sum_probs=201.0
Q ss_pred ccccccCCceEEEEEEEe---CCCeEEEEEEeccchh--------------------------ccccccCCeEEEEEecc
Q 002051 674 IKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCLITDYC 724 (975)
Q Consensus 674 ~~~LG~G~fG~Vy~a~~~---~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~lV~Ey~ 724 (975)
++.||+|+||.||++++. .+|+.||+|++.+... ........++|+|||||
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 80 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL 80 (318)
T ss_pred CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC
Confidence 367999999999999874 5789999999875321 11122567899999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCc
Q 002051 725 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 804 (975)
Q Consensus 725 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~ 804 (975)
++|+|.+++.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~------- 151 (318)
T cd05582 81 RGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH------- 151 (318)
T ss_pred CCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC-------
Confidence 999999999764 56899999999999999999999999999999999999999999999999998543211
Q ss_pred chhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 002051 805 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANIL 884 (975)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~ 884 (975)
.......+|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+.
T Consensus 152 --------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~ 211 (318)
T cd05582 152 --------------------EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMIL 211 (318)
T ss_pred --------------------CCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHH
Confidence 011234579999999999999889999999999999999999999999988888888887
Q ss_pred hcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChh-hHHHHHcCCCccCCCcchhhcc
Q 002051 885 HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVRCM 942 (975)
Q Consensus 885 ~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~-~~~elL~Hp~f~~~~~~~~~~~ 942 (975)
.....+|. .++..+.+||++||++||.+||++.+ .+.+++.||||..++|..+...
T Consensus 212 ~~~~~~p~--~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (318)
T cd05582 212 KAKLGMPQ--FLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDWNKLYRR 268 (318)
T ss_pred cCCCCCCC--CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCHHHHHhc
Confidence 77665554 46889999999999999999999543 4788999999999999877543
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-37 Score=339.24 Aligned_cols=237 Identities=27% Similarity=0.433 Sum_probs=202.5
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEEecc
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITDYC 724 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~Ey~ 724 (975)
+.|.|+..||.|+||.||+|..+.++-..|-|++.... ++..+...+.++|+.|||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence 35789999999999999999999999888888875321 223334678899999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCc
Q 002051 725 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 804 (975)
Q Consensus 725 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~ 804 (975)
.||-+..++... ...|.+.++..+++|+|.||.|||+++|||||||..|||++-+|.++|+|||++.....
T Consensus 112 ~GGAVDaimlEL-~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~-------- 182 (1187)
T KOG0579|consen 112 GGGAVDAIMLEL-GRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS-------- 182 (1187)
T ss_pred CCchHhHHHHHh-ccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchh--------
Confidence 999888887665 46799999999999999999999999999999999999999999999999999843210
Q ss_pred chhhhhccCCCCCcccccccccccccccCCCCccchhhhc-----CCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 805 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
......+++|||+|||||++. ..+|++++||||||++|.+|..+.+|-...++..+
T Consensus 183 -------------------t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRV 243 (1187)
T KOG0579|consen 183 -------------------TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV 243 (1187)
T ss_pred -------------------HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHH
Confidence 112345789999999999874 56899999999999999999999999999999888
Q ss_pred HHHHHhcCC-CCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcc
Q 002051 880 FANILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 937 (975)
Q Consensus 880 ~~~i~~~~~-~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~ 937 (975)
+-+|..... .+..+..++..+.|||++||.+||..||+ +.+||+||||.+++..
T Consensus 244 llKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~----aaqll~Hpfv~~~~Sn 298 (1187)
T KOG0579|consen 244 LLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPP----AAQLLKHPFVQNAPSN 298 (1187)
T ss_pred HHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCC----HHHHhhCcccccCCcc
Confidence 888876543 34455668889999999999999999999 9999999999988765
|
|
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-36 Score=331.01 Aligned_cols=230 Identities=27% Similarity=0.462 Sum_probs=188.4
Q ss_pred CCcccccccccCCceEEEEEEEeC-CCeEEEEEEeccchh--------------cc------c--------------ccc
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGVM--------------LN------R--------------NKT 713 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~-t~~~vAiK~l~~~~~--------------~~------~--------------~~~ 713 (975)
.+|++++.||+|+||.||+|.+.. +++.||+|.++.... +. . ...
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 379999999999999999999864 578899998763210 00 0 012
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 714 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 714 ~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
...+|+||||+. ++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 159 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI 159 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEe
Confidence 456899999994 6999999876556789999999999999999999999999999999999999999999999999855
Q ss_pred cCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCC
Q 002051 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 873 (975)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~ 873 (975)
.... .......||+.|+|||++.+..++.++|||||||++|+|++|.+||.+
T Consensus 160 ~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 211 (290)
T cd07862 160 YSFQ----------------------------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG 211 (290)
T ss_pred ccCC----------------------------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCC
Confidence 3211 112345689999999999988899999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCC-----CCCC--------------------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 874 KTRQKTFANILHKDL-----KFPS--------------------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 874 ~~~~~~~~~i~~~~~-----~~p~--------------------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
.+..+.+..+..... .++. ...++..+.+||.+||++||++||| +.++|+|
T Consensus 212 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s----~~~~l~h 287 (290)
T cd07862 212 SSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS----AYSALSH 287 (290)
T ss_pred CCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCC----HHHHhcC
Confidence 888777777654211 0000 0235778899999999999999999 9999999
Q ss_pred CCc
Q 002051 929 PFF 931 (975)
Q Consensus 929 p~f 931 (975)
|||
T Consensus 288 p~f 290 (290)
T cd07862 288 PYF 290 (290)
T ss_pred CCC
Confidence 998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=352.56 Aligned_cols=239 Identities=25% Similarity=0.433 Sum_probs=189.9
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-----------------hc---cc--------cccCCeE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-----------------ML---NR--------NKTKTHV 717 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-----------------~~---~~--------~~~~~~~ 717 (975)
...++|++++.||+|+||.||+|.+..+++.||||.+.... ++ .. .....++
T Consensus 63 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 142 (440)
T PTZ00036 63 SPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFL 142 (440)
T ss_pred CcCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEE
Confidence 34568999999999999999999999999999999875421 00 00 0112357
Q ss_pred EEEEeccCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC-cEEEeeccCCCcc
Q 002051 718 CLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLT 794 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g-~vkL~DFG~a~~~ 794 (975)
|+|||||+ ++|.+++.. .....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+|+.+
T Consensus 143 ~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~ 221 (440)
T PTZ00036 143 NVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNL 221 (440)
T ss_pred EEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchhc
Confidence 89999995 588877753 2345799999999999999999999999999999999999999665 6999999999654
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCC
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRG 873 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~ 873 (975)
... ......+||+.|+|||++.+. .|+.++|||||||++|+|++|.+||.+
T Consensus 222 ~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~ 273 (440)
T PTZ00036 222 LAG----------------------------QRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSG 273 (440)
T ss_pred cCC----------------------------CCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 311 111235789999999998764 689999999999999999999999999
Q ss_pred CCHHHHHHHHHhcC-----------------CCCCC----------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 874 KTRQKTFANILHKD-----------------LKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 874 ~~~~~~~~~i~~~~-----------------~~~p~----------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
.+..+.+..++... ..+|. +...+.++++||.+||++||.+||| +.|+|
T Consensus 274 ~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~t----a~e~l 349 (440)
T PTZ00036 274 QSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLN----PIEAL 349 (440)
T ss_pred CChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcC----HHHHh
Confidence 88777666654311 11111 1235678999999999999999999 99999
Q ss_pred cCCCccCCCcc
Q 002051 927 KHPFFKGVNWA 937 (975)
Q Consensus 927 ~Hp~f~~~~~~ 937 (975)
.||||..+...
T Consensus 350 ~hp~f~~~~~~ 360 (440)
T PTZ00036 350 ADPFFDDLRDP 360 (440)
T ss_pred CChhHHhhhcc
Confidence 99999876553
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=335.09 Aligned_cols=237 Identities=24% Similarity=0.374 Sum_probs=192.4
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-------------------------hccccccCCeEEEE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------------------MLNRNKTKTHVCLI 720 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------------------~~~~~~~~~~~~lV 720 (975)
+..++|++++.||+|+||.||+|++..++..||+|++.... +.........+|+|
T Consensus 2 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (331)
T cd06649 2 LKDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (331)
T ss_pred CCcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 45679999999999999999999999999999999886431 01111256789999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~-gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
|||++|++|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++.....
T Consensus 82 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~--- 156 (331)
T cd06649 82 MEHMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--- 156 (331)
T ss_pred eecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccc---
Confidence 9999999999999764 4589999999999999999999986 699999999999999999999999999854321
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
.......|++.|+|||++.+..++.++|||||||++|+|++|+.||...+..+.
T Consensus 157 --------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~ 210 (331)
T cd06649 157 --------------------------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKEL 210 (331)
T ss_pred --------------------------cccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 011235789999999999999999999999999999999999999977655443
Q ss_pred HHHHH----------------------------------------------hcCCCCCCCCCCcHHHHHHHHHhcccCcc
Q 002051 880 FANIL----------------------------------------------HKDLKFPSSTPTSLHAKQLMYRLLHRDPK 913 (975)
Q Consensus 880 ~~~i~----------------------------------------------~~~~~~p~~~~~s~~~~~li~~~L~~dP~ 913 (975)
...+. ....+.......+.++++||.+||++||+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~ 290 (331)
T cd06649 211 EAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPA 290 (331)
T ss_pred HHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcc
Confidence 22111 11111111123678899999999999999
Q ss_pred ccCCChhhHHHHHcCCCccCCCcc
Q 002051 914 SRLGSHEGANEIKKHPFFKGVNWA 937 (975)
Q Consensus 914 ~R~t~~~~~~elL~Hp~f~~~~~~ 937 (975)
+||| +++|++||||+.....
T Consensus 291 ~Rpt----~~ell~h~~~~~~~~~ 310 (331)
T cd06649 291 ERAD----LKMLMNHTFIKRSEVE 310 (331)
T ss_pred cCCC----HHHHhcChHHhhcccc
Confidence 9999 9999999999865543
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-36 Score=336.99 Aligned_cols=237 Identities=25% Similarity=0.414 Sum_probs=186.3
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------hcccc-----------------ccCCeEE
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------MLNRN-----------------KTKTHVC 718 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------~~~~~-----------------~~~~~~~ 718 (975)
+|++.++||+|+||.||+|.+..+++.||||.+.... ++... ....++|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 5899999999999999999999999999999876321 00000 0123589
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
+||||| +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 81 lv~e~~-~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 157 (338)
T cd07859 81 VVFELM-ESDLHQVIKAN--DDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 157 (338)
T ss_pred EEEecC-CCCHHHHHHhc--ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCcccccccccc
Confidence 999999 67999998764 469999999999999999999999999999999999999999999999999986432110
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC--CCCCChhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 876 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~ 876 (975)
. ........+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+.
T Consensus 158 ~------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~ 213 (338)
T cd07859 158 P------------------------TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV 213 (338)
T ss_pred C------------------------ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCCh
Confidence 0 0011124579999999999876 5788999999999999999999999987665
Q ss_pred HHHHHHHHh--------------------------cCCCCC---CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 877 QKTFANILH--------------------------KDLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 877 ~~~~~~i~~--------------------------~~~~~p---~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
...+..+.. .....+ .....++.+.+||.+||+.||++||| ++++|+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~e~l~ 289 (338)
T cd07859 214 VHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPT----AEEALA 289 (338)
T ss_pred HHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCC----HHHHhc
Confidence 443322211 000000 11245778899999999999999999 999999
Q ss_pred CCCccCCCcc
Q 002051 928 HPFFKGVNWA 937 (975)
Q Consensus 928 Hp~f~~~~~~ 937 (975)
||||+++...
T Consensus 290 hp~f~~~~~~ 299 (338)
T cd07859 290 DPYFKGLAKV 299 (338)
T ss_pred CchhhhcCcc
Confidence 9999987664
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-37 Score=326.60 Aligned_cols=232 Identities=25% Similarity=0.427 Sum_probs=192.1
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-----------------------------hccccccCCeEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-----------------------------MLNRNKTKTHVC 718 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-----------------------------~~~~~~~~~~~~ 718 (975)
.++|.+++.||+|.||.|..|.+..++..||||+++.-. +.+.+...+|+|
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiC 167 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHIC 167 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceE
Confidence 689999999999999999999999999999999876321 223344688999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC------------------
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN------------------ 780 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~------------------ 780 (975)
||+|.+ |.+++++|..+...+++...++.|++||+++++|||+++++|.||||+|||+.+.
T Consensus 168 ivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ 246 (415)
T KOG0671|consen 168 IVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPL 246 (415)
T ss_pred EEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccC
Confidence 999999 8899999999888899999999999999999999999999999999999999432
Q ss_pred --CcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHH
Q 002051 781 --GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALG 858 (975)
Q Consensus 781 --g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG 858 (975)
..|+++|||.|.... ....+.+.|..|+|||++++.+++.+|||||+|
T Consensus 247 ks~~I~vIDFGsAtf~~------------------------------e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiG 296 (415)
T KOG0671|consen 247 KSTAIKVIDFGSATFDH------------------------------EHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIG 296 (415)
T ss_pred CCcceEEEecCCcceec------------------------------cCcceeeeccccCCchheeccCcCCccCceeee
Confidence 248999999885432 122456889999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCHHH---HHHHHHh------------------cCCCCCCC-----------------------C
Q 002051 859 ILLYEMLYGYTPFRGKTRQK---TFANILH------------------KDLKFPSS-----------------------T 894 (975)
Q Consensus 859 ~il~ell~G~~Pf~~~~~~~---~~~~i~~------------------~~~~~p~~-----------------------~ 894 (975)
|||+||++|...|.+.+..+ +++.|+. +.+.+|+. .
T Consensus 297 CIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d 376 (415)
T KOG0671|consen 297 CILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDD 376 (415)
T ss_pred eEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCc
Confidence 99999999999998876555 4444432 11122211 0
Q ss_pred CCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 895 PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 895 ~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
..-..+.|||++||.+||.+|+| +.|+|.||||+.+
T Consensus 377 ~e~~~LfDLl~~mL~fDP~~RiT----l~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 377 LEHVQLFDLLRRMLEFDPARRIT----LREALSHPFFARL 412 (415)
T ss_pred HHHhHHHHHHHHHHccCcccccc----HHHHhcCHHhhcC
Confidence 01124789999999999999999 9999999999865
|
|
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=327.01 Aligned_cols=243 Identities=35% Similarity=0.631 Sum_probs=195.8
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc---------------------------cccccCCeEEEEEe
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML---------------------------NRNKTKTHVCLITD 722 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~---------------------------~~~~~~~~~~lV~E 722 (975)
.|++.+.||+|+||.||+|.+..+++.||+|.+.+.... .......++|+|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 478889999999999999999999999999987643110 11125678999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
|++|++|.+++.......+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~----- 155 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG----- 155 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCC-----
Confidence 999999999987655556999999999999999999999999999999999999999999999999988543210
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHH---HH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ---KT 879 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~---~~ 879 (975)
.......|++.|+|||++.+..++.++||||+||++|+|++|..||...... ..
T Consensus 156 -----------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~ 212 (285)
T cd05630 156 -----------------------QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE 212 (285)
T ss_pred -----------------------ccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHH
Confidence 0112346899999999999989999999999999999999999999865432 22
Q ss_pred HHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhc
Q 002051 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC 941 (975)
Q Consensus 880 ~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~ 941 (975)
...+... ........++..+.+||.+||+.||.+|||+. ..++|+++||||+.++|.++..
T Consensus 213 ~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~~~~~~~ 274 (285)
T cd05630 213 VERLVKE-VQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINFKRLEA 274 (285)
T ss_pred HHhhhhh-hhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhccCHHHHhc
Confidence 2222221 11112234688999999999999999999843 1378999999999999997755
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=326.14 Aligned_cols=229 Identities=28% Similarity=0.488 Sum_probs=187.3
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------cc------cc--------------ccCC
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------LN------RN--------------KTKT 715 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------~~------~~--------------~~~~ 715 (975)
+|++++.||+|+||+||+|.++.+++.||+|.++.... .. .. ....
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 58999999999999999999999999999998764210 00 00 0134
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
.+++||||+. ++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~ 159 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYS 159 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCcccccc
Confidence 5899999995 599999877555569999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
.. .......||+.|+|||++.+..++.++|||||||++|+|++|.+||.+..
T Consensus 160 ~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~ 211 (288)
T cd07863 160 CQ----------------------------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS 211 (288)
T ss_pred Cc----------------------------ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCC
Confidence 11 01123468999999999999899999999999999999999999998887
Q ss_pred HHHHHHHHHhcC-----CCCC--------------------CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCC
Q 002051 876 RQKTFANILHKD-----LKFP--------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930 (975)
Q Consensus 876 ~~~~~~~i~~~~-----~~~p--------------------~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~ 930 (975)
....+.++.... ..++ ....++..+.+||.+||++||.+||| +.+++.|||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~~~l~hp~ 287 (288)
T cd07863 212 EADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRIS----AFRALQHPF 287 (288)
T ss_pred HHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCC----HHHHhcCCC
Confidence 776666554310 0000 01235678899999999999999999 999999999
Q ss_pred c
Q 002051 931 F 931 (975)
Q Consensus 931 f 931 (975)
|
T Consensus 288 f 288 (288)
T cd07863 288 F 288 (288)
T ss_pred C
Confidence 8
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=324.96 Aligned_cols=244 Identities=35% Similarity=0.615 Sum_probs=198.9
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc---------------------------cccccCCeEEEEEe
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML---------------------------NRNKTKTHVCLITD 722 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~---------------------------~~~~~~~~~~lV~E 722 (975)
.|++.+.||.|+||+||++.+..+++.||+|.+.+.... ......+.+|+|||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 377889999999999999999999999999998643210 11125678999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
|+++++|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~----- 155 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG----- 155 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC-----
Confidence 999999998887654457999999999999999999999999999999999999999999999999988543211
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 882 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~ 882 (975)
.......|++.|+|||++.+..++.++|+|||||++|+|++|..||.+.........
T Consensus 156 -----------------------~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~ 212 (285)
T cd05632 156 -----------------------ESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREE 212 (285)
T ss_pred -----------------------CcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 011234689999999999988899999999999999999999999987765544333
Q ss_pred HHhcCC--CCCCCCCCcHHHHHHHHHhcccCccccCCChh-hHHHHHcCCCccCCCcchhhc
Q 002051 883 ILHKDL--KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVRC 941 (975)
Q Consensus 883 i~~~~~--~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~-~~~elL~Hp~f~~~~~~~~~~ 941 (975)
+..... .......++..+.+|+.+||+.||.+||++.+ .+.+++.|+||+.++|.++..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~ 274 (285)
T cd05632 213 VDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFKRLEA 274 (285)
T ss_pred HHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCHHHHhc
Confidence 332111 11222446788999999999999999999764 389999999999999987643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=350.56 Aligned_cols=239 Identities=28% Similarity=0.436 Sum_probs=199.3
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc--------------cc------------cc-------
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--------------NR------------NK------- 712 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~--------------~~------------~~------- 712 (975)
...++|.+.+.||+|+||+||+|++..+|+.||||++...... .. ..
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 3457999999999999999999999999999999998643210 00 00
Q ss_pred -cCCeEEEEEeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeecc
Q 002051 713 -TKTHVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 789 (975)
Q Consensus 713 -~~~~~~lV~Ey~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG 789 (975)
....+++||||+++|+|.+++... ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFG 188 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFG 188 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecc
Confidence 111478999999999999998653 23568999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCC
Q 002051 790 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYT 869 (975)
Q Consensus 790 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~ 869 (975)
+++.+..... .......+||+.|+|||++.+..++.++|||||||++|+|++|+.
T Consensus 189 ls~~~~~~~~-------------------------~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~ 243 (496)
T PTZ00283 189 FSKMYAATVS-------------------------DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKR 243 (496)
T ss_pred cCeecccccc-------------------------ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence 9865431100 011234679999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 870 PFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 870 Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
||.+.+..+.+..+..+... +.+..+++.+.+||.+||+.||.+||+ +.+++.|||++..
T Consensus 244 Pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~L~~dP~~RPs----~~ell~~p~~~~~ 303 (496)
T PTZ00283 244 PFDGENMEEVMHKTLAGRYD-PLPPSISPEMQEIVTALLSSDPKRRPS----SSKLLNMPICKLF 303 (496)
T ss_pred CCCCCCHHHHHHHHhcCCCC-CCCCCCCHHHHHHHHHHcccChhhCcC----HHHHHhCHHHHHh
Confidence 99998888888777765443 334457899999999999999999999 9999999998764
|
|
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=340.24 Aligned_cols=236 Identities=23% Similarity=0.343 Sum_probs=186.5
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------hccccccCCeEEEEEeccCCC
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------MLNRNKTKTHVCLITDYCPGG 727 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------~~~~~~~~~~~~lV~Ey~~gg 727 (975)
+...+|++++.||+|+||.||+|.+..+++.||+|...... +........+.|+|||++ ++
T Consensus 89 ~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~-~~ 167 (391)
T PHA03212 89 IEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQRGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY-KT 167 (391)
T ss_pred cccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhhhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC-CC
Confidence 55678999999999999999999999999999999865432 112223567889999999 57
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchh
Q 002051 728 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 807 (975)
Q Consensus 728 sL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 807 (975)
+|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.....
T Consensus 168 ~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~---------- 235 (391)
T PHA03212 168 DLYCYLAAK--RNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDI---------- 235 (391)
T ss_pred CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccc----------
Confidence 999988764 45899999999999999999999999999999999999999999999999998542210
Q ss_pred hhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC-------HHHHH
Q 002051 808 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT-------RQKTF 880 (975)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~-------~~~~~ 880 (975)
........+||+.|+|||++.+..++.++|||||||++|+|++|..||.... ....+
T Consensus 236 ----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l 299 (391)
T PHA03212 236 ----------------NANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQI 299 (391)
T ss_pred ----------------cccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHH
Confidence 0011234579999999999999999999999999999999999998875421 11122
Q ss_pred HHHHhc--------------------------CCCCCC-------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 881 ANILHK--------------------------DLKFPS-------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 881 ~~i~~~--------------------------~~~~p~-------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
..++.. ....+. ...++.++.+||.+||++||.+||| ++|+|+
T Consensus 300 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpt----a~elL~ 375 (391)
T PHA03212 300 KLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPS----AEALLD 375 (391)
T ss_pred HHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCC----HHHHhc
Confidence 222111 000010 0124567899999999999999999 999999
Q ss_pred CCCccCC
Q 002051 928 HPFFKGV 934 (975)
Q Consensus 928 Hp~f~~~ 934 (975)
||||..+
T Consensus 376 hp~f~~~ 382 (391)
T PHA03212 376 FAAFQDI 382 (391)
T ss_pred ChhhccC
Confidence 9999875
|
|
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-35 Score=322.53 Aligned_cols=251 Identities=43% Similarity=0.762 Sum_probs=209.4
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV~ 721 (975)
++|++.+.||.|+||.||++.+..+++.||+|++.+... ........++|+||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 479999999999999999999999999999999865321 11112567889999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
||+++++|.+++... ..+++..+..++.||+.||.|||++||+|+||+|+|||++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~---- 154 (290)
T cd05580 81 EYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR---- 154 (290)
T ss_pred ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC----
Confidence 999999999999775 56999999999999999999999999999999999999999999999999998553211
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~ 881 (975)
.....|++.|+|||.+.+..++.++||||||+++|+|++|..||...+......
T Consensus 155 --------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~ 208 (290)
T cd05580 155 --------------------------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYE 208 (290)
T ss_pred --------------------------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 123468899999999988888999999999999999999999998888777777
Q ss_pred HHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCC-hhhHHHHHcCCCccCCCcchhhccCCCCCCCCCcc
Q 002051 882 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFA 953 (975)
Q Consensus 882 ~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~-~~~~~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~ 953 (975)
.+......+|. ..+..+.++|.+||..||.+|++. ...+++++.||||..++|..+....-+....|...
T Consensus 209 ~~~~~~~~~~~--~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (290)
T cd05580 209 KILEGKVRFPS--FFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWIALLQRKIEAPFIPKVK 279 (290)
T ss_pred HHhcCCccCCc--cCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCCHHHHhhccCCCCccCCCC
Confidence 77766655544 458899999999999999999932 13499999999999999987765444433445443
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-35 Score=334.10 Aligned_cols=235 Identities=28% Similarity=0.435 Sum_probs=187.7
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------------------hccccccCC-----eEE
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------------------MLNRNKTKT-----HVC 718 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------------~~~~~~~~~-----~~~ 718 (975)
+|++++.||+|+||.||+|.+..+++.||||.+.... +........ ++|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4889999999999999999999999999999875421 000111222 789
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
+||||+ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 81 lv~e~~-~~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~ 157 (372)
T cd07853 81 VVTELM-QSDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE 157 (372)
T ss_pred EEeecc-ccCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCc
Confidence 999999 56898888653 569999999999999999999999999999999999999999999999999986532110
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
........+++.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..
T Consensus 158 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~ 211 (372)
T cd07853 158 --------------------------SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPI 211 (372)
T ss_pred --------------------------cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHH
Confidence 0111234678999999999874 4788999999999999999999999988776
Q ss_pred HHHHHHHhc-----------------------CCCCC-------CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 878 KTFANILHK-----------------------DLKFP-------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 878 ~~~~~i~~~-----------------------~~~~p-------~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
..+..+... ....+ .....+.++.+||.+||++||.+||| +.|+|.
T Consensus 212 ~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t----~~e~l~ 287 (372)
T cd07853 212 QQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRIS----AADALA 287 (372)
T ss_pred HHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcC----HHHHhc
Confidence 655544321 11111 11235788999999999999999999 999999
Q ss_pred CCCccCCCcc
Q 002051 928 HPFFKGVNWA 937 (975)
Q Consensus 928 Hp~f~~~~~~ 937 (975)
||||.+..+.
T Consensus 288 hp~~~~~~~~ 297 (372)
T cd07853 288 HPYLDEGRLR 297 (372)
T ss_pred CHhhCCCcch
Confidence 9999986543
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-36 Score=329.01 Aligned_cols=236 Identities=26% Similarity=0.452 Sum_probs=184.1
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccc---------------------------hhccccccCCeE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKG---------------------------VMLNRNKTKTHV 717 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~---------------------------~~~~~~~~~~~~ 717 (975)
.++...|+++++||.||.+.||++..... +.||+|.+... .+++....++++
T Consensus 357 ~Vkg~~Yeilk~iG~GGSSkV~kV~~s~~-~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~l 435 (677)
T KOG0596|consen 357 KVKGREYEILKQIGSGGSSKVFKVLNSDK-QIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYL 435 (677)
T ss_pred EECcchhhHHHhhcCCCcceeeeeecCCC-cchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceE
Confidence 45677899999999999999999998544 45555543211 134444578999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
||||||- ..+|..+|.+.. ..++...++.+.+|||.|+.++|.+||||.||||.|+|+. .|.+||+|||+|..+...
T Consensus 436 YmvmE~G-d~DL~kiL~k~~-~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~D 512 (677)
T KOG0596|consen 436 YMVMECG-DIDLNKILKKKK-SIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPD 512 (677)
T ss_pred EEEeecc-cccHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCcc
Confidence 9999998 779999998753 3455568999999999999999999999999999999998 679999999999765432
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC-----------CCChhHHHHHHHHHHHHHh
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-----------HTSAVDWWALGILLYEMLY 866 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-----------~~~k~DIWSLG~il~ell~ 866 (975)
.. .-...+.+||+.||+||.+.... .+.++||||||||||+|++
T Consensus 513 TT-------------------------sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvY 567 (677)
T KOG0596|consen 513 TT-------------------------SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVY 567 (677)
T ss_pred cc-------------------------ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHh
Confidence 21 12234679999999999996543 3568999999999999999
Q ss_pred CCCCCCCCC-HHHHHHHHHhc--CCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 867 GYTPFRGKT-RQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 867 G~~Pf~~~~-~~~~~~~i~~~--~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
|++||..-. ...-+..|..- .+.||.... ..++.++++.||.+||.+||| +.+||+|||+...
T Consensus 568 gktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~-~~~li~~mK~CL~rdPkkR~s----i~eLLqhpFl~~~ 633 (677)
T KOG0596|consen 568 GKTPFGQIINQIAKLHAITDPNHEIEFPDIPE-NDELIDVMKCCLARDPKKRWS----IPELLQHPFLQIQ 633 (677)
T ss_pred cCCchHHHHHHHHHHHhhcCCCccccccCCCC-chHHHHHHHHHHhcCcccCCC----cHHHhcCcccccc
Confidence 999996532 33334444443 235554432 234999999999999999999 9999999999864
|
|
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=316.81 Aligned_cols=236 Identities=26% Similarity=0.409 Sum_probs=199.6
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccch----------------------hccccccCCeEEEEEeccCCC
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV----------------------MLNRNKTKTHVCLITDYCPGG 727 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~----------------------~~~~~~~~~~~~lV~Ey~~gg 727 (975)
-|.++.+||+|+||.||+|.|+.+|+.+|||.+.... ++..+..+..++||||||..|
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAG 113 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAG 113 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCC
Confidence 4889999999999999999999999999999764321 223333667889999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchh
Q 002051 728 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 807 (975)
Q Consensus 728 sL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 807 (975)
++.+++..+ .+++++.++..+++.-++||+|||...-||||||..|||++.+|..||+|||+|-.+.
T Consensus 114 SiSDI~R~R-~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLT------------ 180 (502)
T KOG0574|consen 114 SISDIMRAR-RKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLT------------ 180 (502)
T ss_pred cHHHHHHHh-cCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhh------------
Confidence 999999764 5789999999999999999999999999999999999999999999999999995543
Q ss_pred hhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-c
Q 002051 808 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH-K 886 (975)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~-~ 886 (975)
..+...++..|||.|||||++..-.|+.++||||||++..||.-|++||...++...+..|-. .
T Consensus 181 ---------------DTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~P 245 (502)
T KOG0574|consen 181 ---------------DTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKP 245 (502)
T ss_pred ---------------hhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCC
Confidence 223455678999999999999999999999999999999999999999988776544433322 1
Q ss_pred CCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcc
Q 002051 887 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 937 (975)
Q Consensus 887 ~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~ 937 (975)
...|..+..+|.++.||+++||.++|++|.| +-+|++|||+++-+-.
T Consensus 246 PPTF~KPE~WS~~F~DFi~~CLiK~PE~R~T----A~~L~~H~FiknA~g~ 292 (502)
T KOG0574|consen 246 PPTFKKPEEWSSEFNDFIRSCLIKKPEERKT----ALRLCEHTFIKNAPGC 292 (502)
T ss_pred CCCCCChHhhhhHHHHHHHHHhcCCHHHHHH----HHHHhhhhhhcCCCcc
Confidence 2233344557889999999999999999999 9999999999876543
|
|
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-35 Score=333.07 Aligned_cols=229 Identities=25% Similarity=0.457 Sum_probs=185.3
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------cccc------ccCC
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRN------KTKT 715 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~------~~~~ 715 (975)
.++|++++.||+|+||.||+|.+..+++.||||++.+... .... ....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 5789999999999999999999999999999999864210 0000 1224
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
++|+||||+ +++|.+++.. .++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 103 ~~~lv~e~~-~~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 177 (364)
T cd07875 103 DVYIVMELM-DANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177 (364)
T ss_pred eEEEEEeCC-CCCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccC
Confidence 679999999 4588887753 37889999999999999999999999999999999999999999999999986532
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
.. .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+
T Consensus 178 ~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 229 (364)
T cd07875 178 TS----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229 (364)
T ss_pred CC----------------------------CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Confidence 11 01123578999999999999999999999999999999999999999887
Q ss_pred HHHHHHHHHhcCCC------------------------------------CCC----CCCCcHHHHHHHHHhcccCcccc
Q 002051 876 RQKTFANILHKDLK------------------------------------FPS----STPTSLHAKQLMYRLLHRDPKSR 915 (975)
Q Consensus 876 ~~~~~~~i~~~~~~------------------------------------~p~----~~~~s~~~~~li~~~L~~dP~~R 915 (975)
..+.+..++..... ++. ....+..+++||.+||++||.+|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R 309 (364)
T cd07875 230 HIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309 (364)
T ss_pred HHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccC
Confidence 76666555431100 000 01124578999999999999999
Q ss_pred CCChhhHHHHHcCCCccC
Q 002051 916 LGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 916 ~t~~~~~~elL~Hp~f~~ 933 (975)
|| +.++|+||||..
T Consensus 310 ~t----~~e~L~hp~~~~ 323 (364)
T cd07875 310 IS----VDEALQHPYINV 323 (364)
T ss_pred CC----HHHHhcCccccc
Confidence 99 999999999974
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-35 Score=328.62 Aligned_cols=234 Identities=25% Similarity=0.386 Sum_probs=189.3
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-------------------------hccccccCCeEEEE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------------------MLNRNKTKTHVCLI 720 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------------------~~~~~~~~~~~~lV 720 (975)
+..++|++.++||.|+||.||++.+..++..+|+|++.... +.......+++|+|
T Consensus 2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (333)
T cd06650 2 LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (333)
T ss_pred cchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEE
Confidence 45678999999999999999999999999999999876431 11112256789999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~-gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
|||++|++|.+++... +.+++..+..++.||+.||.|||++ +|+|+||||+|||++.++.+||+|||++.....
T Consensus 82 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~--- 156 (333)
T cd06650 82 MEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--- 156 (333)
T ss_pred EecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhh---
Confidence 9999999999999764 4689999999999999999999985 799999999999999999999999999854321
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
.......|++.|+|||++.+..++.++|||||||++|+|++|+.||........
T Consensus 157 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~ 210 (333)
T cd06650 157 --------------------------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKEL 210 (333)
T ss_pred --------------------------hccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHH
Confidence 011235789999999999998899999999999999999999999976554332
Q ss_pred HHHH--------------------------------------------HhcCCCCCCCCCCcHHHHHHHHHhcccCcccc
Q 002051 880 FANI--------------------------------------------LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915 (975)
Q Consensus 880 ~~~i--------------------------------------------~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R 915 (975)
...+ .....+.......+.++++||.+||++||++|
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R 290 (333)
T cd06650 211 ELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAER 290 (333)
T ss_pred HHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccC
Confidence 2111 11110111112356789999999999999999
Q ss_pred CCChhhHHHHHcCCCccCC
Q 002051 916 LGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 916 ~t~~~~~~elL~Hp~f~~~ 934 (975)
|| +.||+.||||+..
T Consensus 291 pt----~~ell~h~~~~~~ 305 (333)
T cd06650 291 AD----LKQLMVHAFIKRS 305 (333)
T ss_pred cC----HHHHhhCHHHhcC
Confidence 99 9999999999864
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-35 Score=326.07 Aligned_cols=229 Identities=29% Similarity=0.449 Sum_probs=191.7
Q ss_pred cccccCCCcccccccccCCceEEEEEEEeCCCeE-EEEEEeccchh--------------------------ccccccCC
Q 002051 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQY-FAMKAMDKGVM--------------------------LNRNKTKT 715 (975)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~-vAiK~l~~~~~--------------------------~~~~~~~~ 715 (975)
.+.++.....+...||.|+||+||++.... +. ||+|++..... +.......
T Consensus 35 ~~~i~~~~l~~~~~iG~G~~g~V~~~~~~g--~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~ 112 (362)
T KOG0192|consen 35 EEEIDPDELPIEEVLGSGSFGTVYKGKWRG--TDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPP 112 (362)
T ss_pred ceecChHHhhhhhhcccCCceeEEEEEeCC--ceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 345666777888889999999999999954 44 99999876431 11111333
Q ss_pred -eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCCCCEEEecCC-cEEEeeccCCC
Q 002051 716 -HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG-IIYRDLKPENVLLQGNG-HVSLTDFDLSC 792 (975)
Q Consensus 716 -~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~g-IiHrDIKp~NILl~~~g-~vkL~DFG~a~ 792 (975)
.++|||||+++|+|.+++.+.....++...+..++.||+.||.|||+++ ||||||||+|||++.++ ++||+|||+++
T Consensus 113 ~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr 192 (362)
T KOG0192|consen 113 GSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSR 192 (362)
T ss_pred CceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccce
Confidence 6999999999999999998744568999999999999999999999999 99999999999999998 99999999996
Q ss_pred ccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhc--CCCCCChhHHHHHHHHHHHHHhCCCC
Q 002051 793 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA--GAGHTSAVDWWALGILLYEMLYGYTP 870 (975)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~--~~~~~~k~DIWSLG~il~ell~G~~P 870 (975)
....+. ...+...||+.|||||++. ...|+.|+||||||+++|||++|+.|
T Consensus 193 ~~~~~~---------------------------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~P 245 (362)
T KOG0192|consen 193 EKVISK---------------------------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIP 245 (362)
T ss_pred eecccc---------------------------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCC
Confidence 643211 1122367999999999999 56899999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChh
Q 002051 871 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 920 (975)
Q Consensus 871 f~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~ 920 (975)
|.+.........+.......+.+..+++.+..||.+||..||.+||++.+
T Consensus 246 f~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~e 295 (362)
T KOG0192|consen 246 FEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLE 295 (362)
T ss_pred CCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHH
Confidence 99999877778887777666666668999999999999999999999544
|
|
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=323.73 Aligned_cols=236 Identities=23% Similarity=0.426 Sum_probs=190.0
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-------------------------ccccccCCeEEEEE
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-------------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-------------------------~~~~~~~~~~~lV~ 721 (975)
.+++|.++++||+|+||.||+|+++.+++.||+|.++.... ........+.|+||
T Consensus 4 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 83 (309)
T cd07872 4 KMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVF 83 (309)
T ss_pred CCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEE
Confidence 35789999999999999999999999999999998864311 11122567899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
||++ ++|.+++... ...++...++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 84 e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--- 158 (309)
T cd07872 84 EYLD-KDLKQYMDDC-GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT--- 158 (309)
T ss_pred eCCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCc---
Confidence 9995 5898888654 3458999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~ 880 (975)
.......+++.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+
T Consensus 159 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~ 214 (309)
T cd07872 159 ------------------------KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDEL 214 (309)
T ss_pred ------------------------cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 01123467899999999865 45788999999999999999999999887766655
Q ss_pred HHHHhcC-------------------CCCCC---------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCcc
Q 002051 881 ANILHKD-------------------LKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932 (975)
Q Consensus 881 ~~i~~~~-------------------~~~p~---------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~ 932 (975)
..+.... ..++. ...++.++++||.+||++||.+||| +.|+|.||||+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t----~~e~l~h~~~~ 290 (309)
T cd07872 215 HLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRIS----AEEAMKHAYFR 290 (309)
T ss_pred HHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCC----HHHHhcChhhh
Confidence 5443210 11111 1246788999999999999999999 99999999998
Q ss_pred CCC
Q 002051 933 GVN 935 (975)
Q Consensus 933 ~~~ 935 (975)
.+.
T Consensus 291 ~~~ 293 (309)
T cd07872 291 SLG 293 (309)
T ss_pred hcc
Confidence 763
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=331.08 Aligned_cols=229 Identities=26% Similarity=0.485 Sum_probs=182.1
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------cccc------ccCC
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRN------KTKT 715 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~------~~~~ 715 (975)
.++|++++.||+|+||.||+|.+..+|+.||+|++.+... .... ....
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 5789999999999999999999999999999999864310 0000 0123
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
++|+||||+. ++|...+.. .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 100 ~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~ 174 (359)
T cd07876 100 DVYLVMELMD-ANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC 174 (359)
T ss_pred eeEEEEeCCC-cCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccc
Confidence 5799999995 577776643 38899999999999999999999999999999999999999999999999985432
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
.. .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+
T Consensus 175 ~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~ 226 (359)
T cd07876 175 TN----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTD 226 (359)
T ss_pred cC----------------------------ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence 11 01123478999999999999999999999999999999999999998876
Q ss_pred HHHHHHHHHhc----------------------CCCCC--------------C----CCCCcHHHHHHHHHhcccCcccc
Q 002051 876 RQKTFANILHK----------------------DLKFP--------------S----STPTSLHAKQLMYRLLHRDPKSR 915 (975)
Q Consensus 876 ~~~~~~~i~~~----------------------~~~~p--------------~----~~~~s~~~~~li~~~L~~dP~~R 915 (975)
....+..+... ....+ . ....+..+++||.+||++||++|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R 306 (359)
T cd07876 227 HIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKR 306 (359)
T ss_pred HHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccC
Confidence 54443332211 10000 0 01235678999999999999999
Q ss_pred CCChhhHHHHHcCCCccC
Q 002051 916 LGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 916 ~t~~~~~~elL~Hp~f~~ 933 (975)
|| +.|+|.||||..
T Consensus 307 ~t----~~e~l~hp~~~~ 320 (359)
T cd07876 307 IS----VDEALRHPYITV 320 (359)
T ss_pred CC----HHHHhcCchhhh
Confidence 99 999999999974
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-36 Score=329.98 Aligned_cols=226 Identities=27% Similarity=0.409 Sum_probs=195.0
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccch---------------hccccc------------cCCeEEEEEe
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV---------------MLNRNK------------TKTHVCLITD 722 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~---------------~~~~~~------------~~~~~~lV~E 722 (975)
.|.-++.||.|+||-||-|++..+.+.||||.|.-.- ++.... .....+||||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 5888999999999999999999999999999986431 111111 2233469999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
|| -|+-.|++.-+ .+++.+..+..|+.+.+.||.|||+.+.||||||..|||++..|.|||+|||.|...
T Consensus 107 YC-lGSAsDlleVh-kKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~-------- 176 (948)
T KOG0577|consen 107 YC-LGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIM-------- 176 (948)
T ss_pred HH-hccHHHHHHHH-hccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhc--------
Confidence 99 66888888754 467999999999999999999999999999999999999999999999999988442
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC---CCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~---~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
.+.++|+|||+|||||+++. +.|+-++||||||+++.+|.-.++|+.+.+....
T Consensus 177 -----------------------~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSA 233 (948)
T KOG0577|consen 177 -----------------------APANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA 233 (948)
T ss_pred -----------------------CchhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHH
Confidence 35578999999999999864 5689999999999999999999999999999998
Q ss_pred HHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCcc
Q 002051 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932 (975)
Q Consensus 880 ~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~ 932 (975)
++-|.....+-.....+|..++.|+..||++-|.+||| .+++|.|+|..
T Consensus 234 LYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRpt----se~ll~H~fv~ 282 (948)
T KOG0577|consen 234 LYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPT----SEELLKHRFVL 282 (948)
T ss_pred HHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCc----HHHHhhcchhc
Confidence 88888766554445568999999999999999999999 99999999985
|
|
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-35 Score=329.33 Aligned_cols=230 Identities=27% Similarity=0.441 Sum_probs=186.4
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------cc------------cc------ccCC
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------LN------------RN------KTKT 715 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------~~------------~~------~~~~ 715 (975)
.++|++++.||.|+||+||+|.+..+++.||||++.+... +. .. ....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN 93 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence 4689999999999999999999999999999999864310 00 00 1124
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
.+|++|+++ +++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 94 ~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~ 169 (343)
T cd07878 94 EVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQAD 169 (343)
T ss_pred cEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecC
Confidence 579999999 8899988864 469999999999999999999999999999999999999999999999999986432
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 874 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~ 874 (975)
. .....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.
T Consensus 170 ~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 219 (343)
T cd07878 170 D------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGN 219 (343)
T ss_pred C------------------------------CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence 1 1123578999999999977 56889999999999999999999999887
Q ss_pred CHHHHHHHHHhcCC-----------------------CCCC------CCCCcHHHHHHHHHhcccCccccCCChhhHHHH
Q 002051 875 TRQKTFANILHKDL-----------------------KFPS------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 925 (975)
Q Consensus 875 ~~~~~~~~i~~~~~-----------------------~~p~------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~el 925 (975)
+....+..+..... ..+. ....++.+.+||.+||++||.+||| +.|+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s----~~el 295 (343)
T cd07878 220 DYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRIS----ASEA 295 (343)
T ss_pred CHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCC----HHHH
Confidence 76655554432110 0000 1234667899999999999999999 9999
Q ss_pred HcCCCccCCC
Q 002051 926 KKHPFFKGVN 935 (975)
Q Consensus 926 L~Hp~f~~~~ 935 (975)
|.||||....
T Consensus 296 l~hp~~~~~~ 305 (343)
T cd07878 296 LAHPYFSQYH 305 (343)
T ss_pred hcCcchhccC
Confidence 9999998653
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=303.93 Aligned_cols=237 Identities=31% Similarity=0.518 Sum_probs=199.5
Q ss_pred cccccCCceEEEEEEEeCCCeEEEEEEeccch-------------------------hccccccCCeEEEEEeccCCCCH
Q 002051 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------------------MLNRNKTKTHVCLITDYCPGGEL 729 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------------------~~~~~~~~~~~~lV~Ey~~ggsL 729 (975)
..||+|+|+.|--|....+|+.||||++.|.. +++.++++..+|||||-|.||.|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl 163 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL 163 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence 57999999999999999999999999998752 45566689999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc---EEEeeccCCCccCCCCCCCCCcch
Q 002051 730 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH---VSLTDFDLSCLTSCKPQLLLPTTN 806 (975)
Q Consensus 730 ~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~---vkL~DFG~a~~~~~~~~~~~~~~~ 806 (975)
...|.++ ..|++.++..+++.|+.||.|||.+||.||||||+|||....+. ||||||.+......+....
T Consensus 164 LshI~~~--~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~s----- 236 (463)
T KOG0607|consen 164 LSHIQKR--KHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCS----- 236 (463)
T ss_pred HHHHHHh--hhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCC-----
Confidence 9999885 66999999999999999999999999999999999999986654 8999999875433221111
Q ss_pred hhhhccCCCCCcccccccccccccccCCCCccchhhhc-----CCCCCChhHHHHHHHHHHHHHhCCCCCCCC-------
Q 002051 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGK------- 874 (975)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~~~k~DIWSLG~il~ell~G~~Pf~~~------- 874 (975)
........+.+|+..|||||++. ...|+.++|.||||++||.|+.|++||.|.
T Consensus 237 ---------------pastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGW 301 (463)
T KOG0607|consen 237 ---------------PASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGW 301 (463)
T ss_pred ---------------CCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCc
Confidence 11122345679999999999872 346889999999999999999999999763
Q ss_pred --------CHHHHHHHHHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcc
Q 002051 875 --------TRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 937 (975)
Q Consensus 875 --------~~~~~~~~i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~ 937 (975)
-...+++.|..+.+.||.. ..+|.+.+++|+.+|..|+.+|.+ +.++++|||+..+.-.
T Consensus 302 drGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rls----a~~vlnhPw~~~~~~e 370 (463)
T KOG0607|consen 302 DRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLS----AAQVLNHPWVQRCAPE 370 (463)
T ss_pred cCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhh----hhhccCCccccccchh
Confidence 1345778888999999976 458999999999999999999999 9999999999876433
|
|
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=316.15 Aligned_cols=233 Identities=36% Similarity=0.672 Sum_probs=185.2
Q ss_pred ccccCCceEEEEEEEeCCCeEEEEEEeccchhc------------------------------cccccCCeEEEEEeccC
Q 002051 676 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML------------------------------NRNKTKTHVCLITDYCP 725 (975)
Q Consensus 676 ~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~------------------------------~~~~~~~~~~lV~Ey~~ 725 (975)
.||+|+||.||++.+..+++.||+|.+.+.... ......+.+|+||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999999999999999988643210 01114567899999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcc
Q 002051 726 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 805 (975)
Q Consensus 726 ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 805 (975)
|++|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++......
T Consensus 81 ~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~-------- 150 (279)
T cd05633 81 GGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-------- 150 (279)
T ss_pred CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc--------
Confidence 99999998764 56999999999999999999999999999999999999999999999999998543210
Q ss_pred hhhhhccCCCCCcccccccccccccccCCCCccchhhhc-CCCCCChhHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHH
Q 002051 806 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEMLYGYTPFRGKTR--QKTFAN 882 (975)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~--~~~~~~ 882 (975)
......|++.|+|||.+. +..++.++||||+||++|+|++|..||..... ......
T Consensus 151 ---------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~ 209 (279)
T cd05633 151 ---------------------KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR 209 (279)
T ss_pred ---------------------CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHH
Confidence 011246899999999986 45688999999999999999999999975322 111221
Q ss_pred HHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhh
Q 002051 883 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVR 940 (975)
Q Consensus 883 i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~ 940 (975)
.. .......+..++..+.++|++||+.||.+|+++. .+++++++||||++++|....
T Consensus 210 ~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~~~~~ 267 (279)
T cd05633 210 MT-LTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQQVY 267 (279)
T ss_pred Hh-hcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCCHhHHh
Confidence 11 1112222345788999999999999999999422 239999999999999998763
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=329.30 Aligned_cols=231 Identities=26% Similarity=0.460 Sum_probs=183.9
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------cccc------ccC
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRN------KTK 714 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~------~~~ 714 (975)
..++|++++.||+|+||.||+|.+..+++.||||.+..... .... ...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 35789999999999999999999999999999998864310 0000 022
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCcc
Q 002051 715 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 794 (975)
Q Consensus 715 ~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~ 794 (975)
..+|+||||+. ++|.+.+.. .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 95 ~~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~ 169 (355)
T cd07874 95 QDVYLVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 169 (355)
T ss_pred ceeEEEhhhhc-ccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccC
Confidence 45799999995 577777753 3889999999999999999999999999999999999999999999999998653
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCC
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 874 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~ 874 (975)
... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.
T Consensus 170 ~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 221 (355)
T cd07874 170 GTS----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221 (355)
T ss_pred CCc----------------------------cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 211 0112357899999999999999999999999999999999999999887
Q ss_pred CHHHHHHHHHhcC---------------------------CCCC-------------CCCCCcHHHHHHHHHhcccCccc
Q 002051 875 TRQKTFANILHKD---------------------------LKFP-------------SSTPTSLHAKQLMYRLLHRDPKS 914 (975)
Q Consensus 875 ~~~~~~~~i~~~~---------------------------~~~p-------------~~~~~s~~~~~li~~~L~~dP~~ 914 (975)
+....+..++... ..++ .....+..+++||.+||++||.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~ 301 (355)
T cd07874 222 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 301 (355)
T ss_pred CHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchh
Confidence 6555444332210 0000 00113457899999999999999
Q ss_pred cCCChhhHHHHHcCCCccCC
Q 002051 915 RLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 915 R~t~~~~~~elL~Hp~f~~~ 934 (975)
||| +.|+|+||||...
T Consensus 302 Rps----~~ell~hp~~~~~ 317 (355)
T cd07874 302 RIS----VDEALQHPYINVW 317 (355)
T ss_pred cCC----HHHHhcCcchhcc
Confidence 999 9999999999743
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-34 Score=318.28 Aligned_cols=275 Identities=37% Similarity=0.652 Sum_probs=214.4
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV~ 721 (975)
++|++++.||+|+||.||++.+..+++.||+|.+.+... ........++|+||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 369999999999999999999999999999998865421 11112567889999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
||++|++|.+++... +.+++..+..++.|++.||.|||++|++||||||+|||++.++.+||+|||+++.........
T Consensus 81 e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~ 158 (305)
T cd05609 81 EYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTN 158 (305)
T ss_pred ecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccc
Confidence 999999999999764 568999999999999999999999999999999999999999999999999986422111100
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~ 881 (975)
....... ............|+..|+|||.+.+..++.++|+|||||++|+|++|..||.+....+.+.
T Consensus 159 ~~~~~~~------------~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~ 226 (305)
T cd05609 159 LYEGHIE------------KDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFG 226 (305)
T ss_pred ccccccc------------cchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 0000000 0000011123467889999999988889999999999999999999999999888888888
Q ss_pred HHHhcCCCCCCCC-CCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhccCCCCCCCCCcccCccccc
Q 002051 882 NILHKDLKFPSST-PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDTEKEY 960 (975)
Q Consensus 882 ~i~~~~~~~p~~~-~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 960 (975)
.+.......|... .++..+.+||.+||+.||++||++ ..+.++|.||||.+.+|......... ..|.+....+..|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~-~~~~~ll~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 303 (305)
T cd05609 227 QVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGT-GGAFEVKQHRFFLGLDWNGLLRQKAE--FIPQLESEDDTSY 303 (305)
T ss_pred HHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCc-cCHHHHHhCccccCCCHHHHhhcCCC--CCCCCCCcccccc
Confidence 7777665555432 478899999999999999999984 23789999999999999987654333 3465555444433
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=329.33 Aligned_cols=232 Identities=25% Similarity=0.404 Sum_probs=182.9
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-------------------------hccccccCCeEEE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------------------MLNRNKTKTHVCL 719 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------------------~~~~~~~~~~~~l 719 (975)
....++|+++++||.|+||.||+|++..+++.||||++.... +........++|+
T Consensus 70 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 149 (353)
T PLN00034 70 AKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQV 149 (353)
T ss_pred CCCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEE
Confidence 345678999999999999999999999999999999985321 1112235678999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
|||||.+++|.+. ....+..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 150 v~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~-- 221 (353)
T PLN00034 150 LLEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQT-- 221 (353)
T ss_pred EEecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccc--
Confidence 9999999998643 23567888899999999999999999999999999999999999999999998654211
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-----CCCCChhHHHHHHHHHHHHHhCCCCCCCC
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFRGK 874 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~~~k~DIWSLG~il~ell~G~~Pf~~~ 874 (975)
.......+||..|+|||++.. ...+.++|||||||++|+|++|+.||...
T Consensus 222 -------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~ 276 (353)
T PLN00034 222 -------------------------MDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVG 276 (353)
T ss_pred -------------------------cccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCC
Confidence 011234579999999998743 23456899999999999999999999743
Q ss_pred CHH---HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 875 TRQ---KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 875 ~~~---~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
... .....+.. .........++.++.+||.+||..||++||| +.|+|+||||...
T Consensus 277 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt----~~ell~hp~~~~~ 334 (353)
T PLN00034 277 RQGDWASLMCAICM-SQPPEAPATASREFRHFISCCLQREPAKRWS----AMQLLQHPFILRA 334 (353)
T ss_pred CCccHHHHHHHHhc-cCCCCCCCccCHHHHHHHHHHccCChhhCcC----HHHHhcCcccccC
Confidence 322 22222221 1222233457889999999999999999999 9999999999874
|
|
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=311.96 Aligned_cols=229 Identities=43% Similarity=0.766 Sum_probs=193.7
Q ss_pred cccccCCceEEEEEEEeCCCeEEEEEEeccchh----------------------------ccccccCCeEEEEEeccCC
Q 002051 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM----------------------------LNRNKTKTHVCLITDYCPG 726 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~----------------------------~~~~~~~~~~~lV~Ey~~g 726 (975)
+.||.|+||.||+|.+..+++.||+|.+.+... ........++|+||||++|
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 579999999999999999999999999865321 0111145678999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcch
Q 002051 727 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 806 (975)
Q Consensus 727 gsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 806 (975)
++|.+++... ..+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---------- 149 (260)
T cd05611 82 GDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE---------- 149 (260)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc----------
Confidence 9999999764 5689999999999999999999999999999999999999999999999998754220
Q ss_pred hhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 002051 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 886 (975)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~ 886 (975)
.....|++.|++||.+.+..++.++||||||+++|+|++|..||...+....+..+...
T Consensus 150 ---------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 208 (260)
T cd05611 150 ---------------------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSR 208 (260)
T ss_pred ---------------------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence 12346788999999998888899999999999999999999999988887777777665
Q ss_pred CCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcc
Q 002051 887 DLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 937 (975)
Q Consensus 887 ~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~ 937 (975)
...++.. ..++..+.++|.+||+.+|++||++ ..++|+|.||||+.++|.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~-~~~~~~l~~~~~~~~~~~ 260 (260)
T cd05611 209 RINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGA-NGYQEIKSHPFFKSINWD 260 (260)
T ss_pred ccCCCCcccccCCHHHHHHHHHHccCCHHHccCC-CcHHHHHcChHhhcCCCC
Confidence 5544433 3478899999999999999999972 126899999999999983
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-34 Score=308.57 Aligned_cols=230 Identities=25% Similarity=0.453 Sum_probs=193.2
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccc-cCCeEEEEEe
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNK-TKTHVCLITD 722 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~-~~~~~~lV~E 722 (975)
+|++++.||.|+||.||++.++.+++.||+|.+..... ..... ....+|+|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 48999999999999999999999999999998854311 01111 3446899999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
|+++++|.+++.......+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~----- 155 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ----- 155 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEeccc-----
Confidence 999999999998755567899999999999999999999999999999999999999999999999998554211
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 882 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~ 882 (975)
........|++.|+|||++.+..++.++|+|||||++|+|++|..||...+.......
T Consensus 156 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~ 213 (257)
T cd08223 156 ----------------------CDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYR 213 (257)
T ss_pred ----------------------CCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Confidence 0112245689999999999999899999999999999999999999988777666666
Q ss_pred HHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 883 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 883 i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
+..+... +.....+..+.+||.+||+.||.+||| +.+++.||||
T Consensus 214 ~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~~l~~~~~ 257 (257)
T cd08223 214 IIEGKLP-PMPKDYSPELGELIATMLSKRPEKRPS----VKSILRQPYI 257 (257)
T ss_pred HHhcCCC-CCccccCHHHHHHHHHHhccCcccCCC----HHHHhcCCCC
Confidence 6655432 223457889999999999999999999 9999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=327.07 Aligned_cols=235 Identities=25% Similarity=0.374 Sum_probs=183.0
Q ss_pred ccccCCCcccccccccCCceEEEEEEEe-----CCCeEEEEEEeccchh-------------c----c----------cc
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVM-------------L----N----------RN 711 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~-----~t~~~vAiK~l~~~~~-------------~----~----------~~ 711 (975)
+.+..++|++.++||.|+||.||+|.+. .+++.||+|++..... + . ..
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (338)
T cd05102 2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACT 81 (338)
T ss_pred cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEec
Confidence 4567789999999999999999999853 3457899999864210 0 0 00
Q ss_pred ccCCeEEEEEeccCCCCHHHHHhhCC------------------------------------------------------
Q 002051 712 KTKTHVCLITDYCPGGELFLLLDRQP------------------------------------------------------ 737 (975)
Q Consensus 712 ~~~~~~~lV~Ey~~ggsL~~~l~~~~------------------------------------------------------ 737 (975)
.....+|+|||||++|+|.+++....
T Consensus 82 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (338)
T cd05102 82 KPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQ 161 (338)
T ss_pred CCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccch
Confidence 12446899999999999999987531
Q ss_pred ------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhc
Q 002051 738 ------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRR 811 (975)
Q Consensus 738 ------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~ 811 (975)
...++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~------------ 229 (338)
T cd05102 162 ETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD------------ 229 (338)
T ss_pred hccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcc------------
Confidence 12477888999999999999999999999999999999999999999999999865321110
Q ss_pred cCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCC
Q 002051 812 HKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKF 890 (975)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~~i~~~~~~~ 890 (975)
........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+......+...+......
T Consensus 230 -------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~ 296 (338)
T cd05102 230 -------------YVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRM 296 (338)
T ss_pred -------------hhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCC
Confidence 011123346788999999999999999999999999999996 999998765444444444433333
Q ss_pred CCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 891 PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 891 p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
..+...+..+.+||.+||+.||.+||| +.+|++
T Consensus 297 ~~~~~~~~~l~~li~~cl~~dp~~RPs----~~el~~ 329 (338)
T cd05102 297 RAPENATPEIYRIMLACWQGDPKERPT----FSALVE 329 (338)
T ss_pred CCCCCCCHHHHHHHHHHccCChhhCcC----HHHHHH
Confidence 334567889999999999999999999 666653
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-34 Score=313.58 Aligned_cols=237 Identities=36% Similarity=0.657 Sum_probs=189.4
Q ss_pred ccccCCceEEEEEEEeCCCeEEEEEEeccchhc------------------------------cccccCCeEEEEEeccC
Q 002051 676 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML------------------------------NRNKTKTHVCLITDYCP 725 (975)
Q Consensus 676 ~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~------------------------------~~~~~~~~~~lV~Ey~~ 725 (975)
.||+|+||.||+|.+..+++.||+|.+.+.... ........+|+||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999999999999999987643110 01124577899999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcc
Q 002051 726 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 805 (975)
Q Consensus 726 ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 805 (975)
|++|.+++... ..+++..++.++.|++.||.|||+++|+||||||+||+++.++.++|+|||++..+...
T Consensus 81 g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~-------- 150 (278)
T cd05606 81 GGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-------- 150 (278)
T ss_pred CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc--------
Confidence 99999998764 56999999999999999999999999999999999999999999999999998543210
Q ss_pred hhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCC---CHHHHHH
Q 002051 806 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK---TRQKTFA 881 (975)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~---~~~~~~~ 881 (975)
......|+..|+|||++.+ ..++.++||||+||++|+|++|+.||... .......
T Consensus 151 ---------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~ 209 (278)
T cd05606 151 ---------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR 209 (278)
T ss_pred ---------------------CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHH
Confidence 1123468999999999975 46889999999999999999999999875 2233332
Q ss_pred HHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhccCCC
Q 002051 882 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPP 945 (975)
Q Consensus 882 ~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~~~~~ 945 (975)
.+......+| ...+..+.++|.+||..+|.+|+.++ ..+.++++||||+..+|........|
T Consensus 210 ~~~~~~~~~~--~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~ 272 (278)
T cd05606 210 MTLTMAVELP--DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDWQMVFLQKYP 272 (278)
T ss_pred HhhccCCCCC--CcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCCchHhhhcccC
Confidence 3332333333 34688999999999999999999211 12999999999999999987654433
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=313.54 Aligned_cols=233 Identities=28% Similarity=0.419 Sum_probs=190.4
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-----------hcccc-------------c------cCCeE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-----------MLNRN-------------K------TKTHV 717 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-----------~~~~~-------------~------~~~~~ 717 (975)
.+.|.+.+.||.|+||.||+|.+..+++.||+|++.... ++... . ...++
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQL 84 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEE
Confidence 457999999999999999999999999999999985421 00000 0 13568
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|+||||+++++|.+++.......+++..+..++.|++.||.|||+++|+|+||||+||+++.++.++|+|||++......
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~ 164 (272)
T cd06637 85 WLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 164 (272)
T ss_pred EEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceecccc
Confidence 99999999999999998755567999999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhc-----CCCCCChhHHHHHHHHHHHHHhCCCCCC
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFR 872 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~~~k~DIWSLG~il~ell~G~~Pf~ 872 (975)
........|++.|+|||++. +..++.++|||||||++|+|++|..||.
T Consensus 165 ---------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~ 217 (272)
T cd06637 165 ---------------------------VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLC 217 (272)
T ss_pred ---------------------------cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 01123457899999999986 3457889999999999999999999998
Q ss_pred CCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 873 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 873 ~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
..........+............++..+.+||.+||..||.+||| +.+++.||||
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~il~~~~~ 272 (272)
T cd06637 218 DMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPT----TEQLMKHPFI 272 (272)
T ss_pred ccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCC----HHHHhhCCCC
Confidence 766655555444433333333457889999999999999999999 9999999998
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-34 Score=312.81 Aligned_cols=236 Identities=35% Similarity=0.610 Sum_probs=190.9
Q ss_pred cccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEEEeccCCCCH
Q 002051 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLITDYCPGGEL 729 (975)
Q Consensus 677 LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV~Ey~~ggsL 729 (975)
||.|+||+||+|.+..+|+.||+|++.+... ........++|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 7999999999999999999999998864321 1111256789999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhh
Q 002051 730 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 809 (975)
Q Consensus 730 ~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 809 (975)
.+++.......+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||.+......
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~------------ 148 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG------------ 148 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC------------
Confidence 99998765457999999999999999999999999999999999999999999999999988543210
Q ss_pred hccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC-
Q 002051 810 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDL- 888 (975)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~- 888 (975)
.......++..|+|||++.+..++.++|||||||++|+|++|+.||...........+.....
T Consensus 149 ----------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 212 (277)
T cd05577 149 ----------------KKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE 212 (277)
T ss_pred ----------------CccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc
Confidence 011234578899999999888899999999999999999999999977544222222222111
Q ss_pred -CCCCCCCCcHHHHHHHHHhcccCccccCCChh-hHHHHHcCCCccCCCcchhh
Q 002051 889 -KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVR 940 (975)
Q Consensus 889 -~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~-~~~elL~Hp~f~~~~~~~~~ 940 (975)
....+...++.+.++|.+||+.||.+||++.+ ++.+++.||||+.++|....
T Consensus 213 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~~~~~ 266 (277)
T cd05577 213 MAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRRLE 266 (277)
T ss_pred ccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCChhhhh
Confidence 12222346889999999999999999997666 69999999999999998774
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-34 Score=308.16 Aligned_cols=233 Identities=26% Similarity=0.378 Sum_probs=194.5
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------------ccccccCCeEEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------------LNRNKTKTHVCL 719 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------------~~~~~~~~~~~l 719 (975)
++|.+.+.||.|+||.||+|.+..+++.||+|.+..... .........+|+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 469999999999999999999999999999998754210 111225678999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
||||++|++|.+++... ..+++..++.++.|++.||.|||+.||+|+||||+||+++.++.++|+|||++........
T Consensus 82 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~ 159 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICS 159 (263)
T ss_pred EEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccc
Confidence 99999999999999764 4689999999999999999999999999999999999999999999999999865321100
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
.........|+..|+|||.+.+..++.++|||||||++|+|++|+.||...+....
T Consensus 160 ------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~ 215 (263)
T cd06625 160 ------------------------SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA 215 (263)
T ss_pred ------------------------ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH
Confidence 00111234678899999999998899999999999999999999999988776666
Q ss_pred HHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 880 ~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
...+.............+..+.+||.+||..+|.+||| +.+++.||||
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~ll~~~~~ 263 (263)
T cd06625 216 IFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPS----AEELLRHFFV 263 (263)
T ss_pred HHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCC----HHHHhhCCCC
Confidence 66665554444444567889999999999999999999 9999999998
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-34 Score=337.70 Aligned_cols=237 Identities=25% Similarity=0.405 Sum_probs=198.4
Q ss_pred CCCcccccccccCCceEEEEEEEeCC-CeEEEEEEeccch------------------------hccccccCCeEEEEEe
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGS-GQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITD 722 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t-~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~E 722 (975)
...|.+.+.||+|+||.||+|....+ ++.||+|.+.... +.......+++|||||
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E 145 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIME 145 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEE
Confidence 34599999999999999999999877 7889999764321 1122236788999999
Q ss_pred ccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCC
Q 002051 723 YCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 723 y~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 800 (975)
||+||+|.+++... ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.+....
T Consensus 146 ~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~-- 223 (478)
T PTZ00267 146 YGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV-- 223 (478)
T ss_pred CCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcc--
Confidence 99999999988642 23468999999999999999999999999999999999999999999999999996543110
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~ 880 (975)
........+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+
T Consensus 224 -----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~ 280 (478)
T PTZ00267 224 -----------------------SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIM 280 (478)
T ss_pred -----------------------ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 011233567999999999999999999999999999999999999999998888888
Q ss_pred HHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 881 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 881 ~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
..+..+... +.+..++..+.+||.+||..||++||+ +.+++.|+|++.+
T Consensus 281 ~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~Rps----~~~~l~~~~~~~~ 329 (478)
T PTZ00267 281 QQVLYGKYD-PFPCPVSSGMKALLDPLLSKNPALRPT----TQQLLHTEFLKYV 329 (478)
T ss_pred HHHHhCCCC-CCCccCCHHHHHHHHHHhccChhhCcC----HHHHHhCHHHHHH
Confidence 888776543 233457889999999999999999999 9999999998744
|
|
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-35 Score=296.54 Aligned_cols=237 Identities=27% Similarity=0.418 Sum_probs=185.9
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-------hccc----cccCCeEE---------------E
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------MLNR----NKTKTHVC---------------L 719 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------~~~~----~~~~~~~~---------------l 719 (975)
.+.++.+++..||.|+.|+|++++++.+|...|||.|.+.. ++.. ....+..| |
T Consensus 89 ~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~I 168 (391)
T KOG0983|consen 89 ADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFI 168 (391)
T ss_pred cChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHH
Confidence 34567788899999999999999999999999999997642 1100 01222333 3
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~-gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
.||.| +-.+..+++ ...++++|..+-++...+++||.||.++ ||||||+||+|||++..|++||||||++-.+..+
T Consensus 169 cMelM-s~C~ekLlk-rik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS- 245 (391)
T KOG0983|consen 169 CMELM-STCAEKLLK-RIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS- 245 (391)
T ss_pred HHHHH-HHHHHHHHH-HhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecc-
Confidence 34444 222333333 3456799999999999999999999975 8999999999999999999999999998654321
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC---CCCCChhHHHHHHHHHHHHHhCCCCCCC-C
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPFRG-K 874 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~---~~~~~k~DIWSLG~il~ell~G~~Pf~~-~ 874 (975)
.......|.+.|||||.+.- ..|+.++||||||++++||.||+.||.+ .
T Consensus 246 ---------------------------kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~ 298 (391)
T KOG0983|consen 246 ---------------------------KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCK 298 (391)
T ss_pred ---------------------------cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCC
Confidence 12234578999999999853 4688899999999999999999999988 4
Q ss_pred CHHHHHHHHHhcCCC-CCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCc
Q 002051 875 TRQKTFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~-~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~ 936 (975)
...+++.++++...+ +|.....|+.+++|+..||.+|+.+||. ..+||+|||+...+-
T Consensus 299 tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~----Y~~Ll~h~Fi~~ye~ 357 (391)
T KOG0983|consen 299 TDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPK----YNKLLEHPFIKRYET 357 (391)
T ss_pred ccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcc----hHHHhcCcceeecch
Confidence 567778888875443 3334558999999999999999999999 999999999985543
|
|
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-34 Score=313.69 Aligned_cols=244 Identities=25% Similarity=0.411 Sum_probs=198.4
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLIT 721 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~ 721 (975)
.+.+.|+++++||.|+||.||+|++..+++.||+|.+.... +........++|+||
T Consensus 9 ~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 88 (292)
T cd06644 9 DPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMI 88 (292)
T ss_pred CcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEE
Confidence 34567999999999999999999999999999999986432 011122567899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
||++|++|..++... ...+++..+..++.||+.||.|||++|++||||||+||+++.++.++|+|||++......
T Consensus 89 e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~---- 163 (292)
T cd06644 89 EFCPGGAVDAIMLEL-DRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT---- 163 (292)
T ss_pred ecCCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccc----
Confidence 999999998887653 346899999999999999999999999999999999999999999999999987542210
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhc-----CCCCCChhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 876 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~ 876 (975)
........+++.|+|||++. ...++.++|+|||||++|+|++|..||...+.
T Consensus 164 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~ 220 (292)
T cd06644 164 -----------------------LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP 220 (292)
T ss_pred -----------------------ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH
Confidence 01122346888999999985 34467899999999999999999999988776
Q ss_pred HHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhc
Q 002051 877 QKTFANILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRC 941 (975)
Q Consensus 877 ~~~~~~i~~~~~-~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~ 941 (975)
...+.++..... ..+....++..+.+||.+||..||++||+ ++++++||||..++|.+...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~~~~~~~~ 282 (292)
T cd06644 221 MRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPS----AAQLLEHPFVSSVTSNRPLR 282 (292)
T ss_pred HHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcC----HHHHhcCccccccccchhHH
Confidence 666555544332 22233457789999999999999999999 99999999999999987544
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-34 Score=317.86 Aligned_cols=229 Identities=25% Similarity=0.411 Sum_probs=171.8
Q ss_pred ccccccCCceEEEEEEEe--CCCeEEEEEEeccchh----------------------cccc--ccCCeEEEEEeccCCC
Q 002051 674 IKPLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVM----------------------LNRN--KTKTHVCLITDYCPGG 727 (975)
Q Consensus 674 ~~~LG~G~fG~Vy~a~~~--~t~~~vAiK~l~~~~~----------------------~~~~--~~~~~~~lV~Ey~~gg 727 (975)
.++||+|+||+||+|+++ .+++.||+|.+..... .... ....++|+||||+ ++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~-~~ 84 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA-EH 84 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEecc-CC
Confidence 468999999999999976 4678999998864321 0000 1356789999999 56
Q ss_pred CHHHHHhhC-------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe----cCCcEEEeeccCCCccCC
Q 002051 728 ELFLLLDRQ-------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ----GNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 728 sL~~~l~~~-------~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~----~~g~vkL~DFG~a~~~~~ 796 (975)
+|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||+. .++.+||+|||+++....
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~ 164 (317)
T cd07868 85 DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 164 (317)
T ss_pred CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCC
Confidence 999887642 123589999999999999999999999999999999999994 557899999999965432
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
... .........||+.|+|||++.+. .++.++||||+||++|+|++|++||.+..
T Consensus 165 ~~~------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 220 (317)
T cd07868 165 PLK------------------------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred CCc------------------------cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence 110 01112345789999999999874 58899999999999999999999997533
Q ss_pred H---------HHHHHHHHhcCC-----------CCC-------------------------CCCCCcHHHHHHHHHhccc
Q 002051 876 R---------QKTFANILHKDL-----------KFP-------------------------SSTPTSLHAKQLMYRLLHR 910 (975)
Q Consensus 876 ~---------~~~~~~i~~~~~-----------~~p-------------------------~~~~~s~~~~~li~~~L~~ 910 (975)
. ...+..+..... ..+ .....+..+.+||++||++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~ 300 (317)
T cd07868 221 EDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTM 300 (317)
T ss_pred ccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhcc
Confidence 2 122222211000 000 0012345788999999999
Q ss_pred CccccCCChhhHHHHHcCCCc
Q 002051 911 DPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 911 dP~~R~t~~~~~~elL~Hp~f 931 (975)
||.+||| ++|+|+||||
T Consensus 301 dP~~R~t----~~e~l~hp~f 317 (317)
T cd07868 301 DPIKRIT----SEQAMQDPYF 317 (317)
T ss_pred CcccCCC----HHHHhcCCCC
Confidence 9999999 9999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-34 Score=315.21 Aligned_cols=236 Identities=25% Similarity=0.434 Sum_probs=190.2
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-------------------------hccccccCCeEEEEE
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------------------MLNRNKTKTHVCLIT 721 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------------------~~~~~~~~~~~~lV~ 721 (975)
..++|.++++||.|+||.||+|++..+++.||+|.+.... +........++|+||
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 83 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 83 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence 3578999999999999999999999999999999886431 111222567899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
||+. ++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+|||++.++.++|+|||++.......
T Consensus 84 e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~--- 158 (301)
T cd07873 84 EYLD-KDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT--- 158 (301)
T ss_pred eccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC---
Confidence 9995 6999988764 3468999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~ 880 (975)
.......+++.|+|||++.+. .++.++|||||||++|+|++|++||.+.+..+.+
T Consensus 159 ------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~ 214 (301)
T cd07873 159 ------------------------KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQL 214 (301)
T ss_pred ------------------------CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 011223568899999998764 4788999999999999999999999987776655
Q ss_pred HHHHhcC-------------------CCCCC---------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCcc
Q 002051 881 ANILHKD-------------------LKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932 (975)
Q Consensus 881 ~~i~~~~-------------------~~~p~---------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~ 932 (975)
..+.... ..++. ...+++.+++||.+||++||.+||| ++|+|.||||+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t----~~eil~h~~f~ 290 (301)
T cd07873 215 HFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRIS----AEEAMKHPYFH 290 (301)
T ss_pred HHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcC----HHHHhcCcccc
Confidence 4443210 01111 1246788999999999999999999 99999999998
Q ss_pred CCC
Q 002051 933 GVN 935 (975)
Q Consensus 933 ~~~ 935 (975)
.+.
T Consensus 291 ~~~ 293 (301)
T cd07873 291 CLG 293 (301)
T ss_pred ccc
Confidence 775
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-34 Score=312.46 Aligned_cols=234 Identities=29% Similarity=0.399 Sum_probs=190.3
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------c----c---------cc------ccCCe
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------L----N---------RN------KTKTH 716 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------~----~---------~~------~~~~~ 716 (975)
..+.|++.+.||.|+||.||+|.+..+++.||+|++..... + . .. ....+
T Consensus 14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 93 (282)
T cd06636 14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQ 93 (282)
T ss_pred hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCE
Confidence 35689999999999999999999999999999998754310 0 0 00 12467
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
+|+||||+++|+|.+++.......+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.....
T Consensus 94 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~ 173 (282)
T cd06636 94 LWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR 173 (282)
T ss_pred EEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhc
Confidence 89999999999999999875556789999999999999999999999999999999999999999999999998854321
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhc-----CCCCCChhHHHHHHHHHHHHHhCCCCC
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPF 871 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~~~k~DIWSLG~il~ell~G~~Pf 871 (975)
. ........|++.|+|||.+. +..++.++|+|||||++|+|++|..||
T Consensus 174 ~---------------------------~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~ 226 (282)
T cd06636 174 T---------------------------VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPL 226 (282)
T ss_pred c---------------------------ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCc
Confidence 0 01123456899999999986 345788999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 872 RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 872 ~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
........+..+............++..+.+||.+||+.||.+||| +.|||.||||
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~ell~~~~~ 282 (282)
T cd06636 227 CDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPS----TEQLLKHPFI 282 (282)
T ss_pred cccCHHhhhhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcC----HHHHhcCCCC
Confidence 8766555554444332222223457889999999999999999999 9999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=312.18 Aligned_cols=228 Identities=39% Similarity=0.658 Sum_probs=186.7
Q ss_pred cccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEEEEEecc
Q 002051 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCLITDYC 724 (975)
Q Consensus 671 y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~lV~Ey~ 724 (975)
|++++.||+|+||+||+|++..+++.||+|++..... ........++|+||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 7889999999999999999999999999999876531 11112578899999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCc
Q 002051 725 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 804 (975)
Q Consensus 725 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~ 804 (975)
.+++|.+++... ..+++..+..++.||+.||.+||++||+|+||||+|||++.++.++|+|||.+.....
T Consensus 81 ~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~-------- 150 (260)
T PF00069_consen 81 PGGSLQDYLQKN--KPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSE-------- 150 (260)
T ss_dssp TTEBHHHHHHHH--SSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTS--------
T ss_pred cccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--------
Confidence 998999999843 5689999999999999999999999999999999999999999999999999854210
Q ss_pred chhhhhccCCCCCcccccccccccccccCCCCccchhhhc-CCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHH---HHH
Q 002051 805 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ---KTF 880 (975)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~---~~~ 880 (975)
.........+++.|+|||++. +..++.++||||||+++|+|++|..||...... ..+
T Consensus 151 -------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~ 211 (260)
T PF00069_consen 151 -------------------NNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEII 211 (260)
T ss_dssp -------------------TTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHH
T ss_pred -------------------cccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhh
Confidence 111233457899999999998 788899999999999999999999999987333 333
Q ss_pred HHHHhcCCCCCC--CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 881 ANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 881 ~~i~~~~~~~p~--~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
............ ....+..+.++|.+||+.||++||| +.++++||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~----~~~l~~~~~~ 260 (260)
T PF00069_consen 212 EKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPS----AEELLKHPWF 260 (260)
T ss_dssp HHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTT----HHHHHTSGGG
T ss_pred hhcccccccccccccchhHHHHHHHHHHHccCChhHCcC----HHHHhcCCCC
Confidence 333322111111 1122478999999999999999999 9999999998
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-34 Score=328.04 Aligned_cols=242 Identities=24% Similarity=0.397 Sum_probs=190.4
Q ss_pred cCCCcccccccccCCceEEEEEEEe--CCCeEEEEEEeccch-------------------hccccccCCeEEEEEeccC
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELC--GSGQYFAMKAMDKGV-------------------MLNRNKTKTHVCLITDYCP 725 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~--~t~~~vAiK~l~~~~-------------------~~~~~~~~~~~~lV~Ey~~ 725 (975)
...+|.+++.||.|+||.||+|... .+++.||+|.+.... ++.......++|+||||+
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~- 168 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGKTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKY- 168 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhc-
Confidence 3457999999999999999999764 456889999886432 112223567899999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcc
Q 002051 726 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 805 (975)
Q Consensus 726 ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 805 (975)
+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||+++.......
T Consensus 169 ~~~l~~~l~~~--~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~------ 240 (392)
T PHA03207 169 KCDLFTYVDRS--GPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD------ 240 (392)
T ss_pred CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccc------
Confidence 57999998543 5699999999999999999999999999999999999999999999999999865432110
Q ss_pred hhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHH
Q 002051 806 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR---QKTFAN 882 (975)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~---~~~~~~ 882 (975)
........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+... ...+..
T Consensus 241 -------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~ 301 (392)
T PHA03207 241 -------------------TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRS 301 (392)
T ss_pred -------------------cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHH
Confidence 0112346799999999999999999999999999999999999999976432 222222
Q ss_pred HHhc----C-------------------------CCCCC---CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCC
Q 002051 883 ILHK----D-------------------------LKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930 (975)
Q Consensus 883 i~~~----~-------------------------~~~p~---~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~ 930 (975)
++.. . +..+. ....+.++.+||++||.+||++||| +.++|.|||
T Consensus 302 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rps----a~e~l~~p~ 377 (392)
T PHA03207 302 IIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPS----AQDILSLPL 377 (392)
T ss_pred HHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCC----HHHHhhCch
Confidence 2210 0 00110 0124567889999999999999999 999999999
Q ss_pred ccCCCcchhh
Q 002051 931 FKGVNWALVR 940 (975)
Q Consensus 931 f~~~~~~~~~ 940 (975)
|...+|..+.
T Consensus 378 f~~~~~~~~~ 387 (392)
T PHA03207 378 FTKEPINLLN 387 (392)
T ss_pred hhccchhhhc
Confidence 9998887663
|
|
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-34 Score=345.72 Aligned_cols=239 Identities=26% Similarity=0.419 Sum_probs=191.9
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------cccc--ccCCe
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRN--KTKTH 716 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~--~~~~~ 716 (975)
....++|.++++||+|+||+||+|++..+++.||+|++....+ +..+ .....
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 3456799999999999999999999999999999998864311 1111 13467
Q ss_pred EEEEEeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC-------CCeecCCCCCCEEEec--------
Q 002051 717 VCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQ-------GIIYRDLKPENVLLQG-------- 779 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qIl~aL~yLH~~-------gIiHrDIKp~NILl~~-------- 779 (975)
+|||||||++++|.++|... ....+++..++.|+.||+.||.|||+. +||||||||+||||+.
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 89999999999999998752 234699999999999999999999994 4999999999999964
Q ss_pred ---------CCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC--CCC
Q 002051 780 ---------NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGH 848 (975)
Q Consensus 780 ---------~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~ 848 (975)
.+.+||+|||++...... ......+||+.|+|||++.+ ..+
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~----------------------------s~~~s~vGTp~YmAPEvL~ge~~~~ 220 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIE----------------------------SMAHSCVGTPYYWSPELLLHETKSY 220 (1021)
T ss_pred cccccccCCCCceEEccCCcccccccc----------------------------ccccccCCCccccCHHHHhccCCCC
Confidence 234899999998654211 01124579999999999965 457
Q ss_pred CChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 849 TSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 849 ~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
+.++|||||||+||+|++|..||........+...+.....++. ...+.++.+||..||..+|.+||+ +.|+|.|
T Consensus 221 s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lpi-~~~S~eL~dLI~~~L~~dPeeRPS----a~QlL~h 295 (1021)
T PTZ00266 221 DDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLPI-KGKSKELNILIKNLLNLSAKERPS----ALQCLGY 295 (1021)
T ss_pred CchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCCc-CCCCHHHHHHHHHHhcCChhHCcC----HHHHhcc
Confidence 88999999999999999999999876655555444444333332 346889999999999999999999 9999999
Q ss_pred CCccCCCc
Q 002051 929 PFFKGVNW 936 (975)
Q Consensus 929 p~f~~~~~ 936 (975)
|||+.+..
T Consensus 296 ~~ik~i~~ 303 (1021)
T PTZ00266 296 QIIKNVGP 303 (1021)
T ss_pred HHHhhcCC
Confidence 99987654
|
|
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-34 Score=324.05 Aligned_cols=234 Identities=26% Similarity=0.396 Sum_probs=181.6
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------hccccccCCeEEEEEeccCCCC
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------MLNRNKTKTHVCLITDYCPGGE 728 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------~~~~~~~~~~~~lV~Ey~~ggs 728 (975)
...+|++++.||+|+||.||+|.+..+++.||+|+..+.. +........+.|+||||+ .++
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~-~~~ 142 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY-SSD 142 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEcc-CCc
Confidence 3457999999999999999999999999999999865432 122223567889999999 568
Q ss_pred HHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhh
Q 002051 729 LFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEK 808 (975)
Q Consensus 729 L~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~ 808 (975)
|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 143 l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~----------- 210 (357)
T PHA03209 143 LYTYLTKR-SRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA----------- 210 (357)
T ss_pred HHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccC-----------
Confidence 99988654 356899999999999999999999999999999999999999999999999998532110
Q ss_pred hhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCC-CCCCCCH---------HH
Q 002051 809 KRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYT-PFRGKTR---------QK 878 (975)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~-Pf~~~~~---------~~ 878 (975)
.......||+.|+|||++.+..++.++|||||||++|+|+++.. +|..... ..
T Consensus 211 -----------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~ 273 (357)
T PHA03209 211 -----------------PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHS 273 (357)
T ss_pred -----------------cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHH
Confidence 11123568999999999999999999999999999999997544 4433211 11
Q ss_pred HHHHHHhcC----CCCC----------------------------CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 879 TFANILHKD----LKFP----------------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 879 ~~~~i~~~~----~~~p----------------------------~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
.+..++... ..++ ....++.++.+||.+||++||.+||| +.|+|
T Consensus 274 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpt----a~e~l 349 (357)
T PHA03209 274 HLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPS----AEEIL 349 (357)
T ss_pred HHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcC----HHHHh
Confidence 111211110 0011 01234567788999999999999999 99999
Q ss_pred cCCCccCC
Q 002051 927 KHPFFKGV 934 (975)
Q Consensus 927 ~Hp~f~~~ 934 (975)
+||||+.+
T Consensus 350 ~hp~f~~~ 357 (357)
T PHA03209 350 NYPMFAQL 357 (357)
T ss_pred cCchhccC
Confidence 99999864
|
|
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=318.72 Aligned_cols=239 Identities=21% Similarity=0.344 Sum_probs=184.3
Q ss_pred cccccccC--CceEEEEEEEeCCCeEEEEEEeccch--------------------------hccccccCCeEEEEEecc
Q 002051 673 PIKPLGSG--DTGSVHLVELCGSGQYFAMKAMDKGV--------------------------MLNRNKTKTHVCLITDYC 724 (975)
Q Consensus 673 i~~~LG~G--~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------------~~~~~~~~~~~~lV~Ey~ 724 (975)
++++||+| +||+||++.++.+|+.||+|.+.... +......++++|+|||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 57789999 78999999999999999999987531 011222567889999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCc
Q 002051 725 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 804 (975)
Q Consensus 725 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~ 804 (975)
++|+|.+++..+....+++..++.++.||+.||.|||++||+||||||+|||++.++.++++||+.+..........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~--- 158 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL--- 158 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccc---
Confidence 99999999976544568999999999999999999999999999999999999999999999998653321100000
Q ss_pred chhhhhccCCCCCcccccccccccccccCCCCccchhhhcC--CCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002051 805 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 882 (975)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~ 882 (975)
...........++..|+|||++.+ ..++.++|||||||++|+|++|+.||...........
T Consensus 159 -----------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~ 221 (327)
T cd08227 159 -----------------RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLE 221 (327)
T ss_pred -----------------cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHH
Confidence 000001123457788999999976 4588999999999999999999999987555444333
Q ss_pred HHhcCCC--------------------------------------------CCCCCCCcHHHHHHHHHhcccCccccCCC
Q 002051 883 ILHKDLK--------------------------------------------FPSSTPTSLHAKQLMYRLLHRDPKSRLGS 918 (975)
Q Consensus 883 i~~~~~~--------------------------------------------~p~~~~~s~~~~~li~~~L~~dP~~R~t~ 918 (975)
......+ .+.....++.+.+||.+||++||++|||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt- 300 (327)
T cd08227 222 KLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPS- 300 (327)
T ss_pred HhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCC-
Confidence 3322111 0011224678999999999999999999
Q ss_pred hhhHHHHHcCCCccCCC
Q 002051 919 HEGANEIKKHPFFKGVN 935 (975)
Q Consensus 919 ~~~~~elL~Hp~f~~~~ 935 (975)
++++++||||+.++
T Consensus 301 ---~~ell~~p~f~~~~ 314 (327)
T cd08227 301 ---ASTLLNHSFFKQIK 314 (327)
T ss_pred ---HHHHhcChhhhhcc
Confidence 99999999998764
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=320.02 Aligned_cols=230 Identities=26% Similarity=0.410 Sum_probs=193.6
Q ss_pred cccccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc-----------------------cccccCCeE
Q 002051 661 DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----------------------NRNKTKTHV 717 (975)
Q Consensus 661 ~~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~-----------------------~~~~~~~~~ 717 (975)
...+.+....+++++.||+|.||.||+|....+ ..||+|.++...+. ........+
T Consensus 198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~pi 276 (468)
T KOG0197|consen 198 RDPWEIPREELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPI 276 (468)
T ss_pred cCCeeecHHHHHHHHHhcCCccceEEEEEEcCC-CcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCce
Confidence 345677888899999999999999999999543 47899988764321 111134569
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|||||||+.|+|.++|....+..+.......++.|||+|++||+++++|||||-..|||++.+..+||+|||+|+....+
T Consensus 277 yIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~ 356 (468)
T KOG0197|consen 277 YIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDD 356 (468)
T ss_pred EEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCC
Confidence 99999999999999999866778999999999999999999999999999999999999999999999999999843311
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 876 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~ 876 (975)
. +.......-+..|.|||.+....++.|+||||||++||||+| |+.||.+.+.
T Consensus 357 ~--------------------------Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn 410 (468)
T KOG0197|consen 357 E--------------------------YTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN 410 (468)
T ss_pred c--------------------------eeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH
Confidence 1 111112223567999999999999999999999999999996 9999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCC
Q 002051 877 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS 918 (975)
Q Consensus 877 ~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~ 918 (975)
.+.+..+.++ +.+|.+..+++++.++|..||..+|++|||+
T Consensus 411 ~ev~~~le~G-yRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF 451 (468)
T KOG0197|consen 411 EEVLELLERG-YRLPRPEGCPDEVYELMKSCWHEDPEDRPTF 451 (468)
T ss_pred HHHHHHHhcc-CcCCCCCCCCHHHHHHHHHHhhCCcccCCCH
Confidence 9888777654 6788888899999999999999999999994
|
|
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=307.32 Aligned_cols=229 Identities=31% Similarity=0.484 Sum_probs=185.8
Q ss_pred CCccccccc--ccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------ccccccCCeEEEEEeccCC
Q 002051 669 QHFRPIKPL--GSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------LNRNKTKTHVCLITDYCPG 726 (975)
Q Consensus 669 ~~y~i~~~L--G~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------~~~~~~~~~~~lV~Ey~~g 726 (975)
++|.+.+.+ |.|+||.||++.++.++..+|+|.+..... .......+.+|+||||++|
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~ 93 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAIEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKD 93 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchhhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCC
Confidence 466776666 999999999999999999999999865421 1111256688999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC-cEEEeeccCCCccCCCCCCCCCcc
Q 002051 727 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKPQLLLPTT 805 (975)
Q Consensus 727 gsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g-~vkL~DFG~a~~~~~~~~~~~~~~ 805 (975)
++|.+++... ..+++..++.++.||+.||.|||+.|++||||||+||+++.++ .++|+|||++.....
T Consensus 94 ~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~--------- 162 (267)
T PHA03390 94 GDLFDLLKKE--GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGT--------- 162 (267)
T ss_pred CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCC---------
Confidence 9999999774 3799999999999999999999999999999999999999988 999999998854321
Q ss_pred hhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHH
Q 002051 806 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF-ANIL 884 (975)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~-~~i~ 884 (975)
.....|+..|+|||++.+..++.++|+|||||++|+|++|..||......... ..+.
T Consensus 163 ----------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~ 220 (267)
T PHA03390 163 ----------------------PSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLL 220 (267)
T ss_pred ----------------------CccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHH
Confidence 11235788999999999988999999999999999999999999865433221 1111
Q ss_pred h-cCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 885 H-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 885 ~-~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
. .....+.....+..+.+||.+||+.+|.+|++. ++++|+||||++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~---~~~~l~h~~~~~ 267 (267)
T PHA03390 221 KRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTN---YNEIIKHPFLKI 267 (267)
T ss_pred HhhcccCCcccccCHHHHHHHHHHhccChhhCCch---HHHHhcCCcccC
Confidence 1 111222333578999999999999999999961 699999999974
|
|
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=302.03 Aligned_cols=230 Identities=27% Similarity=0.414 Sum_probs=194.4
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------------------hccccccCCeEEEEEec
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------------------MLNRNKTKTHVCLITDY 723 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------------~~~~~~~~~~~~lV~Ey 723 (975)
+|.+.+.||+|+||.||+|.+..+++.|++|.+.... +..........|+||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4888999999999999999999999999999876431 11122256789999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
++|++|.+++.......++...+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~----- 155 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT----- 155 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCcc-----
Confidence 999999999987545679999999999999999999999999999999999999999999999999886543110
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i 883 (975)
.......|++.|+|||++.+..++.++|+|||||++|+|++|+.||...+.......+
T Consensus 156 ----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~ 213 (256)
T cd08529 156 ----------------------NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKI 213 (256)
T ss_pred ----------------------chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 1112346889999999999988999999999999999999999999988877777766
Q ss_pred HhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 884 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 884 ~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
..+.... ....++..+.++|.+||+.+|++||+ +.+++.|||+
T Consensus 214 ~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~ll~~~~~ 256 (256)
T cd08529 214 IRGVFPP-VSQMYSQQLAQLIDQCLTKDYRQRPD----TFQLLRNPSL 256 (256)
T ss_pred HcCCCCC-CccccCHHHHHHHHHHccCCcccCcC----HHHHhhCCCC
Confidence 6654332 22257889999999999999999999 9999999985
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=327.23 Aligned_cols=236 Identities=25% Similarity=0.379 Sum_probs=183.3
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------hccccccCCeEEEEEeccCCCC
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------MLNRNKTKTHVCLITDYCPGGE 728 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------~~~~~~~~~~~~lV~Ey~~ggs 728 (975)
....|.+.+.||+|+||.||+|.+..+++.||||...... ++.........|+|||++ .++
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~-~~~ 245 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWYASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKY-RSD 245 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEcc-CCC
Confidence 3557999999999999999999999999999999643211 112223567889999999 579
Q ss_pred HHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhh
Q 002051 729 LFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEK 808 (975)
Q Consensus 729 L~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~ 808 (975)
|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 246 L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~--------- 315 (461)
T PHA03211 246 LYTYLGAR-LRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS--------- 315 (461)
T ss_pred HHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccc---------
Confidence 99988754 24699999999999999999999999999999999999999999999999999865431100
Q ss_pred hhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC-------HHHHHH
Q 002051 809 KRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT-------RQKTFA 881 (975)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~-------~~~~~~ 881 (975)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..|+.... ....+.
T Consensus 316 ----------------~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~ 379 (461)
T PHA03211 316 ----------------TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQIL 379 (461)
T ss_pred ----------------cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHH
Confidence 011124579999999999999999999999999999999999876543211 112222
Q ss_pred HHHh-cCCC---CC-----------------------------CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 882 NILH-KDLK---FP-----------------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 882 ~i~~-~~~~---~p-----------------------------~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
+++. .... ++ .....+.++.+||.+||++||.+||| +.|||+|
T Consensus 380 ~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPs----a~elL~h 455 (461)
T PHA03211 380 RIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPS----AAELLRL 455 (461)
T ss_pred HHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcC----HHHHhhC
Confidence 2222 1110 10 01134568899999999999999999 9999999
Q ss_pred CCccC
Q 002051 929 PFFKG 933 (975)
Q Consensus 929 p~f~~ 933 (975)
|||++
T Consensus 456 p~f~~ 460 (461)
T PHA03211 456 PLFQS 460 (461)
T ss_pred cccCC
Confidence 99974
|
|
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=306.95 Aligned_cols=231 Identities=27% Similarity=0.452 Sum_probs=188.5
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh------------------------ccccccCCeEEEEEe
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM------------------------LNRNKTKTHVCLITD 722 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~------------------------~~~~~~~~~~~lV~E 722 (975)
..++|++.+.||.|+||.||+|.+..+++.||+|+++.... .........+|+|||
T Consensus 7 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e 86 (267)
T cd06645 7 PQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICME 86 (267)
T ss_pred cHHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Confidence 35689999999999999999999999999999999764310 111125678999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
|+++++|.+++... +.+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 87 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~----- 159 (267)
T cd06645 87 FCGGGSLQDIYHVT--GPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT----- 159 (267)
T ss_pred ccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCc-----
Confidence 99999999998764 56999999999999999999999999999999999999999999999999998543211
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhc---CCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
........|++.|+|||++. ...++.++|+|||||++|+|++|..||........
T Consensus 160 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~ 217 (267)
T cd06645 160 ----------------------IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA 217 (267)
T ss_pred ----------------------ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh
Confidence 01123457899999999984 45578899999999999999999999976655444
Q ss_pred HHHHHhcCCCCCC---CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCC
Q 002051 880 FANILHKDLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930 (975)
Q Consensus 880 ~~~i~~~~~~~p~---~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~ 930 (975)
...........+. ...++..+.+||.+||..+|++||| +++|+.|||
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~----~~~ll~~~~ 267 (267)
T cd06645 218 LFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPT----AEKLLQHPF 267 (267)
T ss_pred HHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcC----HHHHhcCCC
Confidence 4444433333222 2246778999999999999999999 999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-33 Score=304.27 Aligned_cols=231 Identities=42% Similarity=0.748 Sum_probs=192.2
Q ss_pred cccCCceEEEEEEEeCCCeEEEEEEeccchhc---------------------------cccccCCeEEEEEeccCCCCH
Q 002051 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVML---------------------------NRNKTKTHVCLITDYCPGGEL 729 (975)
Q Consensus 677 LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~---------------------------~~~~~~~~~~lV~Ey~~ggsL 729 (975)
||.|+||.||+|.+..+++.||+|++.+.... ....+..++|+||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 79999999999999999999999998653211 111256788999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhh
Q 002051 730 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 809 (975)
Q Consensus 730 ~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 809 (975)
.+++.+. ..+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~------------ 146 (262)
T cd05572 81 WTILRDR--GLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSG------------ 146 (262)
T ss_pred HHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcc------------
Confidence 9999764 45899999999999999999999999999999999999999999999999998654311
Q ss_pred hccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHhcC
Q 002051 810 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT--RQKTFANILHKD 887 (975)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~--~~~~~~~i~~~~ 887 (975)
.......|++.|++||.+.+..++.++|+|||||++|+|++|..||.... ....+..+....
T Consensus 147 ----------------~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 210 (262)
T cd05572 147 ----------------QKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGN 210 (262)
T ss_pred ----------------cccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccC
Confidence 01123468889999999988889999999999999999999999998776 666666666433
Q ss_pred CCCCCCCCCcHHHHHHHHHhcccCccccCCC-hhhHHHHHcCCCccCCCcc
Q 002051 888 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWA 937 (975)
Q Consensus 888 ~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~-~~~~~elL~Hp~f~~~~~~ 937 (975)
.....+...+..+.+||.+||..+|++|+++ ..+++|+++||||++.+|.
T Consensus 211 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~ 261 (262)
T cd05572 211 GKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDWE 261 (262)
T ss_pred CCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCCCC
Confidence 3333333458899999999999999999983 3458999999999999885
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-33 Score=307.32 Aligned_cols=230 Identities=26% Similarity=0.425 Sum_probs=184.0
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------------------hccccccCCeEEEEEec
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------------------MLNRNKTKTHVCLITDY 723 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------------~~~~~~~~~~~~lV~Ey 723 (975)
+|++++.||.|+||.||+|.+..+++.||+|.+.... +........++|+||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 5889999999999999999999999999999876431 11112256789999999
Q ss_pred cCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 724 CPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 724 ~~ggsL~~~l~~~~-~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
++ ++|.+++.... ...+++..++.++.||+.||.|||++||+|+||||+|||++.++.++|+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~---- 155 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV---- 155 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc----
Confidence 96 68998887543 2568999999999999999999999999999999999999999999999999985432110
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~ 881 (975)
.......+++.|+|||++.+. .++.++|||||||++|+|++|++||.+.+......
T Consensus 156 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~ 212 (285)
T cd07861 156 -----------------------RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLF 212 (285)
T ss_pred -----------------------ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 111233578899999998764 46889999999999999999999998876654443
Q ss_pred HHHhcCC------------------CCC---------CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 882 NILHKDL------------------KFP---------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 882 ~i~~~~~------------------~~p---------~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
.+..... .++ ....++.++.+||++||+.||.+||| +.+|+.||||
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt----~~~ll~~~~~ 285 (285)
T cd07861 213 RIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRIS----AKKALNHPYF 285 (285)
T ss_pred HHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCC----HHHHhcCCCC
Confidence 3322100 000 11346788999999999999999999 9999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-33 Score=302.56 Aligned_cols=238 Identities=44% Similarity=0.820 Sum_probs=197.2
Q ss_pred cccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEEEeccCCCCH
Q 002051 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLITDYCPGGEL 729 (975)
Q Consensus 677 LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV~Ey~~ggsL 729 (975)
||.|+||.||+|.+..+|+.||+|++..... ..........|+||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 6899999999999999999999999865421 0111256789999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhh
Q 002051 730 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 809 (975)
Q Consensus 730 ~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 809 (975)
.+++.+. ..+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++...........
T Consensus 81 ~~~l~~~--~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~------- 151 (265)
T cd05579 81 ASLLENV--GSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINL------- 151 (265)
T ss_pred HHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccc-------
Confidence 9999875 3689999999999999999999999999999999999999999999999999865332111000
Q ss_pred hccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC
Q 002051 810 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 889 (975)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~ 889 (975)
...........++..|++||.+.+..++.++|+|||||++|+|++|..||........+..+..+...
T Consensus 152 ------------~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 219 (265)
T cd05579 152 ------------NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIE 219 (265)
T ss_pred ------------ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcC
Confidence 00011223456788999999998888899999999999999999999999988888888888776666
Q ss_pred CCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCc
Q 002051 890 FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936 (975)
Q Consensus 890 ~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~ 936 (975)
++.....+..+.+||.+||+.+|.+|||+. .+.++|+||||++++|
T Consensus 220 ~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~-~~~~~l~~~~~~~~~~ 265 (265)
T cd05579 220 WPEDVEVSDEAIDLISKLLVPDPEKRLGAK-SIEEIKNHPFFKGIDW 265 (265)
T ss_pred CCccccCCHHHHHHHHHHhcCCHhhcCCCc-cHHHHhcCccccCCCC
Confidence 666655689999999999999999999921 1399999999999998
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-35 Score=318.61 Aligned_cols=231 Identities=26% Similarity=0.442 Sum_probs=201.0
Q ss_pred ccccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------hc---cccccCCeEEEEEecc
Q 002051 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------ML---NRNKTKTHVCLITDYC 724 (975)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------~~---~~~~~~~~~~lV~Ey~ 724 (975)
..|+|..+...-++-||.|+.|-||+++. -++.||||.++.-. ++ ........+|||||||
T Consensus 117 e~WeiPFe~IsELeWlGSGaQGAVF~Grl--~netVAVKKV~elkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfC 194 (904)
T KOG4721|consen 117 ELWEIPFEEISELEWLGSGAQGAVFLGRL--HNETVAVKKVRELKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFC 194 (904)
T ss_pred hhccCCHHHhhhhhhhccCcccceeeeec--cCceehhHHHhhhhhhhHHHHHhccCcceeeEeeeecCCceeEEeeecc
Confidence 45677777788888999999999999998 46789999765321 11 1112567889999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCc
Q 002051 725 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 804 (975)
Q Consensus 725 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~ 804 (975)
..|.|+.+|+.. .++.......+..+|+.|++|||.+.|||||||.-||||..+..|||+|||-++.....
T Consensus 195 a~GqL~~VLka~--~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~------- 265 (904)
T KOG4721|consen 195 AQGQLYEVLKAG--RPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK------- 265 (904)
T ss_pred ccccHHHHHhcc--CccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhh-------
Confidence 999999999874 67999999999999999999999999999999999999999999999999988654321
Q ss_pred chhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 002051 805 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANIL 884 (975)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~ 884 (975)
....+|+||..|||||+++..+++.|+||||||++||||+||..||.+-+...++..+-
T Consensus 266 ---------------------STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVG 324 (904)
T KOG4721|consen 266 ---------------------STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVG 324 (904)
T ss_pred ---------------------hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEecc
Confidence 23357899999999999999999999999999999999999999999888877777777
Q ss_pred hcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 885 HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 885 ~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
...+.+|.+..++.-++-||+.||+-.|.+||+ +.+||.|
T Consensus 325 sNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPS----Frqil~H 364 (904)
T KOG4721|consen 325 SNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPS----FRQILLH 364 (904)
T ss_pred CCcccccCcccCchHHHHHHHHHHhcCCCCCcc----HHHHHHH
Confidence 778888888889999999999999999999999 8999988
|
|
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=306.93 Aligned_cols=230 Identities=26% Similarity=0.404 Sum_probs=184.7
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-------------------------ccccccCCeEEEEEec
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-------------------------LNRNKTKTHVCLITDY 723 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-------------------------~~~~~~~~~~~lV~Ey 723 (975)
++|++++.||+|+||.||+|.+..+++.||+|.+.+... ..........++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 368999999999999999999999999999999864310 1111256778999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
+++++|..+ ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++.....
T Consensus 81 ~~~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~------- 147 (279)
T cd06619 81 MDGGSLDVY------RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVN------- 147 (279)
T ss_pred CCCCChHHh------hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccc-------
Confidence 999998654 2378899999999999999999999999999999999999999999999999854321
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCH-------
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR------- 876 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~------- 876 (975)
......+|+..|+|||++.+..++.++|+|||||++|+|++|+.||.....
T Consensus 148 ----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~ 205 (279)
T cd06619 148 ----------------------SIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMP 205 (279)
T ss_pred ----------------------ccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccch
Confidence 012235789999999999998899999999999999999999999965221
Q ss_pred HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcc
Q 002051 877 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 937 (975)
Q Consensus 877 ~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~ 937 (975)
......+.............+.++.+||.+||+.+|++||+ +++++.||||...+-.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~----~~eil~~~~~~~~~~~ 262 (279)
T cd06619 206 LQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPA----PENLMDHPFIVQYNDG 262 (279)
T ss_pred HHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCC----HHHHhcCcccccccCc
Confidence 12222222222222122346789999999999999999999 9999999999876443
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-33 Score=306.80 Aligned_cols=246 Identities=19% Similarity=0.295 Sum_probs=191.7
Q ss_pred cccCCCcccccccccCCceEEEEEEEeC-----CCeEEEEEEeccch-------------------------hccccccC
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGV-------------------------MLNRNKTK 714 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~-----t~~~vAiK~l~~~~-------------------------~~~~~~~~ 714 (975)
.+..++|++.+.||+|+||.||+|.++. .+..||+|.+.... +.......
T Consensus 2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (288)
T cd05061 2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 81 (288)
T ss_pred cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 4566789999999999999999997653 35689999875331 11112256
Q ss_pred CeEEEEEeccCCCCHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEe
Q 002051 715 THVCLITDYCPGGELFLLLDRQP--------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLT 786 (975)
Q Consensus 715 ~~~~lV~Ey~~ggsL~~~l~~~~--------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~ 786 (975)
...|+||||+++|+|.+++.... ...++...+..++.||+.||.|||++||+||||||+|||++.++.++|+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~ 161 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIG 161 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEEC
Confidence 67899999999999999997532 1234667888999999999999999999999999999999999999999
Q ss_pred eccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh
Q 002051 787 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY 866 (975)
Q Consensus 787 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~ 866 (975)
|||+++....... ........++..|+|||.+.+..++.++|+|||||++|+|++
T Consensus 162 Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~ 216 (288)
T cd05061 162 DFGMTRDIYETDY-------------------------YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 216 (288)
T ss_pred cCCcccccccccc-------------------------ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHh
Confidence 9999865321100 001122345778999999998889999999999999999998
Q ss_pred -CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc--CCCccCCCc
Q 002051 867 -GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK--HPFFKGVNW 936 (975)
Q Consensus 867 -G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~--Hp~f~~~~~ 936 (975)
|..||.+....+....+..... .+.....+..+.+++.+||+.||++|||+.+.++.+.+ ||||++++|
T Consensus 217 ~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~~ 288 (288)
T cd05061 217 LAEQPYQGLSNEQVLKFVMDGGY-LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 288 (288)
T ss_pred CCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCCC
Confidence 8999988887776666655432 22233467899999999999999999994444333333 999999998
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-33 Score=306.27 Aligned_cols=229 Identities=23% Similarity=0.425 Sum_probs=181.0
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEEEEEec
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCLITDY 723 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~lV~Ey 723 (975)
+|++++.||.|+||.||+|.+..+|+.||+|.+..... .....+..++|+|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 58899999999999999999999999999998864211 1112256789999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
+. ++|.+++... .+.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~----- 153 (284)
T cd07839 81 CD-QDLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV----- 153 (284)
T ss_pred CC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC-----
Confidence 95 6888887653 3569999999999999999999999999999999999999999999999999986533110
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCC-CCCCHHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPF-RGKTRQKTFA 881 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf-~~~~~~~~~~ 881 (975)
.......+++.|+|||++.+. .++.++|||||||++|+|++|..|| .+.+....+.
T Consensus 154 ----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~ 211 (284)
T cd07839 154 ----------------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLK 211 (284)
T ss_pred ----------------------CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHH
Confidence 111234578899999998774 4688999999999999999988875 4454444444
Q ss_pred HHHhcC-----------------CCCC----------CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 882 NILHKD-----------------LKFP----------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 882 ~i~~~~-----------------~~~p----------~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
.+.... ..++ ....++.++.+||.+||+.||.+||| +++++.||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t----~~~il~h~~f 284 (284)
T cd07839 212 RIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRIS----AEEALQHPYF 284 (284)
T ss_pred HHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCC----HHHHhcCCCC
Confidence 332210 0000 01236788999999999999999999 9999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=305.81 Aligned_cols=234 Identities=31% Similarity=0.448 Sum_probs=195.3
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-------------------------ccccccCCeEEEEEec
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-------------------------LNRNKTKTHVCLITDY 723 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-------------------------~~~~~~~~~~~lV~Ey 723 (975)
++|++.+.||.|+||.||+|.+..+++.||+|.+..... .....+..++|+|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 479999999999999999999999999999998864320 1111256788999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
+++++|.+++... .+++..++.++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~----- 152 (274)
T cd06609 81 CGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM----- 152 (274)
T ss_pred eCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccc-----
Confidence 9999999999763 68999999999999999999999999999999999999999999999999986643210
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i 883 (975)
.......|++.|+|||++.+..++.++|||||||++|+|++|..||...+.......+
T Consensus 153 ----------------------~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~ 210 (274)
T cd06609 153 ----------------------SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLI 210 (274)
T ss_pred ----------------------cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHh
Confidence 1123456888999999999988999999999999999999999999887766665555
Q ss_pred HhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCc
Q 002051 884 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936 (975)
Q Consensus 884 ~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~ 936 (975)
............++..+.++|.+||..+|++||| ++++++||||....-
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt----~~~il~~~~~~~~~~ 259 (274)
T cd06609 211 PKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPS----AKELLKHKFIKKAKK 259 (274)
T ss_pred hhcCCCCCcccccCHHHHHHHHHHhhCChhhCcC----HHHHhhChhhcCCCc
Confidence 5443322222227889999999999999999999 999999999987543
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=309.78 Aligned_cols=233 Identities=26% Similarity=0.440 Sum_probs=192.4
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh------------------------ccccccCCeEEEEEec
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM------------------------LNRNKTKTHVCLITDY 723 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~------------------------~~~~~~~~~~~lV~Ey 723 (975)
..+|++++.||+|+||.||++.+..+++.||+|.+..... ........+.|+||||
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence 3589999999999999999999999999999998864321 1112256789999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
++|++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++.......
T Consensus 99 ~~~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~----- 170 (296)
T cd06654 99 LAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ----- 170 (296)
T ss_pred cCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccc-----
Confidence 999999999865 458899999999999999999999999999999999999999999999999885432110
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i 883 (975)
.......|++.|+|||.+.+..++.++|||||||++|+|++|+.||...+.......+
T Consensus 171 ----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~ 228 (296)
T cd06654 171 ----------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 228 (296)
T ss_pred ----------------------cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHH
Confidence 1112346889999999999888899999999999999999999999887765544443
Q ss_pred Hhc-CCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 884 LHK-DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 884 ~~~-~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
... ....+....++..+.+||.+||.++|++||| +.+++.||||...
T Consensus 229 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~eil~~~~~~~~ 276 (296)
T cd06654 229 ATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGS----AKELLQHQFLKIA 276 (296)
T ss_pred hcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcC----HHHHhhChhhhcc
Confidence 332 2222333457788999999999999999999 9999999999754
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-33 Score=307.38 Aligned_cols=237 Identities=26% Similarity=0.438 Sum_probs=195.0
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEEec
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITDY 723 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~Ey 723 (975)
.++|+++++||.|+||.||++.+..+++.||+|.+.... +.........+|+||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 457999999999999999999999999999999975431 11112256788999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
+++++|.+++... ...+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 84 ~~~~~L~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~------ 156 (280)
T cd06611 84 CDGGALDSIMLEL-ERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST------ 156 (280)
T ss_pred cCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccc------
Confidence 9999999998764 246999999999999999999999999999999999999999999999999987543211
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhc-----CCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~ 878 (975)
........|++.|+|||.+. ...++.++|+|||||++|+|++|++||...+...
T Consensus 157 ---------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~ 215 (280)
T cd06611 157 ---------------------LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR 215 (280)
T ss_pred ---------------------ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH
Confidence 01122356899999999985 3446779999999999999999999998887777
Q ss_pred HHHHHHhcCC-CCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCc
Q 002051 879 TFANILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936 (975)
Q Consensus 879 ~~~~i~~~~~-~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~ 936 (975)
.+..+..... .+.....++..+.+||.+||+.+|.+||+ +.++++||||+....
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~~~~~~~~~~ 270 (280)
T cd06611 216 VLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPT----AAELLKHPFVSDQSD 270 (280)
T ss_pred HHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcC----HHHHhcChhhcccch
Confidence 6666655432 22233457889999999999999999999 999999999987643
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-34 Score=333.78 Aligned_cols=233 Identities=29% Similarity=0.429 Sum_probs=187.3
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-------------------------hcc-c-----ccc-
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------------------MLN-R-----NKT- 713 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------------------~~~-~-----~~~- 713 (975)
+...+++|.+.|.+|||+.||+|.+...|..||+|++-... +++ . ...
T Consensus 34 Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~ 113 (738)
T KOG1989|consen 34 VGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG 113 (738)
T ss_pred ECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence 34456789999999999999999999988999999864221 011 0 001
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEEecCCcEEEeeccCC
Q 002051 714 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLTDFDLS 791 (975)
Q Consensus 714 ~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~g--IiHrDIKp~NILl~~~g~vkL~DFG~a 791 (975)
.-.++|+||||.||.|.|+|..+....|++.++.+|+.++|+||.+||..+ |||||||-+||||+.+|++||||||.|
T Consensus 114 ~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 114 VWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred eeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccc
Confidence 346789999999999999998766677999999999999999999999998 999999999999999999999999998
Q ss_pred CccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhh---cCCCCCChhHHHHHHHHHHHHHhCC
Q 002051 792 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII---AGAGHTSAVDWWALGILLYEMLYGY 868 (975)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l---~~~~~~~k~DIWSLG~il~ell~G~ 868 (975)
+.....+. ...... .. .......-|+.|+|||.+ .+.+.+.|+|||+|||+||.|++..
T Consensus 194 tt~~~~~~-----~~~e~~---------~v----e~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t 255 (738)
T KOG1989|consen 194 TTKILSPT-----SAQEVN---------YV----EEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFT 255 (738)
T ss_pred ccccCCCc-----cHHHHH---------HH----HHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhC
Confidence 54322110 000000 00 011123468999999976 6778899999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChh
Q 002051 869 TPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 920 (975)
Q Consensus 869 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~ 920 (975)
.||..... ..|+++.+.+|....++..+++||+.||+.||++||+...
T Consensus 256 ~PFe~sg~----laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Q 303 (738)
T KOG1989|consen 256 TPFEESGK----LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQ 303 (738)
T ss_pred CCcCcCcc----eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHH
Confidence 99987643 3578899999999999999999999999999999999433
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=314.91 Aligned_cols=231 Identities=29% Similarity=0.509 Sum_probs=197.0
Q ss_pred cccccCCceEEEEEEEeCCCeEEEEEEeccchhcccc--------------------------ccCCeEEEEEeccCCCC
Q 002051 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN--------------------------KTKTHVCLITDYCPGGE 728 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~~~--------------------------~~~~~~~lV~Ey~~ggs 728 (975)
+.||.|.||+||-++++.+|+.||||+++|..+.... +....+++|||-+ .|+
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~GD 648 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-HGD 648 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-cch
Confidence 7899999999999999999999999999886533222 2677899999999 667
Q ss_pred HHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC---cEEEeeccCCCccCCCCCCCCCcc
Q 002051 729 LFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSCLTSCKPQLLLPTT 805 (975)
Q Consensus 729 L~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g---~vkL~DFG~a~~~~~~~~~~~~~~ 805 (975)
+...|.....+.+++...+.++.||+.||.|||-+||+|+||||+|||+.... ++||||||+|+.++.+..
T Consensus 649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF------ 722 (888)
T KOG4236|consen 649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF------ 722 (888)
T ss_pred HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhh------
Confidence 77777666678899999999999999999999999999999999999997553 699999999988764322
Q ss_pred hhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q 002051 806 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH 885 (975)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~ 885 (975)
..+.+|||.|+|||+++...|...-|+||+|+|+|--++|..||.. .+++..+|.+
T Consensus 723 ----------------------RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE--dEdIndQIQN 778 (888)
T KOG4236|consen 723 ----------------------RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE--DEDINDQIQN 778 (888)
T ss_pred ----------------------hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCC--ccchhHHhhc
Confidence 2357999999999999999999999999999999999999999954 3456667777
Q ss_pred cCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCC-cchhh
Q 002051 886 KDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN-WALVR 940 (975)
Q Consensus 886 ~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~-~~~~~ 940 (975)
..+-+|.. ..++..++|||..+|+..-.+|.| +++.|.|||+++.. |..++
T Consensus 779 AaFMyPp~PW~eis~~AidlIn~LLqVkm~kRys----vdk~lsh~Wlq~yq~w~DLR 832 (888)
T KOG4236|consen 779 AAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYS----VDKSLSHPWLQDYQTWLDLR 832 (888)
T ss_pred cccccCCCchhhcCHHHHHHHHHHHHHHHHHhcc----hHhhccchhhhcchHHHHHH
Confidence 66666554 458999999999999999999999 99999999998643 44443
|
|
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-33 Score=310.32 Aligned_cols=233 Identities=26% Similarity=0.446 Sum_probs=191.4
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEEec
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITDY 723 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~Ey 723 (975)
.++|++++.||+|+||.||+|.+..+++.||+|.+.... +........++|+||||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 368999999999999999999999999999999886432 11122256789999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
+++++|.+++.+ ..+++..+..++.|++.||.|||+.||+||||||+|||++.++.++|+|||++.......
T Consensus 98 ~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~----- 169 (297)
T cd06656 98 LAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ----- 169 (297)
T ss_pred cCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc-----
Confidence 999999999865 458999999999999999999999999999999999999999999999999885432110
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i 883 (975)
.......+++.|+|||.+.+..++.++|+|||||++|+|++|..||.+.+.......+
T Consensus 170 ----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~ 227 (297)
T cd06656 170 ----------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI 227 (297)
T ss_pred ----------------------cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeee
Confidence 0112346889999999999988999999999999999999999999876654433333
Q ss_pred Hhc-CCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 884 LHK-DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 884 ~~~-~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
... .........++..+.+||.+||..+|++||+ +.++++||||...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~~~~~~~~ 275 (297)
T cd06656 228 ATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGS----AKELLQHPFLKLA 275 (297)
T ss_pred ccCCCCCCCCccccCHHHHHHHHHHccCChhhCcC----HHHHhcCchhccc
Confidence 222 2222233456788999999999999999999 9999999999754
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-33 Score=309.62 Aligned_cols=230 Identities=29% Similarity=0.427 Sum_probs=185.9
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-------------------------hccccccCCeEEEEEec
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------------------MLNRNKTKTHVCLITDY 723 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------------------~~~~~~~~~~~~lV~Ey 723 (975)
++|++.++||+|+||.||++.+..++..+|+|.+.... +........++|+||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 36999999999999999999999999999999875431 11112257789999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~-~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
++|++|.+++.+. ..+++..++.++.||+.||.|||+ ++++|+||||+|||++.++.+||+|||++.....
T Consensus 81 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------ 152 (308)
T cd06615 81 MDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID------ 152 (308)
T ss_pred cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccc------
Confidence 9999999999774 568999999999999999999998 5999999999999999999999999998744211
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 882 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~ 882 (975)
......+|++.|+|||++.+..++.++|+|||||++|+|++|+.||...+.......
T Consensus 153 -----------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~ 209 (308)
T cd06615 153 -----------------------SMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAM 209 (308)
T ss_pred -----------------------cccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHh
Confidence 011245789999999999888899999999999999999999999976553332221
Q ss_pred HHhcCCC----------------------------------CCC--CCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 883 ILHKDLK----------------------------------FPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 883 i~~~~~~----------------------------------~p~--~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
+...... .|. ...++.++.+||.+||..+|++||| +.+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~ll 285 (308)
T cd06615 210 FGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERAD----LKELT 285 (308)
T ss_pred hcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcC----HHHHh
Confidence 1110000 000 1125778999999999999999999 99999
Q ss_pred cCCCccC
Q 002051 927 KHPFFKG 933 (975)
Q Consensus 927 ~Hp~f~~ 933 (975)
.||||.+
T Consensus 286 ~~~~~~~ 292 (308)
T cd06615 286 KHPFIKR 292 (308)
T ss_pred cChhhhh
Confidence 9999975
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=315.47 Aligned_cols=227 Identities=28% Similarity=0.441 Sum_probs=188.2
Q ss_pred ccccCCceEEEEEEEeCCCeEEEEEEeccc------------------------hhccccccCCeEEEEEeccCCCCHHH
Q 002051 676 PLGSGDTGSVHLVELCGSGQYFAMKAMDKG------------------------VMLNRNKTKTHVCLITDYCPGGELFL 731 (975)
Q Consensus 676 ~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~------------------------~~~~~~~~~~~~~lV~Ey~~ggsL~~ 731 (975)
+||+|.||+||-|++..|....|||-+... .++.....++++-|.||-++||+|.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 699999999999999999999999976432 13344457889999999999999999
Q ss_pred HHhhCCCCCC--CHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe-cCCcEEEeeccCCCccCCCCCCCCCcchhh
Q 002051 732 LLDRQPTKVL--KEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFDLSCLTSCKPQLLLPTTNEK 808 (975)
Q Consensus 732 ~l~~~~~~~l--~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~-~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~ 808 (975)
++... =+++ .+..+-.+.+||++||.|||++.|||||||-+|+|++ -.|.+||+|||-++.+..-
T Consensus 662 LLrsk-WGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi----------- 729 (1226)
T KOG4279|consen 662 LLRSK-WGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI----------- 729 (1226)
T ss_pred HHHhc-cCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccC-----------
Confidence 99764 2445 8889999999999999999999999999999999997 5789999999998765421
Q ss_pred hhccCCCCCcccccccccccccccCCCCccchhhhcCC--CCCChhHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHh
Q 002051 809 KRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLYGYTPFRGK-TRQKTFANILH 885 (975)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~--~~~~k~DIWSLG~il~ell~G~~Pf~~~-~~~~~~~~i~~ 885 (975)
.....++.||..|||||++..+ +|+.++|||||||++.||.||++||... ++...+.++--
T Consensus 730 ----------------nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGm 793 (1226)
T KOG4279|consen 730 ----------------NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGM 793 (1226)
T ss_pred ----------------CccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcc
Confidence 1234578899999999999654 5889999999999999999999999753 33333333322
Q ss_pred cCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 886 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 886 ~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
-....|.+..+|.+++.||.+|+.+||.+||+ +++||..||++.-
T Consensus 794 yKvHP~iPeelsaeak~FilrcFepd~~~R~s----A~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 794 YKVHPPIPEELSAEAKNFILRCFEPDPCDRPS----AKDLLQDPFLQHN 838 (1226)
T ss_pred eecCCCCcHHHHHHHHHHHHHHcCCCcccCcc----HHHhccCcccccC
Confidence 23344555568899999999999999999999 9999999999865
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-33 Score=337.82 Aligned_cols=124 Identities=36% Similarity=0.600 Sum_probs=109.8
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLI 720 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV 720 (975)
+++|.++++||+|+||.||+|.+..+++.||||++.+... ........++|||
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 5689999999999999999999999999999999875321 1111256789999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
||||.|++|.+++... +.+++..++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 83 mEy~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 83 MEYLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred EeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 9999999999999764 4689999999999999999999999999999999999999999999999999874
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-33 Score=307.46 Aligned_cols=232 Identities=27% Similarity=0.453 Sum_probs=193.9
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEEecc
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITDYC 724 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~Ey~ 724 (975)
.+|++++.||.|+||.||++.+..+++.||+|.+.... +.........+|+||||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 57999999999999999999999999999999875431 111122567899999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCc
Q 002051 725 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 804 (975)
Q Consensus 725 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~ 804 (975)
++++|..++.. ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.+||+|||++.......
T Consensus 99 ~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~------ 169 (296)
T cd06655 99 AGGSLTDVVTE---TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ------ 169 (296)
T ss_pred CCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhccccc------
Confidence 99999999865 458999999999999999999999999999999999999999999999999885532110
Q ss_pred chhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 002051 805 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANIL 884 (975)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~ 884 (975)
.......|++.|+|||.+.+..++.++|+|||||++|+|++|..||.+.+.......+.
T Consensus 170 ---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~ 228 (296)
T cd06655 170 ---------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA 228 (296)
T ss_pred ---------------------ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 01123468899999999998889999999999999999999999999887766555554
Q ss_pred hcC-CCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 885 HKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 885 ~~~-~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
... ..+.....++..+.+||++||..||.+||| +.+++.||||+..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt----~~~il~~~~~~~~ 275 (296)
T cd06655 229 TNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGS----AKELLQHPFLKLA 275 (296)
T ss_pred hcCCcccCCcccCCHHHHHHHHHHhhcChhhCCC----HHHHhhChHhhhc
Confidence 332 222334457889999999999999999999 9999999999754
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-34 Score=319.80 Aligned_cols=237 Identities=29% Similarity=0.491 Sum_probs=209.3
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVC 718 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~ 718 (975)
....+.|.+++.||+|.|+.|.++++..|+..||||++++... .........+|
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ly 131 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLY 131 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeE
Confidence 4456789999999999999999999999999999999987632 11222678899
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
+||||+.+|.+++++.++ +.+.+..++.++.|++.|++|||+++|||||||++|||++.+.++||+|||++..+...
T Consensus 132 lV~eya~~ge~~~yl~~~--gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~- 208 (596)
T KOG0586|consen 132 LVMEYASGGELFDYLVKH--GRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYG- 208 (596)
T ss_pred EEEEeccCchhHHHHHhc--ccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeeccc-
Confidence 999999999999999987 55888999999999999999999999999999999999999999999999999776532
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCC-CChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
....++||++.|.|||++.+..| ++.+|+||+|+++|-|+.|..||.+.+-.
T Consensus 209 ---------------------------~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk 261 (596)
T KOG0586|consen 209 ---------------------------LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLK 261 (596)
T ss_pred ---------------------------ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccc
Confidence 23357899999999999999887 46899999999999999999999999888
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcc
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 937 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~ 937 (975)
+.....+.+.+..|.. ++.+|.++|+++|..+|.+|++ ++++..|.|.....-.
T Consensus 262 ~Lr~rvl~gk~rIp~~--ms~dce~lLrk~lvl~Pskr~~----~dqim~~~W~n~~~~~ 315 (596)
T KOG0586|consen 262 ELRPRVLRGKYRIPFY--MSCDCEDLLRKFLVLNPSKRGP----CDQIMKDRWRNDLLEA 315 (596)
T ss_pred cccchheeeeecccce--eechhHHHHHHhhccCccccCC----HHHhhhhcccchhhhh
Confidence 8888888888888776 5779999999999999999999 9999999999754433
|
|
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-33 Score=304.13 Aligned_cols=232 Identities=25% Similarity=0.428 Sum_probs=190.3
Q ss_pred cccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEEeccCC
Q 002051 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITDYCPG 726 (975)
Q Consensus 671 y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~Ey~~g 726 (975)
|++++.||.|+||.||++.+..++..+++|.+.... +..........|+||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 788999999999999999999999999999876431 01112256788999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcch
Q 002051 727 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 806 (975)
Q Consensus 727 gsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 806 (975)
++|..++... ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++......
T Consensus 87 ~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~--------- 156 (282)
T cd06643 87 GAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT--------- 156 (282)
T ss_pred CcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccc---------
Confidence 9999887653 356899999999999999999999999999999999999999999999999998543210
Q ss_pred hhhhccCCCCCcccccccccccccccCCCCccchhhhc-----CCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002051 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881 (975)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~ 881 (975)
........|++.|+|||++. +..++.++|||||||++|+|++|.+||...+......
T Consensus 157 ------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~ 218 (282)
T cd06643 157 ------------------IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLL 218 (282)
T ss_pred ------------------ccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHH
Confidence 01122356899999999984 3456789999999999999999999998877766666
Q ss_pred HHHhcCC-CCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 882 NILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 882 ~i~~~~~-~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
.+..... ..+.+..++..+.+||.+||+.||.+||+ +.++++||||+..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~ 268 (282)
T cd06643 219 KIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWT----TTQLLQHPFVTVN 268 (282)
T ss_pred HHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcC----HHHHhcCCCEecc
Confidence 6654432 22333457889999999999999999999 9999999999754
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=287.74 Aligned_cols=242 Identities=25% Similarity=0.345 Sum_probs=190.4
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------------ccccccCC
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------------LNRNKTKT 715 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------------~~~~~~~~ 715 (975)
.++.++|++.+.||.|||+-||+++...++..||+|.+..... ........
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~ 96 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH 96 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence 4678899999999999999999999999999999998754321 11111455
Q ss_pred eEEEEEeccCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEEecCCcEEEeeccCC
Q 002051 716 HVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLTDFDLS 791 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qIl~aL~yLH~~g--IiHrDIKp~NILl~~~g~vkL~DFG~a 791 (975)
..||++.|+..|+|.+.+.. ..+..+++.++..|+.+|+.||++||+.. +.||||||.|||+...+.++|.|||.+
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~ 176 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSA 176 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCc
Confidence 68999999999999999875 33457999999999999999999999998 999999999999999999999999998
Q ss_pred CccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC---CCCChhHHHHHHHHHHHHHhCC
Q 002051 792 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA---GHTSAVDWWALGILLYEMLYGY 868 (975)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~---~~~~k~DIWSLG~il~ell~G~ 868 (975)
+.....-.. ... .........-..|..|+|||.+.-. ..+.++|||||||+||.|++|.
T Consensus 177 ~~a~i~i~~----~~~--------------a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~ 238 (302)
T KOG2345|consen 177 TQAPIQIEG----SRQ--------------ALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGE 238 (302)
T ss_pred cccceEeec----hHH--------------HHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcC
Confidence 664321100 000 0000111223468899999998643 4577999999999999999999
Q ss_pred CCCCCCCH--HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 869 TPFRGKTR--QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 869 ~Pf~~~~~--~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
.||...-. ..+...+.+..+.+|.....|..+.+||+.||+.||.+||+ +.+|+.+
T Consensus 239 sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~----i~~ll~~ 296 (302)
T KOG2345|consen 239 SPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPT----IPELLSK 296 (302)
T ss_pred CcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCC----HHHHHHH
Confidence 99953211 11122344567889988889999999999999999999999 8888754
|
|
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-33 Score=303.05 Aligned_cols=231 Identities=26% Similarity=0.423 Sum_probs=186.5
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEEe
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITD 722 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~E 722 (975)
..++|++++.||+|+||.||+|.+..+++.||+|++.... +.........+|+|||
T Consensus 7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e 86 (267)
T cd06646 7 PQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICME 86 (267)
T ss_pred chhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Confidence 3568999999999999999999999999999999886421 0111125678899999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
|+++++|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++......
T Consensus 87 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~----- 159 (267)
T cd06646 87 YCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITAT----- 159 (267)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeeccc-----
Confidence 99999999998764 56899999999999999999999999999999999999999999999999998654211
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhc---CCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
........|++.|+|||.+. ...++.++|+||+||++|+|++|..||........
T Consensus 160 ----------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~ 217 (267)
T cd06646 160 ----------------------IAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA 217 (267)
T ss_pred ----------------------ccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh
Confidence 01112346889999999884 34477899999999999999999999976654444
Q ss_pred HHHHHhcCCCCCC---CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCC
Q 002051 880 FANILHKDLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930 (975)
Q Consensus 880 ~~~i~~~~~~~p~---~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~ 930 (975)
...+....+..+. ...++..+.+||++||..+|++||| +++||+|+|
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~----~~~il~~l~ 267 (267)
T cd06646 218 LFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPT----AERLLTHLF 267 (267)
T ss_pred heeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcC----HHHHhcCCC
Confidence 3333333333222 2346789999999999999999999 999999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-33 Score=306.17 Aligned_cols=236 Identities=27% Similarity=0.369 Sum_probs=187.3
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEEEEEe
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCLITD 722 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~lV~E 722 (975)
++|++++.||+|+||.||++.++.+|+.||||.++.... .........+|+|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 479999999999999999999999999999998865321 011114667899999
Q ss_pred ccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 723 YCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 723 y~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qIl~aL~yLH~~-gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
|++ ++|.+++... ....+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||++......
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~-- 157 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS-- 157 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccc--
Confidence 995 6888887642 235689999999999999999999997 9999999999999999999999999998543210
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC----CCCCChhHHHHHHHHHHHHHhCCCCCCCC-
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG----AGHTSAVDWWALGILLYEMLYGYTPFRGK- 874 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~----~~~~~k~DIWSLG~il~ell~G~~Pf~~~- 874 (975)
.......|+..|+|||.+.+ ..++.++|+|||||++|+|++|+.||...
T Consensus 158 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 211 (283)
T cd06617 158 --------------------------VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWK 211 (283)
T ss_pred --------------------------cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccc
Confidence 01122457889999998865 44678999999999999999999999653
Q ss_pred CHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcc
Q 002051 875 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 937 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~ 937 (975)
...+.+..+............++.++.+||.+||..+|.+||+ +++++.||||......
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~~~~ 270 (283)
T cd06617 212 TPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPN----YPELLQHPFFELHLSK 270 (283)
T ss_pred cCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcC----HHHHhcCchhhhcccc
Confidence 2334444444332221112347889999999999999999999 9999999999987654
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=302.84 Aligned_cols=230 Identities=26% Similarity=0.435 Sum_probs=184.7
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEEEEEe
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCLITD 722 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~lV~E 722 (975)
++|++++.||+|+||.||+|.++.+++.||+|.+..... ........++|+|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 479999999999999999999999999999998754310 111125668899999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
|++++.|..++... ..+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~---- 154 (286)
T cd07847 81 YCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPG---- 154 (286)
T ss_pred ccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCc----
Confidence 99988888776543 468999999999999999999999999999999999999999999999999986543110
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~ 881 (975)
.......++..|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+...
T Consensus 155 -----------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~ 211 (286)
T cd07847 155 -----------------------DDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLY 211 (286)
T ss_pred -----------------------ccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 01123457889999999876 457889999999999999999999998877655544
Q ss_pred HHHhcC-------------------CCCCC----------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 882 NILHKD-------------------LKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 882 ~i~~~~-------------------~~~p~----------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
.+.... ...+. ...++..+.+||.+||+++|++||| +.|++.||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~eil~~~~f 286 (286)
T cd07847 212 LIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLS----CEELLEHPYF 286 (286)
T ss_pred HHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCC----HHHHhcCCCC
Confidence 432210 01111 1235778999999999999999999 9999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=298.74 Aligned_cols=230 Identities=25% Similarity=0.486 Sum_probs=194.7
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------------------hccccccCCeEEEEEec
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------------------MLNRNKTKTHVCLITDY 723 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------------~~~~~~~~~~~~lV~Ey 723 (975)
+|++.+.||+|+||.||++.+..+|+.||+|.+.... +........+.|+||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 5899999999999999999999999999999876431 11122356789999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
+.+++|.+++.......+++..+..++.|++.||.|||++|++|+||+|+|||++.++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~----- 155 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV----- 155 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch-----
Confidence 999999999976544568999999999999999999999999999999999999999999999999985532110
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i 883 (975)
.......|++.|+|||++.+..++.++|+|||||++|+|++|..||......+....+
T Consensus 156 ----------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~ 213 (256)
T cd08218 156 ----------------------ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKI 213 (256)
T ss_pred ----------------------hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHH
Confidence 0112345788999999999888899999999999999999999999988887777777
Q ss_pred HhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 884 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 884 ~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
..+... +.....+..+.++|.+||+.+|.+||+ +.+++.||||
T Consensus 214 ~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~vl~~~~~ 256 (256)
T cd08218 214 IRGSYP-PVSSHYSYDLRNLVSQLFKRNPRDRPS----VNSILEKNFI 256 (256)
T ss_pred hcCCCC-CCcccCCHHHHHHHHHHhhCChhhCcC----HHHHhhCcCC
Confidence 665533 223457889999999999999999999 9999999998
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-33 Score=300.58 Aligned_cols=236 Identities=27% Similarity=0.421 Sum_probs=193.3
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-------------------------ccccccCCeEEEEEec
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-------------------------LNRNKTKTHVCLITDY 723 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-------------------------~~~~~~~~~~~lV~Ey 723 (975)
++|++.+.||.|+||+||+|....++..+|+|++..... ..........|+||||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 479999999999999999999998999999999864321 1111256788999999
Q ss_pred cCCCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~-~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
++|++|.+++..... ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~-- 158 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDR-- 158 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccc--
Confidence 999999999976422 56899999999999999999999999999999999999999999999999998654321110
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~ 881 (975)
.........|+..|+|||++... .++.++|+|||||++|+|++|+.||...+....+.
T Consensus 159 ---------------------~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~ 217 (267)
T cd06610 159 ---------------------TRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLM 217 (267)
T ss_pred ---------------------cccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHH
Confidence 00112345689999999998776 78889999999999999999999998877766666
Q ss_pred HHHhcCCC-CCCC---CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 882 NILHKDLK-FPSS---TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 882 ~i~~~~~~-~p~~---~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
.+...... ++.. ..++..+.+||.+||..||++||| +.+|+.||||
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~ll~~p~~ 267 (267)
T cd06610 218 LTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPT----AEELLKHKFF 267 (267)
T ss_pred HHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcC----HHHHhhCCCC
Confidence 66554321 1111 256788999999999999999999 9999999998
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=298.85 Aligned_cols=234 Identities=29% Similarity=0.460 Sum_probs=190.5
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------------ccccccCCe
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------------LNRNKTKTH 716 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------------~~~~~~~~~ 716 (975)
+|.+...||.|+||.||+|.+..+++.||+|.+..... ........+
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 47888999999999999999999999999998754211 111125678
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
.|+||||+++++|.+++... ..+++..+..++.|++.||.|||++|++||||+|+||+++.++.++|+|||.++....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEA 158 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccc
Confidence 89999999999999999764 5689999999999999999999999999999999999999999999999999866532
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 876 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~ 876 (975)
.... ...........|+..|+|||.+.+..++.++|+|||||++|+|++|..||...+.
T Consensus 159 ~~~~---------------------~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~ 217 (267)
T cd06628 159 NSLS---------------------TKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ 217 (267)
T ss_pred cccc---------------------CCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH
Confidence 1100 0001112235688999999999988899999999999999999999999988766
Q ss_pred HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 877 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 877 ~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
...+..+.... ........+..+.++|++||+.||.+||+ +.++++||||
T Consensus 218 ~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~ 267 (267)
T cd06628 218 LQAIFKIGENA-SPEIPSNISSEAIDFLEKTFEIDHNKRPT----AAELLKHPFL 267 (267)
T ss_pred HHHHHHHhccC-CCcCCcccCHHHHHHHHHHccCCchhCcC----HHHHhhCCCC
Confidence 55555544422 12222346889999999999999999999 9999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=299.42 Aligned_cols=233 Identities=27% Similarity=0.405 Sum_probs=186.8
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-----------------hc------------ccc--ccCCeE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-----------------ML------------NRN--KTKTHV 717 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-----------------~~------------~~~--~~~~~~ 717 (975)
.+|++.+.||+|+||.||+|.+..+++.||+|.+.... ++ ... .....+
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 36999999999999999999999999999999875321 00 000 124678
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|++|||+++++|.+++... ..+++..++.++.||+.||.|||+++|+||||||+||+++.++.++|+|||++......
T Consensus 82 ~l~~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAY--GALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTI 159 (266)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccc
Confidence 9999999999999999764 45899999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
.. .........++..|+|||++.+..++.++|+|||||++|+|++|+.||......
T Consensus 160 ~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~ 215 (266)
T cd06651 160 CM------------------------SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM 215 (266)
T ss_pred cc------------------------cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH
Confidence 00 000112345889999999999888999999999999999999999999877665
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCcc
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~ 932 (975)
.....+.............+..+.+|| +||..+|++||+ +++|+.||||+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~----~~eil~hp~~~ 265 (266)
T cd06651 216 AAIFKIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPS----AEELLRHPFAQ 265 (266)
T ss_pred HHHHHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcC----HHHHhcCcccc
Confidence 555544433222222334678889999 577789999999 99999999996
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-33 Score=266.47 Aligned_cols=233 Identities=23% Similarity=0.436 Sum_probs=192.7
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------------------hccccccCCeEEEEEe
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------------------MLNRNKTKTHVCLITD 722 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------------~~~~~~~~~~~~lV~E 722 (975)
..|.-.++||+|.||+||+++.+.+++.||+|.++... +.+....++.+-+|+|
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe 81 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence 46788899999999999999999999999999876431 1112225677889999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
|| ..+|..+.... ++.++...++.++.|++.||.|||++++.|||+||.|+||+.+|.+||+|||+++.++..-
T Consensus 82 ~c-dqdlkkyfdsl-ng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipv---- 155 (292)
T KOG0662|consen 82 FC-DQDLKKYFDSL-NGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV---- 155 (292)
T ss_pred Hh-hHHHHHHHHhc-CCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCce----
Confidence 99 77998888764 4679999999999999999999999999999999999999999999999999998776321
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC-CCChhHHHHHHHHHHHHH-hCCCCCCCCCHHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEML-YGYTPFRGKTRQKTF 880 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~~~k~DIWSLG~il~ell-~G~~Pf~~~~~~~~~ 880 (975)
......+-|..|++|.++.|.. |+...|+||.||++.|+. .|++.|.+.+..+++
T Consensus 156 -----------------------rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddql 212 (292)
T KOG0662|consen 156 -----------------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL 212 (292)
T ss_pred -----------------------EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHH
Confidence 1223446799999999998865 788999999999999999 699999999999999
Q ss_pred HHHHhcC-----CCCC------------CC----------CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 881 ANILHKD-----LKFP------------SS----------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 881 ~~i~~~~-----~~~p------------~~----------~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
.+|...- -.+| .. +.++...+++++++|.-+|.+|++ ++..|+||||..
T Consensus 213 krif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qris----aeaalqhpyf~d 288 (292)
T KOG0662|consen 213 KRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRIS----AEAALQHPYFSD 288 (292)
T ss_pred HHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccC----HHHHhcCccccc
Confidence 9887521 0111 11 122334689999999999999999 999999999975
Q ss_pred C
Q 002051 934 V 934 (975)
Q Consensus 934 ~ 934 (975)
.
T Consensus 289 ~ 289 (292)
T KOG0662|consen 289 F 289 (292)
T ss_pred c
Confidence 4
|
|
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=305.87 Aligned_cols=235 Identities=29% Similarity=0.406 Sum_probs=188.8
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc--------------------------ccc--ccCCeEE
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--------------------------NRN--KTKTHVC 718 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~--------------------------~~~--~~~~~~~ 718 (975)
..++|++.+.||.|+||.||+|.+..+|+.||+|.++..... ... .....+|
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 467899999999999999999999999999999988633110 000 0225689
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
+||||+. ++|.+++... ...+++..++.++.||+.||.|||++|++||||||+||+++.++.+||+|||++.......
T Consensus 85 lv~e~~~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~ 162 (309)
T cd07845 85 LVMEYCE-QDLASLLDNM-PTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA 162 (309)
T ss_pred EEEecCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCcc
Confidence 9999995 5898888764 3568999999999999999999999999999999999999999999999999986543110
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
.......+++.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..
T Consensus 163 ---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~ 215 (309)
T cd07845 163 ---------------------------KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEI 215 (309)
T ss_pred ---------------------------CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 01112245788999999876 45788999999999999999999999998887
Q ss_pred HHHHHHHhcC-------------------CCCCC---------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCC
Q 002051 878 KTFANILHKD-------------------LKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 929 (975)
Q Consensus 878 ~~~~~i~~~~-------------------~~~p~---------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp 929 (975)
..+..+.... ...+. ....++.+.+||++||++||.+||| +.+++.||
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t----~~~il~h~ 291 (309)
T cd07845 216 EQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRAT----AEEALESS 291 (309)
T ss_pred HHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcC----HHHHhcCh
Confidence 7777665421 01110 0124788999999999999999999 99999999
Q ss_pred CccCC
Q 002051 930 FFKGV 934 (975)
Q Consensus 930 ~f~~~ 934 (975)
||+..
T Consensus 292 ~f~~~ 296 (309)
T cd07845 292 YFKEK 296 (309)
T ss_pred hhccC
Confidence 99854
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=304.75 Aligned_cols=232 Identities=28% Similarity=0.480 Sum_probs=190.3
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEEecc
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITDYC 724 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~Ey~ 724 (975)
+.|.....||.|+||.||++.+..++..||||.+.... +.......++.|+||||+
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 101 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFL 101 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCC
Confidence 34666778999999999999999999999999875421 111222567899999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCc
Q 002051 725 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 804 (975)
Q Consensus 725 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~ 804 (975)
++++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 102 ~~~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~------- 171 (292)
T cd06658 102 EGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE------- 171 (292)
T ss_pred CCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccc-------
Confidence 99999998864 45899999999999999999999999999999999999999999999999988543211
Q ss_pred chhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 002051 805 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANIL 884 (975)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~ 884 (975)
........|++.|+|||.+.+..++.++|+||||+++|+|++|+.||...+....+..+.
T Consensus 172 --------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~ 231 (292)
T cd06658 172 --------------------VPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIR 231 (292)
T ss_pred --------------------cccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 011223568999999999998889999999999999999999999998877766655544
Q ss_pred hcC-CCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 885 HKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 885 ~~~-~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
... ...+.....+..+.+||.+||..||.+||| ++++++||||...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~il~~~~~~~~ 278 (292)
T cd06658 232 DNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRAT----AQELLQHPFLKLA 278 (292)
T ss_pred hcCCCccccccccCHHHHHHHHHHccCChhHCcC----HHHHhhChhhhcc
Confidence 322 122233456888999999999999999999 9999999999743
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=302.08 Aligned_cols=231 Identities=30% Similarity=0.497 Sum_probs=187.3
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEEEEEec
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCLITDY 723 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~lV~Ey 723 (975)
+|++.+.||.|+||.||+|.+..+|+.||+|++..... .........+|+||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 58999999999999999999999999999999864321 1111256788999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
+ +++|.+++.... ..+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++........
T Consensus 81 ~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~---- 154 (286)
T cd07832 81 M-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP---- 154 (286)
T ss_pred c-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC----
Confidence 9 999999987643 5699999999999999999999999999999999999999999999999999865432110
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 882 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~ 882 (975)
.......|+..|+|||.+.+. .++.++|||||||++|+|++|.+||.+.+....+..
T Consensus 155 ----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~ 212 (286)
T cd07832 155 ----------------------RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAI 212 (286)
T ss_pred ----------------------CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHH
Confidence 112234689999999998654 468899999999999999999999988776666555
Q ss_pred HHhcC-------------------CCCCC---------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCcc
Q 002051 883 ILHKD-------------------LKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932 (975)
Q Consensus 883 i~~~~-------------------~~~p~---------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~ 932 (975)
+.... ..++. ....+..+.+||.+||+++|.+||| ++++|.||||.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~----~~~~l~h~~~~ 286 (286)
T cd07832 213 VFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLS----AAEALRHPYFT 286 (286)
T ss_pred HHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCC----HHHHhhCcCcC
Confidence 44311 01111 1234678999999999999999999 99999999994
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-33 Score=317.49 Aligned_cols=236 Identities=22% Similarity=0.342 Sum_probs=185.9
Q ss_pred cccccCCCcccccccccCCceEEEEEEEeCCC-----eEEEEEEeccch-------------h-------------cccc
Q 002051 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSG-----QYFAMKAMDKGV-------------M-------------LNRN 711 (975)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~-----~~vAiK~l~~~~-------------~-------------~~~~ 711 (975)
.+.+..++|++.+.||+|+||.||+|.+..++ +.||+|+++... + ....
T Consensus 32 ~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~ 111 (374)
T cd05106 32 KWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGAC 111 (374)
T ss_pred cccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEe
Confidence 34566778999999999999999999975543 579999986431 0 0111
Q ss_pred ccCCeEEEEEeccCCCCHHHHHhhCC------------------------------------------------------
Q 002051 712 KTKTHVCLITDYCPGGELFLLLDRQP------------------------------------------------------ 737 (975)
Q Consensus 712 ~~~~~~~lV~Ey~~ggsL~~~l~~~~------------------------------------------------------ 737 (975)
.....+|+|||||++|+|.+++....
T Consensus 112 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (374)
T cd05106 112 THGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSS 191 (374)
T ss_pred cCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccc
Confidence 24567899999999999999986421
Q ss_pred --------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 738 --------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 738 --------------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
...++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 192 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~---- 267 (374)
T cd05106 192 SQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN---- 267 (374)
T ss_pred cccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc----
Confidence 12478888999999999999999999999999999999999999999999999865321100
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFAN 882 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~~ 882 (975)
........+++.|+|||++.+..++.++|||||||++|+|++ |+.||........+..
T Consensus 268 ---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~ 326 (374)
T cd05106 268 ---------------------YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYK 326 (374)
T ss_pred ---------------------eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHH
Confidence 001122345678999999998889999999999999999997 9999987666555556
Q ss_pred HHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 883 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 883 i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
+.......+.....++++.++|.+||+.||.+||| +.+|++
T Consensus 327 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs----~~~l~~ 367 (374)
T cd05106 327 MVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPT----FSQISQ 367 (374)
T ss_pred HHHcccCccCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 66555554445557899999999999999999999 666643
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-33 Score=312.75 Aligned_cols=236 Identities=25% Similarity=0.382 Sum_probs=185.5
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeC-----CCeEEEEEEeccch-------------hcccc--------------
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGV-------------MLNRN-------------- 711 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~-----t~~~vAiK~l~~~~-------------~~~~~-------------- 711 (975)
|+++.++|++.+.||.|+||.||+|.+.. +++.||+|+++... +....
T Consensus 2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~ 81 (337)
T cd05054 2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACT 81 (337)
T ss_pred cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEe
Confidence 45667799999999999999999997543 45789999875321 00000
Q ss_pred ccCCeEEEEEeccCCCCHHHHHhhCCC-----------------------------------------------------
Q 002051 712 KTKTHVCLITDYCPGGELFLLLDRQPT----------------------------------------------------- 738 (975)
Q Consensus 712 ~~~~~~~lV~Ey~~ggsL~~~l~~~~~----------------------------------------------------- 738 (975)
.....+|++|||+++++|.+++.....
T Consensus 82 ~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (337)
T cd05054 82 KPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEE 161 (337)
T ss_pred cCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchh
Confidence 134568899999999999999864321
Q ss_pred ------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhcc
Q 002051 739 ------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRH 812 (975)
Q Consensus 739 ------~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~ 812 (975)
..++...+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++..+......
T Consensus 162 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~------------ 229 (337)
T cd05054 162 GDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY------------ 229 (337)
T ss_pred hhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcch------------
Confidence 25788999999999999999999999999999999999999999999999998654311100
Q ss_pred CCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCC
Q 002051 813 KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFP 891 (975)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~~i~~~~~~~p 891 (975)
.......++..|+|||++.+..++.++|||||||++|+|++ |..||.+....+.+...+.......
T Consensus 230 -------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~ 296 (337)
T cd05054 230 -------------VRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMR 296 (337)
T ss_pred -------------hhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCC
Confidence 01123456778999999999999999999999999999997 9999987655455545544443333
Q ss_pred CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 892 SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 892 ~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
.....+.++.+++.+||+.+|++||+ +.+|++|
T Consensus 297 ~~~~~~~~~~~l~~~cl~~~p~~RPs----~~ell~~ 329 (337)
T cd05054 297 APEYATPEIYSIMLDCWHNNPEDRPT----FSELVEI 329 (337)
T ss_pred CCccCCHHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence 34457789999999999999999999 8888764
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=296.03 Aligned_cols=229 Identities=28% Similarity=0.458 Sum_probs=191.6
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEEEEEec
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCLITDY 723 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~lV~Ey 723 (975)
+|++.+.||.|+||.||+|.+..+++.+|+|.+....+ .........+|+||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 58999999999999999999999999999998865321 1111246788999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC-CcEEEeeccCCCccCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~-g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
+++++|.+++.......+++..+..++.|++.||.|||++|++|+||||+||+++.+ +.+||+|||.+......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~----- 155 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK----- 155 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC-----
Confidence 999999999987555568999999999999999999999999999999999999855 46899999998654311
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 882 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~ 882 (975)
.......|+..|+|||.+.+..++.++|+||||+++|+|++|..||.+.+.......
T Consensus 156 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~ 212 (256)
T cd08220 156 -----------------------SKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLK 212 (256)
T ss_pred -----------------------ccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHH
Confidence 111234688999999999988889999999999999999999999988877666666
Q ss_pred HHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 883 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 883 i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
+...... +....++..+.+++.+||..+|.+||| +.+++.||||
T Consensus 213 ~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~ll~~p~~ 256 (256)
T cd08220 213 IMSGTFA-PISDRYSPDLRQLILSMLNLDPSKRPQ----LSQIMAQPIC 256 (256)
T ss_pred HHhcCCC-CCCCCcCHHHHHHHHHHccCChhhCCC----HHHHhhCCCC
Confidence 6554332 233457889999999999999999999 9999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=297.52 Aligned_cols=233 Identities=26% Similarity=0.385 Sum_probs=187.6
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-----------------hc------------cccc--cCCeE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-----------------ML------------NRNK--TKTHV 717 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-----------------~~------------~~~~--~~~~~ 717 (975)
.+|++.+.||+|+||.||++.+..+++.||||.+.... .+ .... ....+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 47999999999999999999999999999999875211 00 0001 23568
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|+||||++|++|.+++... ..+++..+..++.|++.||.|||+++|+|+||||+|||++.++.++|+|||++......
T Consensus 82 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~ 159 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTI 159 (265)
T ss_pred EEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccc
Confidence 8999999999999999764 45889999999999999999999999999999999999999999999999988653211
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
.. .........|+..|+|||++.+..++.++|+|||||++|+|++|+.||......
T Consensus 160 ~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~ 215 (265)
T cd06652 160 CL------------------------SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM 215 (265)
T ss_pred cc------------------------cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH
Confidence 00 001122346889999999998888999999999999999999999999877665
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCcc
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~ 932 (975)
..+..+.........+...+..+.++|++||. +|++||+ ++++++|||+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~----~~~il~~~~~~ 265 (265)
T cd06652 216 AAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPS----ADELLRHTFVH 265 (265)
T ss_pred HHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCC----HHHHhcCcccC
Confidence 55555443332222334467789999999995 9999999 99999999984
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=302.90 Aligned_cols=234 Identities=27% Similarity=0.370 Sum_probs=188.4
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------c----cc---------c-----ccCCeEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------L----NR---------N-----KTKTHVC 718 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------~----~~---------~-----~~~~~~~ 718 (975)
.++|.+.+.||.|+||.||+|.+..+++.+|+|++..... . .. . .....+|
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~ 100 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLW 100 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeE
Confidence 5789999999999999999999999999999999864210 0 00 0 0124689
Q ss_pred EEEeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 719 LITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
+||||++|++|.+++... ....+++..++.++.|++.||.|||++||+|+||||+||+++.++.+||+|||++.....
T Consensus 101 lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~ 180 (291)
T cd06639 101 LVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTS 180 (291)
T ss_pred EEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccchhccc
Confidence 999999999999988642 235689999999999999999999999999999999999999999999999999855321
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-----CCCChhHHHHHHHHHHHHHhCCCCC
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-----GHTSAVDWWALGILLYEMLYGYTPF 871 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-----~~~~k~DIWSLG~il~ell~G~~Pf 871 (975)
.. .......|+..|+|||++... .++.++|||||||++|+|++|++||
T Consensus 181 ~~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~ 233 (291)
T cd06639 181 TR---------------------------LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPL 233 (291)
T ss_pred cc---------------------------ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCC
Confidence 10 011234688999999998643 2578999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCcc
Q 002051 872 RGKTRQKTFANILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932 (975)
Q Consensus 872 ~~~~~~~~~~~i~~~~~-~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~ 932 (975)
........+..+..... ........+..+.+||.+||+.+|++||+ +.+|++||||+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~il~~~~~~ 291 (291)
T cd06639 234 FDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPS----VTHLLEHPFIK 291 (291)
T ss_pred CCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcC----HHHHhcCcccC
Confidence 88776666655544322 22223346678999999999999999999 99999999995
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=297.37 Aligned_cols=234 Identities=25% Similarity=0.371 Sum_probs=188.4
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------------hccccccCCeEEE
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------------MLNRNKTKTHVCL 719 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------------~~~~~~~~~~~~l 719 (975)
+|++.+.||.|+||.||+|.. .+++.+|+|.+.... +.........+|+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI 79 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence 588999999999999999986 578899999875321 0111125678899
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
||||++|++|.+++.+. ..+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||++........
T Consensus 80 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 157 (265)
T cd06631 80 FMEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGL 157 (265)
T ss_pred EEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccc
Confidence 99999999999999764 4589999999999999999999999999999999999999999999999998865421100
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
. ...........|+..|+|||++.+..++.++|+|||||++|+|++|..||...+....
T Consensus 158 ~---------------------~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~ 216 (265)
T cd06631 158 H---------------------GTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA 216 (265)
T ss_pred c---------------------ccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH
Confidence 0 0001112235689999999999998899999999999999999999999987766555
Q ss_pred HHHHHhcCCCC-CCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 880 FANILHKDLKF-PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 880 ~~~i~~~~~~~-p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
...+....... +....++..+.+||++||..+|.+||+ +.++|.||||
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~~l~~~~~ 265 (265)
T cd06631 217 MFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPS----ALQLLRHDFL 265 (265)
T ss_pred HHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCC----HHHHhcCCCC
Confidence 54444432222 233457889999999999999999999 9999999997
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=306.90 Aligned_cols=229 Identities=24% Similarity=0.400 Sum_probs=170.1
Q ss_pred ccccccCCceEEEEEEEeC--CCeEEEEEEeccchhc----------------------ccc--ccCCeEEEEEeccCCC
Q 002051 674 IKPLGSGDTGSVHLVELCG--SGQYFAMKAMDKGVML----------------------NRN--KTKTHVCLITDYCPGG 727 (975)
Q Consensus 674 ~~~LG~G~fG~Vy~a~~~~--t~~~vAiK~l~~~~~~----------------------~~~--~~~~~~~lV~Ey~~gg 727 (975)
..+||+|+||.||+|+++. ++..||+|.+...... ... ....++|+||||+ ++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~-~~ 84 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYA-EH 84 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeee-CC
Confidence 3589999999999999754 5689999988653210 000 1456789999999 56
Q ss_pred CHHHHHhhC-------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE----ecCCcEEEeeccCCCccCC
Q 002051 728 ELFLLLDRQ-------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL----QGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 728 sL~~~l~~~-------~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl----~~~g~vkL~DFG~a~~~~~ 796 (975)
+|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++....
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~ 164 (317)
T cd07867 85 DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 164 (317)
T ss_pred cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCC
Confidence 888887532 12358899999999999999999999999999999999999 4567899999999966432
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
... .........||+.|+|||++.+. .++.++|||||||++|+|++|.+||....
T Consensus 165 ~~~------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~ 220 (317)
T cd07867 165 PLK------------------------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred Ccc------------------------cccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccccc
Confidence 110 01112345789999999999764 57899999999999999999999997533
Q ss_pred HH---------HHHHHHHhc--------------CCCC----------------------CCCCCCcHHHHHHHHHhccc
Q 002051 876 RQ---------KTFANILHK--------------DLKF----------------------PSSTPTSLHAKQLMYRLLHR 910 (975)
Q Consensus 876 ~~---------~~~~~i~~~--------------~~~~----------------------p~~~~~s~~~~~li~~~L~~ 910 (975)
.. ..+..+... ...+ ......+..+.+||.+||+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~ 300 (317)
T cd07867 221 EDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTM 300 (317)
T ss_pred ccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhcc
Confidence 21 111111110 0000 00112355688999999999
Q ss_pred CccccCCChhhHHHHHcCCCc
Q 002051 911 DPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 911 dP~~R~t~~~~~~elL~Hp~f 931 (975)
||.+||| +.|+|+||||
T Consensus 301 dP~~R~t----~~e~l~hp~f 317 (317)
T cd07867 301 DPTKRIT----SEQALQDPYF 317 (317)
T ss_pred CcccccC----HHHHhcCCCC
Confidence 9999999 9999999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=297.78 Aligned_cols=229 Identities=36% Similarity=0.676 Sum_probs=188.2
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc---------------------------cccccCCeEEEEEe
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML---------------------------NRNKTKTHVCLITD 722 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~---------------------------~~~~~~~~~~lV~E 722 (975)
+|++.+.||.|+||.||+|.+..+++.||+|++.+.... .......++|+|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 589999999999999999999999999999998653211 11125778999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
|+.|++|.+++... ..+++..+..++.||++||.|||++|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~---- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT---- 154 (258)
T ss_pred CCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc----
Confidence 99999999999774 579999999999999999999999999999999999999999999999999885532110
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCH--HHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR--QKTF 880 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~--~~~~ 880 (975)
......|+..|+|||++.+..++.++|+|||||++|+|++|..||...+. ...+
T Consensus 155 ------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~ 210 (258)
T cd05578 155 ------------------------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQI 210 (258)
T ss_pred ------------------------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHH
Confidence 11234678899999999988899999999999999999999999987663 2222
Q ss_pred HHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 881 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 881 ~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
...... .....+...+..+.++|.+||+.||.+||++. +++++.||||
T Consensus 211 ~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~--~~~l~~~~~~ 258 (258)
T cd05578 211 RAKQET-ADVLYPATWSTEAIDAINKLLERDPQKRLGDN--LKDLKNHPYF 258 (258)
T ss_pred HHHhcc-ccccCcccCcHHHHHHHHHHccCChhHcCCcc--HHHHhcCCCC
Confidence 233221 22223344678999999999999999999921 2999999998
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=301.41 Aligned_cols=233 Identities=30% Similarity=0.436 Sum_probs=186.8
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-------------------------hccccccCCeEEEEEec
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------------------MLNRNKTKTHVCLITDY 723 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------------------~~~~~~~~~~~~lV~Ey 723 (975)
++|++++.||.|+||.||+|.+..+++.||+|.+.... +.......+++|+||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 36999999999999999999999999999999876421 01112256789999999
Q ss_pred cCCCCHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 724 CPGGELFLLLDRQ-PTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 724 ~~ggsL~~~l~~~-~~~~l~~~~i~~i~~qIl~aL~yLH~-~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
|+|++|..++... ....+++..+..++.||+.||.|||+ .||+|+||||+|||++.++.+||+|||++......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---- 156 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS---- 156 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC----
Confidence 9999999988752 12368999999999999999999997 59999999999999999999999999988543210
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC------CCChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG------HTSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~------~~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
......|++.|+|||.+.+.. ++.++|||||||++|+|++|+.||....
T Consensus 157 -------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 211 (286)
T cd06622 157 -------------------------LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPET 211 (286)
T ss_pred -------------------------ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcc
Confidence 112345788999999986543 4779999999999999999999997655
Q ss_pred HHHHHHH---HHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCC
Q 002051 876 RQKTFAN---ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935 (975)
Q Consensus 876 ~~~~~~~---i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~ 935 (975)
....... +.... ....+..++.++.+||.+||+.+|++||+ +++++.||||....
T Consensus 212 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~l~~~~~~~~~~ 269 (286)
T cd06622 212 YANIFAQLSAIVDGD-PPTLPSGYSDDAQDFVAKCLNKIPNRRPT----YAQLLEHPWLVKYK 269 (286)
T ss_pred hhhHHHHHHHHhhcC-CCCCCcccCHHHHHHHHHHcccCcccCCC----HHHHhcChhhhhcc
Confidence 4443332 22222 12223347889999999999999999999 99999999997653
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-33 Score=287.21 Aligned_cols=238 Identities=27% Similarity=0.455 Sum_probs=185.2
Q ss_pred CCCcccccccccCCceEEEEEEEeCCC----eEEEEEEeccch----h----------------------cccc-ccCCe
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSG----QYFAMKAMDKGV----M----------------------LNRN-KTKTH 716 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~----~~vAiK~l~~~~----~----------------------~~~~-~~~~~ 716 (975)
...|+++.+||+|.||.||+|..+.++ +.||||.++.+. + .... ..+..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 346999999999999999999766553 379999887652 0 0000 14788
Q ss_pred EEEEEeccCCCCHHHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC----CcEEEeecc
Q 002051 717 VCLITDYCPGGELFLLLDRQ---PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN----GHVSLTDFD 789 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~---~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~----g~vkL~DFG 789 (975)
+++++||. ..+|+.+|+.+ ....++...++.|+.||+.|+.|||++-|+||||||.|||+..+ |.|||+|||
T Consensus 103 v~l~fdYA-EhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlG 181 (438)
T KOG0666|consen 103 VWLLFDYA-EHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLG 181 (438)
T ss_pred EEEEehhh-hhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeeccc
Confidence 99999999 55999998753 22468999999999999999999999999999999999999877 899999999
Q ss_pred CCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCC
Q 002051 790 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGY 868 (975)
Q Consensus 790 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~ 868 (975)
+++.+...-. +.......+-|..|+|||.++|. -|+.+.||||+|||+.||++-.
T Consensus 182 laR~~~~plk------------------------pl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~ 237 (438)
T KOG0666|consen 182 LARLFNNPLK------------------------PLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLE 237 (438)
T ss_pred HHHHhhcccc------------------------ccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccC
Confidence 9988653211 12233456779999999999986 4889999999999999999999
Q ss_pred CCCCCCC---------HHHHHHHHHhc--C---C------CCCCC------------------------CCCcHHHHHHH
Q 002051 869 TPFRGKT---------RQKTFANILHK--D---L------KFPSS------------------------TPTSLHAKQLM 904 (975)
Q Consensus 869 ~Pf~~~~---------~~~~~~~i~~~--~---~------~~p~~------------------------~~~s~~~~~li 904 (975)
+.|.+.. ..+.+.+|.+- . - ..|.. ..-++...+|+
T Consensus 238 PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL 317 (438)
T KOG0666|consen 238 PLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLL 317 (438)
T ss_pred ccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHH
Confidence 9997632 23445555431 0 0 01110 11244577999
Q ss_pred HHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 905 YRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 905 ~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
.+||++||-+|+| ++++|+|+||+.-
T Consensus 318 ~klL~yDP~kRIt----a~qAleh~yF~~d 343 (438)
T KOG0666|consen 318 QKLLTYDPIKRIT----AEQALEHPYFTED 343 (438)
T ss_pred HHHhccCchhhcc----HHHHhcccccccC
Confidence 9999999999999 9999999999865
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=328.08 Aligned_cols=243 Identities=18% Similarity=0.257 Sum_probs=177.8
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCC----CeEEEEEEeccchh--------------------cc-----c-cccC
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGS----GQYFAMKAMDKGVM--------------------LN-----R-NKTK 714 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t----~~~vAiK~l~~~~~--------------------~~-----~-~~~~ 714 (975)
.+..++|.+.+.||+|+||.||+|.+..+ +..||+|.+..... .. . ....
T Consensus 128 ~~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~ 207 (566)
T PLN03225 128 SFKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNERVRRACPNSCADFVYGFLEPVSSKKE 207 (566)
T ss_pred CCccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHHHHHhhchhhHHHHHHhhhcccccccC
Confidence 34577999999999999999999999988 99999998754210 00 0 1345
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCC------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 002051 715 THVCLITDYCPGGELFLLLDRQPTK------------------VLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 776 (975)
Q Consensus 715 ~~~~lV~Ey~~ggsL~~~l~~~~~~------------------~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NIL 776 (975)
..++|||||+.+++|.+++...... ......++.++.||+.||.|||++||+||||||+|||
T Consensus 208 ~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NIL 287 (566)
T PLN03225 208 DEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNII 287 (566)
T ss_pred CceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEE
Confidence 6799999999999999998753211 1123456789999999999999999999999999999
Q ss_pred Eec-CCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC--------
Q 002051 777 LQG-NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-------- 847 (975)
Q Consensus 777 l~~-~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-------- 847 (975)
++. ++.+||+|||+|+.+.... ......++|++.|+|||.+....
T Consensus 288 l~~~~~~~KL~DFGlA~~l~~~~--------------------------~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~ 341 (566)
T PLN03225 288 FSEGSGSFKIIDLGAAADLRVGI--------------------------NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSA 341 (566)
T ss_pred EeCCCCcEEEEeCCCcccccccc--------------------------ccCCcccccCCCccChHHhhccCCCCCCccc
Confidence 985 5799999999996543110 01123467899999999764322
Q ss_pred --------------CCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-cCCCC-------------------CCC
Q 002051 848 --------------HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH-KDLKF-------------------PSS 893 (975)
Q Consensus 848 --------------~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~-~~~~~-------------------p~~ 893 (975)
++.++|||||||+||+|+++..++.. ....+..++. ....+ ...
T Consensus 342 ~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (566)
T PLN03225 342 PVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDS--NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVL 419 (566)
T ss_pred cccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCch--HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhc
Confidence 33467999999999999997766532 2222222221 11100 000
Q ss_pred CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchh
Q 002051 894 TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 939 (975)
Q Consensus 894 ~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~ 939 (975)
...+....+||++||++||.+||| +.++|+||||++.++...
T Consensus 420 d~~~~~~~dLi~~mL~~dP~kR~t----a~e~L~Hpff~~~~~~~~ 461 (566)
T PLN03225 420 DLDGGAGWELLKSMMRFKGRQRIS----AKAALAHPYFDREGLLGL 461 (566)
T ss_pred cccchHHHHHHHHHccCCcccCCC----HHHHhCCcCcCCCCcccc
Confidence 112334568999999999999999 999999999998877643
|
|
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-32 Score=294.30 Aligned_cols=232 Identities=27% Similarity=0.419 Sum_probs=191.3
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh----------------------ccccccCCeEEEEEeccC
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM----------------------LNRNKTKTHVCLITDYCP 725 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~----------------------~~~~~~~~~~~lV~Ey~~ 725 (975)
.++|++.++||.|+||.||+|.+..+++.||+|.+..... ........++|+++||++
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 81 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCG 81 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCC
Confidence 3579999999999999999999999899999999875421 112225678999999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcc
Q 002051 726 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 805 (975)
Q Consensus 726 ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 805 (975)
+++|.+++... ...+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 ~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~------- 153 (256)
T cd06612 82 AGSVSDIMKIT-NKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM------- 153 (256)
T ss_pred CCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCc-------
Confidence 99999998753 3568999999999999999999999999999999999999999999999999986543110
Q ss_pred hhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q 002051 806 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH 885 (975)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~ 885 (975)
.......|+..|+|||++.+..++.++|||||||++|+|++|+.||...........+..
T Consensus 154 --------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~ 213 (256)
T cd06612 154 --------------------AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPN 213 (256)
T ss_pred --------------------cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhcc
Confidence 011234578899999999998899999999999999999999999987766554444333
Q ss_pred cCC-CCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 886 KDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 886 ~~~-~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
... .+.....++..+.+||.+||+.||.+||| +.++|.||||
T Consensus 214 ~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps----~~~il~~~~~ 256 (256)
T cd06612 214 KPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPS----AIQLLQHPFI 256 (256)
T ss_pred CCCCCCCchhhcCHHHHHHHHHHHhcChhhCcC----HHHHhcCCCC
Confidence 211 22223346788999999999999999999 9999999997
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=312.00 Aligned_cols=229 Identities=26% Similarity=0.499 Sum_probs=183.5
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------hc------------ccc------ccCC
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------ML------------NRN------KTKT 715 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------~~------------~~~------~~~~ 715 (975)
.++|++++.||+|+||.||+|.+..+++.||||++.+.. +. ... .+..
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 94 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ 94 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence 568999999999999999999999999999999986421 00 000 1224
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
++|+||||| +++|.+.+... +++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 95 ~~~lv~e~~-~~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 169 (353)
T cd07850 95 DVYLVMELM-DANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 169 (353)
T ss_pred cEEEEEecc-CCCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCC
Confidence 679999999 56898888642 8999999999999999999999999999999999999999999999999986533
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
.. .......|++.|+|||.+.+..++.++|||||||++|+|++|+.||...+
T Consensus 170 ~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~ 221 (353)
T cd07850 170 TS----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTD 221 (353)
T ss_pred CC----------------------------CCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCC
Confidence 11 01123467899999999999999999999999999999999999998776
Q ss_pred HHHHHHHHHhcCCC------------------------------------CCC-----CCCCcHHHHHHHHHhcccCccc
Q 002051 876 RQKTFANILHKDLK------------------------------------FPS-----STPTSLHAKQLMYRLLHRDPKS 914 (975)
Q Consensus 876 ~~~~~~~i~~~~~~------------------------------------~p~-----~~~~s~~~~~li~~~L~~dP~~ 914 (975)
....+..+...... ++. ....+..+.+||.+||++||++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 301 (353)
T cd07850 222 HIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEK 301 (353)
T ss_pred HHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhh
Confidence 55544443321000 000 1123556899999999999999
Q ss_pred cCCChhhHHHHHcCCCccC
Q 002051 915 RLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 915 R~t~~~~~~elL~Hp~f~~ 933 (975)
||| +.|+|.||||+.
T Consensus 302 R~t----~~eiL~~~~~~~ 316 (353)
T cd07850 302 RIS----VDDALQHPYINV 316 (353)
T ss_pred CcC----HHHHhcChhHhh
Confidence 999 999999999983
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=315.01 Aligned_cols=235 Identities=22% Similarity=0.323 Sum_probs=185.1
Q ss_pred ccccCCCcccccccccCCceEEEEEEE-----eCCCeEEEEEEeccchh--------------------------ccccc
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVEL-----CGSGQYFAMKAMDKGVM--------------------------LNRNK 712 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~-----~~t~~~vAiK~l~~~~~--------------------------~~~~~ 712 (975)
+.++.++|++.+.||+|+||.||+|.+ ..++..||+|+++.... .....
T Consensus 30 ~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~ 109 (375)
T cd05104 30 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACT 109 (375)
T ss_pred cccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeec
Confidence 456677899999999999999999974 34677899999864310 01112
Q ss_pred cCCeEEEEEeccCCCCHHHHHhhCC-------------------------------------------------------
Q 002051 713 TKTHVCLITDYCPGGELFLLLDRQP------------------------------------------------------- 737 (975)
Q Consensus 713 ~~~~~~lV~Ey~~ggsL~~~l~~~~------------------------------------------------------- 737 (975)
.....|+|||||+||+|.+++....
T Consensus 110 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 189 (375)
T cd05104 110 VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSV 189 (375)
T ss_pred cCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccc
Confidence 4567899999999999999986421
Q ss_pred ------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 738 ------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 738 ------------------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 269 (375)
T cd05104 190 RSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN 269 (375)
T ss_pred ccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCccc
Confidence 12478888999999999999999999999999999999999999999999999865431110
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK 878 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~ 878 (975)
........++..|+|||++.+..++.++|||||||++|+|++ |..||.......
T Consensus 270 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~ 324 (375)
T cd05104 270 -------------------------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS 324 (375)
T ss_pred -------------------------ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH
Confidence 001122345678999999999999999999999999999997 899998766555
Q ss_pred HHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 879 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 879 ~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
.+.+.+........+...+.++.+||.+||+.||++||| +.+|++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~eil~ 369 (375)
T cd05104 325 KFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPT----FKQIVQ 369 (375)
T ss_pred HHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcC----HHHHHH
Confidence 555555554444444456789999999999999999999 777764
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-32 Score=294.34 Aligned_cols=230 Identities=27% Similarity=0.462 Sum_probs=196.0
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------------------hccccccCCeEEEEEec
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------------------MLNRNKTKTHVCLITDY 723 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------------~~~~~~~~~~~~lV~Ey 723 (975)
+|++++.||.|+||.||.+++..+++.+++|.+.... +.....+...+++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 5899999999999999999999999999999865431 11122256788999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
|++++|.+++.......+++..+..++.|++.||.|||++|++|+||+|+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~----- 155 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY----- 155 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccc-----
Confidence 999999999987545678999999999999999999999999999999999999999999999999986543111
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i 883 (975)
.......|++.|+|||.+.+..++.++|+|||||++|+|++|..||...+..+....+
T Consensus 156 ----------------------~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~ 213 (256)
T cd08221 156 ----------------------SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKI 213 (256)
T ss_pred ----------------------ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 0122356899999999998888899999999999999999999999988888878777
Q ss_pred HhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 884 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 884 ~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
..+.... .....+..+.++|.+||..+|.+||+ +.++++|||+
T Consensus 214 ~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~R~s----~~~ll~~~~l 256 (256)
T cd08221 214 VQGNYTP-VVSVYSSELISLVHSLLQQDPEKRPT----ADEVLDQPLL 256 (256)
T ss_pred HcCCCCC-CccccCHHHHHHHHHHcccCcccCCC----HHHHhhCcCC
Confidence 7665443 23457889999999999999999999 9999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=297.80 Aligned_cols=230 Identities=18% Similarity=0.269 Sum_probs=185.5
Q ss_pred ccCCCcccccccccCCceEEEEEEEe---CCCeEEEEEEeccch-------------------------hccccccCCeE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGV-------------------------MLNRNKTKTHV 717 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~---~t~~~vAiK~l~~~~-------------------------~~~~~~~~~~~ 717 (975)
+..++|++.+.||+|+||.||+|.++ ..+..||+|.++... +........++
T Consensus 2 i~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 81 (266)
T cd05064 2 LDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTM 81 (266)
T ss_pred CchHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCc
Confidence 45668999999999999999999875 356789999876541 01111256789
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|+||||+++|+|.+++... ...+++..++.++.||+.||+|||++|++||||||+|||++.++.++++|||.+......
T Consensus 82 ~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~ 160 (266)
T cd05064 82 MIVTEYMSNGALDSFLRKH-EGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSE 160 (266)
T ss_pred EEEEEeCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCccccccccc
Confidence 9999999999999999764 246899999999999999999999999999999999999999999999999976432110
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 876 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~ 876 (975)
. ........++..|+|||++.+..++.++|||||||++|++++ |..||.+.+.
T Consensus 161 ~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~ 214 (266)
T cd05064 161 A--------------------------IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG 214 (266)
T ss_pred c--------------------------hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCH
Confidence 0 001112345678999999999999999999999999999875 9999998887
Q ss_pred HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 877 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 877 ~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
...+..+... ...+.+..++..+.+++.+||+.+|.+||+ +++|++
T Consensus 215 ~~~~~~~~~~-~~~~~~~~~~~~~~~li~~c~~~~p~~RP~----~~~i~~ 260 (266)
T cd05064 215 QDVIKAVEDG-FRLPAPRNCPNLLHQLMLDCWQKERGERPR----FSQIHS 260 (266)
T ss_pred HHHHHHHHCC-CCCCCCCCCCHHHHHHHHHHcCCCchhCCC----HHHHHH
Confidence 7777666544 344555567889999999999999999999 666653
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=300.48 Aligned_cols=233 Identities=24% Similarity=0.393 Sum_probs=188.3
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCC-----eEEEEEEeccchh-------------------------ccccccCC
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSG-----QYFAMKAMDKGVM-------------------------LNRNKTKT 715 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~-----~~vAiK~l~~~~~-------------------------~~~~~~~~ 715 (975)
+..++|++++.||+|+||.||+|.+...+ +.||+|.+..... ........
T Consensus 2 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~ 81 (283)
T cd05048 2 IPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ 81 (283)
T ss_pred CChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCC
Confidence 34568999999999999999999987655 7899998864310 11112456
Q ss_pred eEEEEEeccCCCCHHHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPT--------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 781 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~--------------~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g 781 (975)
..|++|||+++++|.+++..... ..++...+..++.||+.||.|||++|++|+||||+|||++.++
T Consensus 82 ~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 82 PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGL 161 (283)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCC
Confidence 78999999999999999976321 4578899999999999999999999999999999999999999
Q ss_pred cEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHH
Q 002051 782 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 861 (975)
Q Consensus 782 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il 861 (975)
.++|+|||++....... .........+++.|+|||.+.+..++.++|||||||++
T Consensus 162 ~~~L~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il 216 (283)
T cd05048 162 TVKISDFGLSRDIYSAD-------------------------YYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVL 216 (283)
T ss_pred cEEECCCcceeeccccc-------------------------cccccCCCcccccccCHHHhccCcCchhhhHHHHHHHH
Confidence 99999999986432110 00112234568899999999888899999999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 862 YEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 862 ~ell~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
|+|++ |..||.+.+..+....+..... .+....++.++.+|+.+||+.||.+||+ +.+|+++
T Consensus 217 ~el~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~l~~~c~~~~p~~Rp~----~~~i~~~ 279 (283)
T cd05048 217 WEIFSYGLQPYYGFSNQEVIEMIRSRQL-LPCPEDCPARVYALMIECWNEIPARRPR----FKDIHTR 279 (283)
T ss_pred HHHHcCCCCCCCCCCHHHHHHHHHcCCc-CCCcccCCHHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence 99997 9999998888777766655432 3334567899999999999999999999 8888754
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=298.53 Aligned_cols=231 Identities=28% Similarity=0.433 Sum_probs=188.7
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-------------------------ccccccCCeEEEEEec
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-------------------------LNRNKTKTHVCLITDY 723 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-------------------------~~~~~~~~~~~lV~Ey 723 (975)
++|++.+.||.|+||.||+|.++.+++.+|+|.+..... .........+|+|+||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 468999999999999999999999999999998765421 1111256789999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~-~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
+++++|.+++.... ..+++..+..++.||+.||.|||+ .|++|+||||+||+++.++.++|+|||.+......
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~----- 154 (265)
T cd06605 81 MDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS----- 154 (265)
T ss_pred cCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHH-----
Confidence 99999999997642 578999999999999999999999 99999999999999999999999999987543210
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCC-----CHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK-----TRQ 877 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~-----~~~ 877 (975)
......++..|+|||.+.+..++.++|||||||++|+|++|..||... ...
T Consensus 155 ------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~ 210 (265)
T cd06605 155 ------------------------LAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIF 210 (265)
T ss_pred ------------------------HhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHH
Confidence 011156888999999999999999999999999999999999999654 233
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
..+..+............++..+.+||.+||..||.+||| +.+++.||||+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~ll~~~~~~~ 262 (265)
T cd06605 211 ELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPS----YKELLEHPFIKK 262 (265)
T ss_pred HHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcC----HHHHhhCchhhc
Confidence 3444444332211111227889999999999999999999 999999999975
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-32 Score=295.25 Aligned_cols=232 Identities=23% Similarity=0.327 Sum_probs=189.2
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------ccccccCCeEEEEE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------~~~~~~~~~~~lV~ 721 (975)
.+...+|.+.++||.|+||.||+|.++.+++.||+|++..... .........+|+||
T Consensus 2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (263)
T cd05052 2 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 81 (263)
T ss_pred CCchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEE
Confidence 3556679999999999999999999999999999999865421 11112566789999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
||+++++|.+++.......+++..++.++.|++.||.|||++|++||||||+|||++.++.+||+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~--- 158 (263)
T cd05052 82 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--- 158 (263)
T ss_pred EeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccce---
Confidence 99999999999976555568999999999999999999999999999999999999999999999999986543110
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTF 880 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~ 880 (975)
........++..|+|||.+.+..++.++|||||||++|+|++ |..||.+.+..+..
T Consensus 159 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~ 215 (263)
T cd05052 159 -----------------------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 215 (263)
T ss_pred -----------------------eeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 001112234667999999999899999999999999999998 99999887776666
Q ss_pred HHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 881 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 881 ~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
..+.. ....+....++..+.++|.+||+.||++||| +.++++
T Consensus 216 ~~~~~-~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~~l~~ 257 (263)
T cd05052 216 ELLEK-GYRMERPEGCPPKVYELMRACWQWNPSDRPS----FAEIHQ 257 (263)
T ss_pred HHHHC-CCCCCCCCCCCHHHHHHHHHHccCCcccCCC----HHHHHH
Confidence 55544 3334444567899999999999999999999 666653
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-32 Score=299.54 Aligned_cols=230 Identities=27% Similarity=0.476 Sum_probs=185.7
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------------------hccccccCCeEEEEEec
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------------------MLNRNKTKTHVCLITDY 723 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------------~~~~~~~~~~~~lV~Ey 723 (975)
+|++++.||.|+||.||+|++..+++.||||.+.... +.....+..+.|+||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4889999999999999999999999999999886431 11122266789999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
+. ++|..++.......+++..++.++.||+.||+|||++|++|+||+|+||+++.++.+||+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~----- 154 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV----- 154 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc-----
Confidence 95 689999877656679999999999999999999999999999999999999999999999999985432110
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC-CCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 882 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~ 882 (975)
.......+++.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+....+.+
T Consensus 155 ----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~ 212 (284)
T cd07860 155 ----------------------RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 212 (284)
T ss_pred ----------------------cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 0112235688999999887644 57899999999999999999999988776655544
Q ss_pred HHhcCC------------------CCCC---------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 883 ILHKDL------------------KFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 883 i~~~~~------------------~~p~---------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
+..... .++. ...++..++++|.+||+.||.+||| +++++.||||
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~~l~~~~f 284 (284)
T cd07860 213 IFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRIS----AKAALAHPFF 284 (284)
T ss_pred HHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCC----HHHHhcCCCC
Confidence 433110 0010 1236778999999999999999999 9999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=300.82 Aligned_cols=234 Identities=25% Similarity=0.363 Sum_probs=186.9
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch---------------hccc--------------cccCCeE
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV---------------MLNR--------------NKTKTHV 717 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~---------------~~~~--------------~~~~~~~ 717 (975)
..++|++++.||+|+||.||+|.+..+++.||+|++.... +... .....++
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~ 95 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQL 95 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeE
Confidence 4678999999999999999999999999999999875421 0000 0134578
Q ss_pred EEEEeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 718 CLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
|+||||++|++|.+++... ....+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||++....
T Consensus 96 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~ 175 (286)
T cd06638 96 WLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLT 175 (286)
T ss_pred EEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCceeecc
Confidence 9999999999999987632 23568999999999999999999999999999999999999999999999999986542
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-----CCCCChhHHHHHHHHHHHHHhCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTP 870 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~~~k~DIWSLG~il~ell~G~~P 870 (975)
... .......|++.|+|||++.. ..++.++|||||||++|+|++|+.|
T Consensus 176 ~~~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p 228 (286)
T cd06638 176 STR---------------------------LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPP 228 (286)
T ss_pred cCC---------------------------CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCC
Confidence 110 01123468999999999853 4478899999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 871 FRGKTRQKTFANILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 871 f~~~~~~~~~~~i~~~~~-~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
|........+..+..... ........+..+.+||.+||+.||++||| +.+|+.|+||
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~ell~~~~~ 286 (286)
T cd06638 229 LADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPT----VSDLLQHVFI 286 (286)
T ss_pred CCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCC----HHHHhhcccC
Confidence 987765554444333211 12222335778999999999999999999 9999999997
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-32 Score=295.27 Aligned_cols=227 Identities=26% Similarity=0.488 Sum_probs=190.2
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-------------------------hccccccCCeEEEEEecc
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------------------MLNRNKTKTHVCLITDYC 724 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------------------~~~~~~~~~~~~lV~Ey~ 724 (975)
+|++.+.||.|+||.||++.+..+++.||+|.++... +........++|+||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 5889999999999999999999999999999875321 011122667899999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCc
Q 002051 725 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 804 (975)
Q Consensus 725 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~ 804 (975)
++++|.+++.......+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||.+......
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~------- 153 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP------- 153 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccc-------
Confidence 9999999987655567899999999999999999999999999999999999999999999999988553211
Q ss_pred chhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 002051 805 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANIL 884 (975)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~ 884 (975)
........|++.|+|||++.+..++.++|+||||+++|+|++|..||...+.......+.
T Consensus 154 --------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~ 213 (255)
T cd08219 154 --------------------GAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVC 213 (255)
T ss_pred --------------------ccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHh
Confidence 011223568899999999998889999999999999999999999999888777776666
Q ss_pred hcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 885 HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 885 ~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
..... +.+..++..+.+||.+||+.||++||| +.+|+.-
T Consensus 214 ~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rp~----~~~il~~ 252 (255)
T cd08219 214 QGSYK-PLPSHYSYELRSLIKQMFKRNPRSRPS----ATTILSR 252 (255)
T ss_pred cCCCC-CCCcccCHHHHHHHHHHHhCCcccCCC----HHHHhhc
Confidence 55433 233457888999999999999999999 8888753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=298.53 Aligned_cols=233 Identities=28% Similarity=0.422 Sum_probs=188.4
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------cccc-------------------ccCCeE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------LNRN-------------------KTKTHV 717 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------~~~~-------------------~~~~~~ 717 (975)
.++|++.+.||.|+||.||+|.++.+++.|++|++..... +... ....++
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQL 84 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEE
Confidence 4689999999999999999999999999999999764310 1100 013458
Q ss_pred EEEEeccCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 718 CLITDYCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~--~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
|+||||+++++|.+++.... ...+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||.+....
T Consensus 85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~ 164 (275)
T cd06608 85 WLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLD 164 (275)
T ss_pred EEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccceecc
Confidence 99999999999999987532 4578999999999999999999999999999999999999999999999999885432
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-----CCCCChhHHHHHHHHHHHHHhCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTP 870 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~~~k~DIWSLG~il~ell~G~~P 870 (975)
.. ........|++.|+|||.+.. ..++.++|||||||++|+|++|..|
T Consensus 165 ~~---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p 217 (275)
T cd06608 165 ST---------------------------LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPP 217 (275)
T ss_pred cc---------------------------hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCC
Confidence 11 011223468999999999854 3467789999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 871 FRGKTRQKTFANILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 871 f~~~~~~~~~~~i~~~~~-~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
|........+..+..... .......++..+.+||.+||..||++||| +.+++.|||+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt----~~~ll~~~~~ 275 (275)
T cd06608 218 LCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPF----MEELLEHPFI 275 (275)
T ss_pred ccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcC----HHHHhcCCCC
Confidence 987666666666554432 22222336788999999999999999999 9999999996
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=300.97 Aligned_cols=233 Identities=26% Similarity=0.413 Sum_probs=188.9
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-------------------------ccccccCCeEEEE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-------------------------LNRNKTKTHVCLI 720 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-------------------------~~~~~~~~~~~lV 720 (975)
+..++|++++.||+|+||+||++.+..+++.||+|++..... ........++|+|
T Consensus 2 l~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (284)
T cd06620 2 LRNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMC 81 (284)
T ss_pred ccHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEE
Confidence 456789999999999999999999999999999998754310 1111256789999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~-~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
|||+++++|.+++.+. +.+++..+..++.|++.||.|||+ .+++|+||||+||+++.++.++|+|||++......
T Consensus 82 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~-- 157 (284)
T cd06620 82 MEFMDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS-- 157 (284)
T ss_pred EecCCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh--
Confidence 9999999999998764 468999999999999999999997 69999999999999999999999999987442110
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHH--
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ-- 877 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~-- 877 (975)
.....+|+..|+|||++.+..++.++|||||||++|+|++|..||......
T Consensus 158 ---------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~ 210 (284)
T cd06620 158 ---------------------------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDD 210 (284)
T ss_pred ---------------------------ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhh
Confidence 112356899999999998888999999999999999999999999865432
Q ss_pred ---------HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 878 ---------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 878 ---------~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
+.+..+............++..+.+||.+||++||++||| +.|+++|+||..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt----~~e~~~~~~~~~ 271 (284)
T cd06620 211 GQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPT----PQQLCAMPPFIQ 271 (284)
T ss_pred hhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcC----HHHHhcCccccc
Confidence 2233333322221112236778999999999999999999 999999999964
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-32 Score=299.84 Aligned_cols=232 Identities=23% Similarity=0.405 Sum_probs=182.7
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------c----c---------ccccC-----Ce
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------L----N---------RNKTK-----TH 716 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------~----~---------~~~~~-----~~ 716 (975)
++|++.+.||.|+||.||+|.+..+++.||+|.+..... + . ..... ..
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 469999999999999999999999999999998754310 0 0 00011 23
Q ss_pred EEEEEeccCCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-CCcEEEeeccCCC
Q 002051 717 VCLITDYCPGGELFLLLDRQP---TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSC 792 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~---~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~-~g~vkL~DFG~a~ 792 (975)
+|+||||+++ +|.+++.... ...+++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+|||++.
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~ 159 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGR 159 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccce
Confidence 7999999965 8988886532 246899999999999999999999999999999999999998 8899999999986
Q ss_pred ccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCC
Q 002051 793 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPF 871 (975)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf 871 (975)
.+.... .......+++.|+|||++.+ ..++.++|||||||++|+|++|..||
T Consensus 160 ~~~~~~---------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~ 212 (295)
T cd07837 160 AFSIPV---------------------------KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLF 212 (295)
T ss_pred ecCCCc---------------------------cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCC
Confidence 432110 01112356888999998865 45788999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCC-----C------------CCC---------CCCCcHHHHHHHHHhcccCccccCCChhhHHHH
Q 002051 872 RGKTRQKTFANILHKDL-----K------------FPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 925 (975)
Q Consensus 872 ~~~~~~~~~~~i~~~~~-----~------------~p~---------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~el 925 (975)
.+.+....+..+..... . .+. ...++..+.+||.+||.+||.+||+ +.++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~----~~ei 288 (295)
T cd07837 213 PGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRIS----AKAA 288 (295)
T ss_pred CCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCC----HHHH
Confidence 98777666555443100 0 000 1246788999999999999999999 9999
Q ss_pred HcCCCcc
Q 002051 926 KKHPFFK 932 (975)
Q Consensus 926 L~Hp~f~ 932 (975)
+.||||+
T Consensus 289 l~~~~~~ 295 (295)
T cd07837 289 LTHPYFD 295 (295)
T ss_pred hcCCCcC
Confidence 9999995
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-32 Score=295.50 Aligned_cols=234 Identities=24% Similarity=0.399 Sum_probs=187.3
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------------hccccccCCeEEE
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------------MLNRNKTKTHVCL 719 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------------~~~~~~~~~~~~l 719 (975)
+|+..+.||+|+||.||++.+..+++.||+|++.... +........++++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 4888899999999999999999999999999986421 0111125678999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC-cEEEeeccCCCccCCCC
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g-~vkL~DFG~a~~~~~~~ 798 (975)
||||++|++|.+++... ..+++..+..++.||+.||.|||++|++|+||||+||+++.++ .++|+|||.+.......
T Consensus 81 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~ 158 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKG 158 (268)
T ss_pred EEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccc
Confidence 99999999999999764 5689999999999999999999999999999999999998776 59999999986543210
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~ 878 (975)
. ..........|+..|+|||.+.+..++.++|+|||||++|+|++|..||.......
T Consensus 159 ~-----------------------~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~ 215 (268)
T cd06630 159 T-----------------------GAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSN 215 (268)
T ss_pred c-----------------------cCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcc
Confidence 0 00011234568999999999998889999999999999999999999997544322
Q ss_pred ---HHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCcc
Q 002051 879 ---TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932 (975)
Q Consensus 879 ---~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~ 932 (975)
....+.........+...+..+.+++.+||..+|.+||+ +.++++||||+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~----~~~ll~~~~~~ 268 (268)
T cd06630 216 HLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPP----SRELLKHPVFR 268 (268)
T ss_pred hHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcC----HHHHhcCcccC
Confidence 222222222222333457789999999999999999999 99999999985
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-32 Score=307.47 Aligned_cols=235 Identities=26% Similarity=0.440 Sum_probs=183.4
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch---h----------cc-----------------ccccCCeE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV---M----------LN-----------------RNKTKTHV 717 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~---~----------~~-----------------~~~~~~~~ 717 (975)
.++|++.+.||+|+||.||+|.+..+|+.||+|.+.... . +. ......++
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 368999999999999999999999999999999875311 0 00 00122468
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|+||||+ +++|..++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 84 ~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 159 (336)
T cd07849 84 YIVQELM-ETDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPE 159 (336)
T ss_pred EEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecccc
Confidence 9999999 5689888854 46999999999999999999999999999999999999999999999999998654321
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 876 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~ 876 (975)
.. .........|++.|+|||.+.+ ..++.++|||||||++|+|++|++||.+.+.
T Consensus 160 ~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~ 215 (336)
T cd07849 160 HD------------------------HTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDY 215 (336)
T ss_pred cc------------------------ccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 10 0011123578999999998755 4688899999999999999999999987655
Q ss_pred HHHHHHHHhcC----------------------CCC----C---CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 877 QKTFANILHKD----------------------LKF----P---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 877 ~~~~~~i~~~~----------------------~~~----p---~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
...+..+.... ... + .....+..+.+||.+||+.+|.+||| +.+++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt----~~e~l~ 291 (336)
T cd07849 216 LHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRIT----VEEALA 291 (336)
T ss_pred HHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcC----HHHHhc
Confidence 44333222100 000 0 01235678999999999999999999 999999
Q ss_pred CCCccCC
Q 002051 928 HPFFKGV 934 (975)
Q Consensus 928 Hp~f~~~ 934 (975)
||||+..
T Consensus 292 hp~~~~~ 298 (336)
T cd07849 292 HPYLEQY 298 (336)
T ss_pred Ccccccc
Confidence 9999966
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-32 Score=297.62 Aligned_cols=226 Identities=27% Similarity=0.476 Sum_probs=181.3
Q ss_pred cccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccC--CeEEEEEe
Q 002051 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTK--THVCLITD 722 (975)
Q Consensus 671 y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~--~~~~lV~E 722 (975)
|+++++||.|+||.||+|.+..+++.||+|.+++... .....+. .++|+|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 7789999999999999999999999999998865310 0011133 78899999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
|++ ++|.+++... ...+++..++.++.||+.||.|||++|++||||||+||+++. +.+||+|||++......
T Consensus 81 ~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~----- 152 (282)
T cd07831 81 LMD-MNLYELIKGR-KRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSK----- 152 (282)
T ss_pred cCC-ccHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccC-----
Confidence 995 5888888653 246899999999999999999999999999999999999999 99999999998654211
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~ 881 (975)
.......+++.|+|||++.. ..++.++|||||||++|+|++|.+||.+.+..+.+.
T Consensus 153 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~ 209 (282)
T cd07831 153 -----------------------PPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIA 209 (282)
T ss_pred -----------------------CCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHH
Confidence 01122457889999998754 456889999999999999999999998877766555
Q ss_pred HHHhc------------------CCCCCC---------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 882 NILHK------------------DLKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 882 ~i~~~------------------~~~~p~---------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
.+... ...++. ....+..+.+||.+||.++|++||| +++++.||||
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~----~~~~l~~~~~ 282 (282)
T cd07831 210 KIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERIT----AKQALRHPYF 282 (282)
T ss_pred HHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccC----HHHHhhCCCC
Confidence 44321 111111 1245789999999999999999999 9999999998
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-32 Score=299.98 Aligned_cols=235 Identities=23% Similarity=0.379 Sum_probs=187.6
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEEEEEe
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCLITD 722 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~lV~E 722 (975)
++|++.+.||.|+||.||+|.++.+|+.||+|.+..... ........++|+|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 579999999999999999999999999999998754311 111125678999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-CCcEEEeeccCCCccCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~-~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
|+ +++|.+++.......+++..++.++.||+.||+|||++|++|+||+|+||+++. ++.+||+|||++.......
T Consensus 82 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~--- 157 (294)
T PLN00009 82 YL-DLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV--- 157 (294)
T ss_pred cc-cccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc---
Confidence 99 568988887655555789999999999999999999999999999999999985 5579999999985432110
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~ 880 (975)
.......+++.|+|||++.+ ..++.++|||||||++|+|++|.+||...+..+.+
T Consensus 158 ------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~ 213 (294)
T PLN00009 158 ------------------------RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDEL 213 (294)
T ss_pred ------------------------cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 01123357889999999876 45788999999999999999999999887776665
Q ss_pred HHHHhcCC---------------------CCCC------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 881 ANILHKDL---------------------KFPS------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 881 ~~i~~~~~---------------------~~p~------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
.++..... .++. ....+..+.+++.+||+.+|++||+ +.+++.||||.+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps----~~~~l~~~~~~~ 289 (294)
T PLN00009 214 FKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRIT----ARAALEHEYFKD 289 (294)
T ss_pred HHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcC----HHHHhcCchHhH
Confidence 55432100 0000 1246788999999999999999999 999999999987
Q ss_pred CC
Q 002051 934 VN 935 (975)
Q Consensus 934 ~~ 935 (975)
++
T Consensus 290 ~~ 291 (294)
T PLN00009 290 LG 291 (294)
T ss_pred Hh
Confidence 64
|
|
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-32 Score=299.08 Aligned_cols=245 Identities=43% Similarity=0.758 Sum_probs=192.8
Q ss_pred CcccccccccCCceEEEEEEEe---CCCeEEEEEEeccchhc-----------------------------cccccCCeE
Q 002051 670 HFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-----------------------------NRNKTKTHV 717 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~---~t~~~vAiK~l~~~~~~-----------------------------~~~~~~~~~ 717 (975)
+|++.+.||.|+||.||++.+. .+++.||||++.+.... ........+
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4889999999999999999864 46789999998643211 111245678
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|+||||+.+++|.+++... ..+++..++.++.|++.||.|||+.|++||||||+||+++.++.++|+|||++..+...
T Consensus 81 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 158 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE 158 (288)
T ss_pred EEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccc
Confidence 9999999999999998764 46899999999999999999999999999999999999999999999999998553211
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC--CCChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--HTSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~--~~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
. ........|+..|++||.+.+.. ++.++|+||||+++|+|++|..||....
T Consensus 159 ~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~ 212 (288)
T cd05583 159 E--------------------------EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDG 212 (288)
T ss_pred c--------------------------ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCc
Confidence 0 01112346889999999987654 6789999999999999999999996432
Q ss_pred ----HHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhccCCC
Q 002051 876 ----RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPP 945 (975)
Q Consensus 876 ----~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~~~~~ 945 (975)
.......+..... +....++..+.++|.+||+.||++|||+. .+.++|+||||++++|..+-..+.+
T Consensus 213 ~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~R~t~~-~~~~~l~~~~~~~~~~~~~~~~~~~ 283 (288)
T cd05583 213 EQNSQSEISRRILKSKP--PFPKTMSAEARDFIQKLLEKDPKKRLGAN-GADEIKNHPFFQGIDWDDLAAKRIP 283 (288)
T ss_pred ccchHHHHHHHHHccCC--CCCcccCHHHHHHHHHHhcCCHhhccCcc-hHHHHhcCcccccCCHHHHhhhccC
Confidence 2233333433333 33344678999999999999999999843 4678899999999999876544444
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-32 Score=294.22 Aligned_cols=231 Identities=28% Similarity=0.452 Sum_probs=190.8
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEEec
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITDY 723 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~Ey 723 (975)
.++|++.+.||.|+||.||+|.+..+++.+|+|++.... +.........+|++|||
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 468999999999999999999999999999999876431 01112256789999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
+++++|.+++... ...+++..+..++.|++.||.|||++||+|+||||+||+++.++.+||+|||.+......
T Consensus 82 ~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~------ 154 (262)
T cd06613 82 CGGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT------ 154 (262)
T ss_pred CCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhh------
Confidence 9999999998763 256899999999999999999999999999999999999999999999999998553211
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC---CCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA---GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~---~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~ 880 (975)
........++..|+|||.+.+. .++.++|+|||||++|+|++|..||...+.....
T Consensus 155 ---------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~ 213 (262)
T cd06613 155 ---------------------IAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRAL 213 (262)
T ss_pred ---------------------hhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 0112235688899999999776 7889999999999999999999999887766666
Q ss_pred HHHHhcCCCCCC---CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCC
Q 002051 881 ANILHKDLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930 (975)
Q Consensus 881 ~~i~~~~~~~p~---~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~ 930 (975)
..+....+..+. ....+..+.+||.+||..+|.+||| +.+++.|+|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~il~~~~ 262 (262)
T cd06613 214 FLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPT----ATKLLQHPF 262 (262)
T ss_pred HHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCC----HHHHhcCCC
Confidence 555544332221 2335678999999999999999999 999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-32 Score=299.03 Aligned_cols=231 Identities=28% Similarity=0.484 Sum_probs=181.7
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-------------------------hccccccCCeEEEEEe
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------------------MLNRNKTKTHVCLITD 722 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------------------~~~~~~~~~~~~lV~E 722 (975)
.++|++.+.||.|+||.||+|.++.+++.||||.+.... +........+.|+|||
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence 468999999999999999999999999999999875431 1112236678999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
|+. ++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 84 ~~~-~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~---- 157 (291)
T cd07844 84 YLD-TDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPS---- 157 (291)
T ss_pred cCC-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCC----
Confidence 996 59999887643 368999999999999999999999999999999999999999999999999885432110
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCCC-HHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKT-RQKTF 880 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~~-~~~~~ 880 (975)
.......++..|+|||++.+ ..++.++||||+||++|+|++|..||.+.. ..+.+
T Consensus 158 -----------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~ 214 (291)
T cd07844 158 -----------------------KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQL 214 (291)
T ss_pred -----------------------ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHH
Confidence 01112346788999999876 457889999999999999999999997655 33333
Q ss_pred HHHHhc-------------------CCCCCC---------CCCCc--HHHHHHHHHhcccCccccCCChhhHHHHHcCCC
Q 002051 881 ANILHK-------------------DLKFPS---------STPTS--LHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930 (975)
Q Consensus 881 ~~i~~~-------------------~~~~p~---------~~~~s--~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~ 930 (975)
..+.+. ...++. ...++ ..+.++|.+||+++|.+||| +.+++.|||
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps----~~e~l~~~~ 290 (291)
T cd07844 215 HKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRIS----AAEAMKHPY 290 (291)
T ss_pred HHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccC----HHHHhcCCC
Confidence 322210 000000 01233 78899999999999999999 999999999
Q ss_pred c
Q 002051 931 F 931 (975)
Q Consensus 931 f 931 (975)
|
T Consensus 291 f 291 (291)
T cd07844 291 F 291 (291)
T ss_pred C
Confidence 8
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-32 Score=294.66 Aligned_cols=230 Identities=21% Similarity=0.345 Sum_probs=187.9
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------ccccccCCeEEEEE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------~~~~~~~~~~~lV~ 721 (975)
.+..++|+++++||+|+||.||+|.+. +++.||+|.+..... ..........|+||
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05072 2 EIPRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 80 (261)
T ss_pred cCchHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEE
Confidence 466789999999999999999999874 567799998764311 11122567789999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
||+++++|.+++.......++...+..++.||+.||.|||+++++||||||+||+++.++.++|+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~--- 157 (261)
T cd05072 81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE--- 157 (261)
T ss_pred ecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCc---
Confidence 99999999999987655678999999999999999999999999999999999999999999999999986543110
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTF 880 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~ 880 (975)
........++..|+|||++.+..++.++|||||||++|+|++ |..||.+.......
T Consensus 158 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~ 214 (261)
T cd05072 158 -----------------------YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVM 214 (261)
T ss_pred -----------------------eeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHH
Confidence 001112345678999999998889999999999999999998 99999887777766
Q ss_pred HHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 881 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 881 ~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
..+... ...+....++..+.+++.+||..+|++||+ +++++
T Consensus 215 ~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~i~ 255 (261)
T cd05072 215 SALQRG-YRMPRMENCPDELYDIMKTCWKEKAEERPT----FDYLQ 255 (261)
T ss_pred HHHHcC-CCCCCCCCCCHHHHHHHHHHccCCcccCcC----HHHHH
Confidence 665543 344555567889999999999999999999 66664
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-32 Score=299.03 Aligned_cols=224 Identities=19% Similarity=0.217 Sum_probs=184.1
Q ss_pred ccCCCcccc--cccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------cccc----c
Q 002051 666 INLQHFRPI--KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRN----K 712 (975)
Q Consensus 666 i~~~~y~i~--~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~----~ 712 (975)
++.+++... ..||+|++|.||+|.+ +|+.||||.+++... .... .
T Consensus 15 i~~~~i~~~~~~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~ 92 (283)
T PHA02988 15 IESDDIDKYTSVLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVD 92 (283)
T ss_pred cCHHHcCCCCCeEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEeccc
Confidence 344444444 6799999999999988 789999999865311 0000 1
Q ss_pred cCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEeeccCC
Q 002051 713 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLS 791 (975)
Q Consensus 713 ~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~-gIiHrDIKp~NILl~~~g~vkL~DFG~a 791 (975)
...++|+|||||+||+|.+++... ..++......++.|++.||.|||+. +++||||||+|||++.++.+||+|||++
T Consensus 93 ~~~~~~lv~Ey~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~ 170 (283)
T PHA02988 93 DLPRLSLILEYCTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLE 170 (283)
T ss_pred CCCceEEEEEeCCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchH
Confidence 235789999999999999999764 4688899999999999999999984 9999999999999999999999999998
Q ss_pred CccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC--CCCCChhHHHHHHHHHHHHHhCCC
Q 002051 792 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYT 869 (975)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~~~k~DIWSLG~il~ell~G~~ 869 (975)
...... .....|++.|+|||++.+ ..++.++|||||||++|+|++|..
T Consensus 171 ~~~~~~------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~ 220 (283)
T PHA02988 171 KILSSP------------------------------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKI 220 (283)
T ss_pred hhhccc------------------------------cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCC
Confidence 543211 112468899999999976 678999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 870 PFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 870 Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
||.+.+..+.+..+......++.+...+..+.+||.+||+.||++||| +++++.
T Consensus 221 Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps----~~ell~ 274 (283)
T PHA02988 221 PFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPN----IKEILY 274 (283)
T ss_pred CCCCCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcC----HHHHHH
Confidence 999988888888877666555555567899999999999999999999 666653
|
|
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-32 Score=300.58 Aligned_cols=232 Identities=28% Similarity=0.482 Sum_probs=190.8
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEEecc
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITDYC 724 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~Ey~ 724 (975)
..|.....||.|+||.||+|.+..+++.||+|.+.... +........+.|+||||+
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~ 100 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFL 100 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecC
Confidence 34666678999999999999999999999999985421 111122567899999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCc
Q 002051 725 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 804 (975)
Q Consensus 725 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~ 804 (975)
++++|..++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 101 ~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~------- 170 (297)
T cd06659 101 QGGALTDIVSQ---TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD------- 170 (297)
T ss_pred CCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccc-------
Confidence 99999998765 45899999999999999999999999999999999999999999999999988543211
Q ss_pred chhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 002051 805 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANIL 884 (975)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~ 884 (975)
........|+..|+|||++.+..++.++|||||||++|+|++|+.||...+....+..+.
T Consensus 171 --------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~ 230 (297)
T cd06659 171 --------------------VPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLR 230 (297)
T ss_pred --------------------cccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Confidence 011223568999999999998889999999999999999999999998877766666554
Q ss_pred hcCCC-CCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 885 HKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 885 ~~~~~-~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
..... .......+..+.++|.+||+.+|.+||+ +.++++||||...
T Consensus 231 ~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps----~~~ll~~~~~~~~ 277 (297)
T cd06659 231 DSPPPKLKNAHKISPVLRDFLERMLTREPQERAT----AQELLDHPFLLQT 277 (297)
T ss_pred ccCCCCccccCCCCHHHHHHHHHHhcCCcccCcC----HHHHhhChhhccC
Confidence 43222 2222356788999999999999999999 9999999999754
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-32 Score=298.85 Aligned_cols=230 Identities=28% Similarity=0.425 Sum_probs=184.9
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEEEEEe
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCLITD 722 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~lV~E 722 (975)
++|+++++||+|+||.||+|.+..+++.||+|.+.+... ........+.|+|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 479999999999999999999999999999998754321 111225678999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
|++++.|..+.... ..+++..++.++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~---- 154 (286)
T cd07846 81 FVDHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG---- 154 (286)
T ss_pred cCCccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc----
Confidence 99998888877543 458999999999999999999999999999999999999999999999999985532110
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~ 881 (975)
.......++..|+|||++.+ ..++.++|||||||++|+|++|.+||......+...
T Consensus 155 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~ 211 (286)
T cd07846 155 -----------------------EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLY 211 (286)
T ss_pred -----------------------cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHH
Confidence 11123467889999999876 346789999999999999999999998776655444
Q ss_pred HHHhcC-------------------CCCCC----------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 882 NILHKD-------------------LKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 882 ~i~~~~-------------------~~~p~----------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
.+.... ...+. ...++..+.+|+.+||+.+|++||+ +.+++.||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~----~~~il~~~~~ 286 (286)
T cd07846 212 HIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPS----SSQLLHHEFF 286 (286)
T ss_pred HHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchh----HHHHhcCCCC
Confidence 443210 00111 1246788999999999999999999 9999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-32 Score=298.72 Aligned_cols=241 Identities=45% Similarity=0.773 Sum_probs=191.0
Q ss_pred CcccccccccCCceEEEEEEEe---CCCeEEEEEEeccchhc-----------------------------cccccCCeE
Q 002051 670 HFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-----------------------------NRNKTKTHV 717 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~---~t~~~vAiK~l~~~~~~-----------------------------~~~~~~~~~ 717 (975)
+|++.+.||.|+||.||+|.+. .+|+.||+|++...... ........+
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 4889999999999999999985 47899999998643210 111145678
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|+||||+++++|.+++... ..+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 158 (290)
T cd05613 81 HLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHED 158 (290)
T ss_pred EEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccc
Confidence 9999999999999999764 56899999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC--CCCChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~--~~~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
. ........|+..|+|||.+.+. .++.++|||||||++|+|++|..||....
T Consensus 159 ~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~ 212 (290)
T cd05613 159 E--------------------------VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDG 212 (290)
T ss_pred c--------------------------ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCC
Confidence 0 0112235688999999998753 46789999999999999999999996432
Q ss_pred H----HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhh
Q 002051 876 R----QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVR 940 (975)
Q Consensus 876 ~----~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~ 940 (975)
. ......+......+ +..++..+.+|+.+||+.||.+|+++. ..+.+++.||||..++|..+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~~ 280 (290)
T cd05613 213 EKNSQAEISRRILKSEPPY--PQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINWDDLA 280 (290)
T ss_pred ccccHHHHHHHhhccCCCC--CccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCHHHHh
Confidence 2 33333333333333 334788899999999999999998432 349999999999999997663
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-33 Score=311.57 Aligned_cols=223 Identities=35% Similarity=0.540 Sum_probs=189.1
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------ccccccCCeEEEEEeccCC
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------LNRNKTKTHVCLITDYCPG 726 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------~~~~~~~~~~~lV~Ey~~g 726 (975)
...|.+...+|.|+||.|..|.+..+++.+++|++.+..- .....+..++|+|||++.|
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g 400 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDG 400 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccccccccccchhhhhcCCCcceeecceecCCceeeeeehhccc
Confidence 6789999999999999999999999999999999987621 1111267899999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE-ecCCcEEEeeccCCCccCCCCCCCCCcc
Q 002051 727 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL-QGNGHVSLTDFDLSCLTSCKPQLLLPTT 805 (975)
Q Consensus 727 gsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl-~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 805 (975)
+.|.+-+..... +. ..+..|+.||+.|+.|||++|||||||||+|||+ +..|+++|+|||.++.....
T Consensus 401 ~ell~ri~~~~~--~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~-------- 469 (612)
T KOG0603|consen 401 GELLRRIRSKPE--FC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS-------- 469 (612)
T ss_pred cHHHHHHHhcch--hH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh--------
Confidence 999888876422 23 7778899999999999999999999999999999 68999999999998654311
Q ss_pred hhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH
Q 002051 806 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ-KTFANIL 884 (975)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~-~~~~~i~ 884 (975)
..+.+-|..|.|||++....|+.+|||||||++||+|++|+.||...... +++.++.
T Consensus 470 ----------------------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~ 527 (612)
T KOG0603|consen 470 ----------------------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQ 527 (612)
T ss_pred ----------------------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhc
Confidence 12346688999999999999999999999999999999999999875554 4444444
Q ss_pred hcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 885 HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 885 ~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
...+. ..+|..+++||++||+.||.+|++ +.+++.||||
T Consensus 528 ~~~~s----~~vS~~AKdLl~~LL~~dP~~Rl~----~~~i~~h~w~ 566 (612)
T KOG0603|consen 528 MPKFS----ECVSDEAKDLLQQLLQVDPALRLG----ADEIGAHPWF 566 (612)
T ss_pred CCccc----cccCHHHHHHHHHhccCChhhCcC----hhhhccCcch
Confidence 43332 668999999999999999999999 9999999999
|
|
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-32 Score=297.63 Aligned_cols=233 Identities=28% Similarity=0.369 Sum_probs=191.8
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-------------------------ccccccCCeEEEEEec
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-------------------------LNRNKTKTHVCLITDY 723 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-------------------------~~~~~~~~~~~lV~Ey 723 (975)
..|+.+++||.|+||.||+|.+..++..||+|++..... .....+..++|+||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 468899999999999999999999999999998864320 1111256789999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
++|++|.+++.. ..+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~----- 155 (277)
T cd06640 84 LGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ----- 155 (277)
T ss_pred CCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCc-----
Confidence 999999999865 458999999999999999999999999999999999999999999999999985532110
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i 883 (975)
.......++..|+|||.+.+..++.++|+|||||++|+|++|..||...+.......+
T Consensus 156 ----------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~ 213 (277)
T cd06640 156 ----------------------IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI 213 (277)
T ss_pred ----------------------cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhh
Confidence 0112346788999999999888999999999999999999999999887766555544
Q ss_pred HhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCc
Q 002051 884 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936 (975)
Q Consensus 884 ~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~ 936 (975)
.... ........+..+.+||.+||+.+|++||+ +.+++.||||.....
T Consensus 214 ~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~~~ 261 (277)
T cd06640 214 PKNN-PPTLTGEFSKPFKEFIDACLNKDPSFRPT----AKELLKHKFIVKNAK 261 (277)
T ss_pred hcCC-CCCCchhhhHHHHHHHHHHcccCcccCcC----HHHHHhChHhhhcch
Confidence 3322 12222346778999999999999999999 999999999976544
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-32 Score=296.12 Aligned_cols=252 Identities=37% Similarity=0.627 Sum_probs=198.7
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh----------------------------ccccccCCeEEEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM----------------------------LNRNKTKTHVCLI 720 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~----------------------------~~~~~~~~~~~lV 720 (975)
++|.+.+.||+|+||.||+|.+..+++.||+|++.+... .........+|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 479999999999999999999999999999999875311 0111256789999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 800 (975)
|||+.+++|.+++.+. ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.........
T Consensus 81 ~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~ 158 (280)
T cd05581 81 LEYAPNGELLQYIRKY--GSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSP 158 (280)
T ss_pred EcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccc
Confidence 9999999999999875 46999999999999999999999999999999999999999999999999998765432211
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~ 880 (975)
......-. .................|+..|+|||++.+..++.++|+|||||+++++++|..||...+....+
T Consensus 159 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~ 231 (280)
T cd05581 159 ESNKGDAT-------NIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTF 231 (280)
T ss_pred ccCCCCCc-------cccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHH
Confidence 00000000 00000011122334567899999999998888899999999999999999999999988877777
Q ss_pred HHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 881 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 881 ~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
..+......++. .++..+.+||.+||+.+|.+|||+....+++|+||||
T Consensus 232 ~~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 232 QKILKLEYSFPP--NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred HHHHhcCCCCCC--ccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 777655554443 4688999999999999999999922222999999998
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-32 Score=306.38 Aligned_cols=234 Identities=26% Similarity=0.420 Sum_probs=185.2
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------ccc------------c-----ccCCeE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------LNR------------N-----KTKTHV 717 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------~~~------------~-----~~~~~~ 717 (975)
++|++++.||+|+||.||+|++..+++.||||.+..... +.. . ....++
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 84 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV 84 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence 579999999999999999999999999999998764210 000 0 011358
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|+||||+ +++|.+++... ..+++..++.++.||+.||.|||+++++||||||+|||++.++.+||+|||++......
T Consensus 85 ~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 161 (337)
T cd07858 85 YIVYELM-DTDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEK 161 (337)
T ss_pred EEEEeCC-CCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCC
Confidence 9999999 57999998764 56999999999999999999999999999999999999999999999999998654311
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 876 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~ 876 (975)
. .......++..|+|||.+.+ ..++.++|||||||++|+|++|++||.+.+.
T Consensus 162 ~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~ 214 (337)
T cd07858 162 G---------------------------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDY 214 (337)
T ss_pred c---------------------------ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCCh
Confidence 0 11123467889999998865 4688999999999999999999999987655
Q ss_pred HHHHHHHHhc-----------------------CCCCC------CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 877 QKTFANILHK-----------------------DLKFP------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 877 ~~~~~~i~~~-----------------------~~~~p------~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
...+..+... ....+ ....++..+.+||++||+.+|++||| ++++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps----~~ell~ 290 (337)
T cd07858 215 VHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRIT----VEEALA 290 (337)
T ss_pred HHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccC----HHHHHc
Confidence 4433322210 00000 11346788999999999999999999 999999
Q ss_pred CCCccCCCc
Q 002051 928 HPFFKGVNW 936 (975)
Q Consensus 928 Hp~f~~~~~ 936 (975)
||||..+.-
T Consensus 291 h~~~~~~~~ 299 (337)
T cd07858 291 HPYLASLHD 299 (337)
T ss_pred CcchhhhcC
Confidence 999986633
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-32 Score=299.35 Aligned_cols=232 Identities=27% Similarity=0.404 Sum_probs=187.2
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc-----------------------------cccccCCeEEEE
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----------------------------NRNKTKTHVCLI 720 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~-----------------------------~~~~~~~~~~lV 720 (975)
+|.+++.||.|+||.||+|.+..+++.||||.+...... ....+..++|+|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 488899999999999999999999999999998654221 111156789999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 800 (975)
|||+ +++|.+++.... ..+++..++.++.||++||.|||++||+|+||||+|||++.++.++|+|||++.......
T Consensus 81 ~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-- 156 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN-- 156 (298)
T ss_pred Eccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC--
Confidence 9999 999999997643 369999999999999999999999999999999999999999999999999986543110
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
.......+++.|+|||.+.+ ..++.++|||||||++|+|++|.+||.+.+..+.
T Consensus 157 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~ 211 (298)
T cd07841 157 -------------------------RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQ 211 (298)
T ss_pred -------------------------ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHH
Confidence 01122356788999999865 4578899999999999999999999988776665
Q ss_pred HHHHHhcCCC-----------C------------C---CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 880 FANILHKDLK-----------F------------P---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 880 ~~~i~~~~~~-----------~------------p---~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
+.++...... . + .....+..+.+||.+||++||++||| +.+++.||||++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s----~~e~l~~~~~~~ 287 (298)
T cd07841 212 LGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRIT----ARQALEHPYFSN 287 (298)
T ss_pred HHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcC----HHHHhhCccccC
Confidence 5555431100 0 0 01234678899999999999999999 999999999987
Q ss_pred C
Q 002051 934 V 934 (975)
Q Consensus 934 ~ 934 (975)
.
T Consensus 288 ~ 288 (298)
T cd07841 288 D 288 (298)
T ss_pred C
Confidence 5
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-32 Score=294.74 Aligned_cols=231 Identities=27% Similarity=0.453 Sum_probs=186.5
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccch----------------------------------hccccccCC
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV----------------------------------MLNRNKTKT 715 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~----------------------------------~~~~~~~~~ 715 (975)
+|.+.+.||.|+||.||+|.+..+|+.||+|.++... +........
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 5888999999999999999999999999999875311 011112567
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
.+++||||++|++|.+++... +.+++..++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++....
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~ 159 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSD 159 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccc
Confidence 789999999999999999775 568999999999999999999999999999999999999999999999999985432
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC--CCChhHHHHHHHHHHHHHhCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--HTSAVDWWALGILLYEMLYGYTPFRG 873 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~--~~~k~DIWSLG~il~ell~G~~Pf~~ 873 (975)
... .........|+..|+|||.+.... ++.++|+||||+++|++++|..||..
T Consensus 160 ~~~-------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~ 214 (272)
T cd06629 160 DIY-------------------------DNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSD 214 (272)
T ss_pred ccc-------------------------cccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcC
Confidence 100 001122346889999999987654 78899999999999999999999976
Q ss_pred CCHHHHHHHHHhcCC--CCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 874 KTRQKTFANILHKDL--KFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 874 ~~~~~~~~~i~~~~~--~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
......+..+..... .++.. ..++..+.+||.+||.++|++||| ++++|+||||
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~~~~~ 272 (272)
T cd06629 215 EEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPT----ARELLQHPFI 272 (272)
T ss_pred cchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCC----HHHHhhCCCC
Confidence 665554444433222 22222 246789999999999999999999 9999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=297.11 Aligned_cols=117 Identities=32% Similarity=0.475 Sum_probs=102.9
Q ss_pred ccccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-------------------------------ccc
Q 002051 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-------------------------------LNR 710 (975)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-------------------------------~~~ 710 (975)
.++.+..++|.+.++||+|.|++||+|.+..+.+.||+|+.+.... ++.
T Consensus 71 IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~ 150 (590)
T KOG1290|consen 71 IGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDH 150 (590)
T ss_pred ccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeecc
Confidence 5667788999999999999999999999999999999999875421 111
Q ss_pred cc----cCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEec
Q 002051 711 NK----TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQG 779 (975)
Q Consensus 711 ~~----~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~-gIiHrDIKp~NILl~~ 779 (975)
+. +..|+|||+|++ |.+|..+|++.....++...++.|++|||.||.|||.. ||||.||||+|||+..
T Consensus 151 FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~ 223 (590)
T KOG1290|consen 151 FKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCS 223 (590)
T ss_pred ceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeec
Confidence 11 678999999999 99999999998788899999999999999999999975 9999999999999953
|
|
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-32 Score=292.37 Aligned_cols=230 Identities=25% Similarity=0.488 Sum_probs=190.5
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------cccc--ccCCeEEEEE
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRN--KTKTHVCLIT 721 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~--~~~~~~~lV~ 721 (975)
+|++++.||.|+||.||+|.+..+++.||+|.+..... .... .....+|++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 58899999999999999999999999999998864311 0000 1345689999
Q ss_pred eccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHH-----HCCCeecCCCCCCEEEecCCcEEEeeccCCCcc
Q 002051 722 DYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLH-----CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 794 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qIl~aL~yLH-----~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~ 794 (975)
||+++++|.+++... ....+++..++.++.||+.||.||| +.+++|+||||+||+++.++.+||+|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999999998753 2357899999999999999999999 899999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCC
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 874 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~ 874 (975)
.... .......|++.|+|||.+.+..++.++|+||||+++|+|++|..||...
T Consensus 161 ~~~~---------------------------~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 213 (265)
T cd08217 161 GHDS---------------------------SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTAR 213 (265)
T ss_pred cCCc---------------------------ccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCc
Confidence 3211 0112346899999999999888999999999999999999999999988
Q ss_pred CHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 875 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
+.......+...... +.....+..+.+++.+||+.+|.+||+ +.+|++|||+
T Consensus 214 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~p~~Rp~----~~~il~~~~~ 265 (265)
T cd08217 214 NQLQLASKIKEGKFR-RIPYRYSSELNEVIKSMLNVDPDKRPS----TEELLQLPLI 265 (265)
T ss_pred CHHHHHHHHhcCCCC-CCccccCHHHHHHHHHHccCCcccCCC----HHHHhhCCCC
Confidence 766666555554332 223457789999999999999999999 9999999995
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-32 Score=300.64 Aligned_cols=232 Identities=24% Similarity=0.338 Sum_probs=178.9
Q ss_pred ccCCCcccccccccCCceEEEEEEEeC----------------CCeEEEEEEeccchh----------------------
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCG----------------SGQYFAMKAMDKGVM---------------------- 707 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~----------------t~~~vAiK~l~~~~~---------------------- 707 (975)
+..++|++.++||+|+||.||+|.+.. ++..||+|++.....
T Consensus 2 ~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 81 (304)
T cd05096 2 FPRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNI 81 (304)
T ss_pred CchhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCe
Confidence 346789999999999999999998632 345799999865310
Q ss_pred ---ccccccCCeEEEEEeccCCCCHHHHHhhCC-----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 002051 708 ---LNRNKTKTHVCLITDYCPGGELFLLLDRQP-----------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIY 767 (975)
Q Consensus 708 ---~~~~~~~~~~~lV~Ey~~ggsL~~~l~~~~-----------------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiH 767 (975)
.........+|+||||+++|+|.+++.... ...++...+..++.||+.||.|||++||+|
T Consensus 82 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH 161 (304)
T cd05096 82 IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVH 161 (304)
T ss_pred eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 011124567899999999999999986531 124677889999999999999999999999
Q ss_pred cCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC
Q 002051 768 RDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG 847 (975)
Q Consensus 768 rDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~ 847 (975)
|||||+|||++.++.+||+|||++....... .........++..|+|||++.+..
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~ 216 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGD-------------------------YYRIQGRAVLPIRWMAWECILMGK 216 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCc-------------------------eeEecCcCCCCccccCHHHHhcCC
Confidence 9999999999999999999999986432110 001122345678999999999888
Q ss_pred CCChhHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHh---c---CCCCCCCCCCcHHHHHHHHHhcccCccccCCCh
Q 002051 848 HTSAVDWWALGILLYEMLY--GYTPFRGKTRQKTFANILH---K---DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH 919 (975)
Q Consensus 848 ~~~k~DIWSLG~il~ell~--G~~Pf~~~~~~~~~~~i~~---~---~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~ 919 (975)
++.++|||||||++|+|++ +..||.+.+....+..+.. . ......+..++..+.+||.+||+.||.+|||
T Consensus 217 ~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs-- 294 (304)
T cd05096 217 FTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPS-- 294 (304)
T ss_pred CCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcC--
Confidence 9999999999999999986 6788887776665554432 1 1111223456789999999999999999999
Q ss_pred hhHHHHH
Q 002051 920 EGANEIK 926 (975)
Q Consensus 920 ~~~~elL 926 (975)
+.+|.
T Consensus 295 --~~~i~ 299 (304)
T cd05096 295 --FSDIH 299 (304)
T ss_pred --HHHHH
Confidence 77773
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=305.88 Aligned_cols=234 Identities=27% Similarity=0.420 Sum_probs=193.4
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------------ccccccCCe
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------------LNRNKTKTH 716 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------------~~~~~~~~~ 716 (975)
+..++|.+....|+|-||+|..|.+..-|+.||||++....+ ...+...+|
T Consensus 429 ~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknH 508 (752)
T KOG0670|consen 429 LLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNH 508 (752)
T ss_pred hhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcce
Confidence 456789999999999999999999999999999999976532 222337899
Q ss_pred EEEEEeccCCCCHHHHHhhCCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC-CcEEEeeccCCCcc
Q 002051 717 VCLITDYCPGGELFLLLDRQPTK-VLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLT 794 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~-~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~-g~vkL~DFG~a~~~ 794 (975)
+|||+|.+ ..+|.++|++.+.. .|....++.++.|++.||..|-..||+|.||||+|||++.. ..+||||||.|...
T Consensus 509 LClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~ 587 (752)
T KOG0670|consen 509 LCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFA 587 (752)
T ss_pred eEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCcccccc
Confidence 99999999 77999999985433 68899999999999999999999999999999999999965 46899999998554
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCC
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 874 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~ 874 (975)
+.+. -+.+.-+..|.|||+++|.+|++..|+||+||+||||++|+..|.|.
T Consensus 588 ~ene-----------------------------itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~ 638 (752)
T KOG0670|consen 588 SENE-----------------------------ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGR 638 (752)
T ss_pred cccc-----------------------------ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCC
Confidence 4221 11234467899999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCCCCC----------------------------------------C-----------CCC-------
Q 002051 875 TRQKTFANILHKDLKFPS----------------------------------------S-----------TPT------- 896 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~~p~----------------------------------------~-----------~~~------- 896 (975)
+...++...+....++|. + ..+
T Consensus 639 TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~ 718 (752)
T KOG0670|consen 639 TNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKI 718 (752)
T ss_pred CcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHH
Confidence 998888766542222221 0 001
Q ss_pred cHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 897 SLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 897 s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
-..+++||.+||..||++|+| +.++|.||||..
T Consensus 719 ~~~~rdLLdkml~LdP~KRit----~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 719 VQQLRDLLDKMLILDPEKRIT----VNQALKHPFITE 751 (752)
T ss_pred HHHHHHHHHHHhccChhhcCC----HHHHhcCCcccC
Confidence 124789999999999999999 999999999974
|
|
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-32 Score=293.78 Aligned_cols=230 Identities=23% Similarity=0.352 Sum_probs=185.5
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc-----------cc-----------cccCCeEEEEEe
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----------NR-----------NKTKTHVCLITD 722 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~-----------~~-----------~~~~~~~~lV~E 722 (975)
.+..++|++.++||+|+||.||+|.+..++ .||+|++.+.... .. .....+.|+|||
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~-~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e 80 (262)
T cd05071 2 EIPRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTE 80 (262)
T ss_pred CCChHHeeEeeecCCCCCCcEEEEEecCCc-eEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEE
Confidence 355678999999999999999999886654 5999998753210 00 013456789999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
|+++|+|.+++.......++...+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||.+........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~--- 157 (262)
T cd05071 81 YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY--- 157 (262)
T ss_pred cCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccccc---
Confidence 99999999999875455689999999999999999999999999999999999999999999999999865431110
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFA 881 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~ 881 (975)
.......++..|+|||++.+..++.++|||||||++|+|++ |..||.+........
T Consensus 158 -----------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~ 214 (262)
T cd05071 158 -----------------------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD 214 (262)
T ss_pred -----------------------ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Confidence 01112346778999999988889999999999999999999 899998887777666
Q ss_pred HHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 882 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 882 ~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
.+... ...+....++..+.+||.+||+.||++||+ +++++
T Consensus 215 ~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~----~~~~~ 254 (262)
T cd05071 215 QVERG-YRMPCPPECPESLHDLMCQCWRKEPEERPT----FEYLQ 254 (262)
T ss_pred HHhcC-CCCCCccccCHHHHHHHHHHccCCcccCCC----HHHHH
Confidence 65443 334444567889999999999999999999 66654
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=290.62 Aligned_cols=230 Identities=26% Similarity=0.467 Sum_probs=191.5
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------------------hccccccCCeEEEEEec
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------------------MLNRNKTKTHVCLITDY 723 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------------~~~~~~~~~~~~lV~Ey 723 (975)
+|.+.+.||.|+||.||++.++.+|..||+|.+.... +.........+|+|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 5889999999999999999999999999999985431 11112256788999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC-cEEEeeccCCCccCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g-~vkL~DFG~a~~~~~~~~~~~ 802 (975)
+++++|.+++.......+++..+..++.||+.||.|||+++++|+||||+||+++.++ .+||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~---- 156 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM---- 156 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc----
Confidence 9999999999876555689999999999999999999999999999999999999876 46999999885543110
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 882 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~ 882 (975)
.......|++.|+|||++.+..++.++|+|||||++|+|++|..||...+.......
T Consensus 157 -----------------------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~ 213 (257)
T cd08225 157 -----------------------ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLK 213 (257)
T ss_pred -----------------------ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHH
Confidence 011234588999999999888899999999999999999999999988777666666
Q ss_pred HHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 883 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 883 i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
+...... +.....+..+.++|.+||..+|++||| +.+++.||||
T Consensus 214 ~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~Rpt----~~~ll~~~~~ 257 (257)
T cd08225 214 ICQGYFA-PISPNFSRDLRSLISQLFKVSPRDRPS----ITSILKRPFL 257 (257)
T ss_pred HhcccCC-CCCCCCCHHHHHHHHHHhccChhhCcC----HHHHhhCCCC
Confidence 5554332 223456789999999999999999999 9999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=289.95 Aligned_cols=228 Identities=31% Similarity=0.480 Sum_probs=187.5
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------------ccccccCCeEEEE
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------------LNRNKTKTHVCLI 720 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------------~~~~~~~~~~~lV 720 (975)
+|+..+.||+|+||.||+|....+++.|++|.+..... .........+|+|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 47888999999999999999998999999998754320 1111255788999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 800 (975)
|||+++++|.+++.+. ..+++..+..++.||+.||.|||++||+|+||+|+||+++.++.+||+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~--- 155 (258)
T cd06632 81 LELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEF--- 155 (258)
T ss_pred EEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceecccc---
Confidence 9999999999999764 45899999999999999999999999999999999999999999999999988543211
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC-CCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
.......|++.|++||.+.... ++.++|+|||||++|+|++|..||........
T Consensus 156 -------------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~ 210 (258)
T cd06632 156 -------------------------SFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAA 210 (258)
T ss_pred -------------------------ccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHH
Confidence 0122456889999999997766 88999999999999999999999987665555
Q ss_pred HHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 880 ~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
...+.........+..++..+.+||.+||+.+|.+||+ +.+++.|||+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~~l~~~~~ 258 (258)
T cd06632 211 VFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPT----AAELLEHPFV 258 (258)
T ss_pred HHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcC----HHHHhcCCCC
Confidence 55444322222223457889999999999999999999 9999999996
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-32 Score=298.49 Aligned_cols=234 Identities=27% Similarity=0.364 Sum_probs=190.9
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-------------------------hccccccCCeEEEEEec
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------------------MLNRNKTKTHVCLITDY 723 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------------------~~~~~~~~~~~~lV~Ey 723 (975)
+.|++++.||.|+||.||+|.+..+++.||+|.+.... +........++|+||||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence 35888999999999999999999999999999876431 11122256789999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
+++++|.+++.. ..+++..++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~----- 155 (277)
T cd06642 84 LGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ----- 155 (277)
T ss_pred cCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcc-----
Confidence 999999998864 468999999999999999999999999999999999999999999999999986543110
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i 883 (975)
.......|+..|+|||.+.+..++.++|+|||||++|+|++|..||...........+
T Consensus 156 ----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~ 213 (277)
T cd06642 156 ----------------------IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLI 213 (277)
T ss_pred ----------------------hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhh
Confidence 0112346788999999999988999999999999999999999999776655544443
Q ss_pred HhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcc
Q 002051 884 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 937 (975)
Q Consensus 884 ~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~ 937 (975)
..... .......+..+.++|.+||+.+|++||+ +.+++.||||....+.
T Consensus 214 ~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~~~~ 262 (277)
T cd06642 214 PKNSP-PTLEGQYSKPFKEFVEACLNKDPRFRPT----AKELLKHKFITRYTKK 262 (277)
T ss_pred hcCCC-CCCCcccCHHHHHHHHHHccCCcccCcC----HHHHHHhHHHHHHhhh
Confidence 33221 1122346788999999999999999999 9999999999865543
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-32 Score=296.31 Aligned_cols=232 Identities=27% Similarity=0.460 Sum_probs=187.3
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-------------h---------------ccccccCCeEEEEE
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------M---------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------~---------------~~~~~~~~~~~lV~ 721 (975)
.|++++.||.|+||.||+|.+..+++.||+|.+.... + ........+.|+||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 5889999999999999999999999999999875421 0 00112456789999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
||++|++|.+++.. ..+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~--- 155 (277)
T cd06917 82 EYAEGGSVRTLMKA---GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS--- 155 (277)
T ss_pred ecCCCCcHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc---
Confidence 99999999999865 368999999999999999999999999999999999999999999999999986543211
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~ 880 (975)
.......|+..|+|||.+.+ ..++.++|+|||||++|+|++|..||.+.......
T Consensus 156 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~ 211 (277)
T cd06917 156 ------------------------SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAM 211 (277)
T ss_pred ------------------------cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhh
Confidence 11223468899999999865 45688999999999999999999999887665544
Q ss_pred HHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCC
Q 002051 881 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935 (975)
Q Consensus 881 ~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~ 935 (975)
..+.....+.......+..+.+||.+||+.||++||+ +.+++.|+||++..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~----~~~il~~~~~~~~~ 262 (277)
T cd06917 212 MLIPKSKPPRLEDNGYSKLLREFVAACLDEEPKERLS----AEELLKSKWIKAHS 262 (277)
T ss_pred hccccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcC----HHHHhhChHhhccc
Confidence 3332221111111236789999999999999999999 99999999997654
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-32 Score=292.58 Aligned_cols=233 Identities=29% Similarity=0.483 Sum_probs=193.2
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-------------------------ccccccCCeEEEEEec
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-------------------------LNRNKTKTHVCLITDY 723 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-------------------------~~~~~~~~~~~lV~Ey 723 (975)
++|++.+.||.|+||.||+|.+..+++.||+|++..... .........+|+||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 368999999999999999999999999999999765421 0111256788999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~-~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
+++++|.+++... ..+++..+..++.||+.||.|||+ +|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~---- 154 (264)
T cd06623 81 MDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL---- 154 (264)
T ss_pred cCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCC----
Confidence 9999999999865 569999999999999999999999 999999999999999999999999999886543110
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCC---CHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK---TRQKT 879 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~---~~~~~ 879 (975)
.......++..|+|||.+.+..++.++|+||||+++|+|++|..||... .....
T Consensus 155 -----------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~ 211 (264)
T cd06623 155 -----------------------DQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFEL 211 (264)
T ss_pred -----------------------CcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHH
Confidence 1112346788999999999888999999999999999999999999776 34444
Q ss_pred HHHHHhcCCCCCCCCC-CcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCC
Q 002051 880 FANILHKDLKFPSSTP-TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935 (975)
Q Consensus 880 ~~~i~~~~~~~p~~~~-~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~ 935 (975)
...+..... .+.... ++..+.++|.+||..+|++||| +.+++.||||+..+
T Consensus 212 ~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~R~~----~~~ll~~~~~~~~~ 263 (264)
T cd06623 212 MQAICDGPP-PSLPAEEFSPEFRDFISACLQKDPKKRPS----AAELLQHPFIKKAD 263 (264)
T ss_pred HHHHhcCCC-CCCCcccCCHHHHHHHHHHccCChhhCCC----HHHHHhCHHHHhcc
Confidence 444443322 222333 7889999999999999999999 99999999998654
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-31 Score=291.91 Aligned_cols=230 Identities=23% Similarity=0.382 Sum_probs=185.8
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhcc-----------c-----------cccCCeEEEEEe
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-----------R-----------NKTKTHVCLITD 722 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~-----------~-----------~~~~~~~~lV~E 722 (975)
.+..++|+++++||+|+||.||+|.+. ++..+|+|.+....... . .......|+|||
T Consensus 2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e 80 (260)
T cd05070 2 EIPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTE 80 (260)
T ss_pred CCchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEE
Confidence 456678999999999999999999875 55679999887532100 0 013455789999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
|+++++|.+++.......+++..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~---- 156 (260)
T cd05070 81 YMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNE---- 156 (260)
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcc----
Confidence 9999999999987555568999999999999999999999999999999999999999999999999986543110
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFA 881 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~ 881 (975)
........++..|+|||.+.+..++.++|||||||++|+|++ |.+||.+.+..+...
T Consensus 157 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~ 214 (260)
T cd05070 157 ----------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLE 214 (260)
T ss_pred ----------------------cccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 001112235678999999988889999999999999999998 999998887777776
Q ss_pred HHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 882 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 882 ~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
.+... ...+.+...+..+.+|+.+||.++|++||| +++++
T Consensus 215 ~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~l~ 254 (260)
T cd05070 215 QVERG-YRMPCPQDCPISLHELMLQCWKKDPEERPT----FEYLQ 254 (260)
T ss_pred HHHcC-CCCCCCCcCCHHHHHHHHHHcccCcccCcC----HHHHH
Confidence 66543 344445567889999999999999999999 66664
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-31 Score=296.27 Aligned_cols=231 Identities=29% Similarity=0.468 Sum_probs=184.4
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEEEEEe
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCLITD 722 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~lV~E 722 (975)
++|++.+.||.|+||.||+|.+..+++.||+|.++.... .......+.+|+|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 479999999999999999999999999999998764310 111125678999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
|++++.+..++.+. ..+++..+..++.||+.||.|||++|++|+||+|+||+++.++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~--- 155 (288)
T cd07833 81 YVERTLLELLEASP--GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA--- 155 (288)
T ss_pred cCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc---
Confidence 99876666655443 4589999999999999999999999999999999999999999999999999865432110
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~ 881 (975)
.......++..|+|||++.+. .++.++||||||+++|+|++|.+||.+.+..+.+.
T Consensus 156 -----------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~ 212 (288)
T cd07833 156 -----------------------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLY 212 (288)
T ss_pred -----------------------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 112235678999999999888 78899999999999999999999998776655444
Q ss_pred HHHhcC-------------------CCCCC-----------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 882 NILHKD-------------------LKFPS-----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 882 ~i~~~~-------------------~~~p~-----------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
.+.... ..++. ...++..+.+||++||..+|++||| ++++++||||
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~~~~f 288 (288)
T cd07833 213 LIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLT----CDELLQHPYF 288 (288)
T ss_pred HHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhccc----HHHHhcCCCC
Confidence 332200 00100 1123778999999999999999999 9999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=295.98 Aligned_cols=231 Identities=28% Similarity=0.471 Sum_probs=190.7
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEEeccC
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITDYCP 725 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~Ey~~ 725 (975)
.|...+.||.|+||.||++.+..+++.+|+|.+.... +........+.|+|+||++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 4666789999999999999999999999999875321 0111125678899999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcc
Q 002051 726 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 805 (975)
Q Consensus 726 ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 805 (975)
|++|.+++.. ..++...+..++.||+.||.|||++||+||||+|+||+++.++.++|+|||.+......
T Consensus 100 ~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~-------- 168 (285)
T cd06648 100 GGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE-------- 168 (285)
T ss_pred CCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccC--------
Confidence 9999999876 45899999999999999999999999999999999999999999999999987543210
Q ss_pred hhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q 002051 806 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH 885 (975)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~ 885 (975)
........|++.|+|||.+.+..++.++|||||||++|+|++|..||...+....+..+..
T Consensus 169 -------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~ 229 (285)
T cd06648 169 -------------------VPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRD 229 (285)
T ss_pred -------------------CcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHh
Confidence 0111234688999999999988899999999999999999999999988877776666655
Q ss_pred cCCCCC-CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 886 KDLKFP-SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 886 ~~~~~p-~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
...... ....++..+.+||.+||.++|++||| +.+++.||||+..
T Consensus 230 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~il~~~~~~~~ 275 (285)
T cd06648 230 NLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRAT----AAELLNHPFLAKA 275 (285)
T ss_pred cCCCCCcccccCCHHHHHHHHHHcccChhhCcC----HHHHccCcccccC
Confidence 432221 22336789999999999999999999 9999999999764
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-32 Score=305.18 Aligned_cols=257 Identities=26% Similarity=0.426 Sum_probs=197.1
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------cc------------cccc------CC
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------LN------------RNKT------KT 715 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------~~------------~~~~------~~ 715 (975)
.++|++++.||.|+||.||+|.+..+++.||||.+.+... +. .... ..
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFH 93 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccc
Confidence 5679999999999999999999999999999998854210 00 0001 13
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
++|+||||+ |++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++....
T Consensus 94 ~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~ 169 (343)
T cd07880 94 DFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTD 169 (343)
T ss_pred eEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccc
Confidence 569999999 8899988864 468999999999999999999999999999999999999999999999999985432
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 874 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~ 874 (975)
. ......+++.|+|||.+.+ ..++.++|+|||||++|+|++|..||.+.
T Consensus 170 ~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~ 219 (343)
T cd07880 170 S------------------------------EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGH 219 (343)
T ss_pred c------------------------------CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 1 1123457889999999876 45788999999999999999999999887
Q ss_pred CHHHHHHHHHhcCCCCC-----------------------------CCCCCcHHHHHHHHHhcccCccccCCChhhHHHH
Q 002051 875 TRQKTFANILHKDLKFP-----------------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 925 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~~p-----------------------------~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~el 925 (975)
+....+..+.......+ ....++..+.++|.+||+.||.+||| +.++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t----~~~~ 295 (343)
T cd07880 220 DHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRIT----AAEA 295 (343)
T ss_pred CHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCC----HHHH
Confidence 76555554433211100 01346778999999999999999999 9999
Q ss_pred HcCCCccCCCcchhhccCCCCCCCCCcccCcccccccCCcchhhhhh
Q 002051 926 KKHPFFKGVNWALVRCMNPPELDAPLFATDTEKEYKVVDPGMQDLQQ 972 (975)
Q Consensus 926 L~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 972 (975)
+.||||+...-... .+ ..| ++..+.+.++.++++.+.
T Consensus 296 l~~~~~~~~~~~~~----~~--~~~----~~~~~~~~~~~~~~~~~~ 332 (343)
T cd07880 296 LAHPYFEEFHDPED----ET--EAP----PYDDSFDEVDQSLEEWKR 332 (343)
T ss_pred hcCccHhhhcCccc----cc--CCC----CccccHHhhccchHHHHH
Confidence 99999986522111 11 111 244556666666666554
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-31 Score=298.54 Aligned_cols=235 Identities=24% Similarity=0.363 Sum_probs=181.8
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------cccc--------------------cc
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------LNRN--------------------KT 713 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------~~~~--------------------~~ 713 (975)
.++|+++++||.|+||.||+|.+..+++.||||.+..... +... ..
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 5689999999999999999999999999999998753210 0000 01
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 714 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 714 ~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
..+.|+||||+ +++|.+++... ...+++..++.++.||+.||.|||++|++|+||||+|||++.++.+||+|||++..
T Consensus 91 ~~~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 168 (310)
T cd07865 91 KGSFYLVFEFC-EHDLAGLLSNK-NVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARA 168 (310)
T ss_pred CceEEEEEcCC-CcCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCccc
Confidence 24569999999 56898888654 24689999999999999999999999999999999999999999999999999865
Q ss_pred cCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCC
Q 002051 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFR 872 (975)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~ 872 (975)
....... .........++..|+|||.+.+. .++.++||||||+++|+|++|.+||.
T Consensus 169 ~~~~~~~-----------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~ 225 (310)
T cd07865 169 FSLSKNS-----------------------KPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQ 225 (310)
T ss_pred ccCCccc-----------------------CCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCC
Confidence 4321110 00111234678899999998764 36889999999999999999999998
Q ss_pred CCCHHHHHHHHHhcC-------------------CCCCCC-----------CCCcHHHHHHHHHhcccCccccCCChhhH
Q 002051 873 GKTRQKTFANILHKD-------------------LKFPSS-----------TPTSLHAKQLMYRLLHRDPKSRLGSHEGA 922 (975)
Q Consensus 873 ~~~~~~~~~~i~~~~-------------------~~~p~~-----------~~~s~~~~~li~~~L~~dP~~R~t~~~~~ 922 (975)
+.+.......+.... ..++.. ...+..+.+||.+||..||.+||| +
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t----~ 301 (310)
T cd07865 226 GNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRID----A 301 (310)
T ss_pred CCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccC----H
Confidence 876654443332210 001100 113567889999999999999999 9
Q ss_pred HHHHcCCCc
Q 002051 923 NEIKKHPFF 931 (975)
Q Consensus 923 ~elL~Hp~f 931 (975)
+++|+||||
T Consensus 302 ~e~l~h~~f 310 (310)
T cd07865 302 DTALNHDFF 310 (310)
T ss_pred HHHhcCCCC
Confidence 999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.4e-32 Score=291.53 Aligned_cols=226 Identities=22% Similarity=0.385 Sum_probs=184.4
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc----------------------c-ccccCCeEEEEE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML----------------------N-RNKTKTHVCLIT 721 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~----------------------~-~~~~~~~~~lV~ 721 (975)
.+++.+|++.+.||+|+||.||++... |..+|+|.++..... . .......+|+||
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (256)
T cd05082 2 ALNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 79 (256)
T ss_pred CccHHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEE
Confidence 466789999999999999999999764 778999988654211 0 112456789999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
||+++++|.+++.......+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~----- 154 (256)
T cd05082 80 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS----- 154 (256)
T ss_pred ECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccc-----
Confidence 999999999999876555689999999999999999999999999999999999999999999999998854221
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTF 880 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~ 880 (975)
......++..|+|||++.+..++.++|||||||++|+|++ |+.||.........
T Consensus 155 -------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~ 209 (256)
T cd05082 155 -------------------------TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 209 (256)
T ss_pred -------------------------cCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 0112234567999999998889999999999999999997 99999887766666
Q ss_pred HHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 881 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 881 ~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
..+... ........++..+.++|.+||+.+|++||| +.++++
T Consensus 210 ~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~l~~ 251 (256)
T cd05082 210 PRVEKG-YKMDAPDGCPPVVYDVMKQCWHLDAATRPS----FLQLRE 251 (256)
T ss_pred HHHhcC-CCCCCCCCCCHHHHHHHHHHhcCChhhCcC----HHHHHH
Confidence 555443 333334457889999999999999999999 777654
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.9e-32 Score=299.11 Aligned_cols=239 Identities=26% Similarity=0.344 Sum_probs=184.6
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~lV~ 721 (975)
.++|...+.||+|+||.||++.+..+++.||+|.+.+... ..........+++|
T Consensus 3 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~ 82 (288)
T cd06616 3 AEDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM 82 (288)
T ss_pred HHHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence 4578889999999999999999999999999998864310 01112456678999
Q ss_pred eccCCCCHHHHHh---hCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 722 DYCPGGELFLLLD---RQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 722 Ey~~ggsL~~~l~---~~~~~~l~~~~i~~i~~qIl~aL~yLH~~-gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
||+ +++|.++.. ......+++..+..++.|++.||+|||+. ||+||||||+|||++.++.++|+|||++......
T Consensus 83 e~~-~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 83 ELM-DISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred ecc-cCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 999 456655432 22335799999999999999999999975 9999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC---CCCChhHHHHHHHHHHHHHhCCCCCCCC
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA---GHTSAVDWWALGILLYEMLYGYTPFRGK 874 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~---~~~~k~DIWSLG~il~ell~G~~Pf~~~ 874 (975)
.......|++.|+|||.+.+. .++.++|||||||++|+|++|+.||...
T Consensus 162 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 213 (288)
T cd06616 162 ----------------------------IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKW 213 (288)
T ss_pred ----------------------------CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhc
Confidence 011233578899999999776 6888999999999999999999999765
Q ss_pred CH-HHHHHHHHhcCC-CCC--CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchh
Q 002051 875 TR-QKTFANILHKDL-KFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 939 (975)
Q Consensus 875 ~~-~~~~~~i~~~~~-~~p--~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~ 939 (975)
.. .+.+..+..... ..+ ....++..+.+||.+||++||++||| +++|+.||||+...+...
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~i~~~~~~~~~~~~~~ 278 (288)
T cd06616 214 NSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPK----YKELLEHPFIKDYEERNV 278 (288)
T ss_pred chHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcC----HHHHhcChhhhchhhcch
Confidence 42 122233322221 111 12347889999999999999999999 999999999987665543
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.4e-32 Score=299.33 Aligned_cols=234 Identities=26% Similarity=0.446 Sum_probs=191.4
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh------------------------ccccccCCeEEEEEec
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM------------------------LNRNKTKTHVCLITDY 723 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~------------------------~~~~~~~~~~~lV~Ey 723 (975)
.++|.+++.||+|+||.||++.+..+++.||+|.+..... ..........|+|+||
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~ 97 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY 97 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence 4689999999999999999999998999999998754310 1111245678999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
+++++|.+++.. ..++...+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 98 ~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~----- 169 (293)
T cd06647 98 LAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ----- 169 (293)
T ss_pred CCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccc-----
Confidence 999999999875 357899999999999999999999999999999999999999999999999875432110
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i 883 (975)
.......|++.|++||.+.+..++.++|+|||||++|++++|..||...+....+..+
T Consensus 170 ----------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~ 227 (293)
T cd06647 170 ----------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI 227 (293)
T ss_pred ----------------------cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeeh
Confidence 1112346889999999998888899999999999999999999999877665444333
Q ss_pred Hh-cCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCC
Q 002051 884 LH-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935 (975)
Q Consensus 884 ~~-~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~ 935 (975)
.. ....++....++..+.+||.+||..+|++||+ +.+++.|+||+...
T Consensus 228 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~----~~~il~h~~~~~~~ 276 (293)
T cd06647 228 ATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGS----AKELLQHPFLKIAK 276 (293)
T ss_pred hcCCCCCCCCccccCHHHHHHHHHHccCChhhCcC----HHHHhcCHHHhcCc
Confidence 32 22233333446788999999999999999999 99999999998653
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.2e-32 Score=297.81 Aligned_cols=231 Identities=24% Similarity=0.384 Sum_probs=185.1
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc--------------------------cccccC--CeEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--------------------------NRNKTK--THVCL 719 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~--------------------------~~~~~~--~~~~l 719 (975)
.++|++.+.||.|+||.||+|.+..+++.+|+|.++..... ...... .++|+
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence 45799999999999999999999999999999988643210 000123 78999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
||||+. ++|.+++.... ..+++..++.++.||+.||.|||++|++|+||||+|||++.++.++|+|||++.......
T Consensus 84 v~e~~~-~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~- 160 (293)
T cd07843 84 VMEYVE-HDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL- 160 (293)
T ss_pred EehhcC-cCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc-
Confidence 999995 59999987643 368999999999999999999999999999999999999999999999999886543110
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC-CCChhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~ 878 (975)
.......+++.|+|||.+.+.. ++.++|||||||++|+|++|.+||...+...
T Consensus 161 --------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~ 214 (293)
T cd07843 161 --------------------------KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEID 214 (293)
T ss_pred --------------------------cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 1112345788999999987654 5889999999999999999999998877766
Q ss_pred HHHHHHhcCC-------------------CC---------CCCCC--CcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 879 TFANILHKDL-------------------KF---------PSSTP--TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 879 ~~~~i~~~~~-------------------~~---------p~~~~--~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
.+.++..... .+ ..... ++..+.+||++||+.+|++||| +.|+|.|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t----~~ell~~ 290 (293)
T cd07843 215 QLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRIS----AEDALKH 290 (293)
T ss_pred HHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCC----HHHHhcC
Confidence 6555432100 00 00111 4778999999999999999999 9999999
Q ss_pred CCc
Q 002051 929 PFF 931 (975)
Q Consensus 929 p~f 931 (975)
|||
T Consensus 291 ~~f 293 (293)
T cd07843 291 PYF 293 (293)
T ss_pred CCC
Confidence 998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.3e-32 Score=301.36 Aligned_cols=232 Identities=23% Similarity=0.334 Sum_probs=184.3
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCe----EEEEEEeccchh-------------cccc-----------ccCCeE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVM-------------LNRN-----------KTKTHV 717 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~----~vAiK~l~~~~~-------------~~~~-----------~~~~~~ 717 (975)
+...+|++++.||+|+||.||+|.+..+++ .||+|.++.... +... ......
T Consensus 4 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~ 83 (316)
T cd05108 4 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV 83 (316)
T ss_pred cchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCc
Confidence 456789999999999999999999876665 489999864310 0000 023456
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
++|+||+++|+|.+++... ...++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 84 ~~v~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 162 (316)
T cd05108 84 QLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAD 162 (316)
T ss_pred eeeeecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCC
Confidence 7999999999999999864 245888999999999999999999999999999999999999999999999999764321
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 876 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~ 876 (975)
... .......++..|+|||++.+..++.++|||||||++|+|++ |..||.+...
T Consensus 163 ~~~-------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~ 217 (316)
T cd05108 163 EKE-------------------------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 217 (316)
T ss_pred Ccc-------------------------eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH
Confidence 100 00112234678999999999999999999999999999997 9999987765
Q ss_pred HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 877 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 877 ~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
.+. ..+......++....++..+.+++.+||..+|++||+ +.+++.+
T Consensus 218 ~~~-~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps----~~~l~~~ 264 (316)
T cd05108 218 SEI-SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK----FRELIIE 264 (316)
T ss_pred HHH-HHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence 544 4555555556666667889999999999999999999 6666654
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.3e-31 Score=292.93 Aligned_cols=229 Identities=25% Similarity=0.429 Sum_probs=184.8
Q ss_pred cccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEEEEEecc
Q 002051 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCLITDYC 724 (975)
Q Consensus 671 y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~lV~Ey~ 724 (975)
|++++.||.|++|.||+|.+..+|+.||+|++..... ........+.|+||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 6788999999999999999999999999998764321 11122567899999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCc
Q 002051 725 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 804 (975)
Q Consensus 725 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~ 804 (975)
+++|.+++.......+++..+..++.||+.||.|||+++++||||+|+||+++.++.++|+|||++.......
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~------ 153 (283)
T cd07835 81 -DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV------ 153 (283)
T ss_pred -CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc------
Confidence 5699999987654579999999999999999999999999999999999999999999999999986532110
Q ss_pred chhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002051 805 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883 (975)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i 883 (975)
.......+++.|+|||++.+. .++.++|||||||++|+|++|++||...+....+.++
T Consensus 154 ---------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~ 212 (283)
T cd07835 154 ---------------------RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRI 212 (283)
T ss_pred ---------------------cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 011223568899999988764 5688999999999999999999999887766555544
Q ss_pred HhcCC------------------CCC---------CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 884 LHKDL------------------KFP---------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 884 ~~~~~------------------~~p---------~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
.+... .++ ....++..+.++|.+||+.||.+||| +++++.||||
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~il~~~~~ 283 (283)
T cd07835 213 FRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRIS----AKAALQHPYF 283 (283)
T ss_pred HHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcC----HHHHhcCCCC
Confidence 33110 000 11346688999999999999999999 9999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-31 Score=294.16 Aligned_cols=231 Identities=21% Similarity=0.305 Sum_probs=186.6
Q ss_pred cCCCcccccccccCCceEEEEEEEeC-----CCeEEEEEEeccchh-------------------------ccccccCCe
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVM-------------------------LNRNKTKTH 716 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-----t~~~vAiK~l~~~~~-------------------------~~~~~~~~~ 716 (975)
..++|.+.+.||+|+||.||+|.+.. +++.||+|.++.... ........+
T Consensus 3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 82 (280)
T cd05049 3 QRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDP 82 (280)
T ss_pred ChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCC
Confidence 45689999999999999999998753 468899999865311 111124577
Q ss_pred EEEEEeccCCCCHHHHHhhCC------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEE
Q 002051 717 VCLITDYCPGGELFLLLDRQP------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 784 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~------------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vk 784 (975)
.|+||||++|++|.+++.... ...+++..+..++.||+.||.|||++|++||||||+|||++.++.+|
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~k 162 (280)
T cd05049 83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVK 162 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEE
Confidence 899999999999999997542 23578899999999999999999999999999999999999999999
Q ss_pred EeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHH
Q 002051 785 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 864 (975)
Q Consensus 785 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~el 864 (975)
|+|||++........ ........+++.|+|||++.+..++.++|||||||++|+|
T Consensus 163 l~d~g~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~ 217 (280)
T cd05049 163 IGDFGMSRDVYTTDY-------------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEI 217 (280)
T ss_pred ECCcccceecccCcc-------------------------eecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHH
Confidence 999999854321100 0111233467889999999999999999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 865 LY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 865 l~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
++ |..||.+.+.......+..+....+ ....+..+.+||.+||+.||++||+ +.|+++
T Consensus 218 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rp~----~~eil~ 276 (280)
T cd05049 218 FTYGKQPWYGLSNEEVIECITQGRLLQR-PRTCPSEVYDIMLGCWKRDPQQRIN----IKDIHE 276 (280)
T ss_pred HhcCCCCCCCCCHHHHHHHHHcCCcCCC-CCCCCHHHHHHHHHHcCCCcccCCC----HHHHHH
Confidence 98 9999988888777777765544332 3457889999999999999999999 777764
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-31 Score=291.96 Aligned_cols=227 Identities=23% Similarity=0.340 Sum_probs=188.6
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh------------------------ccccccCCeEEEEEec
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM------------------------LNRNKTKTHVCLITDY 723 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~------------------------~~~~~~~~~~~lV~Ey 723 (975)
..+|+++++||.|+||.||+|.+.. +..+|+|++..... .........+|+||||
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 4579999999999999999999987 88999999865421 1112256678999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
+++++|.+++.......++...+..++.||+.||.|||++||+|+||||+|||++.++.+||+|||.+.......
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~----- 158 (261)
T cd05148 84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV----- 158 (261)
T ss_pred cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCcc-----
Confidence 999999999987655678999999999999999999999999999999999999999999999999986542110
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFAN 882 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~~ 882 (975)
.......++..|+|||.+.+..++.++|||||||++|+|++ |..||.+.+..+.+..
T Consensus 159 ----------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~ 216 (261)
T cd05148 159 ----------------------YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQ 216 (261)
T ss_pred ----------------------ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHH
Confidence 00112345678999999998889999999999999999998 8999998887777777
Q ss_pred HHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 883 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 883 i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
+... ...+....++..+.++|.+||+.||.+||| +++|++
T Consensus 217 ~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt----~~~l~~ 256 (261)
T cd05148 217 ITAG-YRMPCPAKCPQEIYKIMLECWAAEPEDRPS----FKALRE 256 (261)
T ss_pred HHhC-CcCCCCCCCCHHHHHHHHHHcCCCchhCcC----HHHHHH
Confidence 6643 444555668899999999999999999999 666653
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.3e-31 Score=293.92 Aligned_cols=236 Identities=28% Similarity=0.449 Sum_probs=188.0
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-------------------------ccc--cccCCeEEEEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-------------------------LNR--NKTKTHVCLIT 721 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-------------------------~~~--~~~~~~~~lV~ 721 (975)
++|...++||.|++|.||+|.+..+++.||+|.+..... ... ......+|+||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 468899999999999999999999999999998864310 000 01345789999
Q ss_pred eccCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 722 DYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 722 Ey~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
||++|++|.+++.. .....+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~-- 158 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS-- 158 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccccc--
Confidence 99999999988754 22356899999999999999999999999999999999999999999999999998543210
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCC-----
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK----- 874 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~----- 874 (975)
......++..|+|||.+.+..++.++|||||||++|+|++|..||...
T Consensus 159 ---------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~ 211 (287)
T cd06621 159 ---------------------------LAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPL 211 (287)
T ss_pred ---------------------------ccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCC
Confidence 011345788899999999988999999999999999999999999765
Q ss_pred CHHHHHHHHHhcCC-CCCCC----CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcc
Q 002051 875 TRQKTFANILHKDL-KFPSS----TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 937 (975)
Q Consensus 875 ~~~~~~~~i~~~~~-~~p~~----~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~ 937 (975)
...+....+..... .++.. ...+..+.+||.+||.++|.+||| +.|++.||||+...-+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~eil~~~~~~~~~~~ 275 (287)
T cd06621 212 GPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPT----PWDMLEHPWIKAQMKK 275 (287)
T ss_pred ChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCC----HHHHHhCccccccccc
Confidence 22344444433221 11111 234678999999999999999999 9999999999776544
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.7e-31 Score=293.91 Aligned_cols=230 Identities=24% Similarity=0.436 Sum_probs=184.4
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-------------------------ccccccCCeEEEEEecc
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-------------------------LNRNKTKTHVCLITDYC 724 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-------------------------~~~~~~~~~~~lV~Ey~ 724 (975)
+|+++++||.|++|.||+|.+..+|+.||||.++.... ........++|+||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 58999999999999999999999999999998865321 11112567789999999
Q ss_pred CCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 725 PGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 725 ~ggsL~~~l~~~~-~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
+ ++|.+++.... ...+++..+..++.||+.||.|||++|++||||||+||+++.++.++|+|||++.......
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~----- 154 (284)
T cd07836 81 D-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV----- 154 (284)
T ss_pred C-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc-----
Confidence 6 58988887543 2468999999999999999999999999999999999999999999999999985432110
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 882 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~ 882 (975)
.......+++.|++||++.+. .++.++|||||||++|+|++|+.||.+.+..+.+..
T Consensus 155 ----------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~ 212 (284)
T cd07836 155 ----------------------NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLK 212 (284)
T ss_pred ----------------------cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Confidence 111223578899999998764 468899999999999999999999998776666555
Q ss_pred HHhcCC------------------CCCC---------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 883 ILHKDL------------------KFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 883 i~~~~~------------------~~p~---------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
+..... .++. ....+..++++|.+||+.||.+||+ +.++++||||
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~----~~~~l~~~~f 284 (284)
T cd07836 213 IFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRIS----AHDALQHPWF 284 (284)
T ss_pred HHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCC----HHHHhcCCCC
Confidence 443100 0010 0134678899999999999999999 9999999998
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.6e-31 Score=293.44 Aligned_cols=233 Identities=18% Similarity=0.244 Sum_probs=184.4
Q ss_pred ccCCCcccccccccCCceEEEEEEEeC-----CCeEEEEEEeccchh-------------------------ccccccCC
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVM-------------------------LNRNKTKT 715 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~-----t~~~vAiK~l~~~~~-------------------------~~~~~~~~ 715 (975)
+..++|++.+.||+|+||.||+|.++. ++..||+|.+..... ........
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~ 82 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 82 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 456789999999999999999998753 357899998754210 11112566
Q ss_pred eEEEEEeccCCCCHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEee
Q 002051 716 HVCLITDYCPGGELFLLLDRQP--------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTD 787 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~--------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~D 787 (975)
+.|+||||+++++|.+++.... ...++...+..++.|++.||.|||++|++|+||||+|||++.++.++|+|
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~d 162 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGD 162 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECC
Confidence 7899999999999999997532 12357788899999999999999999999999999999999999999999
Q ss_pred ccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-
Q 002051 788 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY- 866 (975)
Q Consensus 788 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~- 866 (975)
||++........ ........+++.|+|||.+.+..++.++|||||||++|+|++
T Consensus 163 fg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~ 217 (277)
T cd05062 163 FGMTRDIYETDY-------------------------YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 217 (277)
T ss_pred CCCccccCCcce-------------------------eecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcC
Confidence 999865321100 001112345788999999998889999999999999999998
Q ss_pred CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 867 GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 867 G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
|..||.+.+.......+...... +.....+..+.+++.+||+.||++||| +.+++++
T Consensus 218 ~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps----~~e~l~~ 274 (277)
T cd05062 218 AEQPYQGMSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPS----FLEIISS 274 (277)
T ss_pred CCCCCCCCCHHHHHHHHHcCCcC-CCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHHH
Confidence 79999988877777666654432 223456788999999999999999999 8887754
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-31 Score=303.92 Aligned_cols=236 Identities=26% Similarity=0.392 Sum_probs=182.6
Q ss_pred ccccCCCcccccccccCCceEEEEEEEe-----CCCeEEEEEEeccchh-------------c----c----------cc
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVM-------------L----N----------RN 711 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~-----~t~~~vAiK~l~~~~~-------------~----~----------~~ 711 (975)
+.+..++|++.+.||.|+||.||+|.+. .+++.||||+++.... + . ..
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (343)
T cd05103 2 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT 81 (343)
T ss_pred cccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceee
Confidence 3456779999999999999999999853 4678999999864210 0 0 00
Q ss_pred ccCCeEEEEEeccCCCCHHHHHhhCC------------------------------------------------------
Q 002051 712 KTKTHVCLITDYCPGGELFLLLDRQP------------------------------------------------------ 737 (975)
Q Consensus 712 ~~~~~~~lV~Ey~~ggsL~~~l~~~~------------------------------------------------------ 737 (975)
.....+|+|||||++|+|.+++....
T Consensus 82 ~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (343)
T cd05103 82 KPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV 161 (343)
T ss_pred cCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence 12356789999999999999986521
Q ss_pred -----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcch
Q 002051 738 -----------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 806 (975)
Q Consensus 738 -----------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 806 (975)
...++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~------- 234 (343)
T cd05103 162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD------- 234 (343)
T ss_pred hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcc-------
Confidence 12367788889999999999999999999999999999999999999999999865321110
Q ss_pred hhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHh
Q 002051 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILH 885 (975)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~~i~~ 885 (975)
........+++.|+|||.+.+..++.++|||||||++|+|++ |..||........+...+.
T Consensus 235 ------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 296 (343)
T cd05103 235 ------------------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 296 (343)
T ss_pred ------------------hhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHh
Confidence 001112345678999999998889999999999999999996 9999987554443444443
Q ss_pred cCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 886 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 886 ~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
.....+.+...++.+.+++.+||+.||.+||| +.+|++|
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps----~~eil~~ 335 (343)
T cd05103 297 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT----FSELVEH 335 (343)
T ss_pred ccCCCCCCCCCCHHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence 33333334456788999999999999999999 8888765
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.4e-31 Score=290.92 Aligned_cols=231 Identities=23% Similarity=0.348 Sum_probs=187.7
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhcc----------------------ccccCCeEEEEEe
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN----------------------RNKTKTHVCLITD 722 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~----------------------~~~~~~~~~lV~E 722 (975)
.+..++|+++++||+|+||.||+|..+ +++.||+|.+....... .......+|+|||
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e 80 (260)
T cd05067 2 EVPRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITE 80 (260)
T ss_pred ccchHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEE
Confidence 456778999999999999999999864 56789999887532100 0013556899999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
|+.+++|.+++.......++...+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~---- 156 (260)
T cd05067 81 YMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNE---- 156 (260)
T ss_pred cCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCC----
Confidence 9999999999987655678999999999999999999999999999999999999999999999999985533110
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFA 881 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~ 881 (975)
........++..|+|||++.+..++.++||||||+++|+|++ |++||.+.+......
T Consensus 157 ----------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~ 214 (260)
T cd05067 157 ----------------------YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQ 214 (260)
T ss_pred ----------------------cccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHH
Confidence 001122345778999999998889999999999999999998 999998887766666
Q ss_pred HHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 882 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 882 ~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
.+.. ....+.....+..+.++|.+||..+|++||| +++++.
T Consensus 215 ~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~l~~ 255 (260)
T cd05067 215 NLER-GYRMPRPDNCPEELYELMRLCWKEKPEERPT----FEYLRS 255 (260)
T ss_pred HHHc-CCCCCCCCCCCHHHHHHHHHHccCChhhCCC----HHHHHH
Confidence 5544 3344545567889999999999999999999 777754
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-31 Score=302.81 Aligned_cols=237 Identities=27% Similarity=0.448 Sum_probs=186.5
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------c------------cc----cccCCeEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------L------------NR----NKTKTHVC 718 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------~------------~~----~~~~~~~~ 718 (975)
.+|++.+.||.|+||.||+|.++.+|+.||+|++..... + .. .....++|
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 579999999999999999999999999999998865310 0 00 01345789
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
+||||+ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 85 lv~e~~-~~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 161 (334)
T cd07855 85 VVMDLM-ESDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSP 161 (334)
T ss_pred EEEehh-hhhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccC
Confidence 999999 56999988653 459999999999999999999999999999999999999999999999999986543111
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
.. .........|+..|+|||.+.+ ..++.++|||||||++|+|++|++||.+.+..
T Consensus 162 ~~-----------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~ 218 (334)
T cd07855 162 TE-----------------------HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYV 218 (334)
T ss_pred cC-----------------------CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChH
Confidence 00 0011123578999999999866 45788999999999999999999999877655
Q ss_pred HHHHHHHhcCC--------------------CCCC---------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 878 KTFANILHKDL--------------------KFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 878 ~~~~~i~~~~~--------------------~~p~---------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
..+..+..... .++. ....+..+.+||++||+.+|.+||| +.+++.|
T Consensus 219 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~~l~~ 294 (334)
T cd07855 219 HQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERIT----VEQALQH 294 (334)
T ss_pred HHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcC----HHHHHhC
Confidence 44433222100 0000 1235788999999999999999999 9999999
Q ss_pred CCccCCC
Q 002051 929 PFFKGVN 935 (975)
Q Consensus 929 p~f~~~~ 935 (975)
|||....
T Consensus 295 ~~~~~~~ 301 (334)
T cd07855 295 PFLAQYH 301 (334)
T ss_pred hhhhhcc
Confidence 9998543
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.8e-31 Score=293.33 Aligned_cols=231 Identities=21% Similarity=0.312 Sum_probs=182.7
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCe----EEEEEEeccchhc-------------ccc-----------ccCCeE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVML-------------NRN-----------KTKTHV 717 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~----~vAiK~l~~~~~~-------------~~~-----------~~~~~~ 717 (975)
+...+|+++++||.|+||+||+|.+..+++ .||+|++...... ... ......
T Consensus 4 l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 83 (279)
T cd05109 4 LKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTV 83 (279)
T ss_pred cchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCc
Confidence 556789999999999999999999877776 4899987643110 000 023456
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
+++|||+++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 84 ~l~~~~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~ 162 (279)
T cd05109 84 QLVTQLMPYGCLLDYVREN-KDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDID 162 (279)
T ss_pred EEEEEcCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecccc
Confidence 7999999999999998764 346899999999999999999999999999999999999999999999999998664321
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 876 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~ 876 (975)
... .......+++.|+|||.+.+..++.++|||||||++|+|++ |..||.....
T Consensus 163 ~~~-------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~ 217 (279)
T cd05109 163 ETE-------------------------YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA 217 (279)
T ss_pred cce-------------------------eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 100 00111234678999999998889999999999999999998 9999987666
Q ss_pred HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 877 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 877 ~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
...... +......+.....+..+.+++.+||..||++||+ +.+++.
T Consensus 218 ~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~----~~~l~~ 263 (279)
T cd05109 218 REIPDL-LEKGERLPQPPICTIDVYMIMVKCWMIDSECRPR----FRELVD 263 (279)
T ss_pred HHHHHH-HHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 555443 3333344445567889999999999999999999 777763
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.1e-31 Score=294.66 Aligned_cols=231 Identities=27% Similarity=0.397 Sum_probs=179.3
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-------------------------ccccccCCeEEEEEe
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-------------------------LNRNKTKTHVCLITD 722 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-------------------------~~~~~~~~~~~lV~E 722 (975)
.++|++++.||+|+||.||+|.+..+++.||+|.+..... ........+.|+|||
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 83 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE 83 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence 3679999999999999999999999999999999864310 111125668899999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
|+ +++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||+++......
T Consensus 84 ~~-~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~---- 157 (291)
T cd07870 84 YM-HTDLAQYMIQH-PGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS---- 157 (291)
T ss_pred cc-cCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCC----
Confidence 99 57888777653 2457888999999999999999999999999999999999999999999999985432110
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCCH-HHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTR-QKTF 880 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~~-~~~~ 880 (975)
.......+++.|+|||.+.+. .++.++|||||||++|+|++|..||.+... .+.+
T Consensus 158 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~ 214 (291)
T cd07870 158 -----------------------QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQL 214 (291)
T ss_pred -----------------------CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHH
Confidence 011223578899999998764 578899999999999999999999976543 2222
Q ss_pred HHHHhcC---------------------CC--CC-------CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCC
Q 002051 881 ANILHKD---------------------LK--FP-------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930 (975)
Q Consensus 881 ~~i~~~~---------------------~~--~p-------~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~ 930 (975)
..+.... .. .+ .....+..+.+||.+||..||.+||| +.+++.|||
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t----~~~~l~h~~ 290 (291)
T cd07870 215 EKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRIS----AQDALLHPY 290 (291)
T ss_pred HHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcC----HHHHhcCCC
Confidence 2221100 00 00 00123568899999999999999999 999999999
Q ss_pred c
Q 002051 931 F 931 (975)
Q Consensus 931 f 931 (975)
|
T Consensus 291 ~ 291 (291)
T cd07870 291 F 291 (291)
T ss_pred C
Confidence 8
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.6e-31 Score=293.12 Aligned_cols=233 Identities=20% Similarity=0.263 Sum_probs=186.9
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCC-----CeEEEEEEeccch-------------------------hccccccC
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGV-------------------------MLNRNKTK 714 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t-----~~~vAiK~l~~~~-------------------------~~~~~~~~ 714 (975)
.+..++|.+.+.||.|+||.||++.++.. +..||+|.+.... +.......
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 81 (277)
T cd05032 2 ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTG 81 (277)
T ss_pred ccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCC
Confidence 46678999999999999999999998754 3889999976431 11112256
Q ss_pred CeEEEEEeccCCCCHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEe
Q 002051 715 THVCLITDYCPGGELFLLLDRQP--------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLT 786 (975)
Q Consensus 715 ~~~~lV~Ey~~ggsL~~~l~~~~--------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~ 786 (975)
.+.|+||||+++++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+
T Consensus 82 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 82 QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEEC
Confidence 77899999999999999997532 2246788999999999999999999999999999999999999999999
Q ss_pred eccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh
Q 002051 787 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY 866 (975)
Q Consensus 787 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~ 866 (975)
|||+++....... ........++..|+|||.+.+..++.++|||||||++|++++
T Consensus 162 dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t 216 (277)
T cd05032 162 DFGMTRDIYETDY-------------------------YRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMAT 216 (277)
T ss_pred CcccchhhccCcc-------------------------cccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhc
Confidence 9999865321100 011223456788999999988889999999999999999998
Q ss_pred -CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 867 -GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 867 -G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
|..||.+.+.......+... ...+.+..++..+.+||.+||+.+|++||| +.+|+.
T Consensus 217 ~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~l~~ 273 (277)
T cd05032 217 LAEQPYQGLSNEEVLKFVIDG-GHLDLPENCPDKLLELMRMCWQYNPKMRPT----FLEIVS 273 (277)
T ss_pred cCCCCCccCCHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHcCCChhhCCC----HHHHHH
Confidence 99999888877776666533 233334456889999999999999999999 777764
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.2e-33 Score=308.02 Aligned_cols=230 Identities=23% Similarity=0.291 Sum_probs=185.0
Q ss_pred ccccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCC
Q 002051 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKT 715 (975)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~ 715 (975)
..|.|..+.+.+...||+|.||+||+|++-. .||||+++-... +... .+.
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~-~~p 460 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGAC-MNP 460 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhh-cCC
Confidence 4567888899999999999999999999955 499999864321 0111 233
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
.+.||+-+|+|.+|+.++... ...|.....+.|++||++|+.|||.++|||||||..||++.++++|||+|||++..-.
T Consensus 461 ~~AIiTqwCeGsSLY~hlHv~-etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~ 539 (678)
T KOG0193|consen 461 PLAIITQWCEGSSLYTHLHVQ-ETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKT 539 (678)
T ss_pred ceeeeehhccCchhhhhccch-hhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeee
Confidence 448999999999999999764 3679999999999999999999999999999999999999999999999999984421
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC---CCCCChhHHHHHHHHHHHHHhCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPFR 872 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~---~~~~~k~DIWSLG~il~ell~G~~Pf~ 872 (975)
- ...........|...|||||+++. .+|++.+|||||||++|||++|..||.
T Consensus 540 ~-------------------------w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys 594 (678)
T KOG0193|consen 540 R-------------------------WSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS 594 (678)
T ss_pred e-------------------------eccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC
Confidence 0 011112234568889999999975 468899999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCCCCC---CCCCCcHHHHHHHHHhcccCccccCCChhh
Q 002051 873 GKTRQKTFANILHKDLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 921 (975)
Q Consensus 873 ~~~~~~~~~~i~~~~~~~p---~~~~~s~~~~~li~~~L~~dP~~R~t~~~~ 921 (975)
..+...++..+-++.+... ....++.++++|+..||.+++++||.+...
T Consensus 595 i~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~i 646 (678)
T KOG0193|consen 595 IQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQL 646 (678)
T ss_pred CCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHH
Confidence 8777777777767644322 224567799999999999999999994433
|
|
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-31 Score=307.26 Aligned_cols=231 Identities=24% Similarity=0.330 Sum_probs=183.4
Q ss_pred cccccCCCcccccccccCCceEEEEEEEeCC-----CeEEEEEEeccch--------------------------hcccc
Q 002051 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGV--------------------------MLNRN 711 (975)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t-----~~~vAiK~l~~~~--------------------------~~~~~ 711 (975)
.+.++.++|++++.||.|+||.||+|.+... +..||||++.... +....
T Consensus 31 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~ 110 (400)
T cd05105 31 RWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGAC 110 (400)
T ss_pred ceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEE
Confidence 3456778999999999999999999987533 3579999986421 01111
Q ss_pred ccCCeEEEEEeccCCCCHHHHHhhCC------------------------------------------------------
Q 002051 712 KTKTHVCLITDYCPGGELFLLLDRQP------------------------------------------------------ 737 (975)
Q Consensus 712 ~~~~~~~lV~Ey~~ggsL~~~l~~~~------------------------------------------------------ 737 (975)
.....+|||||||++|+|.+++....
T Consensus 111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (400)
T cd05105 111 TKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVP 190 (400)
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccch
Confidence 25677899999999999999886421
Q ss_pred ----------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE
Q 002051 738 ----------------------------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL 777 (975)
Q Consensus 738 ----------------------------------------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl 777 (975)
...+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill 270 (400)
T cd05105 191 MLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLL 270 (400)
T ss_pred hhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEE
Confidence 1247788889999999999999999999999999999999
Q ss_pred ecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHH
Q 002051 778 QGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWAL 857 (975)
Q Consensus 778 ~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSL 857 (975)
+.++.+||+|||+++....... ........+++.|+|||++.+..++.++|||||
T Consensus 271 ~~~~~~kL~DfGla~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSl 325 (400)
T cd05105 271 AQGKIVKICDFGLARDIMHDSN-------------------------YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSY 325 (400)
T ss_pred eCCCEEEEEeCCcceecccccc-------------------------ccccCCcCCCcceEChhhhcCCCCCchhhHHHH
Confidence 9999999999999865421110 011223457788999999999889999999999
Q ss_pred HHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCC
Q 002051 858 GILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS 918 (975)
Q Consensus 858 G~il~ell~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~ 918 (975)
||++|+|++ |..||........+...+.....++....++..+.++|.+||+.||++|||+
T Consensus 326 Gvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 387 (400)
T cd05105 326 GILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSF 387 (400)
T ss_pred HHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCH
Confidence 999999996 9999987665555555555555555556678899999999999999999993
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.8e-31 Score=300.93 Aligned_cols=236 Identities=23% Similarity=0.351 Sum_probs=183.3
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc------------c------------cc------------
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML------------N------------RN------------ 711 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~------------~------------~~------------ 711 (975)
.++|.+.+.||.|+||.||+|.++.+++.||+|.+...... . ..
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 46899999999999999999999999999999987543110 0 00
Q ss_pred --ccCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-CCcEEEeec
Q 002051 712 --KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDF 788 (975)
Q Consensus 712 --~~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~-~g~vkL~DF 788 (975)
....++|+||||++ ++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+||
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~df 159 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDF 159 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCc
Confidence 01246899999995 699888864 45899999999999999999999999999999999999974 557899999
Q ss_pred cCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhC
Q 002051 789 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYG 867 (975)
Q Consensus 789 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G 867 (975)
|.+........ .........|+..|+|||.+.+ ..++.++|||||||++|+|++|
T Consensus 160 g~~~~~~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g 215 (342)
T cd07854 160 GLARIVDPHYS------------------------HKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG 215 (342)
T ss_pred ccceecCCccc------------------------cccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhC
Confidence 99865421100 0001122357889999998754 5678899999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhcCC----------------------CCC------CCCCCcHHHHHHHHHhcccCccccCCCh
Q 002051 868 YTPFRGKTRQKTFANILHKDL----------------------KFP------SSTPTSLHAKQLMYRLLHRDPKSRLGSH 919 (975)
Q Consensus 868 ~~Pf~~~~~~~~~~~i~~~~~----------------------~~p------~~~~~s~~~~~li~~~L~~dP~~R~t~~ 919 (975)
+.||.+.+.......+..... ..+ .....+.++.+||.+||+.||.+|||
T Consensus 216 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-- 293 (342)
T cd07854 216 KPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLT-- 293 (342)
T ss_pred CCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccC--
Confidence 999988776555544432110 000 01246778999999999999999999
Q ss_pred hhHHHHHcCCCccCCC
Q 002051 920 EGANEIKKHPFFKGVN 935 (975)
Q Consensus 920 ~~~~elL~Hp~f~~~~ 935 (975)
+.++|.||||+.+.
T Consensus 294 --~~ell~h~~~~~~~ 307 (342)
T cd07854 294 --AEEALMHPYMSCYS 307 (342)
T ss_pred --HHHHhCCCcccccc
Confidence 99999999998653
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.9e-31 Score=287.72 Aligned_cols=228 Identities=25% Similarity=0.385 Sum_probs=184.3
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------ccccccCCeEEEEEec
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------LNRNKTKTHVCLITDY 723 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------~~~~~~~~~~~lV~Ey 723 (975)
+.++|++++.||+|+||.||++..+. +..+|+|.+..... .........+|+||||
T Consensus 2 ~~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~ 80 (256)
T cd05114 2 NPSELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEF 80 (256)
T ss_pred CHHHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEc
Confidence 34679999999999999999998754 56799998764321 1122256678999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
+++|+|.+++.... +.+++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~----- 154 (256)
T cd05114 81 MENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDE----- 154 (256)
T ss_pred CCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCc-----
Confidence 99999999987542 458999999999999999999999999999999999999999999999999886432110
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFAN 882 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~~ 882 (975)
........++..|+|||++.+..++.++||||||+++|+|++ |+.||...+..+.+..
T Consensus 155 ---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~ 213 (256)
T cd05114 155 ---------------------YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEM 213 (256)
T ss_pred ---------------------eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 001112245668999999998889999999999999999999 9999998888888777
Q ss_pred HHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 883 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 883 i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
+..+.. ...+...+..+.+++.+||+.+|++||+ +++|++
T Consensus 214 i~~~~~-~~~~~~~~~~~~~li~~c~~~~p~~Rps----~~~l~~ 253 (256)
T cd05114 214 ISRGFR-LYRPKLASMTVYEVMYSCWHEKPEGRPT----FAELLR 253 (256)
T ss_pred HHCCCC-CCCCCCCCHHHHHHHHHHccCCcccCcC----HHHHHH
Confidence 766542 2223346788999999999999999999 888764
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.8e-31 Score=288.61 Aligned_cols=230 Identities=24% Similarity=0.353 Sum_probs=184.8
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------cccc-----------ccCCeEEEEEec
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------LNRN-----------KTKTHVCLITDY 723 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------~~~~-----------~~~~~~~lV~Ey 723 (975)
+..++|.+..+||.|+||.||+|.+..++ .+|+|.+..... +... ......|+||||
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~-~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~ 81 (260)
T cd05069 3 IPRESLRLDVKLGQGCFGEVWMGTWNGTT-KVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEF 81 (260)
T ss_pred CChHHeeeeeeecCcCCCeEEEEEEcCCc-eEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEc
Confidence 45568999999999999999999886654 589998764321 0000 134567899999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
+.+++|.+++.......++...+..++.||+.||.|||+.|++|+||||+|||++.++.++|+|||.+.......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~----- 156 (260)
T cd05069 82 MGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE----- 156 (260)
T ss_pred CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCc-----
Confidence 999999999987555568999999999999999999999999999999999999999999999999986542110
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFAN 882 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~~ 882 (975)
........++..|+|||.+.+..++.++|||||||++|+|++ |..||.+.........
T Consensus 157 ---------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~ 215 (260)
T cd05069 157 ---------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQ 215 (260)
T ss_pred ---------------------ccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 001112345678999999998889999999999999999998 9999998877777666
Q ss_pred HHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 883 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 883 i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
+... ...+.....+..+.+++++||.+||.+||+ ++++++
T Consensus 216 ~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~i~~ 255 (260)
T cd05069 216 VERG-YRMPCPQGCPESLHELMKLCWKKDPDERPT----FEYIQS 255 (260)
T ss_pred HHcC-CCCCCCcccCHHHHHHHHHHccCCcccCcC----HHHHHH
Confidence 6543 333444567889999999999999999999 777653
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=4e-31 Score=288.04 Aligned_cols=232 Identities=25% Similarity=0.375 Sum_probs=188.3
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-----------------hc------------ccc--ccCCeE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-----------------ML------------NRN--KTKTHV 717 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-----------------~~------------~~~--~~~~~~ 717 (975)
.+|.+.+.||+|+||.||+|.+..+++.||+|.+.... ++ ... .....+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 47999999999999999999999999999999874210 00 000 023568
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
++||||+++++|.+++... ..+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 159 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAY--GALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTI 159 (264)
T ss_pred EEEEEeCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccc
Confidence 8999999999999999764 45899999999999999999999999999999999999999999999999998654211
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
.. .........|+..|+|||++.+..++.++|+|||||++|+|++|+.||......
T Consensus 160 ~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 215 (264)
T cd06653 160 CM------------------------SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM 215 (264)
T ss_pred cc------------------------cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH
Confidence 00 000112356889999999999888899999999999999999999999887766
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
....++.........+...+..+.++|.+||+ +|..||+ +.+++.|||.
T Consensus 216 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~----~~~~~~~~~~ 264 (264)
T cd06653 216 AAIFKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPT----AEFLLRHPFV 264 (264)
T ss_pred HHHHHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCcc----HHHHhcCCCC
Confidence 66665554433333344578899999999999 5799999 9999999984
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.4e-31 Score=288.49 Aligned_cols=227 Identities=22% Similarity=0.371 Sum_probs=183.2
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------ccccccCCeEEEEEecc
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------LNRNKTKTHVCLITDYC 724 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------~~~~~~~~~~~lV~Ey~ 724 (975)
..+|++.+.||+|+||.||++.++ ++..+|+|++.+... ........+.|+||||+
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYM 81 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecC
Confidence 457999999999999999999885 466899999865321 11112556789999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCc
Q 002051 725 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 804 (975)
Q Consensus 725 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~ 804 (975)
+|++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~------ 154 (256)
T cd05059 82 ANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQ------ 154 (256)
T ss_pred CCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceeccccc------
Confidence 9999999997643 368999999999999999999999999999999999999999999999999885432100
Q ss_pred chhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 002051 805 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANI 883 (975)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~~i 883 (975)
........++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+....+
T Consensus 155 --------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~ 214 (256)
T cd05059 155 --------------------YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESV 214 (256)
T ss_pred --------------------ccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Confidence 000111224567999999998889999999999999999998 89999887776666655
Q ss_pred HhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 884 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 884 ~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
... ...+.+...+..+.+++.+||..+|++||| +.++++
T Consensus 215 ~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt----~~~~l~ 253 (256)
T cd05059 215 SAG-YRLYRPKLAPTEVYTIMYSCWHEKPEDRPA----FKKLLS 253 (256)
T ss_pred HcC-CcCCCCCCCCHHHHHHHHHHhcCChhhCcC----HHHHHH
Confidence 443 333444557899999999999999999999 888775
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.2e-31 Score=292.83 Aligned_cols=231 Identities=22% Similarity=0.330 Sum_probs=185.5
Q ss_pred ccCCCcccccccccCCceEEEEEEEe-----CCCeEEEEEEeccch------------------------hccccccCCe
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGV------------------------MLNRNKTKTH 716 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~-----~t~~~vAiK~l~~~~------------------------~~~~~~~~~~ 716 (975)
|...+|.+.+.||+|+||.||++... .++..+|+|.+.... +........+
T Consensus 2 ~~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (288)
T cd05093 2 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 81 (288)
T ss_pred CchHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence 45668999999999999999999863 345679999886431 0111225678
Q ss_pred EEEEEeccCCCCHHHHHhhCC-----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEE
Q 002051 717 VCLITDYCPGGELFLLLDRQP-----------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSL 785 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~-----------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL 785 (975)
+|+||||+++++|.+++.... ...+++..+..++.||+.||+|||++|++||||||+|||++.++.+||
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 82 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEe
Confidence 899999999999999997532 124899999999999999999999999999999999999999999999
Q ss_pred eeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHH
Q 002051 786 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 865 (975)
Q Consensus 786 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell 865 (975)
+|||++........ ........+++.|+|||.+.+..++.++|||||||++|+|+
T Consensus 162 ~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~ 216 (288)
T cd05093 162 GDFGMSRDVYSTDY-------------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIF 216 (288)
T ss_pred ccCCccccccCCce-------------------------eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHH
Confidence 99999864321100 01112334678899999999888999999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 866 Y-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 866 ~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
+ |.+||...........+..+... +.....+..+.+|+.+||+.||.+||| +.+++
T Consensus 217 t~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~v~ 273 (288)
T cd05093 217 TYGKQPWYQLSNNEVIECITQGRVL-QRPRTCPKEVYDLMLGCWQREPHMRLN----IKEIH 273 (288)
T ss_pred hCCCCCCCCCCHHHHHHHHHcCCcC-CCCCCCCHHHHHHHHHHccCChhhCCC----HHHHH
Confidence 8 99999988887777777665432 233457889999999999999999999 66663
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.1e-31 Score=286.53 Aligned_cols=230 Identities=30% Similarity=0.545 Sum_probs=193.6
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEEEEEec
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCLITDY 723 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~lV~Ey 723 (975)
+|.+.+.||.|+||.||++.+..+++.||+|.+..... .........+++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 58899999999999999999999999999999865321 1111245788999999
Q ss_pred cCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 724 CPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 724 ~~ggsL~~~l~~~~--~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
+++++|.+++.... ...++...+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~--- 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV--- 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCc---
Confidence 99999999997643 3679999999999999999999999999999999999999999999999999885543110
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~ 881 (975)
.......|++.|+|||.+.+..++.++|+||+|+++|+|++|..||...+......
T Consensus 158 ------------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~ 213 (258)
T cd08215 158 ------------------------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELAL 213 (258)
T ss_pred ------------------------ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHH
Confidence 11223468899999999998889999999999999999999999998887777666
Q ss_pred HHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 882 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 882 ~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
........ +.+...+..+.++|.+||..+|++||| +.++|.||||
T Consensus 214 ~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~ll~~~~~ 258 (258)
T cd08215 214 KILKGQYP-PIPSQYSSELRNLVSSLLQKDPEERPS----IAQILQSPFI 258 (258)
T ss_pred HHhcCCCC-CCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHhcCCCC
Confidence 66654432 223357889999999999999999999 9999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.7e-31 Score=295.71 Aligned_cols=234 Identities=23% Similarity=0.332 Sum_probs=187.8
Q ss_pred cccCCCcccccccccCCceEEEEEEEe-----CCCeEEEEEEeccchh--------------------------cccccc
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVM--------------------------LNRNKT 713 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~-----~t~~~vAiK~l~~~~~--------------------------~~~~~~ 713 (975)
.+..++|.+.+.||+|+||.||++.+. .++..||+|.++.... ......
T Consensus 31 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 110 (302)
T cd05055 31 EFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTI 110 (302)
T ss_pred cccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEec
Confidence 456678999999999999999999863 3456899998764310 011124
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 714 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 714 ~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
.+.+|+||||+++|+|.+++.......+++..+..++.||+.||.|||+++|+|+||||+|||++.++.++|+|||++..
T Consensus 111 ~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~ 190 (302)
T cd05055 111 GGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARD 190 (302)
T ss_pred CCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCccccc
Confidence 56789999999999999999765444589999999999999999999999999999999999999999999999999865
Q ss_pred cCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCC
Q 002051 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFR 872 (975)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~ 872 (975)
...... ........++..|+|||.+.+..++.++|||||||++|+|++ |..||.
T Consensus 191 ~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~ 245 (302)
T cd05055 191 IMNDSN-------------------------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYP 245 (302)
T ss_pred ccCCCc-------------------------eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcC
Confidence 431110 001122346788999999999889999999999999999998 999998
Q ss_pred CCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 873 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 873 ~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
.......+..........+.....+..+.+|+.+||.++|++||| +.+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt----~~ell~ 296 (302)
T cd05055 246 GMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPT----FKQIVQ 296 (302)
T ss_pred CCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcC----HHHHHH
Confidence 877666666665555444444557889999999999999999999 777754
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.7e-31 Score=287.74 Aligned_cols=233 Identities=30% Similarity=0.524 Sum_probs=187.7
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc--------------------------cccccCCeEEEEEec
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--------------------------NRNKTKTHVCLITDY 723 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~--------------------------~~~~~~~~~~lV~Ey 723 (975)
+|++.+.||+|+||.||++.+..+++.||+|.+...... ........+++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 588999999999999999999999999999998754221 111246778999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
+++++|.+++... ..+++..++.++.|++.||.|||++||+|+||+|+||+++.++.+||+|||++..........
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~-- 156 (264)
T cd06626 81 CSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM-- 156 (264)
T ss_pred CCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc--
Confidence 9999999999764 458899999999999999999999999999999999999999999999999986643221100
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC---CCChhHHHHHHHHHHHHHhCCCCCCCCC-HHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG---HTSAVDWWALGILLYEMLYGYTPFRGKT-RQKT 879 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~---~~~k~DIWSLG~il~ell~G~~Pf~~~~-~~~~ 879 (975)
........+++.|+|||.+.+.. ++.++|||||||++|++++|+.||.... ....
T Consensus 157 ---------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~ 215 (264)
T cd06626 157 ---------------------GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQI 215 (264)
T ss_pred ---------------------cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHH
Confidence 00012356788999999998766 7889999999999999999999997653 3333
Q ss_pred HHHHHhc-CCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 880 FANILHK-DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 880 ~~~i~~~-~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
...+... ...+|....++..+.+||.+||+.+|.+||| +.+++.|||+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~----~~~i~~~~~~ 264 (264)
T cd06626 216 MFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPT----ASELLQHPFV 264 (264)
T ss_pred HHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCC----HHHHhcCCCC
Confidence 3333322 2234444456889999999999999999999 9999999996
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.1e-31 Score=300.21 Aligned_cols=236 Identities=25% Similarity=0.401 Sum_probs=189.9
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccC-----CeEE
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTK-----THVC 718 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~-----~~~~ 718 (975)
+|++.+.||.|+||.||+|++..+++.||||.+..... ....... .++|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 58999999999999999999999999999998765320 0001122 3789
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
+||||++ ++|.+++... ..+++..++.++.||+.||.|||++||+|+||||+|||++.++.++|+|||++.......
T Consensus 81 lv~e~~~-~~l~~~l~~~--~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~ 157 (330)
T cd07834 81 IVTELME-TDLHKVIKSP--QPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDE 157 (330)
T ss_pred EEecchh-hhHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccc
Confidence 9999995 5899998764 479999999999999999999999999999999999999999999999999986543211
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
.. ........+++.|+|||++.+. .++.++|+|||||++|+|++|.+||.+.+..
T Consensus 158 ~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~ 213 (330)
T cd07834 158 DE------------------------KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI 213 (330)
T ss_pred cc------------------------cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH
Confidence 00 0112234678999999999887 7899999999999999999999999988877
Q ss_pred HHHHHHHhcCCCCC-----------------------------CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 878 KTFANILHKDLKFP-----------------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 878 ~~~~~i~~~~~~~p-----------------------------~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
+.+..+.......+ .....+..+.+||.+||+++|.+||| +.+++.|
T Consensus 214 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~ll~~ 289 (330)
T cd07834 214 DQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRIT----ADEALAH 289 (330)
T ss_pred HHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCC----HHHHHhC
Confidence 76666554211100 01235778999999999999999999 9999999
Q ss_pred CCccCCCc
Q 002051 929 PFFKGVNW 936 (975)
Q Consensus 929 p~f~~~~~ 936 (975)
|||+++.-
T Consensus 290 ~~~~~~~~ 297 (330)
T cd07834 290 PYLAQLHD 297 (330)
T ss_pred ccHHhhcc
Confidence 99987533
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.8e-31 Score=301.04 Aligned_cols=229 Identities=27% Similarity=0.444 Sum_probs=186.4
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccC------C
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTK------T 715 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~------~ 715 (975)
.++|.+.+.||.|+||.||+|++..+++.||+|++..... ....... .
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ 93 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence 5679999999999999999999999999999998764210 0000111 3
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
++|+|+||+ +++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++....
T Consensus 94 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~ 169 (343)
T cd07851 94 DVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTD 169 (343)
T ss_pred cEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccc
Confidence 489999999 7899999875 469999999999999999999999999999999999999999999999999985432
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 874 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~ 874 (975)
. ......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.
T Consensus 170 ~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~ 219 (343)
T cd07851 170 D------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGS 219 (343)
T ss_pred c------------------------------cccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 1 1123467889999999865 36788999999999999999999999887
Q ss_pred CHHHHHHHHHhcCCCCC-----------------------------CCCCCcHHHHHHHHHhcccCccccCCChhhHHHH
Q 002051 875 TRQKTFANILHKDLKFP-----------------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 925 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~~p-----------------------------~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~el 925 (975)
+....+..+.......+ .....+..+.+||.+||+.||.+||| +.+|
T Consensus 220 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt----~~el 295 (343)
T cd07851 220 DHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRIT----AAEA 295 (343)
T ss_pred ChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCC----HHHH
Confidence 77666665544211100 01235788999999999999999999 9999
Q ss_pred HcCCCccCC
Q 002051 926 KKHPFFKGV 934 (975)
Q Consensus 926 L~Hp~f~~~ 934 (975)
+.||||...
T Consensus 296 l~h~~~~~~ 304 (343)
T cd07851 296 LAHPYLAEY 304 (343)
T ss_pred hcCCCcccc
Confidence 999999854
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-31 Score=286.81 Aligned_cols=214 Identities=33% Similarity=0.509 Sum_probs=173.5
Q ss_pred CCceEEEEEEEeCCCeEEEEEEeccchh-------------------ccccccCCeEEEEEeccCCCCHHHHHhhCCCCC
Q 002051 680 GDTGSVHLVELCGSGQYFAMKAMDKGVM-------------------LNRNKTKTHVCLITDYCPGGELFLLLDRQPTKV 740 (975)
Q Consensus 680 G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-------------------~~~~~~~~~~~lV~Ey~~ggsL~~~l~~~~~~~ 740 (975)
|.||.||+|+++.+++.||+|.+.+... ........++|+||||++||+|.+++... ..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~ 81 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSEYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKF--LN 81 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhhhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHh--cC
Confidence 8999999999999999999999876421 11122567899999999999999999764 45
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCccc
Q 002051 741 LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVF 820 (975)
Q Consensus 741 l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (975)
+++..+..++.|++.||.|||++||+||||||+||+++.++.++++|||.+......
T Consensus 82 l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----------------------- 138 (237)
T cd05576 82 IPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----------------------- 138 (237)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc-----------------------
Confidence 899999999999999999999999999999999999999999999999987443210
Q ss_pred ccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHH
Q 002051 821 MAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHA 900 (975)
Q Consensus 821 ~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~ 900 (975)
.....++..|+|||.+.+..++.++|+||+||++|+|++|..||...... ......+..+..++..+
T Consensus 139 -------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 205 (237)
T cd05576 139 -------CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG------INTHTTLNIPEWVSEEA 205 (237)
T ss_pred -------cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh------cccccccCCcccCCHHH
Confidence 11234567899999998888999999999999999999999988643211 11111122233478899
Q ss_pred HHHHHHhcccCccccCCCh-hhHHHHHcCCCc
Q 002051 901 KQLMYRLLHRDPKSRLGSH-EGANEIKKHPFF 931 (975)
Q Consensus 901 ~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f 931 (975)
.+||.+||+.||++|+++. ..++++++||||
T Consensus 206 ~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 206 RSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred HHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 9999999999999999842 236999999998
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.4e-31 Score=288.05 Aligned_cols=230 Identities=23% Similarity=0.330 Sum_probs=186.3
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------ccccccCCeEEEEE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------~~~~~~~~~~~lV~ 721 (975)
.+..++|++.+.||+|+||.||+|.+. +++.||+|.++.... .......+.+|+||
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05068 2 EIDRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT 80 (261)
T ss_pred ccchhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeee
Confidence 355678999999999999999999975 457899999865321 11122566789999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
||+++++|.+++.......++...+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++........
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~-- 158 (261)
T cd05068 81 ELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY-- 158 (261)
T ss_pred ecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc--
Confidence 999999999999875545789999999999999999999999999999999999999999999999999865431100
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTF 880 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~ 880 (975)
.......++..|+|||++.+..++.++|||||||++|+|++ |+.||.+.+....+
T Consensus 159 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~ 214 (261)
T cd05068 159 ------------------------EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVL 214 (261)
T ss_pred ------------------------cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 00011223467999999998889999999999999999998 99999988777766
Q ss_pred HHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 881 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 881 ~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
..+... ...+.....+..+.+++.+||+.+|.+||+ +.+|+
T Consensus 215 ~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~----~~~l~ 255 (261)
T cd05068 215 QQVDQG-YRMPCPPGCPKELYDIMLDCWKEDPDDRPT----FETLQ 255 (261)
T ss_pred HHHHcC-CCCCCCCcCCHHHHHHHHHHhhcCcccCCC----HHHHH
Confidence 666443 344445567889999999999999999999 66664
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.1e-31 Score=321.84 Aligned_cols=243 Identities=25% Similarity=0.346 Sum_probs=181.2
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLI 720 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV 720 (975)
+++|+++++||+|+||.||+|.+..+|+.||||++..... .....+.+..|+|
T Consensus 1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEE
Confidence 4689999999999999999999999999999999864310 1111256788999
Q ss_pred EeccCCCCHHHHHhhCC---------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCC
Q 002051 721 TDYCPGGELFLLLDRQP---------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 791 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~---------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a 791 (975)
||||+|++|.+++.... ...++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLA 160 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAA 160 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcc
Confidence 99999999999986421 123456678889999999999999999999999999999999999999999999
Q ss_pred CccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCC
Q 002051 792 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 871 (975)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf 871 (975)
.............. .................+||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus 161 k~i~~~~~~~~~l~---------~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF 231 (932)
T PRK13184 161 IFKKLEEEDLLDID---------VDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPY 231 (932)
T ss_pred eecccccccccccc---------cccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCC
Confidence 76522111000000 000000011112234568999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHH-hcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh
Q 002051 872 RGKTRQKTFANIL-HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH 919 (975)
Q Consensus 872 ~~~~~~~~~~~i~-~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~ 919 (975)
............. ...........+++.+.+++.+||..||++|+++.
T Consensus 232 ~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~ 280 (932)
T PRK13184 232 RRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSV 280 (932)
T ss_pred CCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHH
Confidence 8755544332211 11111222245788899999999999999999843
|
|
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-31 Score=301.72 Aligned_cols=237 Identities=23% Similarity=0.305 Sum_probs=180.4
Q ss_pred cccccC--CceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEEEEEeccCC
Q 002051 675 KPLGSG--DTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCLITDYCPG 726 (975)
Q Consensus 675 ~~LG~G--~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~lV~Ey~~g 726 (975)
..||.| +||+||+|++..+|+.||+|++..... ........++|+||||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 456766 999999999999999999999864321 1111256678999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcch
Q 002051 727 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 806 (975)
Q Consensus 727 gsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 806 (975)
++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.++++||+.+.........
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~------ 157 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQK------ 157 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcc------
Confidence 99999998765556899999999999999999999999999999999999999999999999865332110000
Q ss_pred hhhhccCCCCCcccccccccccccccCCCCccchhhhcCC--CCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 002051 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANIL 884 (975)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~--~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~ 884 (975)
. ...........++..|+|||++.+. .++.++|||||||++|+|++|..||.+......+....
T Consensus 158 ----------~----~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~ 223 (328)
T cd08226 158 ----------A----KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKL 223 (328)
T ss_pred ----------c----cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHh
Confidence 0 0000001122356779999999764 47889999999999999999999998776555544433
Q ss_pred hcCCC---------------------------------------------CCCCCCCcHHHHHHHHHhcccCccccCCCh
Q 002051 885 HKDLK---------------------------------------------FPSSTPTSLHAKQLMYRLLHRDPKSRLGSH 919 (975)
Q Consensus 885 ~~~~~---------------------------------------------~p~~~~~s~~~~~li~~~L~~dP~~R~t~~ 919 (975)
..... .+.....+..+.+||++||++||++|||
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt-- 301 (328)
T cd08226 224 KGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPS-- 301 (328)
T ss_pred cCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCC--
Confidence 22110 1111234667899999999999999999
Q ss_pred hhHHHHHcCCCccCCC
Q 002051 920 EGANEIKKHPFFKGVN 935 (975)
Q Consensus 920 ~~~~elL~Hp~f~~~~ 935 (975)
++++|+||||+.+.
T Consensus 302 --a~e~l~~~~~~~~~ 315 (328)
T cd08226 302 --ASSLLSHAFFKQVK 315 (328)
T ss_pred --HHHHhhCHHHHHHH
Confidence 99999999998653
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-31 Score=290.82 Aligned_cols=232 Identities=21% Similarity=0.324 Sum_probs=184.3
Q ss_pred cCCCcccccccccCCceEEEEEEEeC-----CCeEEEEEEeccch-------------------------hccccccCCe
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGV-------------------------MLNRNKTKTH 716 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-----t~~~vAiK~l~~~~-------------------------~~~~~~~~~~ 716 (975)
..++|.+.+.||+|+||.||+|.+.. ++..||+|.+.... +.........
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 45679999999999999999999987 78899999875321 0111224566
Q ss_pred EEEEEeccCCCCHHHHHhhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC---cEEEeec
Q 002051 717 VCLITDYCPGGELFLLLDRQPT-----KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDF 788 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~-----~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g---~vkL~DF 788 (975)
.|+||||++|++|.+++..... ..+++..+..++.||+.||.|||+++++||||||+|||++.++ .+||+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~df 163 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADF 163 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccC
Confidence 7999999999999999976421 2589999999999999999999999999999999999998765 5999999
Q ss_pred cCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-C
Q 002051 789 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-G 867 (975)
Q Consensus 789 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G 867 (975)
|+++....... ........++..|+|||++.+..++.++|||||||++|+|++ |
T Consensus 164 g~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g 218 (277)
T cd05036 164 GMARDIYRASY-------------------------YRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLG 218 (277)
T ss_pred ccccccCCccc-------------------------eecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCC
Confidence 99865421100 001112234568999999998889999999999999999996 9
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 868 YTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 868 ~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
..||.+.+.......+... .....+..++..+.+|+.+||+.+|++||| +.++++|
T Consensus 219 ~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps----~~~vl~~ 274 (277)
T cd05036 219 YMPYPGRTNQEVMEFVTGG-GRLDPPKGCPGPVYRIMTDCWQHTPEDRPN----FATILER 274 (277)
T ss_pred CCCCCCCCHHHHHHHHHcC-CcCCCCCCCCHHHHHHHHHHcCCCcccCcC----HHHHHHH
Confidence 9999987777666554433 233334457889999999999999999999 8888876
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-31 Score=296.53 Aligned_cols=233 Identities=27% Similarity=0.462 Sum_probs=179.2
Q ss_pred CcccccccccCCceEEEEEEEeC--CCeEEEEEEeccch---------------------------hccccccC--CeEE
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCG--SGQYFAMKAMDKGV---------------------------MLNRNKTK--THVC 718 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~--t~~~vAiK~l~~~~---------------------------~~~~~~~~--~~~~ 718 (975)
+|.+.++||+|+||.||+|.+.. +++.||+|.+.... +.....+. .++|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 48899999999999999999988 89999999987621 01111133 7899
Q ss_pred EEEeccCCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec----CCcEEEeeccCC
Q 002051 719 LITDYCPGGELFLLLDRQP---TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG----NGHVSLTDFDLS 791 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~---~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~----~g~vkL~DFG~a 791 (975)
+||||++ ++|.+++.... ...+++..++.++.||+.||.|||+++|+||||||+|||++. ++.+||+|||++
T Consensus 81 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 81 LLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 9999995 57887775321 236899999999999999999999999999999999999999 899999999998
Q ss_pred CccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCC
Q 002051 792 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP 870 (975)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~P 870 (975)
........ .........+++.|+|||++.+. .++.++|||||||++|+|++|.+|
T Consensus 160 ~~~~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~ 215 (316)
T cd07842 160 RLFNAPLK------------------------PLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPI 215 (316)
T ss_pred cccCCCcc------------------------cccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCC
Confidence 65432110 00112345688999999988764 578899999999999999999999
Q ss_pred CCCCCHHH---------HHHHHHh--------------------------cCCCCCC---------CCCCcHHHHHHHHH
Q 002051 871 FRGKTRQK---------TFANILH--------------------------KDLKFPS---------STPTSLHAKQLMYR 906 (975)
Q Consensus 871 f~~~~~~~---------~~~~i~~--------------------------~~~~~p~---------~~~~s~~~~~li~~ 906 (975)
|.+..... .+..++. ....++. ....+..+.++|.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 295 (316)
T cd07842 216 FKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRK 295 (316)
T ss_pred CcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHH
Confidence 97654321 1111111 0001110 01456789999999
Q ss_pred hcccCccccCCChhhHHHHHcCCCc
Q 002051 907 LLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 907 ~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
||++||.+||| +.|++.||||
T Consensus 296 ~l~~~P~~Rps----~~eil~~~~f 316 (316)
T cd07842 296 LLEYDPTKRIT----AEEALEHPYF 316 (316)
T ss_pred HhcCCcccCcC----HHHHhcCCCC
Confidence 99999999999 9999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-31 Score=291.66 Aligned_cols=228 Identities=25% Similarity=0.455 Sum_probs=184.8
Q ss_pred cccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------c---c------------ccccCC-----e
Q 002051 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------L---N------------RNKTKT-----H 716 (975)
Q Consensus 671 y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------~---~------------~~~~~~-----~ 716 (975)
|++.+.||.|+||.||+|.+..+++.||+|.+..... . . ...... .
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 7788999999999999999998999999999863210 0 0 000223 3
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
+|++|||+. ++|.+++.......+++..++.++.||+.||.|||+++++|+||+|+||+++.++.+||+|||.+.....
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~ 159 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSF 159 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccC
Confidence 899999995 5899998775445699999999999999999999999999999999999999999999999998865431
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 876 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~ 876 (975)
.. ......++..|+|||++.+..++.++|+|||||++|+|++|.+||.+.+.
T Consensus 160 ~~----------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~ 211 (287)
T cd07838 160 EM----------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE 211 (287)
T ss_pred Cc----------------------------ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh
Confidence 10 11123578899999999998899999999999999999999999998887
Q ss_pred HHHHHHHHhcCC-----CCC-----------C---------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 877 QKTFANILHKDL-----KFP-----------S---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 877 ~~~~~~i~~~~~-----~~p-----------~---------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
.+.+.++..... .++ . ....+..+.+||.+||+.||.+||+ +.+++.||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~----~~~il~~~~~ 287 (287)
T cd07838 212 ADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRIS----AFEALQHPYF 287 (287)
T ss_pred HHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCC----HHHHhcCcCC
Confidence 777766654210 000 0 0124567889999999999999999 9999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-31 Score=300.33 Aligned_cols=232 Identities=29% Similarity=0.460 Sum_probs=184.8
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc--------------------------cccc------cCC
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--------------------------NRNK------TKT 715 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~--------------------------~~~~------~~~ 715 (975)
.++|.+.+.||.|+||.||+|.+..+|+.||+|.+.+.... .... ...
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 35899999999999999999999999999999988643100 0000 123
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
++|+||||+. .+|..++. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 94 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~ 168 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHAD 168 (342)
T ss_pred eEEEEecccc-cCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCC
Confidence 5699999994 57877652 358999999999999999999999999999999999999999999999999985432
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 874 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~ 874 (975)
. ......+++.|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.
T Consensus 169 ~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~ 218 (342)
T cd07879 169 A------------------------------EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 218 (342)
T ss_pred C------------------------------CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 1 1123467889999999876 45788999999999999999999999987
Q ss_pred CHHHHHHHHHhcCC-----------------------CCCC------CCCCcHHHHHHHHHhcccCccccCCChhhHHHH
Q 002051 875 TRQKTFANILHKDL-----------------------KFPS------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 925 (975)
Q Consensus 875 ~~~~~~~~i~~~~~-----------------------~~p~------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~el 925 (975)
+....+..+..... ..+. ....+..+.+||.+||+.||.+||+ +.++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~----~~e~ 294 (342)
T cd07879 219 DYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLT----ATEA 294 (342)
T ss_pred CHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcC----HHHH
Confidence 76655554443100 0000 1235678999999999999999999 9999
Q ss_pred HcCCCccCCCcch
Q 002051 926 KKHPFFKGVNWAL 938 (975)
Q Consensus 926 L~Hp~f~~~~~~~ 938 (975)
+.||||..+....
T Consensus 295 l~h~~f~~~~~~~ 307 (342)
T cd07879 295 LEHPYFDSFRDAD 307 (342)
T ss_pred hcCcchhhccccc
Confidence 9999999886644
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-31 Score=293.99 Aligned_cols=231 Identities=27% Similarity=0.378 Sum_probs=189.0
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEEEe
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLITD 722 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV~E 722 (975)
.|...++||+|+||+||+|++..+++.||+|.+..... .....+....|+|||
T Consensus 22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 101 (313)
T cd06633 22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVME 101 (313)
T ss_pred HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEe
Confidence 37778899999999999999999999999999864210 011125677899999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
|+ .++|.+++... ...+++..+..++.||+.||.|||++||+|+||+|+||+++.++.+||+|||++....
T Consensus 102 ~~-~~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~------- 172 (313)
T cd06633 102 YC-LGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS------- 172 (313)
T ss_pred cC-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccC-------
Confidence 99 46888887653 3468999999999999999999999999999999999999999999999999874311
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhc---CCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
......|+..|+|||++. ...++.++|||||||++|+|++|..||...+....
T Consensus 173 ------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~ 228 (313)
T cd06633 173 ------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA 228 (313)
T ss_pred ------------------------CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 112346889999999984 35678899999999999999999999988777666
Q ss_pred HHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcc
Q 002051 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 937 (975)
Q Consensus 880 ~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~ 937 (975)
...+.....+......++..+.+||.+||+++|.+||+ +.+++.||||+..+-.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~----~~~~l~~~~~~~~~~~ 282 (313)
T cd06633 229 LYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPA----SAELLRHDFVRRDRPA 282 (313)
T ss_pred HHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcC----HHHHhcCcccCCCchh
Confidence 66665544433333456778999999999999999999 9999999999876543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-31 Score=292.54 Aligned_cols=232 Identities=21% Similarity=0.345 Sum_probs=185.9
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCC-----CeEEEEEEeccchh-------------------------ccccccCC
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVM-------------------------LNRNKTKT 715 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t-----~~~vAiK~l~~~~~-------------------------~~~~~~~~ 715 (975)
+...+|++.++||.|+||.||+|.+..+ ++.||||+++.... ........
T Consensus 2 i~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~ 81 (283)
T cd05091 2 INLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ 81 (283)
T ss_pred CCHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC
Confidence 4556799999999999999999998653 57899999874310 01111456
Q ss_pred eEEEEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC
Q 002051 716 HVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 781 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g 781 (975)
.+++++||+.+++|.+++.... ...++...+..++.|++.||.|||++||+||||||+|||++.++
T Consensus 82 ~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 82 PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKL 161 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCC
Confidence 7889999999999999985321 23478888999999999999999999999999999999999999
Q ss_pred cEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHH
Q 002051 782 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 861 (975)
Q Consensus 782 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il 861 (975)
.+||+|||+++....... ........+++.|+|||.+.+..++.++|||||||++
T Consensus 162 ~~kl~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l 216 (283)
T cd05091 162 NVKISDLGLFREVYAADY-------------------------YKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVL 216 (283)
T ss_pred ceEecccccccccccchh-------------------------eeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHH
Confidence 999999999865421100 0111233567899999999888899999999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 862 YEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 862 ~ell~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
|+|++ |..||.+....+.+..+...... +....++..+.+|+.+||+.+|.+||+ +++|+.
T Consensus 217 ~el~~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~RP~----~~~i~~ 278 (283)
T cd05091 217 WEVFSYGLQPYCGYSNQDVIEMIRNRQVL-PCPDDCPAWVYTLMLECWNEFPSRRPR----FKDIHS 278 (283)
T ss_pred HHHHcCCCCCCCCCCHHHHHHHHHcCCcC-CCCCCCCHHHHHHHHHHhCCCcccCCC----HHHHHH
Confidence 99997 89999988887777777665432 333457889999999999999999999 888765
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-31 Score=294.07 Aligned_cols=237 Identities=27% Similarity=0.402 Sum_probs=189.2
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeE
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHV 717 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~ 717 (975)
..+..++|.+.+.||.|+||.||+|.+..+++.||||.+++... .........+
T Consensus 10 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~ 89 (296)
T cd06618 10 YPADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDV 89 (296)
T ss_pred ccCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeE
Confidence 45677899999999999999999999999999999999865321 1111256678
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~-~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
|+||||+ +++|.+++... ...+++..+..++.||+.||.|||+ +||+||||+|+||+++.++.+||+|||++..+..
T Consensus 90 ~~v~e~~-~~~l~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~ 167 (296)
T cd06618 90 FICMELM-STCLDKLLKRI-QGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVD 167 (296)
T ss_pred EEEeecc-CcCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccC
Confidence 9999999 56888877663 2478999999999999999999997 5999999999999999999999999998854321
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC----CCChhHHHHHHHHHHHHHhCCCCCC
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGILLYEMLYGYTPFR 872 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~----~~~k~DIWSLG~il~ell~G~~Pf~ 872 (975)
.. ......+++.|+|||.+.+.. ++.++|||||||++|+|++|+.||.
T Consensus 168 ~~----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 219 (296)
T cd06618 168 SK----------------------------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYK 219 (296)
T ss_pred CC----------------------------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCC
Confidence 10 011235788999999987654 7889999999999999999999997
Q ss_pred CCCH-HHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 873 GKTR-QKTFANILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 873 ~~~~-~~~~~~i~~~~~-~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
.... .+.+..+..... ..+....++..+.+||.+||..||.+||+ +++++.||||...
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~ 279 (296)
T cd06618 220 NCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPK----YRELLQHPFIRRY 279 (296)
T ss_pred cchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCC----HHHHhcChhhhcc
Confidence 6433 344445544332 23333346889999999999999999999 9999999999853
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-31 Score=295.80 Aligned_cols=230 Identities=28% Similarity=0.384 Sum_probs=186.7
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLI 720 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV 720 (975)
...|.+.+.||+|+||.||+|.+..+++.||+|.+..... ..........|+|
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 3569999999999999999999999999999998753210 0111245678999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 800 (975)
|||+. |+|.+++... ...+++..+..++.||+.||.|||++||+|+||+|+||+++.++.++|+|||++.....
T Consensus 94 ~e~~~-g~l~~~~~~~-~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~---- 167 (307)
T cd06607 94 MEYCL-GSASDILEVH-KKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSP---- 167 (307)
T ss_pred HHhhC-CCHHHHHHHc-ccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCC----
Confidence 99995 6887777643 24689999999999999999999999999999999999999999999999998854321
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhc---CCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
.....|++.|+|||++. ...++.++||||||+++|+|++|..||.+.+..
T Consensus 168 ---------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~ 220 (307)
T cd06607 168 ---------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM 220 (307)
T ss_pred ---------------------------CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH
Confidence 12346788999999874 355788999999999999999999999887776
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
.....+............++..+.++|.+||..+|++||+ +.+|+.||||...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~ 273 (307)
T cd06607 221 SALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPS----SEELLKHRFVLRE 273 (307)
T ss_pred HHHHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcC----HHHHhcChhhccc
Confidence 6655554433222222346788999999999999999999 9999999999753
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-31 Score=291.34 Aligned_cols=230 Identities=28% Similarity=0.395 Sum_probs=189.6
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-------------------------ccccccCCeEEEEEecc
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-------------------------LNRNKTKTHVCLITDYC 724 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-------------------------~~~~~~~~~~~lV~Ey~ 724 (975)
-|++++.||.|+||.||+|.+..+++.||||++..... ........++|+||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 48889999999999999999999999999998764321 11112567789999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCc
Q 002051 725 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 804 (975)
Q Consensus 725 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~ 804 (975)
++++|..++.. ..++...+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 85 ~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~------ 155 (277)
T cd06641 85 GGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ------ 155 (277)
T ss_pred CCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccch------
Confidence 99999999864 458999999999999999999999999999999999999999999999999885432110
Q ss_pred chhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 002051 805 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANIL 884 (975)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~ 884 (975)
.......|+..|+|||.+.+..++.++|+|||||++|+|++|..||...+.......+.
T Consensus 156 ---------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~ 214 (277)
T cd06641 156 ---------------------IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIP 214 (277)
T ss_pred ---------------------hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHh
Confidence 01123467889999999988888999999999999999999999998777665555544
Q ss_pred hcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 885 HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 885 ~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
..... .....++..+.++|.+||+.+|.+||+ +.+++.||||...
T Consensus 215 ~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~~l~~~~~~~~ 259 (277)
T cd06641 215 KNNPP-TLEGNYSKPLKEFVEACLNKEPSFRPT----AKELLKHKFIVRF 259 (277)
T ss_pred cCCCC-CCCcccCHHHHHHHHHHccCChhhCcC----HHHHHhCHHHhhh
Confidence 33221 122346789999999999999999999 9999999999764
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.6e-31 Score=286.93 Aligned_cols=232 Identities=26% Similarity=0.411 Sum_probs=179.6
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEEec
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITDY 723 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~Ey 723 (975)
.+.+.....||+|+||.||+|.+..++..||+|.+.... +........++|+||||
T Consensus 7 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 86 (268)
T cd06624 7 YDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQ 86 (268)
T ss_pred cccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEec
Confidence 444555568999999999999999999999999876431 11112256789999999
Q ss_pred cCCCCHHHHHhhCCCCCC--CHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-CCcEEEeeccCCCccCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVL--KEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l--~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~-~g~vkL~DFG~a~~~~~~~~~ 800 (975)
+++++|.+++.... ..+ ++..+..++.||+.||.|||++||+||||||+||+++. ++.++|+|||.+.......
T Consensus 87 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~-- 163 (268)
T cd06624 87 VPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN-- 163 (268)
T ss_pred CCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCC--
Confidence 99999999997642 334 88889999999999999999999999999999999976 6799999999885432110
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC--CCChhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--HTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~--~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~ 878 (975)
.......|++.|+|||++.+.. ++.++|+||||+++|+|++|..||.......
T Consensus 164 -------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~ 218 (268)
T cd06624 164 -------------------------PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQ 218 (268)
T ss_pred -------------------------CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChh
Confidence 0112235789999999986643 7889999999999999999999997643322
Q ss_pred -HHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 879 -TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 879 -~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
..............+..++.++.+|+.+||+.+|.+||| +.+++.||||
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~ll~~~~~ 268 (268)
T cd06624 219 AAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRAS----AHDLLQDPFL 268 (268)
T ss_pred hhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCC----HHHHHhCCCC
Confidence 111111111111223346789999999999999999999 9999999997
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-31 Score=291.37 Aligned_cols=233 Identities=22% Similarity=0.359 Sum_probs=184.9
Q ss_pred ccCCCcccccccccCCceEEEEEEEe----CCCeEEEEEEeccch-------------------------hccccccCCe
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELC----GSGQYFAMKAMDKGV-------------------------MLNRNKTKTH 716 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~----~t~~~vAiK~l~~~~-------------------------~~~~~~~~~~ 716 (975)
+..++|++.+.||+|+||.||+|... .+++.||+|.+.... +.........
T Consensus 2 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 81 (283)
T cd05090 2 LPLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQP 81 (283)
T ss_pred CChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCc
Confidence 45678999999999999999999864 356789999986421 0111125567
Q ss_pred EEEEEeccCCCCHHHHHhhCC---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC
Q 002051 717 VCLITDYCPGGELFLLLDRQP---------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 781 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~---------------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g 781 (975)
.|+||||+++++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||++.++
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQL 161 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCC
Confidence 899999999999999985321 13478889999999999999999999999999999999999999
Q ss_pred cEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHH
Q 002051 782 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 861 (975)
Q Consensus 782 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il 861 (975)
.+||+|||+++....... ........++..|+|||.+.+..++.++|+|||||++
T Consensus 162 ~~kl~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 216 (283)
T cd05090 162 HVKISDLGLSREIYSADY-------------------------YRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVL 216 (283)
T ss_pred cEEeccccccccccCCcc-------------------------eecccCCCccceecChHHhccCCCCchhhhHHHHHHH
Confidence 999999999865431110 0111233457789999999988899999999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 862 YEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 862 ~ell~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
|+|++ |..||.+.+.......+.... .++....++..+.+++.+||+.||.+||+ +.+|+++
T Consensus 217 ~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~~i~~~ 279 (283)
T cd05090 217 WEIFSFGLQPYYGFSNQEVIEMVRKRQ-LLPCSEDCPPRMYSLMTECWQEGPSRRPR----FKDIHTR 279 (283)
T ss_pred HHHHcCCCCCCCCCCHHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHcccCcccCcC----HHHHHHH
Confidence 99998 999998877666655554433 33444567889999999999999999999 7777654
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-32 Score=321.05 Aligned_cols=241 Identities=24% Similarity=0.345 Sum_probs=173.9
Q ss_pred CCCcccccccccCCceEEEEEEEeCCC-eEEEEE------------------Eeccc-----------------------
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSG-QYFAMK------------------AMDKG----------------------- 705 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~-~~vAiK------------------~l~~~----------------------- 705 (975)
.++|+++++||+|+||+||+|..+... ..++.| .+...
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 568999999999999999999865332 111111 11100
Q ss_pred hhccccccCCeEEEEEeccCCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc
Q 002051 706 VMLNRNKTKTHVCLITDYCPGGELFLLLDRQP---TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 782 (975)
Q Consensus 706 ~~~~~~~~~~~~~lV~Ey~~ggsL~~~l~~~~---~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~ 782 (975)
.+........+.|+|++++ +++|..++.... ........++.++.||+.||.|||++|||||||||+|||++.++.
T Consensus 227 ~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~ 305 (501)
T PHA03210 227 KIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGK 305 (501)
T ss_pred cEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC
Confidence 0111222567789999999 668888775421 122346678889999999999999999999999999999999999
Q ss_pred EEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHH
Q 002051 783 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 862 (975)
Q Consensus 783 vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ 862 (975)
+||+|||+++.+.... .......+||+.|+|||++.+..++.++|||||||++|
T Consensus 306 vkL~DFGla~~~~~~~--------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 359 (501)
T PHA03210 306 IVLGDFGTAMPFEKER--------------------------EAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILL 359 (501)
T ss_pred EEEEeCCCceecCccc--------------------------ccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHH
Confidence 9999999996543110 01122467999999999999999999999999999999
Q ss_pred HHHhCCCC-CCCC--CHHHHHHHHHhcC----CCCC--------------------------CCCCCcHHHHHHHHHhcc
Q 002051 863 EMLYGYTP-FRGK--TRQKTFANILHKD----LKFP--------------------------SSTPTSLHAKQLMYRLLH 909 (975)
Q Consensus 863 ell~G~~P-f~~~--~~~~~~~~i~~~~----~~~p--------------------------~~~~~s~~~~~li~~~L~ 909 (975)
+|++|..+ |... .....+..++... ..+| ....++.++.++|.+||+
T Consensus 360 ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~ 439 (501)
T PHA03210 360 DMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLT 439 (501)
T ss_pred HHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhc
Confidence 99998754 4322 2222232222210 0011 012345678889999999
Q ss_pred cCccccCCChhhHHHHHcCCCccCCCcchh
Q 002051 910 RDPKSRLGSHEGANEIKKHPFFKGVNWALV 939 (975)
Q Consensus 910 ~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~ 939 (975)
+||.+||| +.|+|.||||........
T Consensus 440 ~DP~~Rps----a~elL~hp~f~~~~~~~~ 465 (501)
T PHA03210 440 FDWHLRPG----AAELLALPLFSAEEEEEI 465 (501)
T ss_pred cCcccCcC----HHHHhhChhhhcCCchHH
Confidence 99999999 999999999998766543
|
|
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-31 Score=293.81 Aligned_cols=237 Identities=22% Similarity=0.338 Sum_probs=188.1
Q ss_pred ccccccCCCcccccccccCCceEEEEEEEeCCC-----eEEEEEEeccchh--------------------------ccc
Q 002051 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSG-----QYFAMKAMDKGVM--------------------------LNR 710 (975)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~-----~~vAiK~l~~~~~--------------------------~~~ 710 (975)
+...+..++|++.+.||+|+||.||++.+...+ ..+|+|.+..... ...
T Consensus 5 ~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~ 84 (293)
T cd05053 5 PEWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGV 84 (293)
T ss_pred cccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence 455677889999999999999999999987543 7899998764310 011
Q ss_pred cccCCeEEEEEeccCCCCHHHHHhhC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 002051 711 NKTKTHVCLITDYCPGGELFLLLDRQ--------------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 776 (975)
Q Consensus 711 ~~~~~~~~lV~Ey~~ggsL~~~l~~~--------------~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NIL 776 (975)
......+|+||||+++|+|..++... ....+++..+..++.||+.||.|||++||+||||||+|||
T Consensus 85 ~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil 164 (293)
T cd05053 85 CTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVL 164 (293)
T ss_pred EcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEE
Confidence 12456789999999999999999642 2346899999999999999999999999999999999999
Q ss_pred EecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHH
Q 002051 777 LQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWA 856 (975)
Q Consensus 777 l~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWS 856 (975)
++.++.+||+|||+++....... ........++..|+|||++.+..++.++||||
T Consensus 165 ~~~~~~~kL~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s 219 (293)
T cd05053 165 VTEDHVMKIADFGLARDIHHIDY-------------------------YRKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 219 (293)
T ss_pred EcCCCeEEeCccccccccccccc-------------------------eeccCCCCCCccccCHHHhccCCcCcccceee
Confidence 99999999999999865431100 00111123467899999999888999999999
Q ss_pred HHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 857 LGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 857 LG~il~ell~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
|||++|+|++ |..||.+....+....+... .....+...+..+.+|+.+||..||++||| +.+++++
T Consensus 220 lG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~eil~~ 287 (293)
T cd05053 220 FGVLLWEIFTLGGSPYPGIPVEELFKLLKEG-YRMEKPQNCTQELYHLMRDCWHEVPSQRPT----FKQLVED 287 (293)
T ss_pred hhhHHHHHhcCCCCCCCCCCHHHHHHHHHcC-CcCCCCCCCCHHHHHHHHHHcccCcccCcC----HHHHHHH
Confidence 9999999997 99999887776666555443 333444457889999999999999999999 7777653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-31 Score=301.19 Aligned_cols=229 Identities=28% Similarity=0.433 Sum_probs=183.6
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------ccc------------------cccCC
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------LNR------------------NKTKT 715 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------~~~------------------~~~~~ 715 (975)
.++|.+++.||+|+||.||+|.+..+++.||+|++.+... +.. .....
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 95 (345)
T ss_pred cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccc
Confidence 4789999999999999999999999999999998864310 000 00124
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
.+|++++++ |++|.+++.. ..+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++....
T Consensus 96 ~~~lv~~~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~ 171 (345)
T cd07877 96 DVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 171 (345)
T ss_pred cEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccccccccc
Confidence 578999988 8899988864 358999999999999999999999999999999999999999999999999985422
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 874 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~ 874 (975)
. ......|++.|+|||.+.+ ..++.++|||||||++|+|++|++||...
T Consensus 172 ~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 221 (345)
T cd07877 172 D------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 221 (345)
T ss_pred c------------------------------cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 1 1123467889999999876 56788999999999999999999999876
Q ss_pred CHHHHHHHHHhcCC-----------------------CCCC------CCCCcHHHHHHHHHhcccCccccCCChhhHHHH
Q 002051 875 TRQKTFANILHKDL-----------------------KFPS------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 925 (975)
Q Consensus 875 ~~~~~~~~i~~~~~-----------------------~~p~------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~el 925 (975)
+....+..+..... ..+. ....++.+.+||.+||++||.+|++ +.++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t----~~e~ 297 (345)
T cd07877 222 DHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT----AAQA 297 (345)
T ss_pred CHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCC----HHHH
Confidence 66555444332110 0000 1135778999999999999999999 9999
Q ss_pred HcCCCccCC
Q 002051 926 KKHPFFKGV 934 (975)
Q Consensus 926 L~Hp~f~~~ 934 (975)
+.||||...
T Consensus 298 l~h~~f~~~ 306 (345)
T cd07877 298 LAHAYFAQY 306 (345)
T ss_pred hcChhhhhc
Confidence 999999864
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.6e-31 Score=293.09 Aligned_cols=242 Identities=26% Similarity=0.397 Sum_probs=185.4
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhcc--------------------------cc--------cc
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN--------------------------RN--------KT 713 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~--------------------------~~--------~~ 713 (975)
.++|++.++||.|+||.||+|.++.+++.||+|.+....... .. ..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 578999999999999999999999999999999875321100 00 12
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 714 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 714 ~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
...+|+||||+ +++|...+... ...+++..++.++.||++||.|||++||+|+||||+|||++.++.++|+|||++..
T Consensus 87 ~~~~~lv~~~~-~~~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 164 (311)
T cd07866 87 RGSVYMVTPYM-DHDLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARP 164 (311)
T ss_pred CceEEEEEecC-CcCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchh
Confidence 34579999999 45787777643 34699999999999999999999999999999999999999999999999999865
Q ss_pred cCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCC
Q 002051 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFR 872 (975)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~ 872 (975)
.......... .............|++.|+|||.+.+. .++.++|||||||++|+|++|++||.
T Consensus 165 ~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~ 228 (311)
T cd07866 165 YDGPPPNPKG----------------GGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQ 228 (311)
T ss_pred ccCCCccccc----------------CCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCC
Confidence 4322110000 000011122345678999999988654 57889999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCCC-----------------------CCC-----CCCCcHHHHHHHHHhcccCccccCCChhhHHH
Q 002051 873 GKTRQKTFANILHKDLK-----------------------FPS-----STPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 924 (975)
Q Consensus 873 ~~~~~~~~~~i~~~~~~-----------------------~p~-----~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~e 924 (975)
+.+.......+...... .+. ....+..+.+||.+||+.||.+||| +.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t----~~e 304 (311)
T cd07866 229 GKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLT----ASD 304 (311)
T ss_pred CCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcC----HHH
Confidence 88776666555431100 000 0123467889999999999999999 999
Q ss_pred HHcCCCc
Q 002051 925 IKKHPFF 931 (975)
Q Consensus 925 lL~Hp~f 931 (975)
++.||||
T Consensus 305 ll~~~~f 311 (311)
T cd07866 305 ALEHPYF 311 (311)
T ss_pred HhcCCCC
Confidence 9999998
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.3e-31 Score=282.14 Aligned_cols=223 Identities=49% Similarity=0.867 Sum_probs=187.4
Q ss_pred cccCCceEEEEEEEeCCCeEEEEEEeccchhc---------------------------cccccCCeEEEEEeccCCCCH
Q 002051 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVML---------------------------NRNKTKTHVCLITDYCPGGEL 729 (975)
Q Consensus 677 LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~---------------------------~~~~~~~~~~lV~Ey~~ggsL 729 (975)
||.|+||.||++.+..+++.||+|++.+.... ........+|+||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 79999999999999989999999998754321 122367889999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhh
Q 002051 730 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 809 (975)
Q Consensus 730 ~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 809 (975)
.+++... ..+++..+..++.||+.||.|||+++++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~----------- 147 (250)
T cd05123 81 FSHLSKE--GRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG----------- 147 (250)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC-----------
Confidence 9999874 468999999999999999999999999999999999999999999999999885533110
Q ss_pred hccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC
Q 002051 810 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 889 (975)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~ 889 (975)
.......++..|++||.+.+..++.++|+||||+++|++++|..||...+.......+......
T Consensus 148 ----------------~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 211 (250)
T cd05123 148 ----------------SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLR 211 (250)
T ss_pred ----------------CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCC
Confidence 1123456788999999999888899999999999999999999999888776667777664444
Q ss_pred CCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 890 FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 890 ~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
++ ...+..+.+||++||..||++||++.. +.+++.||||
T Consensus 212 ~~--~~~~~~l~~~i~~~l~~~p~~R~~~~~-~~~l~~~~~f 250 (250)
T cd05123 212 FP--EFLSPEARDLISGLLQKDPTKRLGSGG-AEEIKAHPFF 250 (250)
T ss_pred CC--CCCCHHHHHHHHHHhcCCHhhCCCccc-HHHHHhCCCC
Confidence 43 345889999999999999999999322 3999999998
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-31 Score=292.22 Aligned_cols=230 Identities=31% Similarity=0.495 Sum_probs=188.0
Q ss_pred cccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEEeccCC
Q 002051 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITDYCPG 726 (975)
Q Consensus 671 y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~Ey~~g 726 (975)
|....+||+|+||.||++....+++.||||.+.... +........+.|+||||+++
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 101 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 101 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCC
Confidence 445578999999999999999999999999875321 01122256789999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcch
Q 002051 727 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 806 (975)
Q Consensus 727 gsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 806 (975)
++|.+++.. ..+++..++.++.|++.||+|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 102 ~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~--------- 169 (292)
T cd06657 102 GALTDIVTH---TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--------- 169 (292)
T ss_pred CcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccc---------
Confidence 999998754 45899999999999999999999999999999999999999999999999987543211
Q ss_pred hhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 002051 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 886 (975)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~ 886 (975)
........|++.|+|||.+.+..++.++|+||+|+++|+|++|..||.+.........+...
T Consensus 170 ------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~ 231 (292)
T cd06657 170 ------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 231 (292)
T ss_pred ------------------cccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhh
Confidence 01112346889999999998888899999999999999999999999887766655544332
Q ss_pred C-CCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 887 D-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 887 ~-~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
. ..++....++..+.++|.+||+.+|.+||+ +.+++.||||...
T Consensus 232 ~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~----~~~ll~~~~~~~~ 276 (292)
T cd06657 232 LPPKLKNLHKVSPSLKGFLDRLLVRDPAQRAT----AAELLKHPFLAKA 276 (292)
T ss_pred CCcccCCcccCCHHHHHHHHHHHhCCcccCcC----HHHHhcChHHhcc
Confidence 2 122233456889999999999999999999 9999999999754
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-31 Score=288.02 Aligned_cols=228 Identities=26% Similarity=0.367 Sum_probs=181.5
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV~ 721 (975)
++|++.+.||+|+||.||+|++..+++.||||.+..... .......++.|+||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 579999999999999999999999999999997653211 11112467889999
Q ss_pred eccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 722 DYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
||+++++|.+++... ....+++..+..++.||+.||.|||++|++|+||||+|||++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~- 160 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT- 160 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchh-
Confidence 999999999988642 23458999999999999999999999999999999999999999999999999886543110
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCH--H
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR--Q 877 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~--~ 877 (975)
.......|++.|+|||.+.+..++.++|+||||+++|+|++|..||..... .
T Consensus 161 --------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~ 214 (267)
T cd08228 161 --------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLF 214 (267)
T ss_pred --------------------------HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHH
Confidence 011234688899999999988899999999999999999999999965432 3
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
.....+.....+.......+..+.++|.+||..+|++||+ +.++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~~vl~ 260 (267)
T cd08228 215 SLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPD----IGYVHQ 260 (267)
T ss_pred HHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcC----HHHHHH
Confidence 3333333322221112346788999999999999999999 888875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-32 Score=304.71 Aligned_cols=226 Identities=23% Similarity=0.350 Sum_probs=183.4
Q ss_pred ccccccccCCceEEEEEEEeCCCeEEEEEEec-------------------------cchhc---cccc--cCCeEEEEE
Q 002051 672 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMD-------------------------KGVML---NRNK--TKTHVCLIT 721 (975)
Q Consensus 672 ~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~-------------------------~~~~~---~~~~--~~~~~~lV~ 721 (975)
+.-..||+|+|-+||+|.|..+|..||--.++ ...++ .... .+..+.+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 45568999999999999999999888732221 11111 1111 456789999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEEe-cCCcEEEeeccCCCccCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQ-GNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~g--IiHrDIKp~NILl~-~~g~vkL~DFG~a~~~~~~~ 798 (975)
|+|..|+|..|++++ +.++...++.|++||++||.|||++. |||||||++||+|+ ..|.|||+|+|+|.....
T Consensus 123 EL~TSGtLr~Y~kk~--~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~-- 198 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKH--RRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK-- 198 (632)
T ss_pred ecccCCcHHHHHHHh--ccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhc--
Confidence 999999999999986 56899999999999999999999995 99999999999998 468999999999965431
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC-HH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT-RQ 877 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~-~~ 877 (975)
......+|||.|||||.+- ..|+..+||||||++++||+|+..||.... ..
T Consensus 199 ---------------------------s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~A 250 (632)
T KOG0584|consen 199 ---------------------------SHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPA 250 (632)
T ss_pred ---------------------------cccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHH
Confidence 1233478999999999997 569999999999999999999999998754 45
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
.++.++..+..+--...--.+++++||.+||.. ...|+| +.|||.||||..-
T Consensus 251 QIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~s----a~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 251 QIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLS----AKELLKDPFFDED 302 (632)
T ss_pred HHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccC----HHHHhhChhhccc
Confidence 556666665433222233578999999999998 899999 9999999999874
|
|
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.3e-31 Score=285.90 Aligned_cols=229 Identities=22% Similarity=0.333 Sum_probs=184.1
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------ccccccCCeEEEEEec
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------LNRNKTKTHVCLITDY 723 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------~~~~~~~~~~~lV~Ey 723 (975)
+.++|++++.||+|+||.||++.... +..+|+|.+..... .........+|+||||
T Consensus 2 ~~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05113 2 DPKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEY 80 (256)
T ss_pred ChHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEc
Confidence 35679999999999999999998754 45699998775321 1111245567999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
+.+++|.+++.... ..+++..++.++.||+.||.|||++|++|+||||+|||++.++.+||+|||.+.......
T Consensus 81 ~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~----- 154 (256)
T cd05113 81 MSNGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE----- 154 (256)
T ss_pred CCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCc-----
Confidence 99999999997643 368999999999999999999999999999999999999999999999999885432110
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFAN 882 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~~ 882 (975)
........++..|+|||.+.+..++.++|||||||++|+|++ |..||...+.......
T Consensus 155 ---------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~ 213 (256)
T cd05113 155 ---------------------YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEK 213 (256)
T ss_pred ---------------------eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHH
Confidence 001112235678999999998889999999999999999998 9999988777777777
Q ss_pred HHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 883 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 883 i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
+...... +.....+..+.+++.+||+.||.+||+ +.+|+.+
T Consensus 214 ~~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~~ll~~ 254 (256)
T cd05113 214 VSQGLRL-YRPHLASEKVYAIMYSCWHEKAEERPT----FQQLLSS 254 (256)
T ss_pred HhcCCCC-CCCCCCCHHHHHHHHHHcCCCcccCCC----HHHHHHh
Confidence 7654332 233446789999999999999999999 8888754
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.2e-31 Score=284.77 Aligned_cols=230 Identities=23% Similarity=0.363 Sum_probs=188.1
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------ccccccCCeEEEEE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------~~~~~~~~~~~lV~ 721 (975)
.+..++|.+.+.||.|+||.||+|.+. .++.+|||.+..... .........+|+||
T Consensus 2 ~~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (261)
T cd05034 2 EIPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT 80 (261)
T ss_pred ccchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEE
Confidence 466789999999999999999999975 457899998875321 11112457789999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
||+++++|.+++.......++...+..++.||+.||.|||++|++|+||||+||+++.++.+||+|||.+.......
T Consensus 81 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~--- 157 (261)
T cd05034 81 EYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDE--- 157 (261)
T ss_pred eccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchh---
Confidence 99999999999987655679999999999999999999999999999999999999999999999999986543110
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTF 880 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~ 880 (975)
........++..|+|||.+.+..++.++|+|||||++|+|++ |+.||.+.+....+
T Consensus 158 -----------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~ 214 (261)
T cd05034 158 -----------------------YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVL 214 (261)
T ss_pred -----------------------hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 000112234568999999998889999999999999999998 99999888877777
Q ss_pred HHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 881 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 881 ~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
..+... +..+.+...+..+.+++.+||+.+|.+||+ +++++
T Consensus 215 ~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~l~ 255 (261)
T cd05034 215 EQVERG-YRMPRPPNCPEELYDLMLQCWDKDPEERPT----FEYLQ 255 (261)
T ss_pred HHHHcC-CCCCCCCCCCHHHHHHHHHHcccCcccCCC----HHHHH
Confidence 766543 344444556889999999999999999999 77765
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-31 Score=290.78 Aligned_cols=239 Identities=28% Similarity=0.457 Sum_probs=196.9
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------ccccccCCeEEEEEec
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------LNRNKTKTHVCLITDY 723 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------~~~~~~~~~~~lV~Ey 723 (975)
..+.|++...||.|+||.||++.+..+++.||+|++..... ..........|+|+||
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 96 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEY 96 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEec
Confidence 35579999999999999999999998999999999875321 1111255788999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
++|++|.+++.... ..++...+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++.......
T Consensus 97 ~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~----- 170 (286)
T cd06614 97 MDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK----- 170 (286)
T ss_pred cCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccch-----
Confidence 99999999998753 379999999999999999999999999999999999999999999999999875432110
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i 883 (975)
.......+++.|++||.+.+..++.++|+|||||++|+|++|..||...+.......+
T Consensus 171 ----------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~ 228 (286)
T cd06614 171 ----------------------SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLI 228 (286)
T ss_pred ----------------------hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 1112345788999999999888999999999999999999999999887776655555
Q ss_pred HhcCCC-CCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcc
Q 002051 884 LHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 937 (975)
Q Consensus 884 ~~~~~~-~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~ 937 (975)
...... .+....++..+.+||.+||+.+|.+||| +.+++.|+||+...|.
T Consensus 229 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~il~~~~~~~~~~~ 279 (286)
T cd06614 229 TTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPS----AEELLQHPFLKKACPK 279 (286)
T ss_pred HhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcC----HHHHhhChHhhccCch
Confidence 543332 2223337889999999999999999999 9999999999985443
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-31 Score=286.82 Aligned_cols=231 Identities=22% Similarity=0.271 Sum_probs=185.7
Q ss_pred cCCCcccccccccCCceEEEEEEEeCC---CeEEEEEEeccchh-------------------------ccccccCCeEE
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVM-------------------------LNRNKTKTHVC 718 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t---~~~vAiK~l~~~~~-------------------------~~~~~~~~~~~ 718 (975)
..++|++.+.||+|+||.||+|.+..+ ...||+|.++.... .........+|
T Consensus 2 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (266)
T cd05033 2 DPSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVM 81 (266)
T ss_pred ChHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceE
Confidence 346799999999999999999998654 46899998764310 11112566789
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
+||||+++++|.+++.... +.++...+..++.|++.||.|||++||+|+||||+|||++.++.++|+|||++.......
T Consensus 82 iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (266)
T cd05033 82 IITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSE 160 (266)
T ss_pred EEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccc
Confidence 9999999999999997643 468999999999999999999999999999999999999999999999999987653110
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 877 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~ 877 (975)
.. .......+++.|+|||.+.+..++.++|||||||++|+|++ |..||......
T Consensus 161 ~~-------------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~ 215 (266)
T cd05033 161 AT-------------------------YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ 215 (266)
T ss_pred cc-------------------------eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH
Confidence 00 00112235678999999998889999999999999999997 99999887776
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
.....+... ...+.....+..+.+|+.+||+.+|++||+ +.+++++
T Consensus 216 ~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~----~~ei~~~ 261 (266)
T cd05033 216 DVIKAVEDG-YRLPPPMDCPSALYQLMLDCWQKDRNERPT----FSQIVST 261 (266)
T ss_pred HHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCCcccCcC----HHHHHHH
Confidence 666666543 344445567899999999999999999999 7777653
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.5e-31 Score=288.22 Aligned_cols=228 Identities=30% Similarity=0.483 Sum_probs=184.2
Q ss_pred cccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEEEEEecc
Q 002051 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCLITDYC 724 (975)
Q Consensus 671 y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~lV~Ey~ 724 (975)
|.+.+.||.|+||+||+|....+++.||||.+..... ........+.|+||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 6788999999999999999999999999998765311 01112567899999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCc
Q 002051 725 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 804 (975)
Q Consensus 725 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~ 804 (975)
+++|.+++.......+++..+..++.|++.+|.|||++|++|+||+|+||+++.++.++|+|||.+......
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~------- 152 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR------- 152 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCC-------
Confidence 889999998764457899999999999999999999999999999999999999999999999988543211
Q ss_pred chhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002051 805 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883 (975)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i 883 (975)
.......++..|+|||++.+ ..++.++|+||||+++|+|++|++||...+..+.+..+
T Consensus 153 ---------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~ 211 (283)
T cd07830 153 ---------------------PPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKI 211 (283)
T ss_pred ---------------------CCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHH
Confidence 01123467889999998854 45788999999999999999999999887766655544
Q ss_pred HhcCC-------------------CCCC---------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 884 LHKDL-------------------KFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 884 ~~~~~-------------------~~p~---------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
..... .++. ....+..+.+||.+||+.||++||| ++|++.||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt----~~ei~~~~~~ 283 (283)
T cd07830 212 CSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPT----ASQALQHPYF 283 (283)
T ss_pred HHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCC----HHHHhhCCCC
Confidence 32100 0000 0123578999999999999999999 9999999998
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.3e-31 Score=284.40 Aligned_cols=221 Identities=21% Similarity=0.277 Sum_probs=175.1
Q ss_pred cccccCCceEEEEEEE--eCCCeEEEEEEeccchh--------------cccc-----------ccCCeEEEEEeccCCC
Q 002051 675 KPLGSGDTGSVHLVEL--CGSGQYFAMKAMDKGVM--------------LNRN-----------KTKTHVCLITDYCPGG 727 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~--~~t~~~vAiK~l~~~~~--------------~~~~-----------~~~~~~~lV~Ey~~gg 727 (975)
++||+|+||.||+|.+ ..+++.+|+|+++.... +... ......++||||++++
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~ 80 (257)
T cd05116 1 GELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELG 80 (257)
T ss_pred CcCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCC
Confidence 3699999999999965 46788999999864310 0000 1345678999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchh
Q 002051 728 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 807 (975)
Q Consensus 728 sL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 807 (975)
+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.........
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~------- 151 (257)
T cd05116 81 PLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY------- 151 (257)
T ss_pred cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCe-------
Confidence 999999764 46899999999999999999999999999999999999999999999999998654321100
Q ss_pred hhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhc
Q 002051 808 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHK 886 (975)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~~i~~~ 886 (975)
........++..|+|||.+....++.++|||||||++|+|++ |..||...+.......+..+
T Consensus 152 -----------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~ 214 (257)
T cd05116 152 -----------------YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESG 214 (257)
T ss_pred -----------------eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCC
Confidence 001112234678999999988889999999999999999997 99999887777766666544
Q ss_pred CCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhH
Q 002051 887 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGA 922 (975)
Q Consensus 887 ~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~ 922 (975)
. ..+.+..++.++.+||.+||+.||++||++..+.
T Consensus 215 ~-~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~ 249 (257)
T cd05116 215 E-RMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVE 249 (257)
T ss_pred C-CCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHH
Confidence 3 3344456789999999999999999999944333
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-31 Score=286.44 Aligned_cols=227 Identities=27% Similarity=0.378 Sum_probs=181.0
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV~ 721 (975)
++|++.+.||.|+||.||+|.+..+++.||||.+..... .......+++|+||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 579999999999999999999999999999997754211 11112567889999
Q ss_pred eccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 722 DYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
||+++++|.+++... ....+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~- 160 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT- 160 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC-
Confidence 999999999998642 23468999999999999999999999999999999999999999999999999885543110
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCH--H
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR--Q 877 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~--~ 877 (975)
.......|+..|+|||++.+..++.++|+||||+++|+|++|..||.+... .
T Consensus 161 --------------------------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~ 214 (267)
T cd08229 161 --------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY 214 (267)
T ss_pred --------------------------cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHH
Confidence 011234688999999999998899999999999999999999999976433 2
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
.....+.............+..+.++|.+||..||++||| +.+|+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~i~ 259 (267)
T cd08229 215 SLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPD----ITYVY 259 (267)
T ss_pred HHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCC----HHHHH
Confidence 3333333332222222347789999999999999999999 66554
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.5e-31 Score=295.71 Aligned_cols=235 Identities=25% Similarity=0.392 Sum_probs=183.8
Q ss_pred CcccccccccCCceEEEEEEEeCC--CeEEEEEEeccch--------------hcccc-----------------ccCCe
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGS--GQYFAMKAMDKGV--------------MLNRN-----------------KTKTH 716 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t--~~~vAiK~l~~~~--------------~~~~~-----------------~~~~~ 716 (975)
+|++.+.||.|+||.||++.+..+ ++.||+|.+.... ++... .....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 488999999999999999999888 8999999876321 00000 11245
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
+|++|+|+ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 ~~~~~e~~-~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~ 157 (332)
T cd07857 81 LYLYEELM-EADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSE 157 (332)
T ss_pred EEEEEecc-cCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceeccc
Confidence 78999999 57999998653 5689999999999999999999999999999999999999999999999999965432
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
.... .........|++.|+|||.+.+ ..++.++|||||||++|+|++|.+||.+.+
T Consensus 158 ~~~~-----------------------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~ 214 (332)
T cd07857 158 NPGE-----------------------NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKD 214 (332)
T ss_pred cccc-----------------------ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCC
Confidence 1100 0011234578999999998866 568899999999999999999999998766
Q ss_pred HHHHHHHHHhcC----------------------------CCCC-CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 876 RQKTFANILHKD----------------------------LKFP-SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 876 ~~~~~~~i~~~~----------------------------~~~p-~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
....+..++... ..+. .....+..+.+||.+||++||.+||| +.+++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t----~~~ll 290 (332)
T cd07857 215 YVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRIS----VEEAL 290 (332)
T ss_pred HHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCC----HHHHh
Confidence 554444333210 0000 01235778999999999999999999 99999
Q ss_pred cCCCccCC
Q 002051 927 KHPFFKGV 934 (975)
Q Consensus 927 ~Hp~f~~~ 934 (975)
.||||+..
T Consensus 291 ~~~~~~~~ 298 (332)
T cd07857 291 EHPYLAIW 298 (332)
T ss_pred cChhhhhh
Confidence 99999644
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=282.39 Aligned_cols=228 Identities=28% Similarity=0.446 Sum_probs=190.9
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEEEEEec
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCLITDY 723 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~lV~Ey 723 (975)
+|++.++||.|+||.||++.+..+++.||+|.+..... ..........|+||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 58899999999999999999999999999999865321 1111256789999999
Q ss_pred cCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 724 CPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 724 ~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
+++++|.+++... ....+++..+..++.|++.||.|||++|++|+||+|+||+++.++.+||+|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~---- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN---- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC----
Confidence 9999999998662 2246899999999999999999999999999999999999999999999999998554311
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~ 881 (975)
......+++.|++||.+.+..++.++|+||||+++|+|++|+.||...+......
T Consensus 157 -------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~ 211 (256)
T cd08530 157 -------------------------MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRY 211 (256)
T ss_pred -------------------------CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 1112357889999999999889999999999999999999999999888776666
Q ss_pred HHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 882 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 882 ~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
.+....... .....+.++.++|.+||..+|++||| +.++++||++
T Consensus 212 ~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~~l~~p~~ 256 (256)
T cd08530 212 KVQRGKYPP-IPPIYSQDLQNFIRSMLQVKPKLRPN----CDKILASPAV 256 (256)
T ss_pred HHhcCCCCC-CchhhCHHHHHHHHHHcCCCcccCCC----HHHHhcCCCC
Confidence 665544332 22357889999999999999999999 9999999974
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-33 Score=330.97 Aligned_cols=234 Identities=28% Similarity=0.464 Sum_probs=190.3
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEEEEEec
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCLITDY 723 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~lV~Ey 723 (975)
++....+||.|.||.||.|.+..+|...|+|-++.... +........+||.|||
T Consensus 1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEy 1315 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEY 1315 (1509)
T ss_pred eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHH
Confidence 57778899999999999999999999999997653211 1111245667899999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
|.||+|.+++... +..++...+-+..|++.|+.|||++|||||||||.|||++.+|.+|++|||.|..+..+-+.
T Consensus 1316 C~~GsLa~ll~~g--ri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~--- 1390 (1509)
T KOG4645|consen 1316 CEGGSLASLLEHG--RIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQT--- 1390 (1509)
T ss_pred hccCcHHHHHHhc--chhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhc---
Confidence 9999999999873 56888899999999999999999999999999999999999999999999999775433111
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC---CCCChhHHHHHHHHHHHHHhCCCCCCCCC-HHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA---GHTSAVDWWALGILLYEMLYGYTPFRGKT-RQKT 879 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~---~~~~k~DIWSLG~il~ell~G~~Pf~~~~-~~~~ 879 (975)
-........||+.|||||++.+. +...++|||||||++.||+||+-||...+ +..+
T Consensus 1391 --------------------~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aI 1450 (1509)
T KOG4645|consen 1391 --------------------MPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAI 1450 (1509)
T ss_pred --------------------CCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHH
Confidence 01223357899999999999764 35678999999999999999999997744 4455
Q ss_pred HHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 880 ~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
++.+..+.. .+.+..+|.+.++||.+||+.||.+|++ +.|||.|-|-+.
T Consensus 1451 My~V~~gh~-Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~----~~qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1451 MYHVAAGHK-PQIPERLSSEGRDFLEHCLEQDPKMRWT----ASQLLEHAFGKS 1499 (1509)
T ss_pred HhHHhccCC-CCCchhhhHhHHHHHHHHHhcCchhhhH----HHHHHHhhcccc
Confidence 555555432 2333348999999999999999999999 999999988654
|
|
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-31 Score=293.92 Aligned_cols=234 Identities=22% Similarity=0.305 Sum_probs=182.5
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeC-------CCeEEEEEEeccchh--------------------------ccc
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVM--------------------------LNR 710 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~-------t~~~vAiK~l~~~~~--------------------------~~~ 710 (975)
+.+..++|.+.+.||+|+||.||+|++.. +...+|+|.++.... ...
T Consensus 13 ~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 92 (307)
T cd05098 13 WEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA 92 (307)
T ss_pred ceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence 34556789999999999999999998753 235799999874310 011
Q ss_pred cccCCeEEEEEeccCCCCHHHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 002051 711 NKTKTHVCLITDYCPGGELFLLLDRQPT--------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 776 (975)
Q Consensus 711 ~~~~~~~~lV~Ey~~ggsL~~~l~~~~~--------------~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NIL 776 (975)
......+|+||||+++|+|.+++..... ..++...+..++.||+.||+|||++|++||||||+|||
T Consensus 93 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nil 172 (307)
T cd05098 93 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 172 (307)
T ss_pred EecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheE
Confidence 1245678999999999999999976421 34888999999999999999999999999999999999
Q ss_pred EecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHH
Q 002051 777 LQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWA 856 (975)
Q Consensus 777 l~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWS 856 (975)
++.++.+||+|||.+........ ........+++.|+|||++.+..++.++||||
T Consensus 173 l~~~~~~kL~dfg~a~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws 227 (307)
T cd05098 173 VTEDNVMKIADFGLARDIHHIDY-------------------------YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 227 (307)
T ss_pred EcCCCcEEECCCcccccccccch-------------------------hhccccCCCccceeChHHhccCCCCcHHHHHH
Confidence 99999999999999855321100 00011123457899999999888999999999
Q ss_pred HHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 857 LGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 857 LG~il~ell~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
|||++|+|++ |..||.+....+....+.. ....+.+...+.++.+||.+||..+|.+||| +.+++.
T Consensus 228 lG~~l~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~evl~ 294 (307)
T cd05098 228 FGVLLWEIFTLGGSPYPGVPVEELFKLLKE-GHRMDKPSNCTNELYMMMRDCWHAVPSQRPT----FKQLVE 294 (307)
T ss_pred HHHHHHHHHcCCCCCCCcCCHHHHHHHHHc-CCCCCCCCcCCHHHHHHHHHHcccChhhCcC----HHHHHH
Confidence 9999999998 8999987776555554443 3333444557889999999999999999999 666654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.1e-31 Score=302.46 Aligned_cols=236 Identities=22% Similarity=0.302 Sum_probs=187.6
Q ss_pred cccccCCCcccccccccCCceEEEEEEEe-----CCCeEEEEEEeccchh-------------c-------------ccc
Q 002051 663 GEQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVM-------------L-------------NRN 711 (975)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~-----~t~~~vAiK~l~~~~~-------------~-------------~~~ 711 (975)
.+.+..++|.+.++||+|+||.||+|++. .+++.||+|+++.... + ...
T Consensus 31 ~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~ 110 (401)
T cd05107 31 AWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGAC 110 (401)
T ss_pred cceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEE
Confidence 35567778999999999999999999964 3567899999875310 0 011
Q ss_pred ccCCeEEEEEeccCCCCHHHHHhhCC------------------------------------------------------
Q 002051 712 KTKTHVCLITDYCPGGELFLLLDRQP------------------------------------------------------ 737 (975)
Q Consensus 712 ~~~~~~~lV~Ey~~ggsL~~~l~~~~------------------------------------------------------ 737 (975)
....++|+|||||++|+|.+++....
T Consensus 111 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (401)
T cd05107 111 TKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYV 190 (401)
T ss_pred ccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCcc
Confidence 14567899999999999999996531
Q ss_pred ------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 002051 738 ------------------------------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 775 (975)
Q Consensus 738 ------------------------------------------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NI 775 (975)
...++...+..++.||+.||.|||+++|+||||||+||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~Ni 270 (401)
T cd05107 191 PMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNV 270 (401)
T ss_pred chhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceE
Confidence 12367778889999999999999999999999999999
Q ss_pred EEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHH
Q 002051 776 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 855 (975)
Q Consensus 776 Ll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIW 855 (975)
|++.++.+||+|||+++....... ........+++.|+|||.+.+..++.++|||
T Consensus 271 Ll~~~~~~kL~DfGla~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw 325 (401)
T cd05107 271 LICEGKLVKICDFGLARDIMRDSN-------------------------YISKGSTFLPLKWMAPESIFNNLYTTLSDVW 325 (401)
T ss_pred EEeCCCEEEEEecCcceecccccc-------------------------cccCCCcCCCCceeChHHhcCCCCCcHhHHH
Confidence 999999999999999865321100 0111234578899999999988899999999
Q ss_pred HHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 856 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 856 SLG~il~ell~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
||||++|+|++ |..||......+.+...+.....++.+..++..+.+||.+||..+|.+||+ +++|+.
T Consensus 326 slGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs----~~ell~ 394 (401)
T cd05107 326 SFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPD----FSQLVH 394 (401)
T ss_pred HHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcC----HHHHHH
Confidence 99999999997 899998766666666655555555555567899999999999999999999 777764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-31 Score=293.96 Aligned_cols=230 Identities=22% Similarity=0.327 Sum_probs=181.9
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCe--EEEEEEeccch-----------------h---------ccccccCCeE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ--YFAMKAMDKGV-----------------M---------LNRNKTKTHV 717 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~--~vAiK~l~~~~-----------------~---------~~~~~~~~~~ 717 (975)
+..++|++.+.||+|+||.||+|.+..++. .+|+|.+.... + .........+
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~ 83 (303)
T cd05088 4 LEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 83 (303)
T ss_pred cchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCc
Confidence 456789999999999999999999987775 45777765321 0 1111256678
Q ss_pred EEEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcE
Q 002051 718 CLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHV 783 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~v 783 (975)
|+||||+++++|.+++.... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVA 163 (303)
T ss_pred eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcE
Confidence 99999999999999997532 2357899999999999999999999999999999999999999999
Q ss_pred EEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHH
Q 002051 784 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE 863 (975)
Q Consensus 784 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~e 863 (975)
||+|||++...... .......++..|+|||.+.+..++.++|||||||++|+
T Consensus 164 kl~dfg~~~~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e 215 (303)
T cd05088 164 KIADFGLSRGQEVY----------------------------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 215 (303)
T ss_pred EeCccccCcccchh----------------------------hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHH
Confidence 99999988432100 00111234667999999988889999999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 864 MLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 864 ll~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
|++ |..||.+.+..+....+.. ..........+..+.+||.+||+.+|++||+ +.+++.+
T Consensus 216 llt~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~ 276 (303)
T cd05088 216 IVSLGGTPYCGMTCAELYEKLPQ-GYRLEKPLNCDDEVYDLMRQCWREKPYERPS----FAQILVS 276 (303)
T ss_pred HHhcCCCCcccCChHHHHHHHhc-CCcCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHHH
Confidence 998 9999988777666655533 2233333456789999999999999999999 7777754
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=283.84 Aligned_cols=227 Identities=27% Similarity=0.389 Sum_probs=181.1
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV~ 721 (975)
++|++.+.||.|+||.||+|.+..+|+.||+|.++.... .......+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 579999999999999999999999999999998753211 11112567789999
Q ss_pred eccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 722 DYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
||+++++|..++... ....+++..+..++.||+.||.|||+.||+|+||||+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~- 160 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT- 160 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCC-
Confidence 999999999998652 23468999999999999999999999999999999999999999999999999885532110
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC--HH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT--RQ 877 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~--~~ 877 (975)
.......|++.|+|||.+.+..++.++|+|||||++|+|++|..||.... ..
T Consensus 161 --------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~ 214 (267)
T cd08224 161 --------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY 214 (267)
T ss_pred --------------------------cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHH
Confidence 11123468889999999999889999999999999999999999996543 22
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
.....+..+..........+..+.++|.+||..+|++||| +.+|+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~----~~~il 259 (267)
T cd08224 215 SLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPD----ISYVL 259 (267)
T ss_pred HHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCC----HHHHH
Confidence 3333333332221112256778999999999999999999 77665
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=282.06 Aligned_cols=221 Identities=22% Similarity=0.340 Sum_probs=175.7
Q ss_pred cccccCCceEEEEEEEeCCCeEEEEEEeccch-------------------------hccccccCCeEEEEEeccCCCCH
Q 002051 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------------------MLNRNKTKTHVCLITDYCPGGEL 729 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------------------~~~~~~~~~~~~lV~Ey~~ggsL 729 (975)
+.||+|+||.||+|.++.+++.||+|.+.... +.........+|+||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 46999999999999999999999999875321 01112256678999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhh
Q 002051 730 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 809 (975)
Q Consensus 730 ~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 809 (975)
.+++... ...+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~---------- 149 (252)
T cd05084 81 LTFLRTE-GPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVY---------- 149 (252)
T ss_pred HHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccc----------
Confidence 9999754 34589999999999999999999999999999999999999999999999999854321000
Q ss_pred hccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCC
Q 002051 810 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDL 888 (975)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~~i~~~~~ 888 (975)
........++..|+|||.+.+..++.++|||||||++|+|++ |..||...+.......+.. ..
T Consensus 150 ---------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~-~~ 213 (252)
T cd05084 150 ---------------ASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQ-GV 213 (252)
T ss_pred ---------------cccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHc-CC
Confidence 000011123457999999998889999999999999999997 9999987766555554443 23
Q ss_pred CCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 889 KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 889 ~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
..+.....+..+.+|+.+||+++|++||| +.+++
T Consensus 214 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~~~ 247 (252)
T cd05084 214 RLPCPELCPDAVYRLMERCWEYDPGQRPS----FSTVH 247 (252)
T ss_pred CCCCcccCCHHHHHHHHHHcCCChhhCcC----HHHHH
Confidence 33444557889999999999999999999 77765
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=286.47 Aligned_cols=231 Identities=20% Similarity=0.293 Sum_probs=181.0
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCe----EEEEEEeccchh-------------cccc-----------ccCCeE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVM-------------LNRN-----------KTKTHV 717 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~----~vAiK~l~~~~~-------------~~~~-----------~~~~~~ 717 (975)
+..++|++++.||.|+||+||+|.+..+++ .+++|.+..... +... ......
T Consensus 4 ~~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~ 83 (279)
T cd05111 4 LKETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASL 83 (279)
T ss_pred CCHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCcc
Confidence 456789999999999999999999987776 477777643210 0000 023456
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
++|+||+++|+|.+++... ...+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||+++.....
T Consensus 84 ~~i~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T cd05111 84 QLVTQLSPLGSLLDHVRQH-RDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPD 162 (279)
T ss_pred EEEEEeCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCC
Confidence 8999999999999999764 346899999999999999999999999999999999999999999999999998654211
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 876 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~ 876 (975)
.. ........++..|+|||.+.+..++.++|||||||++|+|++ |..||.+...
T Consensus 163 ~~-------------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~ 217 (279)
T cd05111 163 DK-------------------------KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP 217 (279)
T ss_pred Cc-------------------------ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 00 001123456778999999998889999999999999999997 9999988776
Q ss_pred HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 877 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 877 ~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
......+ ......+....++..+.+++.+||..||++||| +.|+++
T Consensus 218 ~~~~~~~-~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps----~~el~~ 263 (279)
T cd05111 218 HEVPDLL-EKGERLAQPQICTIDVYMVMVKCWMIDENVRPT----FKELAN 263 (279)
T ss_pred HHHHHHH-HCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcC----HHHHHH
Confidence 5544444 333333334446778999999999999999999 666654
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=282.53 Aligned_cols=229 Identities=28% Similarity=0.445 Sum_probs=185.8
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------------ccccccCCeEEEE
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------------LNRNKTKTHVCLI 720 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------------~~~~~~~~~~~lV 720 (975)
+|.+.+.||+|+||.||++.+..++..+++|+++.... ..........|+|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 58999999999999999999988877777777653211 1111256678999
Q ss_pred EeccCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 721 TDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
|||+++++|.+++.. .....+++..++.++.|++.||.|||++|++|+||||+||+++. +.++|+|||.+......
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~- 158 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGS- 158 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCC-
Confidence 999999999998864 23356899999999999999999999999999999999999975 57999999988553211
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~ 878 (975)
........|++.|+|||.+.+..++.++|+||||+++|+|++|..||.......
T Consensus 159 --------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~ 212 (260)
T cd08222 159 --------------------------CDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS 212 (260)
T ss_pred --------------------------cccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 011223467889999999988888999999999999999999999998777666
Q ss_pred HHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 879 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 879 ~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
....+....... .....+.++.++|.+||..+|++||+ +.+++.||||
T Consensus 213 ~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~ 260 (260)
T cd08222 213 VVLRIVEGPTPS-LPETYSRQLNSIMQSMLNKDPSLRPS----AAEILRNPFI 260 (260)
T ss_pred HHHHHHcCCCCC-CcchhcHHHHHHHHHHhcCChhhCcC----HHHHhhCCCC
Confidence 666655433221 22356789999999999999999999 9999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=291.90 Aligned_cols=228 Identities=27% Similarity=0.401 Sum_probs=188.8
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV~ 721 (975)
..|...+.||+|+||.||++++..++..||+|.+..... ..........|+||
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 104 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM 104 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence 358999999999999999999999999999999864210 01111456789999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
||+. |+|.+++... ...+++..+..++.||+.||.|||++||+||||+|+||+++.++.++|+|||++....
T Consensus 105 e~~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~------ 176 (317)
T cd06635 105 EYCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIAS------ 176 (317)
T ss_pred eCCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccC------
Confidence 9995 5888877653 3568999999999999999999999999999999999999999999999999874322
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhc---CCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~ 878 (975)
......|++.|+|||.+. ...++.++|||||||++|+|++|..||.......
T Consensus 177 -------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~ 231 (317)
T cd06635 177 -------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 231 (317)
T ss_pred -------------------------CcccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 112346888999999984 3567889999999999999999999998877777
Q ss_pred HHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 879 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 879 ~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
....+.............+..+.+||.+||+.+|.+||+ +.+++.|+|+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~il~~~~~~~ 282 (317)
T cd06635 232 ALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPT----SEELLKHMFVLR 282 (317)
T ss_pred HHHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcC----HHHHHhChhhhc
Confidence 777776655444444557888999999999999999999 999999999954
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=279.32 Aligned_cols=228 Identities=31% Similarity=0.507 Sum_probs=188.3
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh------------------------ccccccCCeEEEEEeccC
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM------------------------LNRNKTKTHVCLITDYCP 725 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~------------------------~~~~~~~~~~~lV~Ey~~ 725 (975)
+|.+.+.||.|+||.||++.+..+++.+++|++..... ..........|+++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 48889999999999999999998999999999865431 111124577899999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcc
Q 002051 726 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 805 (975)
Q Consensus 726 ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 805 (975)
|++|.+++.... ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~------- 152 (253)
T cd05122 81 GGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK------- 152 (253)
T ss_pred CCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccccc-------
Confidence 999999997642 468999999999999999999999999999999999999999999999999885543110
Q ss_pred hhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q 002051 806 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH 885 (975)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~ 885 (975)
......|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+.......+..
T Consensus 153 ---------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 211 (253)
T cd05122 153 ---------------------ARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT 211 (253)
T ss_pred ---------------------cccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh
Confidence 02345688999999999988889999999999999999999999987755554444443
Q ss_pred cC-CCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCC
Q 002051 886 KD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930 (975)
Q Consensus 886 ~~-~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~ 930 (975)
.. ...+....++..+.++|.+||+.||.+||| +.+++.|||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t----~~~~l~~~~ 253 (253)
T cd05122 212 NGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPT----AEQLLKHPF 253 (253)
T ss_pred cCCCCcCcccccCHHHHHHHHHHccCChhhCCC----HHHHhcCCC
Confidence 22 222333334788999999999999999999 999999998
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=281.49 Aligned_cols=231 Identities=29% Similarity=0.444 Sum_probs=189.3
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccC--CeEEEEE
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTK--THVCLIT 721 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~--~~~~lV~ 721 (975)
+|.+.+.||+|++|.||+|.+..+++.|++|++..... ....... ..+++||
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 47888999999999999999999999999998865431 0111134 7899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
||+++++|.+++... ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||.+.........
T Consensus 81 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~- 157 (260)
T cd06606 81 EYVSGGSLSSLLKKF--GKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG- 157 (260)
T ss_pred EecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc-
Confidence 999999999999875 37999999999999999999999999999999999999999999999999998654322100
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC-HHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT-RQKTF 880 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~-~~~~~ 880 (975)
.......++..|+|||.+.+..++.++||||||+++|+|++|..||.... .....
T Consensus 158 ------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~ 213 (260)
T cd06606 158 ------------------------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAAL 213 (260)
T ss_pred ------------------------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHH
Confidence 01233568899999999998889999999999999999999999998765 33333
Q ss_pred HHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 881 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 881 ~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
..+.........+...+..+.+||.+||..||++||+ +.+++.||||
T Consensus 214 ~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~----~~~ll~~~~~ 260 (260)
T cd06606 214 YKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPT----ADELLQHPFL 260 (260)
T ss_pred HhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCC----HHHHhhCCCC
Confidence 3333322223333456889999999999999999999 9999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=287.44 Aligned_cols=231 Identities=20% Similarity=0.294 Sum_probs=184.1
Q ss_pred ccCCCcccccccccCCceEEEEEEEe-----CCCeEEEEEEeccch------------------------hccccccCCe
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGV------------------------MLNRNKTKTH 716 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~-----~t~~~vAiK~l~~~~------------------------~~~~~~~~~~ 716 (975)
+...+|.+.++||+|+||.||++... .++..+|+|.+.... +.........
T Consensus 2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (280)
T cd05092 2 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRP 81 (280)
T ss_pred CChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCc
Confidence 44568999999999999999999743 356789999876421 1112225677
Q ss_pred EEEEEeccCCCCHHHHHhhCCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcE
Q 002051 717 VCLITDYCPGGELFLLLDRQPT-------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHV 783 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~-------------~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~v 783 (975)
+|+||||+++++|.+++..... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 82 LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCE
Confidence 8999999999999999976422 358899999999999999999999999999999999999999999
Q ss_pred EEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHH
Q 002051 784 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE 863 (975)
Q Consensus 784 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~e 863 (975)
||+|||++........ ........+++.|+|||.+.+..++.++|||||||++|+
T Consensus 162 kL~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e 216 (280)
T cd05092 162 KIGDFGMSRDIYSTDY-------------------------YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWE 216 (280)
T ss_pred EECCCCceeEcCCCce-------------------------eecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHH
Confidence 9999999864321100 011123345788999999999999999999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 864 MLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 864 ll~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
|++ |.+||........+..+.... ....+..++..+.+||.+||+.||.+||+ +++|+
T Consensus 217 l~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~P~~Rp~----~~~l~ 275 (280)
T cd05092 217 IFTYGKQPWYQLSNTEAIECITQGR-ELERPRTCPPEVYAIMQGCWQREPQQRMV----IKDIH 275 (280)
T ss_pred HHcCCCCCCccCCHHHHHHHHHcCc-cCCCCCCCCHHHHHHHHHHccCChhhCCC----HHHHH
Confidence 998 999998877777666665543 23334457889999999999999999999 66665
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=289.36 Aligned_cols=226 Identities=22% Similarity=0.313 Sum_probs=179.9
Q ss_pred CCcccccccccCCceEEEEEEEeCCCe--EEEEEEeccch-------------hc-------------cccccCCeEEEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQ--YFAMKAMDKGV-------------ML-------------NRNKTKTHVCLI 720 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~--~vAiK~l~~~~-------------~~-------------~~~~~~~~~~lV 720 (975)
++|++.+.||+|+||.||+|..+.++. .+++|.++... ++ ........+|+|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 579999999999999999999987764 46888776311 00 111144568999
Q ss_pred EeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEe
Q 002051 721 TDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLT 786 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~ 786 (975)
|||+++++|.+++.... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~ 161 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIA 161 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEEC
Confidence 99999999999997532 1358889999999999999999999999999999999999999999999
Q ss_pred eccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh
Q 002051 787 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY 866 (975)
Q Consensus 787 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~ 866 (975)
|||++...... ........+..|+|||++.+..++.++|||||||++|+|++
T Consensus 162 dfg~~~~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t 213 (297)
T cd05089 162 DFGLSRGEEVY----------------------------VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVS 213 (297)
T ss_pred CcCCCccccce----------------------------eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHc
Confidence 99988432100 00011123557999999998889999999999999999997
Q ss_pred -CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 867 -GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 867 -G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
|..||.+.+.......+... ...+.+..++..+.+||.+||+.+|.+||| ++++++
T Consensus 214 ~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~i~~ 270 (297)
T cd05089 214 LGGTPYCGMTCAELYEKLPQG-YRMEKPRNCDDEVYELMRQCWRDRPYERPP----FAQISV 270 (297)
T ss_pred CCCCCCCCCCHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 99999988887777666553 333334457889999999999999999999 666653
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=281.10 Aligned_cols=224 Identities=24% Similarity=0.367 Sum_probs=185.2
Q ss_pred cccccCCceEEEEEEEeCC---CeEEEEEEeccchhc-------------------------cccccCCeEEEEEeccCC
Q 002051 675 KPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVML-------------------------NRNKTKTHVCLITDYCPG 726 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t---~~~vAiK~l~~~~~~-------------------------~~~~~~~~~~lV~Ey~~g 726 (975)
+.||+|+||.||+|.+... +..||+|.+...... ........+++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 4699999999999999866 899999998754211 111256788999999999
Q ss_pred CCHHHHHhhCC-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 727 GELFLLLDRQP-------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 727 gsL~~~l~~~~-------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
++|.+++.... ...+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||.+........
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~ 160 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY 160 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccccc
Confidence 99999998641 35699999999999999999999999999999999999999999999999999865432110
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK 878 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~ 878 (975)
........+++.|+|||.+....++.++|||||||++|+|++ |..||.......
T Consensus 161 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~ 215 (262)
T cd00192 161 -------------------------YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE 215 (262)
T ss_pred -------------------------cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 011233457889999999988889999999999999999998 699999888777
Q ss_pred HHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 879 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 879 ~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
....+... ...+....++.++.+++.+||+.+|.+||| +.++++|
T Consensus 216 ~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~l~~~ 260 (262)
T cd00192 216 VLEYLRKG-YRLPKPEYCPDELYELMLSCWQLDPEDRPT----FSELVER 260 (262)
T ss_pred HHHHHHcC-CCCCCCccCChHHHHHHHHHccCCcccCcC----HHHHHHh
Confidence 77766653 333444557899999999999999999999 8998865
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=292.33 Aligned_cols=231 Identities=24% Similarity=0.355 Sum_probs=175.2
Q ss_pred CceEEEEEEEeCCCeEEEEEEeccch--------------------------hccccccCCeEEEEEeccCCCCHHHHHh
Q 002051 681 DTGSVHLVELCGSGQYFAMKAMDKGV--------------------------MLNRNKTKTHVCLITDYCPGGELFLLLD 734 (975)
Q Consensus 681 ~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------------~~~~~~~~~~~~lV~Ey~~ggsL~~~l~ 734 (975)
++|.||++++..+++.||+|++.... +..........|++||||++++|.+++.
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~ 91 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLK 91 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHH
Confidence 45667777777799999999986541 0111225678899999999999999998
Q ss_pred hCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCC
Q 002051 735 RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKG 814 (975)
Q Consensus 735 ~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~ 814 (975)
......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||.+..........
T Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~------------- 158 (314)
T cd08216 92 THFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQ------------- 158 (314)
T ss_pred HhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccc-------------
Confidence 7555678999999999999999999999999999999999999999999999999886543211100
Q ss_pred CCCcccccccccccccccCCCCccchhhhcC--CCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC---
Q 002051 815 QQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK--- 889 (975)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~--- 889 (975)
...........++..|+|||++.+ ..++.++||||+||++|+|++|..||........+.....+...
T Consensus 159 -------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 231 (314)
T cd08216 159 -------RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLL 231 (314)
T ss_pred -------cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCcccc
Confidence 000111233467889999999976 35788999999999999999999999876554433322221110
Q ss_pred -----------------------------CCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCC
Q 002051 890 -----------------------------FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935 (975)
Q Consensus 890 -----------------------------~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~ 935 (975)
.+.....+.++.+||.+||++||++||| ++++|.||||+.+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~ll~~p~~~~~~ 302 (314)
T cd08216 232 DKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPS----ASQLLNHSFFKQCK 302 (314)
T ss_pred ccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcC----HHHHhcCchHhhhc
Confidence 0001123467889999999999999999 99999999998663
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-31 Score=308.75 Aligned_cols=239 Identities=29% Similarity=0.423 Sum_probs=204.2
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-----------hc------------------cccccCCe
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-----------ML------------------NRNKTKTH 716 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-----------~~------------------~~~~~~~~ 716 (975)
.+.+.|+|+..||.|.+|.||+++++.+++..|+|++.... ++ .....++.
T Consensus 16 dp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~Dq 95 (953)
T KOG0587|consen 16 DPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQ 95 (953)
T ss_pred CCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCe
Confidence 34567999999999999999999999999999999976432 00 01126788
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
++||||||.||+.-|+++...+..+.+..+..|++.+|.|+.+||.+.++|||||-.|||++.++.|||+|||++..++.
T Consensus 96 LWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQlds 175 (953)
T KOG0587|consen 96 LWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDS 175 (953)
T ss_pred EEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeeec
Confidence 99999999999999999987677899999999999999999999999999999999999999999999999999976542
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-----CCCCChhHHHHHHHHHHHHHhCCCCC
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPF 871 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~~~k~DIWSLG~il~ell~G~~Pf 871 (975)
. ....++++|||.|||||++.. ..|+..+|+||||++..||.-|.+|+
T Consensus 176 T---------------------------~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl 228 (953)
T KOG0587|consen 176 T---------------------------VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPL 228 (953)
T ss_pred c---------------------------cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCc
Confidence 1 234567899999999999854 35777999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCC
Q 002051 872 RGKTRQKTFANILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935 (975)
Q Consensus 872 ~~~~~~~~~~~i~~~~~-~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~ 935 (975)
....+...+..|-+... .+..+..++.++.+||..||.+|-.+||+ ..++|+|||++...
T Consensus 229 ~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~----~~~ll~hpFi~e~~ 289 (953)
T KOG0587|consen 229 CDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPS----TEELLKHPFITEQP 289 (953)
T ss_pred cCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcc----hhhhccCCcccccc
Confidence 99988777766655432 22234567899999999999999999999 99999999999654
|
|
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=289.10 Aligned_cols=233 Identities=24% Similarity=0.358 Sum_probs=184.2
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCC----------------eEEEEEEeccchh----------------------
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSG----------------QYFAMKAMDKGVM---------------------- 707 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~----------------~~vAiK~l~~~~~---------------------- 707 (975)
+..++|++++.||+|+||.||+|.+..++ ..||+|.+.....
T Consensus 2 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i 81 (296)
T cd05051 2 FPRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNI 81 (296)
T ss_pred CchhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCE
Confidence 34678999999999999999999886543 5689999875421
Q ss_pred ---ccccccCCeEEEEEeccCCCCHHHHHhhCC---------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 002051 708 ---LNRNKTKTHVCLITDYCPGGELFLLLDRQP---------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 775 (975)
Q Consensus 708 ---~~~~~~~~~~~lV~Ey~~ggsL~~~l~~~~---------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NI 775 (975)
........++++||||+.+++|.+++.... ...+++..++.++.|++.||.|||++||+|+||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Ni 161 (296)
T cd05051 82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNC 161 (296)
T ss_pred eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhce
Confidence 011124577899999999999999997642 12689999999999999999999999999999999999
Q ss_pred EEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHH
Q 002051 776 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 855 (975)
Q Consensus 776 Ll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIW 855 (975)
+++.++.++|+|||++....... .........+++.|+|||++.+..++.++|||
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~ 216 (296)
T cd05051 162 LVGKNYTIKIADFGMSRNLYSSD-------------------------YYRVQGRAPLPIRWMAWESVLLGKFTTKSDVW 216 (296)
T ss_pred eecCCCceEEccccceeecccCc-------------------------ceeecCcCCCCceecCHHHhhcCCCCccchhh
Confidence 99999999999999985432110 00112234567889999999988899999999
Q ss_pred HHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhc------CCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 856 ALGILLYEMLY--GYTPFRGKTRQKTFANILHK------DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 856 SLG~il~ell~--G~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
||||++|+|++ |..||...+....+..+... ....+.....+.++.+|+.+||+.||.+||| +.+|++
T Consensus 217 slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt----~~el~~ 292 (296)
T cd05051 217 AFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPT----FREIHL 292 (296)
T ss_pred hhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCC----HHHHHH
Confidence 99999999997 78899877776666665432 1122333446789999999999999999999 888753
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=284.94 Aligned_cols=227 Identities=22% Similarity=0.291 Sum_probs=178.2
Q ss_pred cccccccccCCceEEEEEEEeCCCe--EEEEEEeccchh-----------------------c---ccc------ccCCe
Q 002051 671 FRPIKPLGSGDTGSVHLVELCGSGQ--YFAMKAMDKGVM-----------------------L---NRN------KTKTH 716 (975)
Q Consensus 671 y~i~~~LG~G~fG~Vy~a~~~~t~~--~vAiK~l~~~~~-----------------------~---~~~------~~~~~ 716 (975)
|.+.+.||+|+||.||+|.+..++. .+|+|.++.... . ... .....
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 4577899999999999999977765 699998754210 0 000 01235
Q ss_pred EEEEEeccCCCCHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCC
Q 002051 717 VCLITDYCPGGELFLLLDRQ----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 792 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~----~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~ 792 (975)
.++||||+.+|+|.+++... ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 160 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSK 160 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCccc
Confidence 68999999999999987532 22458999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCC
Q 002051 793 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPF 871 (975)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf 871 (975)
....... ........+++.|++||++.+..++.++|||||||++|+|++ |..||
T Consensus 161 ~~~~~~~-------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~ 215 (272)
T cd05075 161 KIYNGDY-------------------------YRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPY 215 (272)
T ss_pred ccCcccc-------------------------eecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCC
Confidence 5431100 001122346778999999999889999999999999999998 89999
Q ss_pred CCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 872 RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 872 ~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
.+.........+..+.. .+....++..+.++|.+||+.||++||| +.+|++
T Consensus 216 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~l~~ 266 (272)
T cd05075 216 PGVENSEIYDYLRQGNR-LKQPPDCLDGLYSLMSSCWLLNPKDRPS----FETLRC 266 (272)
T ss_pred CCCCHHHHHHHHHcCCC-CCCCCCCCHHHHHHHHHHcCCCcccCcC----HHHHHH
Confidence 88777776666655432 3334457788999999999999999999 777764
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-32 Score=273.64 Aligned_cols=239 Identities=24% Similarity=0.382 Sum_probs=189.9
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccc--------------hhccc---------------c-----
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKG--------------VMLNR---------------N----- 711 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~--------------~~~~~---------------~----- 711 (975)
...+.|..+.+||+|.||.||+|+.+.+|+.||+|+..-+ .++.. .
T Consensus 14 ~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~ 93 (376)
T KOG0669|consen 14 DEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTN 93 (376)
T ss_pred ecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcc
Confidence 3456799999999999999999999999999999854210 01100 0
Q ss_pred ccCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCC
Q 002051 712 KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 791 (975)
Q Consensus 712 ~~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a 791 (975)
.+...+|+||.+| ..+|..++... ...++..++++++.+++.||.|+|++.|+|||+||+|+||+.+|.+||+|||++
T Consensus 94 r~r~t~ylVf~~c-ehDLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGla 171 (376)
T KOG0669|consen 94 RDRATFYLVFDFC-EHDLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLA 171 (376)
T ss_pred cccceeeeeHHHh-hhhHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccc
Confidence 1445699999999 55999998653 346999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCC
Q 002051 792 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP 870 (975)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~P 870 (975)
+.++......- ......+-|..|++||.++|. .|+++.|||+.||++.+|+++.+.
T Consensus 172 r~fs~~~n~~k-----------------------prytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspi 228 (376)
T KOG0669|consen 172 RAFSTSKNVVK-----------------------PRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPI 228 (376)
T ss_pred cceecccccCC-----------------------CCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCcc
Confidence 87653321110 112234669999999999874 689999999999999999999999
Q ss_pred CCCCCHHHHHHHHHh--cC-----------------C---CCCC-----------CCCCcHHHHHHHHHhcccCccccCC
Q 002051 871 FRGKTRQKTFANILH--KD-----------------L---KFPS-----------STPTSLHAKQLMYRLLHRDPKSRLG 917 (975)
Q Consensus 871 f~~~~~~~~~~~i~~--~~-----------------~---~~p~-----------~~~~s~~~~~li~~~L~~dP~~R~t 917 (975)
|.+++....+..|.. +. + ++|. +..-++++.+||.+||.+||.+|+.
T Consensus 229 mqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ 308 (376)
T KOG0669|consen 229 MQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRID 308 (376)
T ss_pred ccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcc
Confidence 999999888776643 11 1 0111 0112447889999999999999999
Q ss_pred ChhhHHHHHcCCCccC
Q 002051 918 SHEGANEIKKHPFFKG 933 (975)
Q Consensus 918 ~~~~~~elL~Hp~f~~ 933 (975)
++++|.|.||..
T Consensus 309 ----ad~alnh~~F~k 320 (376)
T KOG0669|consen 309 ----ADQALNHDFFWK 320 (376)
T ss_pred ----hHhhhchhhhhc
Confidence 999999999963
|
|
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.9e-31 Score=283.95 Aligned_cols=225 Identities=21% Similarity=0.356 Sum_probs=181.9
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc----------cc-----------cccCCeEEEEEecc
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML----------NR-----------NKTKTHVCLITDYC 724 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~----------~~-----------~~~~~~~~lV~Ey~ 724 (975)
+..++|++.+.||+|+||.||++.. +++.||+|.++..... .. .......|+||||+
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~ 80 (254)
T cd05083 3 LNLQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELM 80 (254)
T ss_pred ccHHHceeeeeeccCCCCceEeccc--CCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECC
Confidence 3456899999999999999999864 7788999988643110 00 01234579999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCc
Q 002051 725 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 804 (975)
Q Consensus 725 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~ 804 (975)
.+++|.+++.......+++..+..++.|++.||.|||++|++||||||+|||++.++.+||+|||++......
T Consensus 81 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~------- 153 (254)
T cd05083 81 SKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG------- 153 (254)
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceecccc-------
Confidence 9999999998765557899999999999999999999999999999999999999999999999988542100
Q ss_pred chhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 002051 805 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANI 883 (975)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~~i 883 (975)
......+..|+|||.+.+..++.++|+|||||++|+|++ |.+||...+..+....+
T Consensus 154 -----------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~ 210 (254)
T cd05083 154 -----------------------VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECV 210 (254)
T ss_pred -----------------------CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHH
Confidence 011234567999999998889999999999999999997 99999888777666555
Q ss_pred HhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 884 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 884 ~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
... ...+....++..+.+++.+||+.+|++||+ +++|+.
T Consensus 211 ~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~l~~ 249 (254)
T cd05083 211 EKG-YRMEPPEGCPADVYVLMTSCWETEPKKRPS----FHKLRE 249 (254)
T ss_pred hCC-CCCCCCCcCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 443 333334557889999999999999999999 776653
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=289.10 Aligned_cols=230 Identities=21% Similarity=0.315 Sum_probs=183.4
Q ss_pred cCCCcccccccccCCceEEEEEEEeC-----CCeEEEEEEeccchh------------------------ccccccCCeE
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVM------------------------LNRNKTKTHV 717 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-----t~~~vAiK~l~~~~~------------------------~~~~~~~~~~ 717 (975)
...+|.+.+.||+|+||.||+|.+.. ++..+++|.+..... ..........
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 82 (291)
T cd05094 3 KRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPL 82 (291)
T ss_pred chHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCce
Confidence 45679999999999999999998643 456799998764321 1111256678
Q ss_pred EEEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcE
Q 002051 718 CLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHV 783 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~v 783 (975)
++||||+++++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~ 162 (291)
T cd05094 83 IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLV 162 (291)
T ss_pred EEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcE
Confidence 99999999999999997542 2348899999999999999999999999999999999999999999
Q ss_pred EEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHH
Q 002051 784 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE 863 (975)
Q Consensus 784 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~e 863 (975)
+|+|||++........ ........++..|+|||.+.+..++.++|||||||++|+
T Consensus 163 ~l~dfg~a~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e 217 (291)
T cd05094 163 KIGDFGMSRDVYSTDY-------------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWE 217 (291)
T ss_pred EECCCCcccccCCCce-------------------------eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHH
Confidence 9999999865331110 011123456889999999999989999999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 864 MLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 864 ll~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
|++ |..||...+.......+..+... ......+..+.+++.+||+.||.+||| +.+++
T Consensus 218 l~t~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~v~ 276 (291)
T cd05094 218 IFTYGKQPWFQLSNTEVIECITQGRVL-ERPRVCPKEVYDIMLGCWQREPQQRLN----IKEIY 276 (291)
T ss_pred HHhCCCCCCCCCCHHHHHHHHhCCCCC-CCCccCCHHHHHHHHHHcccChhhCcC----HHHHH
Confidence 998 99999888777766666554332 223346788999999999999999999 55554
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=292.29 Aligned_cols=253 Identities=26% Similarity=0.438 Sum_probs=192.7
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------cccc-ccCCeEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRN-KTKTHVCLI 720 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~-~~~~~~~lV 720 (975)
.++|++++.||.|+||.||+|.+..+++.||+|.+.+... .... ....++|+|
T Consensus 9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv 88 (328)
T cd07856 9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFV 88 (328)
T ss_pred ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEE
Confidence 5679999999999999999999999999999998754210 0011 134578999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 800 (975)
|||+ +++|..++.. ..+++..+..++.||+.||.|||++||+||||+|+|||++.++.++|+|||.+.....
T Consensus 89 ~e~~-~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~---- 160 (328)
T cd07856 89 TELL-GTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDP---- 160 (328)
T ss_pred eehh-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCC----
Confidence 9999 6799988864 4588899999999999999999999999999999999999999999999998854221
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
......+++.|+|||++.+ ..++.++|||||||++|+|++|++||.+......
T Consensus 161 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~ 214 (328)
T cd07856 161 --------------------------QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQ 214 (328)
T ss_pred --------------------------CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 1123467889999998866 5688999999999999999999999987665333
Q ss_pred HHHHHhc--------------------------CCCCCC---CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCC
Q 002051 880 FANILHK--------------------------DLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930 (975)
Q Consensus 880 ~~~i~~~--------------------------~~~~p~---~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~ 930 (975)
...+.+. ....+. ...++..+.++|++||+.+|++||| +.+++.|||
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t----~~ell~~~~ 290 (328)
T cd07856 215 FSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRIS----AAEALAHPY 290 (328)
T ss_pred HHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCC----HHHHhcCCc
Confidence 2221110 001111 1235788999999999999999999 999999999
Q ss_pred ccCCCcchhhccCCCCCCCCCcccCcccccccCCcch
Q 002051 931 FKGVNWALVRCMNPPELDAPLFATDTEKEYKVVDPGM 967 (975)
Q Consensus 931 f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 967 (975)
|.... .|. ..|+-...++|.....|-..
T Consensus 291 ~~~~~--------~~~-~~~~~~~~~~~~~~~~~~~~ 318 (328)
T cd07856 291 LAPYH--------DPT-DEPVAEEKFDWSFNDADLPV 318 (328)
T ss_pred ccccc--------CCc-cccCchhhcCCchhcccCCH
Confidence 96321 111 12555556666665555443
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-30 Score=280.43 Aligned_cols=225 Identities=22% Similarity=0.338 Sum_probs=184.7
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------ccccccCCeEEEEEe
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------LNRNKTKTHVCLITD 722 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------~~~~~~~~~~~lV~E 722 (975)
+..++|++.+.||.|+||.||+|... |+.||+|.+..... ..........|+|||
T Consensus 3 ~~~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 80 (256)
T cd05039 3 INSKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTE 80 (256)
T ss_pred cChhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEE
Confidence 45778999999999999999999874 78999999876532 111124678899999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
|+++++|.+++.......+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||.+......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~----- 155 (256)
T cd05039 81 YMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG----- 155 (256)
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccc-----
Confidence 999999999998765557999999999999999999999999999999999999999999999999998653210
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFA 881 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~ 881 (975)
.....++..|+|||.+....++.++|||||||++|++++ |..||...+......
T Consensus 156 -------------------------~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~ 210 (256)
T cd05039 156 -------------------------QDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP 210 (256)
T ss_pred -------------------------cccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 001234567999999988889999999999999999997 999998877666655
Q ss_pred HHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 882 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 882 ~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
.+... .........+..+.++|.+||..+|++||| +.+++.
T Consensus 211 ~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~l~~ 251 (256)
T cd05039 211 HVEKG-YRMEAPEGCPPEVYKVMKDCWELDPAKRPT----FKQLRE 251 (256)
T ss_pred HHhcC-CCCCCccCCCHHHHHHHHHHhccChhhCcC----HHHHHH
Confidence 55443 233333457889999999999999999999 777664
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=289.97 Aligned_cols=234 Identities=21% Similarity=0.301 Sum_probs=184.7
Q ss_pred ccccCCCcccccccccCCceEEEEEEEe-------CCCeEEEEEEeccch--------------------------hccc
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELC-------GSGQYFAMKAMDKGV--------------------------MLNR 710 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~-------~t~~~vAiK~l~~~~--------------------------~~~~ 710 (975)
+.+...+|.+.+.||+|+||.||+|++. ..+..||+|.+.... +...
T Consensus 10 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~ 89 (304)
T cd05101 10 WEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGA 89 (304)
T ss_pred ccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEE
Confidence 3466778999999999999999999863 234579999886421 0111
Q ss_pred cccCCeEEEEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 002051 711 NKTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 776 (975)
Q Consensus 711 ~~~~~~~~lV~Ey~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NIL 776 (975)
......+|+||||+++++|.+++.... ...++...+..++.||+.||.|||++||+||||||+|||
T Consensus 90 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nil 169 (304)
T cd05101 90 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVL 169 (304)
T ss_pred EecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEE
Confidence 124567899999999999999997632 134778889999999999999999999999999999999
Q ss_pred EecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHH
Q 002051 777 LQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWA 856 (975)
Q Consensus 777 l~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWS 856 (975)
++.++.+||+|||+++....... ........+++.|+|||++.+..++.++||||
T Consensus 170 i~~~~~~kl~D~g~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s 224 (304)
T cd05101 170 VTENNVMKIADFGLARDVNNIDY-------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 224 (304)
T ss_pred EcCCCcEEECCCccceecccccc-------------------------cccccCCCCCceeeCchhhccCCCCchhhHHH
Confidence 99999999999999865432110 00111234567899999999888999999999
Q ss_pred HHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 857 LGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 857 LG~il~ell~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
|||++|+|++ |..||.+.+..+....+... ........++..+.+||.+||..+|.+||| +.++++
T Consensus 225 lG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~Rps----~~e~l~ 291 (304)
T cd05101 225 FGVLMWEIFTLGGSPYPGIPVEELFKLLKEG-HRMDKPANCTNELYMMMRDCWHAIPSHRPT----FKQLVE 291 (304)
T ss_pred HHHHHHHHHcCCCCCcccCCHHHHHHHHHcC-CcCCCCCCCCHHHHHHHHHHcccChhhCCC----HHHHHH
Confidence 9999999998 88999888777776666443 233334567889999999999999999999 666654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=279.67 Aligned_cols=228 Identities=28% Similarity=0.467 Sum_probs=190.8
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEEEEEec
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCLITDY 723 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~lV~Ey 723 (975)
+|++.+.||+|+||.||++.+..+++.||+|.+..... .....+...+|+||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 58899999999999999999999999999999865432 0111256778999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
+++++|.+++... ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~----- 153 (254)
T cd06627 81 AENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS----- 153 (254)
T ss_pred CCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCc-----
Confidence 9999999999765 569999999999999999999999999999999999999999999999999986543211
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i 883 (975)
.......++..|+|||.+.+..++.++|+||||+++|+|++|..||...........+
T Consensus 154 ----------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~ 211 (254)
T cd06627 154 ----------------------KDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRI 211 (254)
T ss_pred ----------------------ccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHH
Confidence 0112346788999999998888889999999999999999999999877665555555
Q ss_pred HhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 884 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 884 ~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
..... .+....++..+.++|.+||..+|++||| +.+++.||||
T Consensus 212 ~~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~R~~----~~~~l~~~~~ 254 (254)
T cd06627 212 VQDDH-PPLPEGISPELKDFLMQCFQKDPNLRPT----AKQLLKHPWI 254 (254)
T ss_pred hccCC-CCCCCCCCHHHHHHHHHHHhCChhhCcC----HHHHhcCCCC
Confidence 43322 2233457889999999999999999999 9999999998
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=284.75 Aligned_cols=228 Identities=24% Similarity=0.329 Sum_probs=180.1
Q ss_pred cccccccccCCceEEEEEEEeCC---CeEEEEEEeccchhc--------------------------ccc------ccCC
Q 002051 671 FRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVML--------------------------NRN------KTKT 715 (975)
Q Consensus 671 y~i~~~LG~G~fG~Vy~a~~~~t---~~~vAiK~l~~~~~~--------------------------~~~------~~~~ 715 (975)
|++.+.||+|+||.||+|....+ +..||+|.++..... ... ....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 67889999999999999998654 478999988643110 000 0123
Q ss_pred eEEEEEeccCCCCHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCC
Q 002051 716 HVCLITDYCPGGELFLLLDRQ----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 791 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~----~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a 791 (975)
..++||||+++++|..++... ....+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 160 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLS 160 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccce
Confidence 479999999999999988542 2236899999999999999999999999999999999999999999999999998
Q ss_pred CccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCC
Q 002051 792 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTP 870 (975)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~P 870 (975)
+....... ........++..|+|||.+.+..++.++|||||||++|+|++ |.+|
T Consensus 161 ~~~~~~~~-------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p 215 (273)
T cd05035 161 KKIYSGDY-------------------------YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTP 215 (273)
T ss_pred eecccccc-------------------------ccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCC
Confidence 65431110 001112235678999999988889999999999999999998 9999
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 871 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 871 f~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
|.+....+.+..+.... ....+..++..+.++|.+||+.||.+||| +.+++.+
T Consensus 216 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~e~~~~ 268 (273)
T cd05035 216 YPGVENHEIYDYLRHGN-RLKQPEDCLDELYDLMYSCWRADPKDRPT----FTKLREV 268 (273)
T ss_pred CCCCCHHHHHHHHHcCC-CCCCCcCCCHHHHHHHHHHcCCChhhCcC----HHHHHHH
Confidence 98887777766665543 33334567889999999999999999999 7777653
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=290.88 Aligned_cols=235 Identities=22% Similarity=0.303 Sum_probs=184.1
Q ss_pred cccccCCCcccccccccCCceEEEEEEEeC-------CCeEEEEEEeccchh--------------------------cc
Q 002051 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVM--------------------------LN 709 (975)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~-------t~~~vAiK~l~~~~~--------------------------~~ 709 (975)
.+.+..++|.+.++||+|+||.||+|++.. ....+|+|.++.... ..
T Consensus 6 ~~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~ 85 (314)
T cd05099 6 KWEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLG 85 (314)
T ss_pred cccccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEE
Confidence 345566789999999999999999998643 345799998764310 00
Q ss_pred ccccCCeEEEEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 002051 710 RNKTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 775 (975)
Q Consensus 710 ~~~~~~~~~lV~Ey~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NI 775 (975)
.......+|+||||+++|+|.+++.... ...++...+..++.||+.||.|||++||+||||||+||
T Consensus 86 ~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Ni 165 (314)
T cd05099 86 VCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNV 165 (314)
T ss_pred EEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeE
Confidence 1114567899999999999999997632 23588899999999999999999999999999999999
Q ss_pred EEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHH
Q 002051 776 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 855 (975)
Q Consensus 776 Ll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIW 855 (975)
|++.++.+||+|||+++....... ........++..|+|||++.+..++.++|||
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diw 220 (314)
T cd05099 166 LVTEDNVMKIADFGLARGVHDIDY-------------------------YKKTSNGRLPVKWMAPEALFDRVYTHQSDVW 220 (314)
T ss_pred EEcCCCcEEEcccccccccccccc-------------------------ccccccCCCCccccCHHHHccCCcCccchhh
Confidence 999999999999999865431100 0001112345679999999988899999999
Q ss_pred HHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 856 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 856 SLG~il~ell~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
||||++|+|++ |..||.+.+....+..+.... .......++..+.+|+.+||..||++||| +.++++
T Consensus 221 slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~~p~~Rps----~~~ll~ 288 (314)
T cd05099 221 SFGILMWEIFTLGGSPYPGIPVEELFKLLREGH-RMDKPSNCTHELYMLMRECWHAVPTQRPT----FKQLVE 288 (314)
T ss_pred HHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHcCCCcccCcC----HHHHHH
Confidence 99999999998 899998887777666665442 22333456789999999999999999999 666653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=288.61 Aligned_cols=233 Identities=24% Similarity=0.346 Sum_probs=183.9
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc--------------c------------ccc--------
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--------------N------------RNK-------- 712 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~--------------~------------~~~-------- 712 (975)
..++|++.+.||.|+||.||+|.++.+++.||+|.++..... . ...
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 356899999999999999999999999999999998643100 0 000
Q ss_pred --cCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccC
Q 002051 713 --TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 790 (975)
Q Consensus 713 --~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~ 790 (975)
...++|+||||+++ +|..++... ...+++..++.++.||+.||+|||++||+|+||||+||+++.++.+||+|||.
T Consensus 85 ~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~ 162 (302)
T cd07864 85 KKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGL 162 (302)
T ss_pred cccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccc
Confidence 12378999999965 788877654 34689999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCC
Q 002051 791 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYT 869 (975)
Q Consensus 791 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~ 869 (975)
+........ .......++..|+|||.+.+ ..++.++|||||||++|+|++|++
T Consensus 163 ~~~~~~~~~--------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~ 216 (302)
T cd07864 163 ARLYNSEES--------------------------RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKP 216 (302)
T ss_pred cccccCCcc--------------------------cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCC
Confidence 865432110 01112346788999998865 346889999999999999999999
Q ss_pred CCCCCCHHHHHHHHHhcCCC-----C-----------------------CCCCCCcHHHHHHHHHhcccCccccCCChhh
Q 002051 870 PFRGKTRQKTFANILHKDLK-----F-----------------------PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 921 (975)
Q Consensus 870 Pf~~~~~~~~~~~i~~~~~~-----~-----------------------p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~ 921 (975)
||...+....+..+...... + .....++..+.++|.+||+.||.+|||
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~---- 292 (302)
T cd07864 217 IFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCT---- 292 (302)
T ss_pred CCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCC----
Confidence 99887766655554431100 0 011235788999999999999999999
Q ss_pred HHHHHcCCCc
Q 002051 922 ANEIKKHPFF 931 (975)
Q Consensus 922 ~~elL~Hp~f 931 (975)
+.+++.||||
T Consensus 293 ~~~il~~~~~ 302 (302)
T cd07864 293 AEEALNSPWL 302 (302)
T ss_pred HHHHhcCCCC
Confidence 9999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=285.74 Aligned_cols=228 Identities=28% Similarity=0.489 Sum_probs=184.5
Q ss_pred cccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc--------------------------cccccCCeEEEEEecc
Q 002051 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--------------------------NRNKTKTHVCLITDYC 724 (975)
Q Consensus 671 y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~--------------------------~~~~~~~~~~lV~Ey~ 724 (975)
|++.+.||.|++|.||+|.+..+++.+|+|.+...... ........+|+||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 67889999999999999999999999999987643211 1112567889999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCc
Q 002051 725 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 804 (975)
Q Consensus 725 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~ 804 (975)
+ ++|.+++.... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||.+.......
T Consensus 81 ~-~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~------ 152 (283)
T cd05118 81 D-TDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV------ 152 (283)
T ss_pred C-CCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc------
Confidence 5 58988887642 578999999999999999999999999999999999999999999999999885543211
Q ss_pred chhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002051 805 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883 (975)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i 883 (975)
.......++..|+|||.+.+. .++.++|+|||||++|+|++|+.||.+.+..+.+..+
T Consensus 153 ---------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~ 211 (283)
T cd05118 153 ---------------------RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKI 211 (283)
T ss_pred ---------------------ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 011123578899999999876 7889999999999999999999999887776665554
Q ss_pred HhcCC-------------------CCC---------CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 884 LHKDL-------------------KFP---------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 884 ~~~~~-------------------~~p---------~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
..... .++ ....++..+.+||.+||++||.+||+ +.+++.||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~----~~~ll~~~~~ 283 (283)
T cd05118 212 FRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRIT----AEQALAHPYF 283 (283)
T ss_pred HHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcC----HHHHhhCCCC
Confidence 33110 000 01235778999999999999999999 9999999997
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-31 Score=317.05 Aligned_cols=201 Identities=28% Similarity=0.441 Sum_probs=149.4
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCcc
Q 002051 715 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 794 (975)
Q Consensus 715 ~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~ 794 (975)
..+||-||||+...|.+++..+.... ....++.+++||++||.|+|++|||||||||.||+++.++.|||+|||+|+..
T Consensus 669 ~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~ 747 (1351)
T KOG1035|consen 669 LILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDL 747 (1351)
T ss_pred eEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhh
Confidence 46899999998877888887642211 47889999999999999999999999999999999999999999999999762
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC---CCChhHHHHHHHHHHHHHhCCCCC
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG---HTSAVDWWALGILLYEMLYGYTPF 871 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~---~~~k~DIWSLG~il~ell~G~~Pf 871 (975)
....... ....+........+....+..+||..|+|||++.+.. |+.|+||||||++|+||+. ||
T Consensus 748 ~~~~~~~---------d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF 815 (1351)
T KOG1035|consen 748 KENLESI---------DQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PF 815 (1351)
T ss_pred hhhhhhH---------hhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cC
Confidence 2100000 0000000111122233556789999999999997654 9999999999999999986 57
Q ss_pred CCC-CHHHHHHHHHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCcc
Q 002051 872 RGK-TRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932 (975)
Q Consensus 872 ~~~-~~~~~~~~i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~ 932 (975)
... ....++.++-++.++.+.. .+--+.-..+|+.||+.||++||| |.|||++.||-
T Consensus 816 ~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPt----A~eLL~s~llp 875 (1351)
T KOG1035|consen 816 GTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPT----ATELLNSELLP 875 (1351)
T ss_pred CchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCC----HHHHhhccCCC
Confidence 543 3344555555555555511 112234568999999999999999 99999999996
|
|
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=287.75 Aligned_cols=232 Identities=16% Similarity=0.189 Sum_probs=174.0
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCC---CeEEEEEEeccch--hc------------------------ccc-----
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGV--ML------------------------NRN----- 711 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t---~~~vAiK~l~~~~--~~------------------------~~~----- 711 (975)
+..++|++.+.||+|+||.||+|.+..+ +..+|+|+..... +. ...
T Consensus 9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~ 88 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKY 88 (294)
T ss_pred cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcE
Confidence 4457899999999999999999999877 6778888643211 00 000
Q ss_pred ----c----cCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcE
Q 002051 712 ----K----TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHV 783 (975)
Q Consensus 712 ----~----~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~v 783 (975)
. ...+.+++++++ ..++.+++... ...++..++.++.||+.||.|||+++|+||||||+|||++.++.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~ 165 (294)
T PHA02882 89 YGCGSFKRCRMYYRFILLEKL-VENTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRG 165 (294)
T ss_pred EEeeeEecCCceEEEEEEehh-ccCHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcE
Confidence 0 011347888888 55787777653 346788899999999999999999999999999999999999999
Q ss_pred EEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHH
Q 002051 784 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE 863 (975)
Q Consensus 784 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~e 863 (975)
+|+|||+|+.+..+.... ...........||+.|+|||++.+..++.++|||||||++|+
T Consensus 166 ~l~DFGla~~~~~~~~~~--------------------~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~e 225 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHI--------------------EYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLK 225 (294)
T ss_pred EEEEcCCceeeccCCccc--------------------ccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 999999997654221100 000112234579999999999999999999999999999999
Q ss_pred HHhCCCCCCCCCH-HHH--------HHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 864 MLYGYTPFRGKTR-QKT--------FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 864 ll~G~~Pf~~~~~-~~~--------~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
|++|..||.+... ... +.++....... ...+..+.++++.|+..+|++||+ +++|++
T Consensus 226 l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~rp~----~~~l~~ 291 (294)
T PHA02882 226 WAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIKI---KNANKFIYDFIECVTKLSYEEKPD----YDALIK 291 (294)
T ss_pred HHhCCCCCCccccchHHHHHhHHHHHHHhhhhhhcc---CCCCHHHHHHHHHHHhCCCCCCCC----HHHHHH
Confidence 9999999987632 221 22222222222 335788999999999999999999 777764
|
|
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=284.08 Aligned_cols=230 Identities=23% Similarity=0.323 Sum_probs=183.7
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCC---eEEEEEEeccchh-------------------------ccccccCCeEE
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSG---QYFAMKAMDKGVM-------------------------LNRNKTKTHVC 718 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~---~~vAiK~l~~~~~-------------------------~~~~~~~~~~~ 718 (975)
...+|++.+.||.|+||.||+|.++.++ ..+|+|.++.... .......+.+|
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (267)
T cd05066 2 DASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVM 81 (267)
T ss_pred CHHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 3467999999999999999999987554 3799998764310 11112567789
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
+||||+++++|.+++.... ..++...+..++.|++.||.|||++|++||||||+|||++.++.++|+|||++.......
T Consensus 82 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd05066 82 IVTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 160 (267)
T ss_pred EEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccccccccc
Confidence 9999999999999997643 468999999999999999999999999999999999999999999999999986543211
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 877 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~ 877 (975)
.. ........++..|++||.+.+..++.++|+|||||++|++++ |..||......
T Consensus 161 ~~------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~ 216 (267)
T cd05066 161 EA------------------------AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ 216 (267)
T ss_pred ce------------------------eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH
Confidence 00 000111233568999999998889999999999999999886 99999887776
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
+....+... ...+.....+..+.+++.+||+++|.+||+ +.+++
T Consensus 217 ~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~i~ 260 (267)
T cd05066 217 DVIKAIEEG-YRLPAPMDCPAALHQLMLDCWQKDRNERPK----FEQIV 260 (267)
T ss_pred HHHHHHhCC-CcCCCCCCCCHHHHHHHHHHcccCchhCCC----HHHHH
Confidence 666666544 445555567889999999999999999999 66664
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=290.13 Aligned_cols=230 Identities=26% Similarity=0.363 Sum_probs=187.6
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLI 720 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV 720 (975)
...|...+.||.|+||.||++++..+++.||+|.+..... ..........|+|
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 93 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 93 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEE
Confidence 4468889999999999999999999999999998753210 0011145678999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 800 (975)
|||+. |+|.+++... ...+++..+..++.|++.||.|||+++++||||||+|||++.++.++|+|||++.....
T Consensus 94 ~e~~~-~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~---- 167 (308)
T cd06634 94 MEYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP---- 167 (308)
T ss_pred EEccC-CCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecC----
Confidence 99995 6888877543 34589999999999999999999999999999999999999999999999998854321
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhc---CCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
.....|++.|+|||.+. ...++.++|||||||++|+|++|..||...+..
T Consensus 168 ---------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~ 220 (308)
T cd06634 168 ---------------------------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM 220 (308)
T ss_pred ---------------------------cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH
Confidence 12346788999999985 345788999999999999999999999877666
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
.....+.............+..+.+||++||.++|.+||+ +.+++.|||+...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~----~~~ll~~~~~~~~ 273 (308)
T cd06634 221 SALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT----SEVLLKHRFVLRE 273 (308)
T ss_pred HHHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCC----HHHHhhCcccccc
Confidence 6666555544433334457888999999999999999999 9999999999764
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=293.39 Aligned_cols=247 Identities=26% Similarity=0.333 Sum_probs=188.2
Q ss_pred CCccc-ccccccCCceEEEEEEEeCCCeEEEEEEeccchhc--------------------------------------c
Q 002051 669 QHFRP-IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--------------------------------------N 709 (975)
Q Consensus 669 ~~y~i-~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~--------------------------------------~ 709 (975)
++|.. .+.||.|+||+||+|.+..+++.||||++...... .
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 46764 47799999999999999999999999987543211 1
Q ss_pred ccccCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeecc
Q 002051 710 RNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 789 (975)
Q Consensus 710 ~~~~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG 789 (975)
......++|+||||+. ++|.+++... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg 164 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRK--IRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFG 164 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCcc
Confidence 1114567899999995 6999998764 468999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCC
Q 002051 790 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGY 868 (975)
Q Consensus 790 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~ 868 (975)
++.....+......... . ............+++.|+|||.+.+. .++.++|+|||||++|+|++|.
T Consensus 165 ~~~~~~~~~~~~~~~~~------------~-~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~ 231 (335)
T PTZ00024 165 LARRYGYPPYSDTLSKD------------E-TMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGK 231 (335)
T ss_pred ceeeccccccccccccc------------c-cccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 98765422111000000 0 00001112234578899999998764 4688999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHhcCCC-----CC---------------------CCCCCcHHHHHHHHHhcccCccccCCChhhH
Q 002051 869 TPFRGKTRQKTFANILHKDLK-----FP---------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGA 922 (975)
Q Consensus 869 ~Pf~~~~~~~~~~~i~~~~~~-----~p---------------------~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~ 922 (975)
+||.+.+..+.+..+...... ++ .....+..+.+||.+||+++|++||| +
T Consensus 232 ~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s----~ 307 (335)
T PTZ00024 232 PLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERIS----A 307 (335)
T ss_pred CCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccC----H
Confidence 999988877766655431100 00 01234678999999999999999999 9
Q ss_pred HHHHcCCCccCCC
Q 002051 923 NEIKKHPFFKGVN 935 (975)
Q Consensus 923 ~elL~Hp~f~~~~ 935 (975)
+++|.||||++..
T Consensus 308 ~~~l~~~~~~~~~ 320 (335)
T PTZ00024 308 KEALKHEYFKSDP 320 (335)
T ss_pred HHHhcCcccCCCC
Confidence 9999999998653
|
|
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=284.29 Aligned_cols=233 Identities=21% Similarity=0.328 Sum_probs=189.1
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCC-----CeEEEEEEeccch-------------------------hccccccCC
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGV-------------------------MLNRNKTKT 715 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t-----~~~vAiK~l~~~~-------------------------~~~~~~~~~ 715 (975)
+..++|++++.||.|+||.||+|+.+.+ .+.||+|.+.... +.....+..
T Consensus 2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 81 (275)
T cd05046 2 FPRSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE 81 (275)
T ss_pred CChHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC
Confidence 3456899999999999999999997643 4689999875421 111122556
Q ss_pred eEEEEEeccCCCCHHHHHhhCCC-------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeec
Q 002051 716 HVCLITDYCPGGELFLLLDRQPT-------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 788 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~-------~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DF 788 (975)
..|+||||+++++|.+++..... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.++++||
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEccc
Confidence 78999999999999999976431 15899999999999999999999999999999999999999999999999
Q ss_pred cCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-C
Q 002051 789 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-G 867 (975)
Q Consensus 789 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G 867 (975)
|++...... .........++..|+|||.+.+..++.++|||||||++|+|++ |
T Consensus 162 ~~~~~~~~~--------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~ 215 (275)
T cd05046 162 SLSKDVYNS--------------------------EYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQG 215 (275)
T ss_pred ccccccCcc--------------------------cccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCC
Confidence 987532210 0011123356778999999988888999999999999999998 8
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 868 YTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 868 ~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
..||........+..+..+...++....++..+.++|.+||+.+|.+||| +.+++.+
T Consensus 216 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~----~~~~l~~ 272 (275)
T cd05046 216 ELPFYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPS----FSELVSA 272 (275)
T ss_pred CCCccccchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCC----HHHHHHH
Confidence 89998877777777776666666666668899999999999999999999 8888753
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-30 Score=281.29 Aligned_cols=229 Identities=22% Similarity=0.353 Sum_probs=184.1
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------c------------cccccCCeEEEEE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------L------------NRNKTKTHVCLIT 721 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------~------------~~~~~~~~~~lV~ 721 (975)
.+..++|++.++||+|+||.||++.+. .+..+|+|.+..... + ... .....|+||
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-~~~~~~~v~ 79 (260)
T cd05073 2 EIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV-TKEPIYIIT 79 (260)
T ss_pred cccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEE-cCCCeEEEE
Confidence 466789999999999999999999864 456799998764321 0 000 235689999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
||+++++|.+++.+.....++...+..++.||+.||.|||+.|++|+||||+||+++.++.+||+|||.+........
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 157 (260)
T cd05073 80 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-- 157 (260)
T ss_pred EeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCc--
Confidence 999999999999876556788899999999999999999999999999999999999999999999998855321100
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTF 880 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~ 880 (975)
.......++..|+|||++.+..++.++|+|||||++|++++ |..||.+.+.....
T Consensus 158 ------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~ 213 (260)
T cd05073 158 ------------------------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 213 (260)
T ss_pred ------------------------ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 01112245677999999998889999999999999999998 99999887776666
Q ss_pred HHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 881 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 881 ~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
..+.. ....+.....+..+.+++.+||+.+|++||+ +.+++
T Consensus 214 ~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~l~ 254 (260)
T cd05073 214 RALER-GYRMPRPENCPEELYNIMMRCWKNRPEERPT----FEYIQ 254 (260)
T ss_pred HHHhC-CCCCCCcccCCHHHHHHHHHHcccCcccCcC----HHHHH
Confidence 55543 3344444567889999999999999999999 66654
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-30 Score=281.56 Aligned_cols=231 Identities=23% Similarity=0.319 Sum_probs=183.8
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCe---EEEEEEeccch-------------------------hccccccCCeEE
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGV-------------------------MLNRNKTKTHVC 718 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~---~vAiK~l~~~~-------------------------~~~~~~~~~~~~ 718 (975)
..++|+..+.||+|+||.||+|.++.++. .+|+|.+.... +........+.|
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (268)
T cd05063 3 HPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAM 82 (268)
T ss_pred ChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcE
Confidence 34578999999999999999999976654 79999876431 011112556789
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
+||||+++++|.+++... ...+++..+..++.|++.||+|||++|++|+||||+||+++.++.+||+|||++.......
T Consensus 83 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 161 (268)
T cd05063 83 IITEYMENGALDKYLRDH-DGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDP 161 (268)
T ss_pred EEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccccc
Confidence 999999999999999764 3568999999999999999999999999999999999999999999999999986543111
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 877 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~ 877 (975)
.. .........++.|+|||++.+..++.++|||||||++|+|++ |..||...+..
T Consensus 162 ~~------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~ 217 (268)
T cd05063 162 EG------------------------TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH 217 (268)
T ss_pred cc------------------------ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH
Confidence 00 000111223567999999998889999999999999999997 99999887777
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
+....+... ...|.....+..+.+++.+||+.+|++||+ +.++++
T Consensus 218 ~~~~~i~~~-~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~----~~~i~~ 262 (268)
T cd05063 218 EVMKAINDG-FRLPAPMDCPSAVYQLMLQCWQQDRARRPR----FVDIVN 262 (268)
T ss_pred HHHHHHhcC-CCCCCCCCCCHHHHHHHHHHcCCCcccCcC----HHHHHH
Confidence 766666543 345555567889999999999999999999 666653
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >PRK13560 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-30 Score=324.82 Aligned_cols=415 Identities=12% Similarity=0.099 Sum_probs=304.9
Q ss_pred ccceeccccccccccccCcchHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCC
Q 002051 167 SVRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTD 246 (975)
Q Consensus 167 ~~~~~~di~~~~~~e~~L~~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~ 246 (975)
..+...|||++|+++++|+++.+.|+.++++++++++++|. +|+|+++|++|++++||+.+|++|+++..+.++...
T Consensus 182 ~~g~~~DIT~rk~ae~~l~~~~~~l~~l~e~~~~~i~~~d~---~g~i~~~N~~~~~~~G~~~~e~~g~~~~~~~~~~~~ 258 (807)
T PRK13560 182 VDGFAEDITERKRAEERIDEALHFLQQLLDNIADPAFWKDE---DAKVFGCNDAACLACGFRREEIIGMSIHDFAPAQPA 258 (807)
T ss_pred EEEEEEccchHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC---CCCEEEEhHHHHHHhCCCHHHHcCCcchhcCCcchh
Confidence 45667999999999999999999999999999999999999 999999999999999999999999999888877665
Q ss_pred HHHHHHHHHHHHcCCcEEEEEEEEecCCCEEEEEEEe--eeeecCCCCEEEEEEEEeccchhhHHHHhhhcCCCCCchhh
Q 002051 247 PEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTI--APIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESL 324 (975)
Q Consensus 247 ~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~w~~~~i--~pi~d~~G~v~~~v~~~rDITerk~~e~~l~~~~~~l~~r~ 324 (975)
.......+..+..++....+...+++||+.+|+++.+ .|+.+..|.+.+++++++|||++|++|++|+.++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~~~~~g~~~g~~~~~~DITerk~~e~~L~~se------- 331 (807)
T PRK13560 259 DDYQEADAAKFDADGSQIIEAEFQNKDGRTRPVDVIFNHAEFDDKENHCAGLVGAITDISGRRAAERELLEKE------- 331 (807)
T ss_pred HHHHHHHHHHhccCCceEEEEEEEcCCCCEEEEEEEecceEEEcCCCCEEEEEEEEEechHHHHHHHHHHHHH-------
Confidence 5554555666667777778888899999999776654 5567899999999999999999999999876421
Q ss_pred hhHHHHHHHHHHhhHHHHHHHhcCcc-ccccCCCCCcc-cccCCCchhhhhhccccCCCCCCCCCCCCCCC--------C
Q 002051 325 IRYDARQKEMATSSVTELVQAMKKPR-SLSESTNRPPI-IRKSEGGVEEERAGALGRRKSENVPPPRRNSY--------G 394 (975)
Q Consensus 325 ~~~d~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~ 394 (975)
+.+..++.....+. .++..+...++ +......+|+...+++|+......+....... .
T Consensus 332 ------------~~l~~l~~~~~~~i~~~d~~g~i~~~nn~~~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~ 399 (807)
T PRK13560 332 ------------DMLRAIIEAAPIAAIGLDADGNICFVNNNAAERMLGWSAAEVMGKPLPGMDPELNEEFWCGDFQEWYP 399 (807)
T ss_pred ------------HHHHHHHHhCcccEEEEcCCCCEEEecCHHHHHHhCCCHHHHcCCCccccChhhhhhhhhchhhhcCC
Confidence 11223333333222 23333333333 44555678888888888876554432110000 0
Q ss_pred CCc------------ccccccccccccccccccCcccccccccccccCCCCCCcccchhhhcCCCCCCCCCCCCCchhhH
Q 002051 395 GGC------------RTSMQRISEVPEKKKQKSGRRSFMGLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDK 462 (975)
Q Consensus 395 ~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~er~ 462 (975)
.+. ...+..+........+++|...+..+...++....+ ...+..+..+|||+||
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~~~~~~~p~~d~~g-------------~~~~~~~~~~DITerk 466 (807)
T PRK13560 400 DGRPMAFDACPMAKTIKGGKIFDGQEVLIEREDDGPADCSAYAEPLHDADG-------------NIIGAIALLVDITERK 466 (807)
T ss_pred cCCcchhhhhhHHHHHhcCCcccCceEEEEcCCCCeEEEEEEEeeeECCCC-------------CEEEEEEEeehhhhHH
Confidence 000 001111111222333445555555555544433332 2333344568999999
Q ss_pred HHHHHHhhcCcHHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCC--CCCcCCCCCCHHHHHHHHHHH
Q 002051 463 VRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAAI 540 (975)
Q Consensus 463 ~~~~~l~~~~~l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~--~~~l~~~~~~~~~~~~~~~~l 540 (975)
+.+++|++ .+.++++++++++.++.. .+..+.+|.....++||+++|+++.. +..+.+|++.......+...+
T Consensus 467 ~~E~~L~~---~~~~~e~~~~~i~~~~~~--~~~~~~~~~~~~~~~G~~~~e~~~~~~~~~~~~~p~d~~~~~~~~~~~~ 541 (807)
T PRK13560 467 QVEEQLLL---ANLIVENSPLVLFRWKAE--EGWPVELVSKNITQFGYEPDEFISGKRMFAAIIHPADLEQVAAEVAEFA 541 (807)
T ss_pred HHHHHHHH---HHHHHhcCCceEEEEecC--CCceEEEecchhhhcCCCHHHhhcccchHhhhcChhhHHHHHHHHHHHH
Confidence 99999987 678999999999988865 33355666667788999999998733 556788888888777777777
Q ss_pred HcCC-cEEEEEEEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccccccCCCcchhhHHHHHHHHHHhhhhhhh
Q 002051 541 DNQT-DVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEA 619 (975)
Q Consensus 541 ~~g~-~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~e~~~~~~~~~~e~~~~v~~~~~~i~~~ 619 (975)
..+. .+..+++..++||..+|+..+..|++|.+|.+.+++++++|||+||++|+++ +++.++...++..++|.++++
T Consensus 542 ~~g~~~~~~e~r~~~~dG~~~w~~~~~~~~~d~~G~~~~~~g~~~DITerK~aE~~L--~~a~~~~~~~l~~isHelrnp 619 (807)
T PRK13560 542 AQGVDRFEQEYRILGKGGAVCWIDDQSAAERDEEGQISHFEGIVIDISERKHAEEKI--KAALTEKEVLLKEIHHRVKNN 619 (807)
T ss_pred hcCCccceeEEEEEcCCCCEEEEEecceeeeCCCCCEEEEEEEEechHHHHHHHHHH--HHHHHHHHHHHHHhHHHHhCh
Confidence 6654 4778999999999999999999999999999999999999999999966543 344566778888899999888
Q ss_pred hhcC
Q 002051 620 VKEL 623 (975)
Q Consensus 620 v~~l 623 (975)
+..+
T Consensus 620 L~~I 623 (807)
T PRK13560 620 LQII 623 (807)
T ss_pred HHHH
Confidence 7643
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.3e-32 Score=288.84 Aligned_cols=240 Identities=27% Similarity=0.447 Sum_probs=196.1
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-------------------------------hcccc-ccCC
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------------------------MLNRN-KTKT 715 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------------------------~~~~~-~~~~ 715 (975)
-++|-++..||+|+|+.||+|.+..-.++||+|+..... +++.+ .+.+
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 468999999999999999999999999999999864321 01111 1567
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC--CCeecCCCCCCEEEec---CCcEEEeeccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--GIIYRDLKPENVLLQG---NGHVSLTDFDL 790 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~--gIiHrDIKp~NILl~~---~g~vkL~DFG~ 790 (975)
.+|-|+|||+|.+|.-||+.+ ..+++.+++.|+.||+.||.||.+. -|||-||||.|||+.. -|.+||+|||+
T Consensus 542 sFCTVLEYceGNDLDFYLKQh--klmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGL 619 (775)
T KOG1151|consen 542 SFCTVLEYCEGNDLDFYLKQH--KLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGL 619 (775)
T ss_pred cceeeeeecCCCchhHHHHhh--hhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecch
Confidence 789999999999999999875 6799999999999999999999987 5999999999999964 46799999999
Q ss_pred CCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC----CCCChhHHHHHHHHHHHHHh
Q 002051 791 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA----GHTSAVDWWALGILLYEMLY 866 (975)
Q Consensus 791 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~----~~~~k~DIWSLG~il~ell~ 866 (975)
++.++...... ...+.......||.+|++||++.-. ..+.++||||+|+|+|.+++
T Consensus 620 SKIMdddSy~~--------------------vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClY 679 (775)
T KOG1151|consen 620 SKIMDDDSYNS--------------------VDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLY 679 (775)
T ss_pred hhhccCCccCc--------------------ccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhc
Confidence 98876432211 1223445567899999999998533 46779999999999999999
Q ss_pred CCCCCCCCCH-HHHHHH--HH-hcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 867 GYTPFRGKTR-QKTFAN--IL-HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 867 G~~Pf~~~~~-~~~~~~--i~-~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
|+.||...-. .++++. |+ .....||.-+.++.++++||++||.+.-+.|+. +.+|-.||||..
T Consensus 680 GrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~D----V~qLA~dpyllP 746 (775)
T KOG1151|consen 680 GRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRID----VQQLACDPYLLP 746 (775)
T ss_pred cCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhh----HHHHccCccccc
Confidence 9999976433 333332 22 245678888889999999999999999999999 999999999975
|
|
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-30 Score=287.47 Aligned_cols=232 Identities=25% Similarity=0.360 Sum_probs=179.1
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCC--------------CeEEEEEEeccch-------------------------
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGS--------------GQYFAMKAMDKGV------------------------- 706 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t--------------~~~vAiK~l~~~~------------------------- 706 (975)
+..++|++.++||+|+||.||+|.+..+ ...||+|.++...
T Consensus 2 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~ 81 (295)
T cd05097 2 FPRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIR 81 (295)
T ss_pred CchHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCe
Confidence 3456899999999999999999987543 2359999886531
Q ss_pred hccccccCCeEEEEEeccCCCCHHHHHhhCC----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 002051 707 MLNRNKTKTHVCLITDYCPGGELFLLLDRQP----------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 776 (975)
Q Consensus 707 ~~~~~~~~~~~~lV~Ey~~ggsL~~~l~~~~----------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NIL 776 (975)
+.........+|+|||||.+++|.+++.... ...++...+..++.||+.||+|||++|++|+||||+|||
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil 161 (295)
T cd05097 82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCL 161 (295)
T ss_pred EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEE
Confidence 0111125677899999999999999986532 124688889999999999999999999999999999999
Q ss_pred EecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHH
Q 002051 777 LQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWA 856 (975)
Q Consensus 777 l~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWS 856 (975)
++.++.+||+|||++....... .........++..|+|||++.+..++.++||||
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwS 216 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGD-------------------------YYRIQGRAVLPIRWMAWESILLGKFTTASDVWA 216 (295)
T ss_pred EcCCCcEEecccccccccccCc-------------------------ceeccCcCcCceeecChhhhccCCcCchhhHHH
Confidence 9999999999999985432110 001112335578899999999888999999999
Q ss_pred HHHHHHHHHh--CCCCCCCCCHHHHHHHHHh------cCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 857 LGILLYEMLY--GYTPFRGKTRQKTFANILH------KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 857 LG~il~ell~--G~~Pf~~~~~~~~~~~i~~------~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
|||++|+|++ |..||...+....+..+.. ...........+..+.+|+.+||+.||++||| +++|+
T Consensus 217 lG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs----~~~i~ 290 (295)
T cd05097 217 FGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPT----FNKIH 290 (295)
T ss_pred HHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcC----HHHHH
Confidence 9999999987 7789987776665554432 11112223346789999999999999999999 66664
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-30 Score=284.74 Aligned_cols=229 Identities=27% Similarity=0.450 Sum_probs=183.0
Q ss_pred cccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------h------------------ccccccC--CeEEEEEe
Q 002051 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------M------------------LNRNKTK--THVCLITD 722 (975)
Q Consensus 671 y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------~------------------~~~~~~~--~~~~lV~E 722 (975)
|++.+.||.|+||.||+|.+..+++.+|+|.+.... + ....... ...|+|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 678899999999999999999999999999987642 0 0011133 78999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
|++ ++|.+++... ...+++..++.++.||+.||.|||++|++|+||||+|||++.++.++|+|||++........
T Consensus 81 ~~~-~~l~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~--- 155 (287)
T cd07840 81 YMD-HDLTGLLDSP-EVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS--- 155 (287)
T ss_pred ccc-ccHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc---
Confidence 996 5899888754 24689999999999999999999999999999999999999999999999999865432110
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~ 881 (975)
.......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||...+....+.
T Consensus 156 -----------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~ 212 (287)
T cd07840 156 -----------------------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLE 212 (287)
T ss_pred -----------------------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 01122356788999998765 457889999999999999999999998877766655
Q ss_pred HHHhcCCC-----CCC-----------------------CCC-CcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 882 NILHKDLK-----FPS-----------------------STP-TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 882 ~i~~~~~~-----~p~-----------------------~~~-~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
.+...... ++. ... ++..+.++|++||+.+|.+||+ +.+++.||||
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~----~~~~l~~~~~ 287 (287)
T cd07840 213 KIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRIS----ADQALQHEYF 287 (287)
T ss_pred HHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcC----HHHHhhCcCC
Confidence 55431100 000 011 2778999999999999999999 9999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-30 Score=284.77 Aligned_cols=231 Identities=22% Similarity=0.314 Sum_probs=183.2
Q ss_pred ccCCCcccccccccCCceEEEEEEEeC-----CCeEEEEEEeccchh-------------------------ccccccCC
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVM-------------------------LNRNKTKT 715 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~-----t~~~vAiK~l~~~~~-------------------------~~~~~~~~ 715 (975)
+..++|++++.||.|+||.||+|.+.. ++..||+|++..... ........
T Consensus 2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~ 81 (288)
T cd05050 2 YPRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGK 81 (288)
T ss_pred CChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC
Confidence 345789999999999999999999753 678999998864310 01112456
Q ss_pred eEEEEEeccCCCCHHHHHhhCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 002051 716 HVCLITDYCPGGELFLLLDRQP--------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 775 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~--------------------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NI 775 (975)
++|+||||+++++|.+++.... ...+++..+..++.||+.||.|||++|++||||||+||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~ni 161 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNC 161 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhhe
Confidence 7899999999999999997431 12478888999999999999999999999999999999
Q ss_pred EEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHH
Q 002051 776 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 855 (975)
Q Consensus 776 Ll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIW 855 (975)
|++.++.++|+|||++........ ........++..|+|||.+.+..++.++|||
T Consensus 162 l~~~~~~~~l~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~ 216 (288)
T cd05050 162 LVGENMVVKIADFGLSRNIYSADY-------------------------YKASENDAIPIRWMPPESIFYNRYTTESDVW 216 (288)
T ss_pred EecCCCceEECccccceecccCcc-------------------------ccccCCCccChhhcCHHHHhcCCCCchhHHH
Confidence 999999999999998854321100 0011122346679999999988899999999
Q ss_pred HHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 856 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 856 SLG~il~ell~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
||||++|+|++ |..||.+.+..+....+..+.. ++.....+..+.+||.+||+.||.+||| +.||+
T Consensus 217 slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~el~ 283 (288)
T cd05050 217 AYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNV-LSCPDNCPLELYNLMRLCWSKLPSDRPS----FASIN 283 (288)
T ss_pred HHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC-CCCCCCCCHHHHHHHHHHcccCcccCCC----HHHHH
Confidence 99999999997 8899988887777776665443 2333457889999999999999999999 66654
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-30 Score=291.94 Aligned_cols=236 Identities=22% Similarity=0.309 Sum_probs=184.6
Q ss_pred cccccCCCcccccccccCCceEEEEEEEeCC-------CeEEEEEEeccch-------------hc-------------c
Q 002051 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGS-------GQYFAMKAMDKGV-------------ML-------------N 709 (975)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t-------~~~vAiK~l~~~~-------------~~-------------~ 709 (975)
.+.+...+|++++.||+|+||.||+|.+... +..||+|.++... +. .
T Consensus 6 ~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~ 85 (334)
T cd05100 6 KWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLG 85 (334)
T ss_pred ccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeE
Confidence 4556777899999999999999999987542 2368999876421 00 1
Q ss_pred ccccCCeEEEEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 002051 710 RNKTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 775 (975)
Q Consensus 710 ~~~~~~~~~lV~Ey~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NI 775 (975)
.......+|+||||+++|+|.+++.... ...++...+..++.||+.||.|||++||+||||||+||
T Consensus 86 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni 165 (334)
T cd05100 86 ACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNV 165 (334)
T ss_pred EEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceE
Confidence 1124567899999999999999997532 22477788899999999999999999999999999999
Q ss_pred EEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHH
Q 002051 776 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 855 (975)
Q Consensus 776 Ll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIW 855 (975)
|++.++.+||+|||+++....... ........++..|+|||++.+..++.++|||
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 220 (334)
T cd05100 166 LVTEDNVMKIADFGLARDVHNIDY-------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 220 (334)
T ss_pred EEcCCCcEEECCcccceecccccc-------------------------cccccCCCcCceEcCHHHhccCCcCchhhhH
Confidence 999999999999999865431100 0011122345679999999999999999999
Q ss_pred HHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 856 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 856 SLG~il~ell~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
||||++|+|++ |..||.+.+..+....+... ...+.....+..+.+||.+||+.+|.+||| +.+++.+
T Consensus 221 slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~Rps----~~ell~~ 289 (334)
T cd05100 221 SFGVLLWEIFTLGGSPYPGIPVEELFKLLKEG-HRMDKPANCTHELYMIMRECWHAVPSQRPT----FKQLVED 289 (334)
T ss_pred HHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcccChhhCcC----HHHHHHH
Confidence 99999999998 89999988777766666543 333344457889999999999999999999 6666654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=292.90 Aligned_cols=239 Identities=28% Similarity=0.430 Sum_probs=186.4
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------hc----cc-----------cccCCeEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------ML----NR-----------NKTKTHVC 718 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------~~----~~-----------~~~~~~~~ 718 (975)
.++|++.+.||+|+||.||+|.+..+++.+|+|.+.+.. ++ .. ..+...+|
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 468999999999999999999999999999999874320 00 00 01234689
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
+||||+. ++|..++... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 86 lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~ 161 (337)
T cd07852 86 LVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELE 161 (337)
T ss_pred EEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccccc
Confidence 9999995 6999988753 68889999999999999999999999999999999999999999999999986543211
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
.. ..........|++.|+|||.+.+ ..++.++|||||||++|+|++|++||.+....
T Consensus 162 ~~----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~ 219 (337)
T cd07852 162 EN----------------------PENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTL 219 (337)
T ss_pred cc----------------------ccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChH
Confidence 00 00011223568999999998765 45788999999999999999999999877665
Q ss_pred HHHHHHHhcCCC----------------------------C-CCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 878 KTFANILHKDLK----------------------------F-PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 878 ~~~~~i~~~~~~----------------------------~-p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
.....+...... + .....++..+.+||.+||+.||++||| +.+++.|
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps----~~~il~~ 295 (337)
T cd07852 220 NQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLT----AEEALEH 295 (337)
T ss_pred HHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccC----HHHHhhC
Confidence 544443221100 0 001235788999999999999999999 9999999
Q ss_pred CCccCCCc
Q 002051 929 PFFKGVNW 936 (975)
Q Consensus 929 p~f~~~~~ 936 (975)
|||+.++-
T Consensus 296 ~~~~~~~~ 303 (337)
T cd07852 296 PYVAQFHN 303 (337)
T ss_pred hhhhhhcc
Confidence 99987633
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-30 Score=279.24 Aligned_cols=221 Identities=22% Similarity=0.327 Sum_probs=176.1
Q ss_pred cccccCCceEEEEEEEeCCC---eEEEEEEeccchhcc-------------c-----------cccCCeEEEEEeccCCC
Q 002051 675 KPLGSGDTGSVHLVELCGSG---QYFAMKAMDKGVMLN-------------R-----------NKTKTHVCLITDYCPGG 727 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~---~~vAiK~l~~~~~~~-------------~-----------~~~~~~~~lV~Ey~~gg 727 (975)
++||+|+||.||+|....++ ..||+|.+....... . ......+++||||++++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~ 80 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLG 80 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCCC
Confidence 47999999999999876655 789999987543210 0 01345679999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchh
Q 002051 728 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 807 (975)
Q Consensus 728 sL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 807 (975)
+|.+++... ..+++..+..++.|++.||.|||.++++|+||||+|||++.++.+||+|||+++........
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~------- 151 (257)
T cd05060 81 PLLKYLKKR--REIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY------- 151 (257)
T ss_pred cHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcc-------
Confidence 999999875 36899999999999999999999999999999999999999999999999998654311100
Q ss_pred hhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhc
Q 002051 808 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHK 886 (975)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~~i~~~ 886 (975)
........++..|+|||.+.+..++.++|||||||++|+|++ |.+||...+.......+...
T Consensus 152 -----------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~ 214 (257)
T cd05060 152 -----------------YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESG 214 (257)
T ss_pred -----------------cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC
Confidence 000111224567999999998889999999999999999997 99999887776665555443
Q ss_pred CCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 887 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 887 ~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
...+....++..+.++|.+||..+|++||+ +.+|+
T Consensus 215 -~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~----~~~l~ 249 (257)
T cd05060 215 -ERLPRPEECPQEIYSIMLSCWKYRPEDRPT----FSELE 249 (257)
T ss_pred -CcCCCCCCCCHHHHHHHHHHhcCChhhCcC----HHHHH
Confidence 334445567889999999999999999999 66664
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-30 Score=281.73 Aligned_cols=228 Identities=29% Similarity=0.490 Sum_probs=184.4
Q ss_pred cccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEEEEEecc
Q 002051 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCLITDYC 724 (975)
Q Consensus 671 y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~lV~Ey~ 724 (975)
|++.+.||.|+||.||+|++..+++.||+|++..... ........++|+||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 6778899999999999999999999999998876420 01112567899999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCc
Q 002051 725 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 804 (975)
Q Consensus 725 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~ 804 (975)
+ ++|.+++.... ..+++..++.++.|++.||.|||++||+||||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~------ 152 (282)
T cd07829 81 D-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPL------ 152 (282)
T ss_pred C-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCc------
Confidence 6 69999998742 469999999999999999999999999999999999999999999999999986543110
Q ss_pred chhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002051 805 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883 (975)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i 883 (975)
.......++..|+|||.+.+. .++.++|+|||||++|+|++|.+||.+.+....+.++
T Consensus 153 ---------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~ 211 (282)
T cd07829 153 ---------------------RTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKI 211 (282)
T ss_pred ---------------------cccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHH
Confidence 011223457789999999776 7889999999999999999999999887766665554
Q ss_pred Hhc------------------CCCCCC---------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 884 LHK------------------DLKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 884 ~~~------------------~~~~p~---------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
... ...++. ....+..+.++|++||..||.+||+ +.+++.||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~----~~~~l~~p~~ 282 (282)
T cd07829 212 FQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRIS----AKEALKHPYF 282 (282)
T ss_pred HHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCC----HHHHhhCcCC
Confidence 321 001111 1124678999999999999999999 9999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-32 Score=275.55 Aligned_cols=235 Identities=25% Similarity=0.369 Sum_probs=187.8
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEEE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCL 719 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~l 719 (975)
+...+.+-+..||.|+||+|++..|+.+|+..|||.++.... +......+..+|
T Consensus 61 F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWi 140 (361)
T KOG1006|consen 61 FTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWI 140 (361)
T ss_pred cccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceee
Confidence 455667788899999999999999999999999999875432 111115677889
Q ss_pred EEeccCCCCHHHHHhh---CCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 720 ITDYCPGGELFLLLDR---QPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~---~~~~~l~~~~i~~i~~qIl~aL~yLH~~-gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
.||+| .-+|..+.+. .....++|..+-.|....+.||.||-.. +||||||||+|||++..|.+||||||++-.+.
T Consensus 141 CMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv 219 (361)
T KOG1006|consen 141 CMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLV 219 (361)
T ss_pred eHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHH
Confidence 99999 5566443321 2235699999999999999999999965 99999999999999999999999999985432
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhc--CCCCCChhHHHHHHHHHHHHHhCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA--GAGHTSAVDWWALGILLYEMLYGYTPFRG 873 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~--~~~~~~k~DIWSLG~il~ell~G~~Pf~~ 873 (975)
.+ -..+.-.|...|||||.+. +..|+.++|+||||++|||+.+|..||.+
T Consensus 220 ~S----------------------------iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~ 271 (361)
T KOG1006|consen 220 DS----------------------------IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRK 271 (361)
T ss_pred HH----------------------------HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcch
Confidence 11 0112336889999999984 34588899999999999999999999987
Q ss_pred CC-HHHHHHHHHhcCCCCCCC----CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 874 KT-RQKTFANILHKDLKFPSS----TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 874 ~~-~~~~~~~i~~~~~~~p~~----~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
.+ ..+++..++.+..+.... ...+..+..||..||.+|-..||+ ..+|+++||++-
T Consensus 272 w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpk----y~~Lk~~~fyr~ 332 (361)
T KOG1006|consen 272 WDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPK----YDDLKKFPFYRM 332 (361)
T ss_pred HHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcc----hhhhhcCchhhh
Confidence 54 355666677776543322 347889999999999999999999 999999999974
|
|
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-30 Score=280.80 Aligned_cols=232 Identities=23% Similarity=0.318 Sum_probs=184.3
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCe---EEEEEEeccch-------------------------hccccccCCeEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGV-------------------------MLNRNKTKTHVCL 719 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~---~vAiK~l~~~~-------------------------~~~~~~~~~~~~l 719 (975)
..+|++.+.||+|+||.||+|.++.+++ .||||.+.... +.........+|+
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 82 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMI 82 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEE
Confidence 4579999999999999999999987664 69999986531 0111125667899
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
||||+++++|.+++... .+.++...++.++.|++.||.|||++|++|+||||+||+++.++.+||+|||++........
T Consensus 83 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~ 161 (269)
T cd05065 83 ITEFMENGALDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 161 (269)
T ss_pred EEecCCCCcHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCcc
Confidence 99999999999998764 34689999999999999999999999999999999999999999999999999865432110
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK 878 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~ 878 (975)
.. ..........+..|+|||.+.+..++.++|||||||++|++++ |..||...+..+
T Consensus 162 ~~----------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~ 219 (269)
T cd05065 162 DP----------------------TYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD 219 (269)
T ss_pred cc----------------------ccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH
Confidence 00 0000011112457999999998889999999999999999886 999998877777
Q ss_pred HHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 879 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 879 ~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
....+. .....+....++..+.+++.+||..+|++||+ +.+|+.
T Consensus 220 ~~~~i~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~i~~ 263 (269)
T cd05065 220 VINAIE-QDYRLPPPMDCPTALHQLMLDCWQKDRNARPK----FGQIVS 263 (269)
T ss_pred HHHHHH-cCCcCCCcccCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 666664 33455555567889999999999999999999 777764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-30 Score=285.07 Aligned_cols=231 Identities=22% Similarity=0.348 Sum_probs=177.0
Q ss_pred CCcccccccccCCceEEEEEEE----eCCCeEEEEEEeccchh-------------c------------cccc--cCCeE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVM-------------L------------NRNK--TKTHV 717 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~----~~t~~~vAiK~l~~~~~-------------~------------~~~~--~~~~~ 717 (975)
.-|++++.||+|+||.||+|+. +.++..||+|.++.... + .... ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 4589999999999999999984 45788999999863310 0 0001 13678
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|+||||++|++|.+++... ...++...+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++......
T Consensus 84 ~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~ 162 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRN-KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 162 (284)
T ss_pred EEEEEccCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccC
Confidence 9999999999999999764 235899999999999999999999999999999999999999999999999998654321
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC--
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT-- 875 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~-- 875 (975)
... ........++..|+|||++.+..++.++|||||||++|+|+++..|+....
T Consensus 163 ~~~------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~ 218 (284)
T cd05079 163 KEY------------------------YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTL 218 (284)
T ss_pred ccc------------------------eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccch
Confidence 100 011123457788999999988889999999999999999999876653211
Q ss_pred ------------HHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 876 ------------RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 876 ------------~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
...............+....++..+.+||.+||+.||++||| +++++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~il~~ 279 (284)
T cd05079 219 FLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTT----FQNLIEG 279 (284)
T ss_pred hhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcC----HHHHHHH
Confidence 111111222233334445567899999999999999999999 8887653
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-30 Score=283.71 Aligned_cols=228 Identities=24% Similarity=0.371 Sum_probs=173.8
Q ss_pred CCc-ccccccccCCceEEEEEEE----eCCCeEEEEEEeccchh-------------c------------cc--cccCCe
Q 002051 669 QHF-RPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVM-------------L------------NR--NKTKTH 716 (975)
Q Consensus 669 ~~y-~i~~~LG~G~fG~Vy~a~~----~~t~~~vAiK~l~~~~~-------------~------------~~--~~~~~~ 716 (975)
++| ++++.||+|+||+||++.. ..++..||+|.+..... + .. ......
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKG 82 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCce
Confidence 345 9999999999999988753 35688999999864311 0 00 012456
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
+|+||||+++++|.+++.. ..+++..++.++.|++.||.|||++||+||||||+|||++.++.++|+|||++.....
T Consensus 83 ~~lv~e~~~~~~l~~~~~~---~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 159 (283)
T cd05080 83 LQLIMEYVPLGSLRDYLPK---HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 159 (283)
T ss_pred EEEEecCCCCCCHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCC
Confidence 8999999999999999976 3589999999999999999999999999999999999999999999999999865432
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 876 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~ 876 (975)
.... ........++..|+|||++.+..++.++|||||||++|+|++|..||.....
T Consensus 160 ~~~~------------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~ 215 (283)
T cd05080 160 GHEY------------------------YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPK 215 (283)
T ss_pred cchh------------------------hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcc
Confidence 1100 0011122456679999999888899999999999999999999999865322
Q ss_pred H--H------------HHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 877 Q--K------------TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 877 ~--~------------~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
. + .+..........+....++..+.+++.+||+.+|++||| +++++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps----~~~i~~ 276 (283)
T cd05080 216 KFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPT----FRSLIP 276 (283)
T ss_pred hhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCC----HHHHHH
Confidence 1 0 111111222233334457889999999999999999999 777663
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-30 Score=277.32 Aligned_cols=228 Identities=21% Similarity=0.336 Sum_probs=183.1
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------ccccccCCeEEEEEecc
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------LNRNKTKTHVCLITDYC 724 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------~~~~~~~~~~~lV~Ey~ 724 (975)
..+|++.+.||.|+||.||++.+. .+..+|+|.+..... ........++|+||||+
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFM 81 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcC
Confidence 457999999999999999999885 467899998775321 11222566789999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCc
Q 002051 725 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 804 (975)
Q Consensus 725 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~ 804 (975)
++++|.+++... ...+++..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~------ 154 (256)
T cd05112 82 EHGCLSDYLRAQ-RGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ------ 154 (256)
T ss_pred CCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCc------
Confidence 999999998754 2458899999999999999999999999999999999999999999999999885432110
Q ss_pred chhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 002051 805 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANI 883 (975)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~~i 883 (975)
........++..|+|||.+.+..++.++|||||||++|+|++ |..||...........+
T Consensus 155 --------------------~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~ 214 (256)
T cd05112 155 --------------------YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETI 214 (256)
T ss_pred --------------------ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHH
Confidence 001112235678999999998889999999999999999998 99999887777767666
Q ss_pred HhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 884 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 884 ~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
.... ........+..+.+|+.+||+.+|++||| +.+++++
T Consensus 215 ~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~----~~~~l~~ 254 (256)
T cd05112 215 NAGF-RLYKPRLASQSVYELMQHCWKERPEDRPS----FSLLLHQ 254 (256)
T ss_pred hCCC-CCCCCCCCCHHHHHHHHHHcccChhhCCC----HHHHHHh
Confidence 5432 22223346789999999999999999999 8887753
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-30 Score=277.11 Aligned_cols=224 Identities=21% Similarity=0.331 Sum_probs=181.6
Q ss_pred cccccCCceEEEEEEEeC-CC--eEEEEEEeccchhc-------------------------cccccCCeEEEEEeccCC
Q 002051 675 KPLGSGDTGSVHLVELCG-SG--QYFAMKAMDKGVML-------------------------NRNKTKTHVCLITDYCPG 726 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~-t~--~~vAiK~l~~~~~~-------------------------~~~~~~~~~~lV~Ey~~g 726 (975)
+.||+|+||.||+|.+.. .+ ..||||.+...... ..... ..+++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999999865 33 36999998765331 01113 678999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcch
Q 002051 727 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 806 (975)
Q Consensus 727 gsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 806 (975)
++|.+++.......+++..+..++.|++.||+|||++|++|+||||+||+++.++.+||+|||++........
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~------- 152 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNED------- 152 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEecccccccccccccc-------
Confidence 9999999875435689999999999999999999999999999999999999999999999999866432110
Q ss_pred hhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHh
Q 002051 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILH 885 (975)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~~i~~ 885 (975)
.........++..|+|||++.+..++.++|||||||++|+|++ |..||...+..+....+..
T Consensus 153 -----------------~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~ 215 (257)
T cd05040 153 -----------------HYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDK 215 (257)
T ss_pred -----------------ceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Confidence 0011113456788999999998889999999999999999998 9999988888777777765
Q ss_pred cCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 886 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 886 ~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
....++.....+..+.+++.+||+.+|++||| +.+++.
T Consensus 216 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~~~~ 253 (257)
T cd05040 216 EGERLERPEACPQDIYNVMLQCWAHNPADRPT----FAALRE 253 (257)
T ss_pred cCCcCCCCccCCHHHHHHHHHHCCCCcccCCC----HHHHHH
Confidence 44444444557889999999999999999999 777654
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-30 Score=285.10 Aligned_cols=231 Identities=25% Similarity=0.361 Sum_probs=178.2
Q ss_pred cCCCcccccccccCCceEEEEEEEeC----------------CCeEEEEEEeccchh-----------------------
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCG----------------SGQYFAMKAMDKGVM----------------------- 707 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~----------------t~~~vAiK~l~~~~~----------------------- 707 (975)
..++|++.++||+|+||.||+|.+.. ++..+|+|.+.....
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 82 (296)
T cd05095 3 PRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNII 82 (296)
T ss_pred ChhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcc
Confidence 45689999999999999999986532 345799999864310
Q ss_pred --ccccccCCeEEEEEeccCCCCHHHHHhhCCC---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 002051 708 --LNRNKTKTHVCLITDYCPGGELFLLLDRQPT---------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 776 (975)
Q Consensus 708 --~~~~~~~~~~~lV~Ey~~ggsL~~~l~~~~~---------~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NIL 776 (975)
.........+|+||||+++++|.+++..... ..++...+..++.||+.||.|||++||+|+||||+|||
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nil 162 (296)
T cd05095 83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCL 162 (296)
T ss_pred eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEE
Confidence 1111245678999999999999999976421 24677889999999999999999999999999999999
Q ss_pred EecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHH
Q 002051 777 LQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWA 856 (975)
Q Consensus 777 l~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWS 856 (975)
++.++.++|+|||++....... .........+++.|++||++.+..++.++||||
T Consensus 163 i~~~~~~~l~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwS 217 (296)
T cd05095 163 VGKNYTIKIADFGMSRNLYSGD-------------------------YYRIQGRAVLPIRWMSWESILLGKFTTASDVWA 217 (296)
T ss_pred EcCCCCEEeccCcccccccCCc-------------------------ceeccCcCcCccccCCHHHHhcCCccchhhhhH
Confidence 9999999999999986532110 001112234567899999998888999999999
Q ss_pred HHHHHHHHHh--CCCCCCCCCHHHHHHHHHh------cCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 857 LGILLYEMLY--GYTPFRGKTRQKTFANILH------KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 857 LG~il~ell~--G~~Pf~~~~~~~~~~~i~~------~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
|||++|+|++ |..||...+..+.+..... ....++....++..+.+|+.+||+.||.+||+ +.+|+
T Consensus 218 lG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~~i~ 291 (296)
T cd05095 218 FGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPS----FQEIH 291 (296)
T ss_pred HHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCC----HHHHH
Confidence 9999999997 7899987766665543321 11223444457789999999999999999999 66654
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-30 Score=281.94 Aligned_cols=231 Identities=22% Similarity=0.393 Sum_probs=176.8
Q ss_pred CCCcccccccccCCceEEEEEEE----eCCCeEEEEEEeccchh------------c------------c--ccccCCeE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVM------------L------------N--RNKTKTHV 717 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~----~~t~~~vAiK~l~~~~~------------~------------~--~~~~~~~~ 717 (975)
..+|++++.||+|+||.||+|.. ..++..||+|.+..... + . ...+...+
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 82 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 82 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCce
Confidence 45799999999999999999984 45788999999764310 0 0 01134568
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|+||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 83 ~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 161 (284)
T cd05081 83 RLVMEYLPYGSLRDYLQKH-RERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQD 161 (284)
T ss_pred EEEEEecCCCCHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCC
Confidence 9999999999999999754 245899999999999999999999999999999999999999999999999998654321
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
... ........++..|+|||++.+..++.++|||||||++|+|++|..++......
T Consensus 162 ~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~ 217 (284)
T cd05081 162 KEY------------------------YKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE 217 (284)
T ss_pred Ccc------------------------eeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh
Confidence 100 00011123445699999999888999999999999999999987776433211
Q ss_pred ---------------HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 878 ---------------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 878 ---------------~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
..+..++.....++....++..+.+||.+||..+|++||| +.+|+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt----~~ei~~ 278 (284)
T cd05081 218 FMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPS----FSELAL 278 (284)
T ss_pred hhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCC----HHHHHH
Confidence 1112233334444555667889999999999999999999 777654
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.8e-30 Score=276.96 Aligned_cols=218 Identities=21% Similarity=0.265 Sum_probs=171.7
Q ss_pred ccccCCceEEEEEEEe--CCCeEEEEEEeccchh-------------ccc-----------cccCCeEEEEEeccCCCCH
Q 002051 676 PLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVM-------------LNR-----------NKTKTHVCLITDYCPGGEL 729 (975)
Q Consensus 676 ~LG~G~fG~Vy~a~~~--~t~~~vAiK~l~~~~~-------------~~~-----------~~~~~~~~lV~Ey~~ggsL 729 (975)
.||.|+||.||+|.+. ..+..||+|++..... +.. .......|+||||+++++|
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~L 81 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGPL 81 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCCH
Confidence 4899999999999775 4466799998864320 000 0134568999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhh
Q 002051 730 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 809 (975)
Q Consensus 730 ~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 809 (975)
.+++... ...+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||++.........
T Consensus 82 ~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~--------- 151 (257)
T cd05115 82 NKFLSGK-KDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSY--------- 151 (257)
T ss_pred HHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccc---------
Confidence 9998753 356899999999999999999999999999999999999999999999999998654321110
Q ss_pred hccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCC
Q 002051 810 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDL 888 (975)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~~i~~~~~ 888 (975)
........+++.|+|||++.+..++.++|||||||++|++++ |..||.+.........+..+.
T Consensus 152 ---------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~- 215 (257)
T cd05115 152 ---------------YKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGK- 215 (257)
T ss_pred ---------------eeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC-
Confidence 000111223578999999998889999999999999999996 999999887777665555433
Q ss_pred CCCCCCCCcHHHHHHHHHhcccCccccCCCh
Q 002051 889 KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH 919 (975)
Q Consensus 889 ~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~ 919 (975)
..+.+...+.++.++|.+||.++|++||++.
T Consensus 216 ~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~ 246 (257)
T cd05115 216 RLDCPAECPPEMYALMKDCWIYKWEDRPNFA 246 (257)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence 3344455788999999999999999999933
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.8e-30 Score=282.02 Aligned_cols=228 Identities=21% Similarity=0.295 Sum_probs=179.4
Q ss_pred CcccccccccCCceEEEEEEEeC-----CCeEEEEEEeccchh-------------------------ccccccCCeEEE
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVM-------------------------LNRNKTKTHVCL 719 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~-----t~~~vAiK~l~~~~~-------------------------~~~~~~~~~~~l 719 (975)
+|++.+.||+|+||.||+|.+.. ....+|+|.+..... ..........|+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 48899999999999999998753 235799998764320 111124566889
Q ss_pred EEeccCCCCHHHHHhhC----------------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE
Q 002051 720 ITDYCPGGELFLLLDRQ----------------------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL 777 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~----------------------~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl 777 (975)
||||+.+++|.+++... ....++...+..++.|++.||.|||++||+||||||+|||+
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill 160 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLV 160 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEE
Confidence 99999999999998642 12357889999999999999999999999999999999999
Q ss_pred ecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHH
Q 002051 778 QGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWAL 857 (975)
Q Consensus 778 ~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSL 857 (975)
+.++.+||+|||+++....... ........++..|+|||.+.+..++.++|||||
T Consensus 161 ~~~~~~kl~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~sl 215 (290)
T cd05045 161 AEGRKMKISDFGLSRDVYEEDS-------------------------YVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSF 215 (290)
T ss_pred cCCCcEEeccccccccccCccc-------------------------hhcccCCCCCccccCHHHHccCCcchHhHHHHH
Confidence 9999999999999865321110 001122345678999999988889999999999
Q ss_pred HHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 858 GILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 858 G~il~ell~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
||++|+|++ |..||.+.........+ ......+.....+..+.+|+.+||+.+|.+||+ +.++++
T Consensus 216 G~~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~----~~~i~~ 281 (290)
T cd05045 216 GVLLWEIVTLGGNPYPGIAPERLFNLL-KTGYRMERPENCSEEMYNLMLTCWKQEPDKRPT----FADISK 281 (290)
T ss_pred HHHHHHHHhcCCCCCCCCCHHHHHHHH-hCCCCCCCCCCCCHHHHHHHHHHccCCcccCCC----HHHHHH
Confidence 999999998 99999887766655444 333444555567889999999999999999999 666653
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=274.85 Aligned_cols=226 Identities=24% Similarity=0.358 Sum_probs=184.6
Q ss_pred cccccccccCCceEEEEEEEeCCC----eEEEEEEeccchh-------------------------ccccccCCeEEEEE
Q 002051 671 FRPIKPLGSGDTGSVHLVELCGSG----QYFAMKAMDKGVM-------------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 671 y~i~~~LG~G~fG~Vy~a~~~~t~----~~vAiK~l~~~~~-------------------------~~~~~~~~~~~lV~ 721 (975)
+++.+.||.|+||.||+|.+..++ ..||+|.+..... ..........|+||
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 467889999999999999998766 8999999865421 11112557899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
||+++++|.+++.......+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++........
T Consensus 81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~-- 158 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY-- 158 (258)
T ss_pred eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccc--
Confidence 999999999999764333389999999999999999999999999999999999999999999999999865431100
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTF 880 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~ 880 (975)
.......+++.|+|||.+.+..++.++|||||||++|+|++ |.+||...+.....
T Consensus 159 ------------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~ 214 (258)
T smart00219 159 ------------------------YKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVL 214 (258)
T ss_pred ------------------------cccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 00001236789999999988889999999999999999998 89999887777777
Q ss_pred HHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 881 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 881 ~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
..+..... .+.....+..+.+++.+||..||.+||| +.++++
T Consensus 215 ~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~Rpt----~~~ll~ 256 (258)
T smart00219 215 EYLKKGYR-LPKPENCPPEIYKLMLQCWAEDPEDRPT----FSELVE 256 (258)
T ss_pred HHHhcCCC-CCCCCcCCHHHHHHHHHHCcCChhhCcC----HHHHHh
Confidence 77665443 3334457889999999999999999999 888875
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.9e-30 Score=279.82 Aligned_cols=230 Identities=21% Similarity=0.288 Sum_probs=182.9
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCe----EEEEEEeccchhc-------------ccc-----------ccCCeE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVML-------------NRN-----------KTKTHV 717 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~----~vAiK~l~~~~~~-------------~~~-----------~~~~~~ 717 (975)
+...+|++++.||+|+||.||+|.++.+|. .+|+|.+...... ... ......
T Consensus 4 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 83 (279)
T cd05057 4 LKETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLSSQV 83 (279)
T ss_pred cCHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCce
Confidence 456789999999999999999999877664 6899987654210 000 022567
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
++||||+++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 84 ~~v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~ 162 (279)
T cd05057 84 QLITQLMPLGCLLDYVRNH-KDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVD 162 (279)
T ss_pred EEEEecCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCc
Confidence 8999999999999999764 345899999999999999999999999999999999999999999999999998654311
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 876 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~ 876 (975)
... .......++..|+|||.+....++.++|+|||||++|++++ |..||.+...
T Consensus 163 ~~~-------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~ 217 (279)
T cd05057 163 EKE-------------------------YHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA 217 (279)
T ss_pred ccc-------------------------eecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH
Confidence 100 00011224568999999988889999999999999999998 9999998877
Q ss_pred HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 877 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 877 ~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
.+....+... ..++.+...+..+.+++.+||..||..||+ +.+++
T Consensus 218 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~----~~~l~ 262 (279)
T cd05057 218 VEIPDLLEKG-ERLPQPPICTIDVYMVLVKCWMIDAESRPT----FKELI 262 (279)
T ss_pred HHHHHHHhCC-CCCCCCCCCCHHHHHHHHHHcCCChhhCCC----HHHHH
Confidence 7766655543 334444557789999999999999999999 55554
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=272.59 Aligned_cols=220 Identities=23% Similarity=0.369 Sum_probs=175.1
Q ss_pred cccccCCceEEEEEEEeCCCeEEEEEEeccchh-------------------------ccccccCCeEEEEEeccCCCCH
Q 002051 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-------------------------LNRNKTKTHVCLITDYCPGGEL 729 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-------------------------~~~~~~~~~~~lV~Ey~~ggsL 729 (975)
+.||+|+||.||+|.+. +++.+|+|.+..... ..........|+||||+++++|
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 79 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDF 79 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcH
Confidence 36999999999999864 688999998764320 1111255678999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhh
Q 002051 730 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 809 (975)
Q Consensus 730 ~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 809 (975)
.+++... ...+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++.......
T Consensus 80 ~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~----------- 147 (250)
T cd05085 80 LSFLRKK-KDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGI----------- 147 (250)
T ss_pred HHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccc-----------
Confidence 9998754 2458899999999999999999999999999999999999999999999999885432110
Q ss_pred hccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCC
Q 002051 810 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDL 888 (975)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~~i~~~~~ 888 (975)
........++..|+|||++.+..++.++||||||+++|++++ |..||.+.........+... .
T Consensus 148 ---------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~-~ 211 (250)
T cd05085 148 ---------------YSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKG-Y 211 (250)
T ss_pred ---------------cccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-C
Confidence 001112234677999999998889999999999999999998 99999888776666655543 2
Q ss_pred CCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 889 KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 889 ~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
.......++..+.+|+.+||..+|++||+ +.++++
T Consensus 212 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~l~~ 246 (250)
T cd05085 212 RMSCPQKCPDDVYKVMQRCWDYKPENRPK----FSELQK 246 (250)
T ss_pred CCCCCCCCCHHHHHHHHHHcccCcccCCC----HHHHHH
Confidence 33334457889999999999999999999 666653
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.7e-30 Score=278.40 Aligned_cols=230 Identities=24% Similarity=0.338 Sum_probs=182.0
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCC---CeEEEEEEeccchh-------------ccc-----------cccCCeEE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVM-------------LNR-----------NKTKTHVC 718 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t---~~~vAiK~l~~~~~-------------~~~-----------~~~~~~~~ 718 (975)
+...+|.+.+.||+|+||.||+|.+... ...||||....... +.. .......|
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~ 82 (270)
T cd05056 3 IQREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVW 82 (270)
T ss_pred echhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcE
Confidence 3456799999999999999999998654 35799998764320 000 01345678
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
+||||+++++|.+++... ...++...+..++.||+.||.|||++|++|+||||+|||++.++.++|+|||++.......
T Consensus 83 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 161 (270)
T cd05056 83 IVMELAPLGELRSYLQVN-KYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDES 161 (270)
T ss_pred EEEEcCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeeccccc
Confidence 999999999999999764 2358999999999999999999999999999999999999999999999999886543110
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 877 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~ 877 (975)
. .......++..|+|||.+.+..++.++|||||||++|++++ |..||.+.+..
T Consensus 162 ~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~ 215 (270)
T cd05056 162 Y--------------------------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN 215 (270)
T ss_pred c--------------------------eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH
Confidence 0 00112234568999999988889999999999999999985 99999888777
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
+....+..+. ..+....++..+.++|.+||..+|.+||| +.+++.
T Consensus 216 ~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~~~~ 260 (270)
T cd05056 216 DVIGRIENGE-RLPMPPNCPPTLYSLMTKCWAYDPSKRPR----FTELKA 260 (270)
T ss_pred HHHHHHHcCC-cCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 7666555433 33444567889999999999999999999 777654
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.2e-30 Score=279.77 Aligned_cols=231 Identities=19% Similarity=0.239 Sum_probs=183.8
Q ss_pred ccCCCcccccccccCCceEEEEEEEeC----CCeEEEEEEeccchh-------------------------cc-ccccCC
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCG----SGQYFAMKAMDKGVM-------------------------LN-RNKTKT 715 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~----t~~~vAiK~l~~~~~-------------------------~~-~~~~~~ 715 (975)
+..++|++.+.||+|+||.||+|.+.. ++..|++|.+....- .. ......
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 82 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE 82 (280)
T ss_pred cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 456789999999999999999999976 368899998764310 00 011346
Q ss_pred eEEEEEeccCCCCHHHHHhhCCC------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeecc
Q 002051 716 HVCLITDYCPGGELFLLLDRQPT------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 789 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~------~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG 789 (975)
..+++++|+++++|.+++..... ..+++..+..++.||+.||+|||+++++|+||||+|||++.++.+||+|||
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g 162 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNA 162 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCC
Confidence 78899999999999999876322 458999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CC
Q 002051 790 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GY 868 (975)
Q Consensus 790 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~ 868 (975)
+++.+...... .......++..|+|||++.+..++.++|||||||++|++++ |+
T Consensus 163 ~~~~~~~~~~~-------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~ 217 (280)
T cd05043 163 LSRDLFPMDYH-------------------------CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQ 217 (280)
T ss_pred CcccccCCceE-------------------------EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCC
Confidence 98654321100 00112245678999999998889999999999999999998 99
Q ss_pred CCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 869 TPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 869 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
.||...+..+....+.. ...++....++..+.+++.+||..||++||| +.+++
T Consensus 218 ~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~~~ 270 (280)
T cd05043 218 TPYVEIDPFEMAAYLKD-GYRLAQPINCPDELFAVMACCWALDPEERPS----FSQLV 270 (280)
T ss_pred CCcCcCCHHHHHHHHHc-CCCCCCCCcCCHHHHHHHHHHcCCChhhCCC----HHHHH
Confidence 99988776665544433 3444445557889999999999999999999 66665
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=282.57 Aligned_cols=231 Identities=21% Similarity=0.336 Sum_probs=181.4
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCe----EEEEEEeccchhc-------------cccc-----------cCCeE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVML-------------NRNK-----------TKTHV 717 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~----~vAiK~l~~~~~~-------------~~~~-----------~~~~~ 717 (975)
+..++|++.+.||+|+||.||+|.+..++. .+|+|.+...... .... .....
T Consensus 4 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~ 83 (303)
T cd05110 4 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTI 83 (303)
T ss_pred cchhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCc
Confidence 456789999999999999999999987775 5788877643110 0000 23346
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
++|+||+++|+|.+++... ...+++..+..++.||+.||.|||++||+|+||||+|||++.++.+||+|||+++.....
T Consensus 84 ~~v~e~~~~g~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~ 162 (303)
T cd05110 84 QLVTQLMPHGCLLDYVHEH-KDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 162 (303)
T ss_pred eeeehhcCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCc
Confidence 7999999999999998764 335889999999999999999999999999999999999999999999999998654311
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 876 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~ 876 (975)
... .......++..|+|||++.+..++.++|||||||++|+|++ |..||.+...
T Consensus 163 ~~~-------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~ 217 (303)
T cd05110 163 EKE-------------------------YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT 217 (303)
T ss_pred ccc-------------------------cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 100 01112345778999999999889999999999999999997 9999987665
Q ss_pred HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 877 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 877 ~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
... ..++.....++.....+..+.+++.+||..+|++||+ ++++++
T Consensus 218 ~~~-~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~----~~~l~~ 263 (303)
T cd05110 218 REI-PDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPK----FKELAA 263 (303)
T ss_pred HHH-HHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 444 3444444445555567889999999999999999999 566554
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=276.17 Aligned_cols=226 Identities=23% Similarity=0.338 Sum_probs=184.0
Q ss_pred CcccccccccCCceEEEEEEEeC-CCeEEEEEEeccch-----------------------------------hcccccc
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGV-----------------------------------MLNRNKT 713 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~-t~~~vAiK~l~~~~-----------------------------------~~~~~~~ 713 (975)
.|++.+.||+|+||.||++.+.. +++.+|+|.+.... +......
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48899999999999999999987 78899999875221 0011125
Q ss_pred CCeEEEEEeccCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEeeccC
Q 002051 714 KTHVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDL 790 (975)
Q Consensus 714 ~~~~~lV~Ey~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qIl~aL~yLH~-~gIiHrDIKp~NILl~~~g~vkL~DFG~ 790 (975)
..+.|+||||++|++|.+++.. .....+++..++.++.|++.||.|||+ .+++|+||||+|||++.++.++|+|||.
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence 6789999999999999998754 223568999999999999999999996 6899999999999999999999999999
Q ss_pred CCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCC
Q 002051 791 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 870 (975)
Q Consensus 791 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~P 870 (975)
+....... ......|+..|++||.+.+..++.++|+||||+++|+|++|..|
T Consensus 161 ~~~~~~~~----------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p 212 (269)
T cd08528 161 AKQKQPES----------------------------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPP 212 (269)
T ss_pred eeeccccc----------------------------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCc
Confidence 85532110 12234688999999999988899999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 871 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 871 f~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
|...........+.............+..+.+||.+||+.||++||+ +.|+..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~----~~e~~~ 265 (269)
T cd08528 213 FYSTNMLSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPD----IIQVSA 265 (269)
T ss_pred ccccCHHHHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCC----HHHHHH
Confidence 98877776666666554443333357889999999999999999999 666543
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-30 Score=278.95 Aligned_cols=226 Identities=29% Similarity=0.447 Sum_probs=177.3
Q ss_pred ccccccccCCceEEEEEEEe----CCCeEEEEEEeccch-------------------------hccccccCCeEEEEEe
Q 002051 672 RPIKPLGSGDTGSVHLVELC----GSGQYFAMKAMDKGV-------------------------MLNRNKTKTHVCLITD 722 (975)
Q Consensus 672 ~i~~~LG~G~fG~Vy~a~~~----~t~~~vAiK~l~~~~-------------------------~~~~~~~~~~~~lV~E 722 (975)
++.+.||.|.||.||+|... ..+..|+||.++... +.........+++|||
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e 81 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME 81 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence 45678999999999999998 456789999995421 0111114556899999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
||++|+|.+++.......++...+..|+.||+.||.|||+++++|+||+++|||++.++.+||+|||++........
T Consensus 82 ~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~--- 158 (259)
T PF07714_consen 82 YCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK--- 158 (259)
T ss_dssp --TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS---
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---
Confidence 99999999999986556799999999999999999999999999999999999999999999999999865421110
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFA 881 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~ 881 (975)
........+...|+|||++.+..++.++||||||+++||+++ |+.||...+..+...
T Consensus 159 ----------------------~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~ 216 (259)
T PF07714_consen 159 ----------------------YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIE 216 (259)
T ss_dssp ----------------------EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHH
T ss_pred ----------------------cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 011223346778999999998889999999999999999999 789999888888777
Q ss_pred HHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 882 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 882 ~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
.+... ...+....++..+.++|..||..||.+||| +.+|++
T Consensus 217 ~~~~~-~~~~~~~~~~~~~~~li~~C~~~~p~~RPs----~~~i~~ 257 (259)
T PF07714_consen 217 KLKQG-QRLPIPDNCPKDIYSLIQQCWSHDPEKRPS----FQEILQ 257 (259)
T ss_dssp HHHTT-EETTSBTTSBHHHHHHHHHHT-SSGGGS------HHHHHH
T ss_pred ccccc-ccceeccchhHHHHHHHHHHcCCChhhCcC----HHHHHh
Confidence 77443 334445567899999999999999999999 777753
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=276.21 Aligned_cols=220 Identities=23% Similarity=0.335 Sum_probs=172.7
Q ss_pred cccccCCceEEEEEEEeCCCe--EEEEEEeccch-------------hc-------------cccccCCeEEEEEeccCC
Q 002051 675 KPLGSGDTGSVHLVELCGSGQ--YFAMKAMDKGV-------------ML-------------NRNKTKTHVCLITDYCPG 726 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~~--~vAiK~l~~~~-------------~~-------------~~~~~~~~~~lV~Ey~~g 726 (975)
+.||+|+||.||+|+++.++. .+|+|.+.... ++ ........+|+||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 368999999999999988775 46888876321 00 111134567999999999
Q ss_pred CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCC
Q 002051 727 GELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 792 (975)
Q Consensus 727 gsL~~~l~~~~--------------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~ 792 (975)
++|.+++.... ...++...++.++.|++.||+|||++|++||||||+|||++.++.+||+|||++.
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~ 160 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 160 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCcc
Confidence 99999997532 1247899999999999999999999999999999999999999999999999874
Q ss_pred ccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCC
Q 002051 793 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPF 871 (975)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf 871 (975)
..... ........+..|+|||++....++.++|||||||++|+|++ |..||
T Consensus 161 ~~~~~----------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf 212 (270)
T cd05047 161 GQEVY----------------------------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY 212 (270)
T ss_pred ccchh----------------------------hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCc
Confidence 21100 00111233567999999988889999999999999999996 99999
Q ss_pred CCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 872 RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 872 ~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
.+.+....+..+... ...+.....+..+.+|+.+||..||.+||| +.+++.
T Consensus 213 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~ 263 (270)
T cd05047 213 CGMTCAELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYERPS----FAQILV 263 (270)
T ss_pred cccCHHHHHHHHhCC-CCCCCCCcCCHHHHHHHHHHcccChhhCCC----HHHHHH
Confidence 887776666655443 233334456789999999999999999999 666653
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=294.37 Aligned_cols=239 Identities=20% Similarity=0.223 Sum_probs=175.6
Q ss_pred cccCCCcccccccccCCceEEEEEEEe----------------CCCeEEEEEEeccch------h---------------
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELC----------------GSGQYFAMKAMDKGV------M--------------- 707 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~----------------~t~~~vAiK~l~~~~------~--------------- 707 (975)
.+..++|.+.++||+|+||+||+|... ..++.||||.+.... +
T Consensus 141 r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~ 220 (507)
T PLN03224 141 RWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGM 220 (507)
T ss_pred CccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhH
Confidence 456789999999999999999999752 245679999875311 0
Q ss_pred --------ccc----------------------cccCCeEEEEEeccCCCCHHHHHhhCC--------------------
Q 002051 708 --------LNR----------------------NKTKTHVCLITDYCPGGELFLLLDRQP-------------------- 737 (975)
Q Consensus 708 --------~~~----------------------~~~~~~~~lV~Ey~~ggsL~~~l~~~~-------------------- 737 (975)
+.+ .......+|||||+++++|.+++....
T Consensus 221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~ 300 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN 300 (507)
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence 000 012356799999999999999986421
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCC
Q 002051 738 --TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQ 815 (975)
Q Consensus 738 --~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~ 815 (975)
...++...++.++.|++.+|.|||+++|+||||||+|||++.++.+||+|||++.......
T Consensus 301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~----------------- 363 (507)
T PLN03224 301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI----------------- 363 (507)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCC-----------------
Confidence 1124567788999999999999999999999999999999999999999999985432110
Q ss_pred CCcccccccccccccccCCCCccchhhhcCCC--------------------C--CChhHHHHHHHHHHHHHhCCC-CCC
Q 002051 816 QNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--------------------H--TSAVDWWALGILLYEMLYGYT-PFR 872 (975)
Q Consensus 816 ~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~--------------------~--~~k~DIWSLG~il~ell~G~~-Pf~ 872 (975)
........+++.|+|||.+.... | ..+.||||+||++|+|++|.. ||.
T Consensus 364 ---------~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~ 434 (507)
T PLN03224 364 ---------NFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVA 434 (507)
T ss_pred ---------ccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCcc
Confidence 00011223588999999885432 1 124799999999999999876 775
Q ss_pred CCCHH-----------HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCc---cccCCChhhHHHHHcCCCccC
Q 002051 873 GKTRQ-----------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDP---KSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 873 ~~~~~-----------~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP---~~R~t~~~~~~elL~Hp~f~~ 933 (975)
+.... ..+..+....+.++.....+..+++|+.+||..+| .+|+| ++|+|+||||..
T Consensus 435 ~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlS----a~eaL~Hp~f~~ 505 (507)
T PLN03224 435 NIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLS----VGQALSHRFFLP 505 (507)
T ss_pred chhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCC----HHHHhCCCCcCC
Confidence 42111 11112223445555556678999999999999876 68999 999999999963
|
|
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.3e-30 Score=278.32 Aligned_cols=214 Identities=20% Similarity=0.297 Sum_probs=166.5
Q ss_pred cccccCCceEEEEEEEeCCCe-------EEEEEEeccch------------------------hccccccCCeEEEEEec
Q 002051 675 KPLGSGDTGSVHLVELCGSGQ-------YFAMKAMDKGV------------------------MLNRNKTKTHVCLITDY 723 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~~-------~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~Ey 723 (975)
+.||.|+||.||+|.+..++. .+|+|.+.... +........+.++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 369999999999999866544 38888875431 11111245678999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc--------EEEeeccCCCccC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH--------VSLTDFDLSCLTS 795 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~--------vkL~DFG~a~~~~ 795 (975)
+++|+|..++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++. ++++|||++....
T Consensus 81 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~ 159 (258)
T cd05078 81 VKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVL 159 (258)
T ss_pred CCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccC
Confidence 99999999997642 36899999999999999999999999999999999999987664 6999999874321
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhC-CCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYG-YTPFRG 873 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G-~~Pf~~ 873 (975)
......+++.|+|||++.+ ..++.++|||||||++|+|++| .+||..
T Consensus 160 -------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~ 208 (258)
T cd05078 160 -------------------------------PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSA 208 (258)
T ss_pred -------------------------------CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhh
Confidence 1123467889999999986 4578899999999999999998 567766
Q ss_pred CCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 874 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 874 ~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
.+..... .+......+|. ..+.++.+||.+||+.||++||| +++|++
T Consensus 209 ~~~~~~~-~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~Rps----~~~il~ 255 (258)
T cd05078 209 LDSQKKL-QFYEDRHQLPA--PKWTELANLINQCMDYEPDFRPS----FRAIIR 255 (258)
T ss_pred ccHHHHH-HHHHccccCCC--CCcHHHHHHHHHHhccChhhCCC----HHHHHH
Confidence 5554433 23333333333 35678999999999999999999 888775
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-29 Score=272.22 Aligned_cols=221 Identities=25% Similarity=0.356 Sum_probs=176.9
Q ss_pred cccccCCceEEEEEEEeCCCeEEEEEEeccchhc-------------------------cccccCCeEEEEEeccCCCCH
Q 002051 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-------------------------NRNKTKTHVCLITDYCPGGEL 729 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~-------------------------~~~~~~~~~~lV~Ey~~ggsL 729 (975)
++||.|+||.||+|.+.. ++.||+|.+...... .......+.|+||||++|++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l 79 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSL 79 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence 479999999999999977 999999987653211 111256678999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhh
Q 002051 730 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 809 (975)
Q Consensus 730 ~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 809 (975)
.+++... ...++...+..++.|++.||.|||++|++||||||+|||++.++.++|+|||++........
T Consensus 80 ~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~---------- 148 (251)
T cd05041 80 LTFLRKK-KNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIY---------- 148 (251)
T ss_pred HHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcc----------
Confidence 9999764 24688999999999999999999999999999999999999999999999999865321100
Q ss_pred hccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCC
Q 002051 810 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDL 888 (975)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~~i~~~~~ 888 (975)
........++..|+|||.+.+..++.++|+|||||++|+|++ |..||...........+... .
T Consensus 149 ---------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~-~ 212 (251)
T cd05041 149 ---------------TVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESG-Y 212 (251)
T ss_pred ---------------eeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcC-C
Confidence 000111234567999999998889999999999999999998 89999887766555555432 3
Q ss_pred CCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 889 KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 889 ~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
..+.+...+..+.++|.+||+.+|.+||| +.++++
T Consensus 213 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~ell~ 247 (251)
T cd05041 213 RMPAPQLCPEEIYRLMLQCWAYDPENRPS----FSEIYN 247 (251)
T ss_pred CCCCCccCCHHHHHHHHHHhccChhhCcC----HHHHHH
Confidence 34444557889999999999999999999 888875
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=269.79 Aligned_cols=239 Identities=26% Similarity=0.473 Sum_probs=189.4
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc--------------------------ccc------ccCC
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--------------------------NRN------KTKT 715 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~--------------------------~~~------~~~~ 715 (975)
..+|.-++.+|.|.- .|..|.+.-+++.||+|.+...... ..+ ..-.
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 457999999999999 8888889889999999987654100 000 0234
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
.+|+||||| ..+|...+.. .++...++.|++|++.|+.|||+.||+||||||+||++..++.+|++|||+|+...
T Consensus 95 e~y~v~e~m-~~nl~~vi~~----elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~ 169 (369)
T KOG0665|consen 95 EVYLVMELM-DANLCQVILM----ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTED 169 (369)
T ss_pred hHHHHHHhh-hhHHHHHHHH----hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccC
Confidence 679999999 7799888863 37889999999999999999999999999999999999999999999999996533
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
.. + ..+.++.|..|.|||++.+..|...+||||+||++.||+.|...|.|.+
T Consensus 170 ~~----------------------~------~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d 221 (369)
T KOG0665|consen 170 TD----------------------F------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKD 221 (369)
T ss_pred cc----------------------c------ccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCch
Confidence 11 1 2234678999999999999999999999999999999999999999987
Q ss_pred HHHHHHHHHhc---------------------------CCC----CCCC---------CCCcHHHHHHHHHhcccCcccc
Q 002051 876 RQKTFANILHK---------------------------DLK----FPSS---------TPTSLHAKQLMYRLLHRDPKSR 915 (975)
Q Consensus 876 ~~~~~~~i~~~---------------------------~~~----~p~~---------~~~s~~~~~li~~~L~~dP~~R 915 (975)
..+.+.++... .+. +|.. ...+..+++++.+||..||++|
T Consensus 222 ~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~R 301 (369)
T KOG0665|consen 222 HIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKR 301 (369)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhc
Confidence 77766665431 011 1111 1123467899999999999999
Q ss_pred CCChhhHHHHHcCCCccCCCcchhhccCCCC
Q 002051 916 LGSHEGANEIKKHPFFKGVNWALVRCMNPPE 946 (975)
Q Consensus 916 ~t~~~~~~elL~Hp~f~~~~~~~~~~~~~~~ 946 (975)
+| ++++|.||||+ -|-....+.+|.
T Consensus 302 is----v~daL~HPY~~--vw~~~~ev~ap~ 326 (369)
T KOG0665|consen 302 IS----VDDALRHPYIK--VWYDPDEVEAPP 326 (369)
T ss_pred cc----HHHHhcCCeee--eecccccccCCC
Confidence 99 99999999999 474444444443
|
|
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-29 Score=270.96 Aligned_cols=224 Identities=19% Similarity=0.267 Sum_probs=171.5
Q ss_pred cccccCCceEEEEEEEeC---CCeEEEEEEeccch-------------------------hcc-ccccCCeEEEEEeccC
Q 002051 675 KPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGV-------------------------MLN-RNKTKTHVCLITDYCP 725 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~---t~~~vAiK~l~~~~-------------------------~~~-~~~~~~~~~lV~Ey~~ 725 (975)
+.||+|+||.||+|.+.. .+..||+|.+.... +.. ....+...|+||||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 468999999999998754 34679999875321 000 0113455789999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcc
Q 002051 726 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 805 (975)
Q Consensus 726 ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 805 (975)
+++|.+++.... ..++...+..++.||+.||.|||+++++||||||+|||++.++.+||+|||+++........
T Consensus 81 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~----- 154 (262)
T cd05058 81 HGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY----- 154 (262)
T ss_pred CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcce-----
Confidence 999999997642 34677788889999999999999999999999999999999999999999998653311000
Q ss_pred hhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q 002051 806 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANIL 884 (975)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~~i~ 884 (975)
.........++..|+|||.+.+..++.++|||||||++|+|++ |.+||...+.......+.
T Consensus 155 ------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~ 216 (262)
T cd05058 155 ------------------SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLL 216 (262)
T ss_pred ------------------eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Confidence 0001122345778999999988889999999999999999999 567787777666665555
Q ss_pred hcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 885 HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 885 ~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
.+. ..+.....+..+.+++.+||..+|++||+ +.+++.
T Consensus 217 ~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~~il~ 254 (262)
T cd05058 217 QGR-RLLQPEYCPDPLYEVMLSCWHPKPEMRPT----FSELVS 254 (262)
T ss_pred cCC-CCCCCCcCCHHHHHHHHHHcCCChhhCCC----HHHHHH
Confidence 432 23333446788999999999999999999 777764
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-29 Score=274.33 Aligned_cols=223 Identities=23% Similarity=0.309 Sum_probs=175.3
Q ss_pred cccccCCceEEEEEEEeCCC------eEEEEEEeccch-------------------------hccccccCCeEEEEEec
Q 002051 675 KPLGSGDTGSVHLVELCGSG------QYFAMKAMDKGV-------------------------MLNRNKTKTHVCLITDY 723 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~------~~vAiK~l~~~~-------------------------~~~~~~~~~~~~lV~Ey 723 (975)
+.||.|+||.||+|+++... +.+|+|.+.+.. +..........|+||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 36999999999999986544 789999875431 01112256678999999
Q ss_pred cCCCCHHHHHhhC-----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC-----cEEEeeccCCCc
Q 002051 724 CPGGELFLLLDRQ-----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-----HVSLTDFDLSCL 793 (975)
Q Consensus 724 ~~ggsL~~~l~~~-----~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g-----~vkL~DFG~a~~ 793 (975)
+++++|.+++... ....++...+..++.||+.||.|||+++++|+||||+|||++.++ .++|+|||++..
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~ 160 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD 160 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence 9999999999753 223478899999999999999999999999999999999999877 899999999865
Q ss_pred cCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCC
Q 002051 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFR 872 (975)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~ 872 (975)
..... .........++..|+|||++.+..++.++|||||||++|+|++ |..||.
T Consensus 161 ~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~ 215 (269)
T cd05044 161 IYKSD-------------------------YYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYP 215 (269)
T ss_pred ccccc-------------------------ccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCc
Confidence 32110 0011123345778999999999889999999999999999997 999998
Q ss_pred CCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 873 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 873 ~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
..+..+....+... ..+......+..+.+||.+||..+|.+||+ ++++++
T Consensus 216 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~i~~ 265 (269)
T cd05044 216 ALNNQEVLQHVTAG-GRLQKPENCPDKIYQLMTNCWAQDPSERPT----FDRIQE 265 (269)
T ss_pred ccCHHHHHHHHhcC-CccCCcccchHHHHHHHHHHcCCCcccCCC----HHHHHH
Confidence 87776666555433 233333457889999999999999999999 776653
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.2e-29 Score=272.10 Aligned_cols=223 Identities=22% Similarity=0.341 Sum_probs=167.6
Q ss_pred cccccCCceEEEEEEEeC--CCeEEEEEEeccch-------------------------hccccccCCeEEEEEeccCCC
Q 002051 675 KPLGSGDTGSVHLVELCG--SGQYFAMKAMDKGV-------------------------MLNRNKTKTHVCLITDYCPGG 727 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~--t~~~vAiK~l~~~~-------------------------~~~~~~~~~~~~lV~Ey~~gg 727 (975)
++||+|+||.||+|.... ....+|+|.+.... +.........+|+||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 469999999999997543 44678999765321 011122567789999999999
Q ss_pred CHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCc
Q 002051 728 ELFLLLDRQPT---KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 804 (975)
Q Consensus 728 sL~~~l~~~~~---~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~ 804 (975)
+|.+++..... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~------ 154 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPED------ 154 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccch------
Confidence 99999976422 235678889999999999999999999999999999999999999999999885422110
Q ss_pred chhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-------CCCCChhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002051 805 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-------AGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 876 (975)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-------~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~ 876 (975)
.........+++.|+|||++.. ..++.++|||||||++|+|++ |..||.....
T Consensus 155 -------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~ 215 (269)
T cd05042 155 -------------------YYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD 215 (269)
T ss_pred -------------------heeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH
Confidence 0001123346778999999743 356789999999999999998 8899988777
Q ss_pred HHHHHHHHhcC-CCCCC---CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 877 QKTFANILHKD-LKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 877 ~~~~~~i~~~~-~~~p~---~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
.+.+..+.... ..++. ...++..+.+++..|+ .||++||| +++|++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt----~~~v~~ 265 (269)
T cd05042 216 EQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPT----AEEVHE 265 (269)
T ss_pred HHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccC----HHHHHH
Confidence 76666655432 22222 2346788899999998 59999999 666653
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.9e-30 Score=288.13 Aligned_cols=231 Identities=23% Similarity=0.334 Sum_probs=193.5
Q ss_pred ccccccCCCcccccccccCCceEEEEEEEeCCCe---E-EEEEEeccch---------------------------hccc
Q 002051 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQ---Y-FAMKAMDKGV---------------------------MLNR 710 (975)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~---~-vAiK~l~~~~---------------------------~~~~ 710 (975)
..|++..++..+.++||+|+||.||+|..+..+. . ||+|..+... ++..
T Consensus 150 ~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGV 229 (474)
T KOG0194|consen 150 QKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGV 229 (474)
T ss_pred cccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence 4577888888899999999999999999876432 3 8999887421 1111
Q ss_pred cccCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccC
Q 002051 711 NKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 790 (975)
Q Consensus 711 ~~~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~ 790 (975)
......+|||||+|+||+|.++|++.+. .++..+...++.+.+.||+|||++++|||||-..|+|++.++.+||+|||+
T Consensus 230 a~~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGL 308 (474)
T KOG0194|consen 230 AVLEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGL 308 (474)
T ss_pred EcCCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCcccc
Confidence 1256678999999999999999998643 699999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCCCCCcchhhhhccCCCCCcccccccccccc-cccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CC
Q 002051 791 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASN-SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GY 868 (975)
Q Consensus 791 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~ 868 (975)
++... .. .... ...-...|+|||.+....|+.++|||||||++||+++ |.
T Consensus 309 s~~~~---~~-------------------------~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~ 360 (474)
T KOG0194|consen 309 SRAGS---QY-------------------------VMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGA 360 (474)
T ss_pred ccCCc---ce-------------------------eeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCC
Confidence 86532 00 0001 1124578999999999999999999999999999997 89
Q ss_pred CCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhh
Q 002051 869 TPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 921 (975)
Q Consensus 869 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~ 921 (975)
.||.+....+...+|....+..+.+...+..+..++.+|+..+|++|||+..+
T Consensus 361 ~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i 413 (474)
T KOG0194|consen 361 EPYPGMKNYEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTI 413 (474)
T ss_pred CCCCCCCHHHHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHH
Confidence 99999999999999988888887777788899999999999999999995543
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.5e-30 Score=254.11 Aligned_cols=233 Identities=24% Similarity=0.410 Sum_probs=181.3
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch---------hccccc---------------cCCeEEEEEe
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV---------MLNRNK---------------TKTHVCLITD 722 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~---------~~~~~~---------------~~~~~~lV~E 722 (975)
..++|++++++|+|.|+.||.|....+++.++||+++.-. ++.... ......||+|
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE 115 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFE 115 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhh
Confidence 4678999999999999999999999999999999987432 111111 2344568999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-CCcEEEeeccCCCccCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~-~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
|+++.+...+. ..++...++.++.++++||.|||++||+|||+||.|++++. .-.++|+|+|+|.......
T Consensus 116 ~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~--- 187 (338)
T KOG0668|consen 116 YVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK--- 187 (338)
T ss_pred hhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCCc---
Confidence 99887766654 34888899999999999999999999999999999999995 4579999999997654221
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCC-CCCCHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPF-RGKTRQKT 879 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf-~~~~~~~~ 879 (975)
.-+..+.+..|.-||.+.. ..|+..-|+|||||++..|+..+-|| .|.++.++
T Consensus 188 -------------------------eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQ 242 (338)
T KOG0668|consen 188 -------------------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 242 (338)
T ss_pred -------------------------eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHH
Confidence 1223456778899998865 45788999999999999999887775 56666666
Q ss_pred HHHHHh-------------cCCCC---------------------CCC-CCCcHHHHHHHHHhcccCccccCCChhhHHH
Q 002051 880 FANILH-------------KDLKF---------------------PSS-TPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 924 (975)
Q Consensus 880 ~~~i~~-------------~~~~~---------------------p~~-~~~s~~~~~li~~~L~~dP~~R~t~~~~~~e 924 (975)
+.+|.. -.+.+ +.. .-.++++.|||.++|.+|..+|+| ++|
T Consensus 243 LVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlT----akE 318 (338)
T KOG0668|consen 243 LVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLT----AKE 318 (338)
T ss_pred HHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccc----hHH
Confidence 655532 00000 011 224689999999999999999999 999
Q ss_pred HHcCCCccCCCc
Q 002051 925 IKKHPFFKGVNW 936 (975)
Q Consensus 925 lL~Hp~f~~~~~ 936 (975)
++.||||..+.-
T Consensus 319 am~HpyF~~~~~ 330 (338)
T KOG0668|consen 319 AMAHPYFAPVRE 330 (338)
T ss_pred HhcCchHHHHHH
Confidence 999999986643
|
|
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.5e-29 Score=270.13 Aligned_cols=222 Identities=24% Similarity=0.352 Sum_probs=167.0
Q ss_pred cccccCCceEEEEEEEe--CCCeEEEEEEeccchh-------------------------ccccccCCeEEEEEeccCCC
Q 002051 675 KPLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVM-------------------------LNRNKTKTHVCLITDYCPGG 727 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~--~t~~~vAiK~l~~~~~-------------------------~~~~~~~~~~~lV~Ey~~gg 727 (975)
+.||+|+||.||+|... .++..+|+|.++.... .....+...+|+||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 46999999999999864 3567899998764310 11112456789999999999
Q ss_pred CHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCc
Q 002051 728 ELFLLLDRQP---TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 804 (975)
Q Consensus 728 sL~~~l~~~~---~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~ 804 (975)
+|.+++.... ...++...++.++.|++.||.|||++|++|+||||+||+++.++.+||+|||++........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~----- 155 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY----- 155 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcce-----
Confidence 9999997532 22456778888999999999999999999999999999999999999999999854221100
Q ss_pred chhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-------CCCChhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002051 805 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-------GHTSAVDWWALGILLYEMLY-GYTPFRGKTR 876 (975)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-------~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~ 876 (975)
........|+..|+|||++.+. .++.++|||||||++|+|++ |..||.....
T Consensus 156 --------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~ 215 (269)
T cd05087 156 --------------------YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSD 215 (269)
T ss_pred --------------------eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCCh
Confidence 0112234678899999998642 35779999999999999996 9999987766
Q ss_pred HHHHHHHHhc-CCCCCCC---CCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 877 QKTFANILHK-DLKFPSS---TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 877 ~~~~~~i~~~-~~~~p~~---~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
.+........ ...++.+ ...+..+.++|.+|+ .+|++||| +++|+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt----~~~l~ 264 (269)
T cd05087 216 EQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPS----AEEVH 264 (269)
T ss_pred HHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCC----HHHHH
Confidence 6554443332 2222222 246778999999998 68999999 77775
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-29 Score=273.54 Aligned_cols=231 Identities=22% Similarity=0.365 Sum_probs=179.5
Q ss_pred CCCcccccccccCCceEEEEEEEe----CCCeEEEEEEeccchhc-------------------------cccc--cCCe
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELC----GSGQYFAMKAMDKGVML-------------------------NRNK--TKTH 716 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~----~t~~~vAiK~l~~~~~~-------------------------~~~~--~~~~ 716 (975)
..+|++++.||+|+||.||+|... .+++.||+|++...... .... ...+
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~ 82 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRS 82 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCc
Confidence 457899999999999999999865 34889999988644210 0001 2557
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
.|+||||+++++|.+++.... ..++...+..++.||+.||+|||++|++|+||||+|||++.++.++|+|||.+.....
T Consensus 83 ~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05038 83 LRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPE 161 (284)
T ss_pred eEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEccccccccccc
Confidence 899999999999999997643 3589999999999999999999999999999999999999999999999999865431
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 876 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~ 876 (975)
.... ........++..|++||.+.+..++.++|||||||++|+|++|..||.....
T Consensus 162 ~~~~------------------------~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~ 217 (284)
T cd05038 162 DKDY------------------------YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPA 217 (284)
T ss_pred CCcc------------------------eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccc
Confidence 1000 0011122345679999999888899999999999999999999999865422
Q ss_pred H--------------HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 877 Q--------------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 877 ~--------------~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
. ..+...+......+....++..+.+|+.+||+++|.+||| +.+|+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt----~~ei~~ 278 (284)
T cd05038 218 EFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPS----FADLIL 278 (284)
T ss_pred hhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCC----HHHHHH
Confidence 1 2223334444455555567789999999999999999999 666653
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.8e-29 Score=271.90 Aligned_cols=214 Identities=21% Similarity=0.301 Sum_probs=164.7
Q ss_pred ccccCCceEEEEEEEeCC------------------------CeEEEEEEeccchh------------------------
Q 002051 676 PLGSGDTGSVHLVELCGS------------------------GQYFAMKAMDKGVM------------------------ 707 (975)
Q Consensus 676 ~LG~G~fG~Vy~a~~~~t------------------------~~~vAiK~l~~~~~------------------------ 707 (975)
.||+|+||.||++....+ ...||+|++.....
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 699999999999985322 24588998864311
Q ss_pred ccccccCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC------
Q 002051 708 LNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG------ 781 (975)
Q Consensus 708 ~~~~~~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g------ 781 (975)
..........|+|||||++|+|..++... .+.+++..+..++.||+.||+|||++||+||||||+|||++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~ 160 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTS 160 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCcc
Confidence 11112456789999999999999988653 35689999999999999999999999999999999999998643
Q ss_pred -cEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHH
Q 002051 782 -HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGI 859 (975)
Q Consensus 782 -~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~ 859 (975)
.+|++|||.+..... .....++..|+|||.+.+ ..++.++|||||||
T Consensus 161 ~~~kl~d~g~~~~~~~-------------------------------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~ 209 (274)
T cd05076 161 PFIKLSDPGVSFTALS-------------------------------REERVERIPWIAPECVPGGNSLSTAADKWSFGT 209 (274)
T ss_pred ceeeecCCcccccccc-------------------------------ccccccCCcccCchhhcCCCCCCcHHHHHHHHH
Confidence 489999998743210 012356788999999875 56889999999999
Q ss_pred HHHHHH-hCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 860 LLYEML-YGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 860 il~ell-~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
++|+|+ +|..||......... ........++. ..+..+.++|.+||+.+|++||| +.+||++
T Consensus 210 ~l~el~~~g~~p~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~li~~cl~~~p~~Rps----~~~il~~ 272 (274)
T cd05076 210 TLLEICFDGEVPLKERTPSEKE-RFYEKKHRLPE--PSCKELATLISQCLTYEPTQRPS----FRTILRD 272 (274)
T ss_pred HHHHHHhCCCCCccccChHHHH-HHHHhccCCCC--CCChHHHHHHHHHcccChhhCcC----HHHHHHh
Confidence 999995 799999876654433 23333333332 34568999999999999999999 8888764
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=9e-29 Score=269.48 Aligned_cols=215 Identities=21% Similarity=0.303 Sum_probs=164.9
Q ss_pred cccccCCceEEEEEEEeC------------CCeEEEEEEeccch------------------------hccccccCCeEE
Q 002051 675 KPLGSGDTGSVHLVELCG------------SGQYFAMKAMDKGV------------------------MLNRNKTKTHVC 718 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~------------t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~ 718 (975)
+.||+|+||.||+++... ....+|+|.+.... +..........+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 368999999999998532 23468999875431 111112456778
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc-------EEEeeccCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH-------VSLTDFDLS 791 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~-------vkL~DFG~a 791 (975)
+||||+++++|..++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++. ++++|||++
T Consensus 81 lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~ 159 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRK-SDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIP 159 (262)
T ss_pred EEEecccCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCC
Confidence 999999999999888653 346899999999999999999999999999999999999987654 899999987
Q ss_pred CccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhc-CCCCCChhHHHHHHHHHHHHH-hCCC
Q 002051 792 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEML-YGYT 869 (975)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-~~~~~~k~DIWSLG~il~ell-~G~~ 869 (975)
.... ......++..|+|||++. +..++.++|||||||++|+|+ .|..
T Consensus 160 ~~~~-------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~ 208 (262)
T cd05077 160 ITVL-------------------------------SRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEI 208 (262)
T ss_pred cccc-------------------------------CcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCC
Confidence 4432 111245788899999987 466889999999999999998 5888
Q ss_pred CCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 870 PFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 870 Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
||......+. ......... .....+.++.+||.+||+.||.+||+ +.+|+.+
T Consensus 209 p~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~li~~cl~~dp~~Rp~----~~~il~~ 260 (262)
T cd05077 209 PLKDKTLAEK-ERFYEGQCM--LVTPSCKELADLMTHCMNYDPNQRPF----FRAIMRD 260 (262)
T ss_pred CCCCcchhHH-HHHHhcCcc--CCCCChHHHHHHHHHHcCCChhhCcC----HHHHHHh
Confidence 9876554332 223333222 22334678999999999999999999 8888764
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.2e-29 Score=270.53 Aligned_cols=227 Identities=23% Similarity=0.348 Sum_probs=175.9
Q ss_pred cccccccccCCceEEEEEEEeC---CCeEEEEEEeccchh--------------ccccc---------------cC---C
Q 002051 671 FRPIKPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVM--------------LNRNK---------------TK---T 715 (975)
Q Consensus 671 y~i~~~LG~G~fG~Vy~a~~~~---t~~~vAiK~l~~~~~--------------~~~~~---------------~~---~ 715 (975)
|.+.+.||+|+||.||+|.... +++.||||++..... +.... .. .
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 6788999999999999998653 578999998865311 00000 01 1
Q ss_pred eEEEEEeccCCCCHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCC
Q 002051 716 HVCLITDYCPGGELFLLLDRQ----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 791 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~----~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a 791 (975)
..+++++|+.+|+|.+++... ....++...+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~ 160 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLS 160 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccc
Confidence 347899999999999887532 1125789999999999999999999999999999999999999999999999998
Q ss_pred CccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCC
Q 002051 792 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTP 870 (975)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~P 870 (975)
+....... ........+++.|++||.+.+..++.++|||||||++|+|++ |.+|
T Consensus 161 ~~~~~~~~-------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p 215 (273)
T cd05074 161 KKIYSGDY-------------------------YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTP 215 (273)
T ss_pred ccccCCcc-------------------------eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCC
Confidence 65421110 001122345678999999998889999999999999999998 8999
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 871 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 871 f~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
|.+.+.......+.... .+......+..+.+++.+||+.+|++||| +.+++.
T Consensus 216 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~Rps----~~~~~~ 267 (273)
T cd05074 216 YAGVENSEIYNYLIKGN-RLKQPPDCLEDVYELMCQCWSPEPKCRPS----FQHLRD 267 (273)
T ss_pred CCCCCHHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 98877766665555432 22333456789999999999999999999 777664
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=267.31 Aligned_cols=213 Identities=20% Similarity=0.251 Sum_probs=165.9
Q ss_pred cccccCCceEEEEEEEeCCC----------eEEEEEEeccchh-----------------------ccccccCCeEEEEE
Q 002051 675 KPLGSGDTGSVHLVELCGSG----------QYFAMKAMDKGVM-----------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~----------~~vAiK~l~~~~~-----------------------~~~~~~~~~~~lV~ 721 (975)
+.||+|+||.||++.+..++ ..+++|.+..... ...... ...|+||
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 46999999999999998776 4588887654321 000112 5678999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC-------cEEEeeccCCCcc
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-------HVSLTDFDLSCLT 794 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g-------~vkL~DFG~a~~~ 794 (975)
||+++|+|.+++.... ..++...+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||++...
T Consensus 80 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~ 158 (259)
T cd05037 80 EYVKFGPLDVFLHREK-NNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITV 158 (259)
T ss_pred EcCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccc
Confidence 9999999999998753 2689999999999999999999999999999999999999887 7999999998543
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC--CCCChhHHHHHHHHHHHHHh-CCCCC
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLY-GYTPF 871 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~--~~~~k~DIWSLG~il~ell~-G~~Pf 871 (975)
.. .....++..|+|||++.+. .++.++|||||||++|+|++ |..||
T Consensus 159 ~~-------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~ 207 (259)
T cd05037 159 LS-------------------------------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPL 207 (259)
T ss_pred cc-------------------------------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCc
Confidence 21 1123567789999999876 78899999999999999998 68888
Q ss_pred CCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 872 RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 872 ~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
...+......... .....+. .....+.+||.+||..+|.+||| +.++++
T Consensus 208 ~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~li~~~l~~~p~~Rpt----~~~il~ 256 (259)
T cd05037 208 STLSSSEKERFYQ-DQHRLPM--PDCAELANLINQCWTYDPTKRPS----FRAILR 256 (259)
T ss_pred ccCCchhHHHHHh-cCCCCCC--CCchHHHHHHHHHhccChhhCCC----HHHHHH
Confidence 7765433332222 2222222 22378999999999999999999 777764
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-28 Score=266.46 Aligned_cols=223 Identities=19% Similarity=0.307 Sum_probs=167.0
Q ss_pred cccccCCceEEEEEEEeCC--CeEEEEEEeccch-------------------------hccccccCCeEEEEEeccCCC
Q 002051 675 KPLGSGDTGSVHLVELCGS--GQYFAMKAMDKGV-------------------------MLNRNKTKTHVCLITDYCPGG 727 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t--~~~vAiK~l~~~~-------------------------~~~~~~~~~~~~lV~Ey~~gg 727 (975)
+.||+|+||.||++..... ...+++|.+.... +........++|+|||||++|
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 3699999999999976433 3456777655321 011112456789999999999
Q ss_pred CHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcc
Q 002051 728 ELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 805 (975)
Q Consensus 728 sL~~~l~~~~--~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 805 (975)
+|.+++.... ...++...++.++.||+.||.|||+++++||||||+|||++.++.++|+|||++.......
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~------- 153 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKED------- 153 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcch-------
Confidence 9999997632 2346777888999999999999999999999999999999999999999999874321100
Q ss_pred hhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-------CCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHH
Q 002051 806 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-------AGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 877 (975)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-------~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~ 877 (975)
........+|+..|+|||++.. ..++.++|||||||++|+|++ |..||...+..
T Consensus 154 ------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~ 215 (268)
T cd05086 154 ------------------YIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR 215 (268)
T ss_pred ------------------hhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 0011224568899999998853 235678999999999999996 67899887777
Q ss_pred HHHHHHHhcCC-CCC---CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 878 KTFANILHKDL-KFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 878 ~~~~~i~~~~~-~~p---~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
+.+..+..+.. ..+ .....+..+.+++..|| .+|++||+ +++|++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~----~~~i~~ 264 (268)
T cd05086 216 EVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRAT----AEEVHR 264 (268)
T ss_pred HHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCC----HHHHHH
Confidence 77776655422 211 12346788999999999 68999999 777753
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-30 Score=261.85 Aligned_cols=235 Identities=27% Similarity=0.438 Sum_probs=184.6
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccc--------------hhccccc-----------------cCCeEE
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKG--------------VMLNRNK-----------------TKTHVC 718 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~--------------~~~~~~~-----------------~~~~~~ 718 (975)
+.+.-+.||.|+||.||.+.+..+|+.||+|.+..- .++..+. .-..+|
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 455667899999999999999999999999987432 1111111 112457
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
+|+|+| ..+|..++-. ...++.+.++-+++||+.||.|||+.||.||||||.|+|++.|..+||||||+++.-....
T Consensus 134 V~TELm-QSDLHKIIVS--PQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~ 210 (449)
T KOG0664|consen 134 VLTELM-QSDLHKIIVS--PQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRD 210 (449)
T ss_pred HHHHHH-Hhhhhheecc--CCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhh
Confidence 888988 6688877754 4679999999999999999999999999999999999999999999999999996533111
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
. ...+..+-|.+|+|||++.|. .|+.+.||||+||++.||+..+..|...++.
T Consensus 211 ~--------------------------~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~Pi 264 (449)
T KOG0664|consen 211 R--------------------------LNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPI 264 (449)
T ss_pred h--------------------------hhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChH
Confidence 0 111233568899999999985 5889999999999999999999999988888
Q ss_pred HHHHHHHh-----------------------cCCCCCCC---------CCCcHHHHHHHHHhcccCccccCCChhhHHHH
Q 002051 878 KTFANILH-----------------------KDLKFPSS---------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 925 (975)
Q Consensus 878 ~~~~~i~~-----------------------~~~~~p~~---------~~~s~~~~~li~~~L~~dP~~R~t~~~~~~el 925 (975)
+.++.|.. ...+.|.. ..-.-+..+++.+||.+||++|++ ..+.
T Consensus 265 qQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris----~~~A 340 (449)
T KOG0664|consen 265 EQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRIS----VEEA 340 (449)
T ss_pred HHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCccccc----Hhhh
Confidence 77776643 22222222 122346779999999999999999 9999
Q ss_pred HcCCCccCCCcc
Q 002051 926 KKHPFFKGVNWA 937 (975)
Q Consensus 926 L~Hp~f~~~~~~ 937 (975)
+.|+|..+....
T Consensus 341 ~~~~~~~e~R~r 352 (449)
T KOG0664|consen 341 LQHRYLEEGRLR 352 (449)
T ss_pred ccccccccccee
Confidence 999999876654
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-29 Score=283.10 Aligned_cols=219 Identities=30% Similarity=0.432 Sum_probs=170.4
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-------------cccc--------------cc----CCeEE
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-------------LNRN--------------KT----KTHVC 718 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-------------~~~~--------------~~----~~~~~ 718 (975)
.+..-+.||+|+||.||+++++.+|+.||||.+++... +... .. .....
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 35566789999999999999999999999999876320 0000 02 44568
Q ss_pred EEEeccCCCCHHHHHhh-CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec--CC--cEEEeeccCCCc
Q 002051 719 LITDYCPGGELFLLLDR-QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG--NG--HVSLTDFDLSCL 793 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~-~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~--~g--~vkL~DFG~a~~ 793 (975)
+|||||.||+|..+|.. .....|++..+..++..++.||.|||++||+||||||.||++.. +| ..||+|||.|+.
T Consensus 94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Are 173 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARE 173 (732)
T ss_pred EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccccccc
Confidence 99999999999999976 22346999999999999999999999999999999999999963 33 479999999987
Q ss_pred cCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCC
Q 002051 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFR 872 (975)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~ 872 (975)
++.+ ....+++||+.|.+||.+.. ..|+..+|.|||||++|+++||..||.
T Consensus 174 l~d~----------------------------s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~ 225 (732)
T KOG4250|consen 174 LDDN----------------------------SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFI 225 (732)
T ss_pred CCCC----------------------------CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCC
Confidence 6532 13457899999999999984 888999999999999999999999995
Q ss_pred CCC----HHHHHHHHHhc-------------------CCCCCCCCCCcHH----HHHHHHHhcccCccccC
Q 002051 873 GKT----RQKTFANILHK-------------------DLKFPSSTPTSLH----AKQLMYRLLHRDPKSRL 916 (975)
Q Consensus 873 ~~~----~~~~~~~i~~~-------------------~~~~p~~~~~s~~----~~~li~~~L~~dP~~R~ 916 (975)
.-. ..++...+..+ ...+|.+..++.. +-.++..+|..+|.+|.
T Consensus 226 p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 226 PFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred cCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 422 22333333321 1223333334433 45788889999999998
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-29 Score=290.24 Aligned_cols=228 Identities=25% Similarity=0.394 Sum_probs=192.7
Q ss_pred cccCCCcccccccccCCceEEEEEEEeC-----CCeEEEEEEeccchh-------------------------ccccccC
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVM-------------------------LNRNKTK 714 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~-----t~~~vAiK~l~~~~~-------------------------~~~~~~~ 714 (975)
.+...+.++.++||+|+||+||+|+... ..+.||||.++...- +.....+
T Consensus 482 ~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~ 561 (774)
T KOG1026|consen 482 EIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREG 561 (774)
T ss_pred EechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccC
Confidence 5677788999999999999999998643 347899999986531 1111267
Q ss_pred CeEEEEEeccCCCCHHHHHhhCC------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc
Q 002051 715 THVCLITDYCPGGELFLLLDRQP------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 782 (975)
Q Consensus 715 ~~~~lV~Ey~~ggsL~~~l~~~~------------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~ 782 (975)
+-+|+|+|||..|||..+|.... ...++..+...|+.||+.|++||-++.+|||||-..|.||..+-.
T Consensus 562 ~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~ 641 (774)
T KOG1026|consen 562 DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLV 641 (774)
T ss_pred CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceE
Confidence 78899999999999999997421 123889999999999999999999999999999999999999999
Q ss_pred EEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHH
Q 002051 783 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 862 (975)
Q Consensus 783 vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ 862 (975)
|||+|||+++..-... .+.......-...|||||.+....|+.++||||+|++||
T Consensus 642 VKIsDfGLsRdiYssD-------------------------YYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLW 696 (774)
T KOG1026|consen 642 VKISDFGLSRDIYSSD-------------------------YYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLW 696 (774)
T ss_pred EEecccccchhhhhhh-------------------------hhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhh
Confidence 9999999997532111 111111223467899999999999999999999999999
Q ss_pred HHH-hCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCC
Q 002051 863 EML-YGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS 918 (975)
Q Consensus 863 ell-~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~ 918 (975)
|++ +|+.||.+.+.++.++.|..+.. ++.+..++.++.+||..||+.+|.+||++
T Consensus 697 EIFsyG~QPy~glSn~EVIe~i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF 752 (774)
T KOG1026|consen 697 EIFSYGKQPYYGLSNQEVIECIRAGQL-LSCPENCPTEVYSLMLECWNENPKRRPSF 752 (774)
T ss_pred hhhccccCcccccchHHHHHHHHcCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCH
Confidence 999 49999999999999999999988 88888999999999999999999999993
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=295.77 Aligned_cols=229 Identities=21% Similarity=0.356 Sum_probs=187.4
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCC-----eEEEEEEeccch-------------hccccc------------cCC
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSG-----QYFAMKAMDKGV-------------MLNRNK------------TKT 715 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~-----~~vAiK~l~~~~-------------~~~~~~------------~~~ 715 (975)
++...-++.+.||+|.||.||.|...... ..||||.+.+.. ++..+. ...
T Consensus 689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~ 768 (1025)
T KOG1095|consen 689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG 768 (1025)
T ss_pred CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC
Confidence 44556788899999999999999986543 349999887642 111111 455
Q ss_pred eEEEEEeccCCCCHHHHHhhC-----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQ-----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 790 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~-----~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~ 790 (975)
..+|++|||.||+|..+|++- ....++......++.+|++|+.||+++++|||||-..|+|++....|||+|||+
T Consensus 769 ~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGl 848 (1025)
T KOG1095|consen 769 PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGL 848 (1025)
T ss_pred CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccch
Confidence 678999999999999999863 134688999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCC
Q 002051 791 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYT 869 (975)
Q Consensus 791 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~ 869 (975)
|+.+-... .+.......-...|||||.+....++.|+||||||++|||+++ |..
T Consensus 849 ArDiy~~~-------------------------yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~ 903 (1025)
T KOG1095|consen 849 ARDIYDKD-------------------------YYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGAT 903 (1025)
T ss_pred hHhhhhch-------------------------heeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCC
Confidence 97432110 0111112233568999999999999999999999999999996 999
Q ss_pred CCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChh
Q 002051 870 PFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 920 (975)
Q Consensus 870 Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~ 920 (975)
||.+.++.+++.-++.+. .++.+..++..+.++|..||+.+|++||++..
T Consensus 904 PY~~~~n~~v~~~~~~gg-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~ 953 (1025)
T KOG1095|consen 904 PYPSRSNFEVLLDVLEGG-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRT 953 (1025)
T ss_pred CCCCcchHHHHHHHHhCC-ccCCCCCCChHHHHHHHHHccCChhhCccHHH
Confidence 999999999998787776 77777778899999999999999999999443
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=270.01 Aligned_cols=229 Identities=25% Similarity=0.313 Sum_probs=171.5
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc------------------------cccccCC-eEEEEEe
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML------------------------NRNKTKT-HVCLITD 722 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~------------------------~~~~~~~-~~~lV~E 722 (975)
.++|.--..||+|+||.||+|..... ..||||.+...... ....+.. +.+||+|
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l~~~-~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYE 152 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVLSDG-TVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYE 152 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEECCC-CEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEEE
Confidence 36788889999999999999998544 89999987654321 1111445 5999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCCCCEEEecCCcEEEeeccCCCccCC-CC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG---IIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC-KP 798 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~g---IiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~-~~ 798 (975)
||++|+|.++|.......+++....+|+.+++.||+|||... ||||||||+|||+|.+...||+|||+|+.... ..
T Consensus 153 ym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~ 232 (361)
T KOG1187|consen 153 YMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDT 232 (361)
T ss_pred ccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCcccc
Confidence 999999999998753327899999999999999999999853 99999999999999999999999999955331 10
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccc-cCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC--
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSF-VGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT-- 875 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~-- 875 (975)
..... .||..|++||++..+..+.|+||||||++|.||++|+.+.....
T Consensus 233 ----------------------------~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~ 284 (361)
T KOG1187|consen 233 ----------------------------SVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPR 284 (361)
T ss_pred ----------------------------ceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCc
Confidence 00111 79999999999998889999999999999999999998886432
Q ss_pred -HHHHHH---HHHhc-CC---CCCCC--CCCc-----HHHHHHHHHhcccCccccCCChhhHHHH
Q 002051 876 -RQKTFA---NILHK-DL---KFPSS--TPTS-----LHAKQLMYRLLHRDPKSRLGSHEGANEI 925 (975)
Q Consensus 876 -~~~~~~---~i~~~-~~---~~p~~--~~~s-----~~~~~li~~~L~~dP~~R~t~~~~~~el 925 (975)
...... ..+.. .+ --|.. ...+ ..+..+..+|++.+|..||++.+++.++
T Consensus 285 ~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L 349 (361)
T KOG1187|consen 285 GELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKEL 349 (361)
T ss_pred ccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHH
Confidence 111111 11111 11 00110 1122 2356788899999999999965554444
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.7e-28 Score=265.06 Aligned_cols=231 Identities=23% Similarity=0.303 Sum_probs=194.3
Q ss_pred ccccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------ccccccCCeEE
Q 002051 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------LNRNKTKTHVC 718 (975)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------~~~~~~~~~~~ 718 (975)
+.|.+...+...-++||.|.||.||.+.++...-.||||.++...+ +........+|
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFY 339 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFY 339 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeE
Confidence 3456666778888999999999999999999999999998875432 11222566789
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
||+|||..|+|.+||.......++.-.+..++.||..|+.||..+++|||||-..|.|+..+..||++|||+++.+..+.
T Consensus 340 IiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDT 419 (1157)
T KOG4278|consen 340 IITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDT 419 (1157)
T ss_pred EEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCc
Confidence 99999999999999998766678888889999999999999999999999999999999999999999999998765321
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 877 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~ 877 (975)
+.......-...|.|||-+....++.|+|||+||++|||+.+ |..||.+.+..
T Consensus 420 --------------------------YTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS 473 (1157)
T KOG4278|consen 420 --------------------------YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 473 (1157)
T ss_pred --------------------------eecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHH
Confidence 111112234667999999999999999999999999999995 99999997654
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH 919 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~ 919 (975)
. .+.++...+.+..+..+++.+..||+.||++.|.+||++.
T Consensus 474 q-VY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFa 514 (1157)
T KOG4278|consen 474 Q-VYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFA 514 (1157)
T ss_pred H-HHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHH
Confidence 4 5566777788888888999999999999999999999954
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.9e-27 Score=249.36 Aligned_cols=217 Identities=43% Similarity=0.724 Sum_probs=177.9
Q ss_pred CceEEEEEEEeCCCeEEEEEEeccchhc-------------------------cccccCCeEEEEEeccCCCCHHHHHhh
Q 002051 681 DTGSVHLVELCGSGQYFAMKAMDKGVML-------------------------NRNKTKTHVCLITDYCPGGELFLLLDR 735 (975)
Q Consensus 681 ~fG~Vy~a~~~~t~~~vAiK~l~~~~~~-------------------------~~~~~~~~~~lV~Ey~~ggsL~~~l~~ 735 (975)
+||.||+|.+..+|+.+|+|++...... .........++++||+.+++|..++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 5899999999999999999998653211 111145788999999999999999976
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCC
Q 002051 736 QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQ 815 (975)
Q Consensus 736 ~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~ 815 (975)
.. .++...+..++.+++.+|.|||+.+++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~--~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~----------------- 141 (244)
T smart00220 81 RG--RLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG----------------- 141 (244)
T ss_pred cc--CCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc-----------------
Confidence 42 38999999999999999999999999999999999999999999999999986543210
Q ss_pred CCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHhcCCCCCCCC
Q 002051 816 QNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG-KTRQKTFANILHKDLKFPSST 894 (975)
Q Consensus 816 ~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~-~~~~~~~~~i~~~~~~~p~~~ 894 (975)
......++..|++||.+.+..++.++||||||+++|+|++|..||.. .........+...........
T Consensus 142 -----------~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (244)
T smart00220 142 -----------LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPE 210 (244)
T ss_pred -----------ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCcccc
Confidence 12234678899999999988889999999999999999999999987 444444444444433333322
Q ss_pred C-CcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 895 P-TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 895 ~-~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
. ++..+.+++.+||..+|++||+ +.++++||||
T Consensus 211 ~~~~~~~~~~i~~~l~~~p~~Rp~----~~~~~~~~~~ 244 (244)
T smart00220 211 WKISPEAKDLIRKLLVKDPEKRLT----AEEALQHPFF 244 (244)
T ss_pred ccCCHHHHHHHHHHccCCchhccC----HHHHhhCCCC
Confidence 2 7789999999999999999999 9999999997
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-28 Score=237.82 Aligned_cols=198 Identities=26% Similarity=0.382 Sum_probs=158.0
Q ss_pred ccccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------------------hccccccCC
Q 002051 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------------------MLNRNKTKT 715 (975)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------------~~~~~~~~~ 715 (975)
.+..+..++...+..||+|++|.|-+.+|..+|+..|+|.+.-.. ++.......
T Consensus 39 ~~~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~reg 118 (282)
T KOG0984|consen 39 RNFEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREG 118 (282)
T ss_pred CccccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccc
Confidence 334566677888899999999999999999999999999875432 111222567
Q ss_pred eEEEEEeccCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEeeccCCC
Q 002051 716 HVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSC 792 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qIl~aL~yLH~~-gIiHrDIKp~NILl~~~g~vkL~DFG~a~ 792 (975)
.++|.||.| .-+|..+-.+ ..++.++|..+-+|+..++.||.|||++ ++||||+||+|||++.+|+||+||||++-
T Consensus 119 dvwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG 197 (282)
T KOG0984|consen 119 DVWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISG 197 (282)
T ss_pred cEEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccce
Confidence 788999999 5566554432 2356899999999999999999999987 99999999999999999999999999985
Q ss_pred ccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC----CCCCChhHHHHHHHHHHHHHhCC
Q 002051 793 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG----AGHTSAVDWWALGILLYEMLYGY 868 (975)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~----~~~~~k~DIWSLG~il~ell~G~ 868 (975)
.+..+- ..+.-.|...|||||.+.. ..|+-++||||||++++||.+++
T Consensus 198 ~L~dSi----------------------------Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr 249 (282)
T KOG0984|consen 198 YLVDSI----------------------------AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILR 249 (282)
T ss_pred eehhhh----------------------------HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcc
Confidence 543110 1112468889999998843 46888999999999999999999
Q ss_pred CCCCC-CCHHHHHHHHHhcCC
Q 002051 869 TPFRG-KTRQKTFANILHKDL 888 (975)
Q Consensus 869 ~Pf~~-~~~~~~~~~i~~~~~ 888 (975)
.||.. .++.+++.+++....
T Consensus 250 ~PY~~w~tpF~qLkqvVeep~ 270 (282)
T KOG0984|consen 250 FPYESWGTPFQQLKQVVEEPS 270 (282)
T ss_pred ccccccCCHHHHHHHHhcCCC
Confidence 99976 567788888877543
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-28 Score=273.83 Aligned_cols=247 Identities=27% Similarity=0.423 Sum_probs=205.3
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEEe
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITD 722 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~E 722 (975)
+.++|..+..+|.|+||.||+++++.+++..|+|+++..- +...+.....++|+||
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME 92 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME 92 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence 3568999999999999999999999999999999987652 1122224567899999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
||.||+|.+.-.- .+++++.++..+++..++||+|||++|-+|||||-.|||++..|.+|+.|||.+..+..
T Consensus 93 ycgggslQdiy~~--TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqita------ 164 (829)
T KOG0576|consen 93 YCGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITA------ 164 (829)
T ss_pred ecCCCcccceeee--cccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhh------
Confidence 9999999998744 57899999999999999999999999999999999999999999999999999865432
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhh---cCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII---AGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l---~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
......++.|||+|||||+- +...|...||||++|++..|+---++|.....+...
T Consensus 165 ---------------------ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~ 223 (829)
T KOG0576|consen 165 ---------------------TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRA 223 (829)
T ss_pred ---------------------hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHH
Confidence 12344678999999999975 556799999999999999999988899878788777
Q ss_pred HHHHHhcCCCCCC---CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCC-----cchhhccCCCC
Q 002051 880 FANILHKDLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN-----WALVRCMNPPE 946 (975)
Q Consensus 880 ~~~i~~~~~~~p~---~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~-----~~~~~~~~~~~ 946 (975)
+.......+..|. ....++.+.+|++.+|.++|.+||| ++.+|.|||...-- -..+.+.+.|.
T Consensus 224 l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRpt----aeklL~h~fvs~~l~~rl~~eLLdK~n~P~ 294 (829)
T KOG0576|consen 224 LFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPT----AEKLLQHPFVSQTLSRRLAIELLDKVNNPN 294 (829)
T ss_pred HHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCC----hhhheeceeeccchhhHHHHHHHHHccCCC
Confidence 7766665555443 3557889999999999999999999 99999999997542 22445555554
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=264.98 Aligned_cols=227 Identities=22% Similarity=0.337 Sum_probs=184.1
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCC----CeEEEEEEeccch------------hccccc------------cCCeE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGS----GQYFAMKAMDKGV------------MLNRNK------------TKTHV 717 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t----~~~vAiK~l~~~~------------~~~~~~------------~~~~~ 717 (975)
+......+.+.||.|.||.||+|....- .--||||..+... .+.+.. ....+
T Consensus 386 l~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P~ 465 (974)
T KOG4257|consen 386 LRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQPM 465 (974)
T ss_pred eehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccce
Confidence 4445566678999999999999987432 3469999887632 111111 34557
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
+||||+++-|.|..|++.+ ...++......+++||+.||.|||+.++|||||-..|||+.....|||+|||+++.+...
T Consensus 466 WivmEL~~~GELr~yLq~n-k~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~ 544 (974)
T KOG4257|consen 466 WIVMELAPLGELREYLQQN-KDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDD 544 (974)
T ss_pred eEEEecccchhHHHHHHhc-cccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhcccc
Confidence 8999999999999999875 456899999999999999999999999999999999999999999999999999876532
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHH-hCCCCCCCCCH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTR 876 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell-~G~~Pf~~~~~ 876 (975)
.-. ......-...|||||-++-..++.++|||-||+++||++ .|..||.+-.+
T Consensus 545 ~yY--------------------------kaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN 598 (974)
T KOG4257|consen 545 AYY--------------------------KASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKN 598 (974)
T ss_pred chh--------------------------hccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccc
Confidence 211 111223356799999999999999999999999999998 59999999877
Q ss_pred HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChh
Q 002051 877 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 920 (975)
Q Consensus 877 ~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~ 920 (975)
.+.+-.+-++ -.+|.+.++++.+..|+.+||.++|.+||.+.+
T Consensus 599 sDVI~~iEnG-eRlP~P~nCPp~LYslmskcWayeP~kRPrfte 641 (974)
T KOG4257|consen 599 SDVIGHIENG-ERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTE 641 (974)
T ss_pred cceEEEecCC-CCCCCCCCCChHHHHHHHHHhccCcccCCcHHH
Confidence 7766555554 367777889999999999999999999999654
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-27 Score=267.64 Aligned_cols=227 Identities=22% Similarity=0.304 Sum_probs=188.9
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCC-C--eEEEEEEeccchhcc---cc---------cc------------CCeEE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGS-G--QYFAMKAMDKGVMLN---RN---------KT------------KTHVC 718 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t-~--~~vAiK~l~~~~~~~---~~---------~~------------~~~~~ 718 (975)
|..++.++.++||+|+||.|+.+.++.. | -.||||+++...... .+ -. ...+.
T Consensus 107 Ipee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp~m 186 (1039)
T KOG0199|consen 107 IPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQPAM 186 (1039)
T ss_pred ccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccchhh
Confidence 4566788899999999999999998753 3 369999987654221 00 01 13345
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
||||+++.|+|.+.|.+.....|....+..++.||+.||.||.++++|||||-..|+|+-....|||||||+.+.+..+.
T Consensus 187 MV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ne 266 (1039)
T KOG0199|consen 187 MVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENE 266 (1039)
T ss_pred HHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCC
Confidence 89999999999999998667789999999999999999999999999999999999999999999999999998876443
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 877 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~ 877 (975)
... .......-...|+|||.++-..++.++|+|++|+++|||++ |..||.|....
T Consensus 267 d~Y------------------------vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~ 322 (1039)
T KOG0199|consen 267 DMY------------------------VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI 322 (1039)
T ss_pred cce------------------------EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH
Confidence 211 01111223567999999999999999999999999999995 99999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCC
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLG 917 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t 917 (975)
.++++|- ..-.++.+..++.++.++++.||..+|++|||
T Consensus 323 qIL~~iD-~~erLpRPk~csedIY~imk~cWah~paDRpt 361 (1039)
T KOG0199|consen 323 QILKNID-AGERLPRPKYCSEDIYQIMKNCWAHNPADRPT 361 (1039)
T ss_pred HHHHhcc-ccccCCCCCCChHHHHHHHHHhccCCcccccc
Confidence 9999887 45567777789999999999999999999999
|
|
| >PRK09776 putative diguanylate cyclase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.8e-27 Score=307.38 Aligned_cols=381 Identities=15% Similarity=0.145 Sum_probs=262.3
Q ss_pred ccccccccCcchHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHH
Q 002051 176 DEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRE 255 (975)
Q Consensus 176 ~~~~~e~~L~~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~ 255 (975)
.....++.+++++++++.+++.++++|+++|. +|+|+++|+++++++||+.+|++|+++..+.++++.......+..
T Consensus 270 ~~r~~~~~l~~~e~r~~~l~e~~~~~i~~~d~---dG~i~~~N~~~~~l~G~~~~el~g~~~~~~~~~~d~~~~~~~~~~ 346 (1092)
T PRK09776 270 AFRAERKHISESETRFRNAMEYSAIGMALVGT---EGQWLQVNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEK 346 (1092)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCceEEEEcC---CCcEEehhHHHHHHhCCCHHHHccCCceeccCcchhHhHHHHHHH
Confidence 34455667888999999999999999999999 999999999999999999999999998888888776666666655
Q ss_pred HHHcC-CcEEEEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHhhhcCCCCCchhhhhHHHHHHHH
Q 002051 256 TLQNG-QSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEM 334 (975)
Q Consensus 256 ~l~~g-~~~~~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~~~~~~l~~r~~~~d~~~~~~ 334 (975)
.+.++ ..+..+.+..++||+.+|+.++..++++.+|.+.+++++++|||++|++|++++..+
T Consensus 347 ~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~~~g~~~~~i~~~~DITerk~~e~~l~~~~----------------- 409 (1092)
T PRK09776 347 LLSGEINSYSMEKRYYRRDGEVVWALLAVSLVRDTDGTPLYFIAQIEDINELKRTEQVNERLM----------------- 409 (1092)
T ss_pred HHcCCccceeeeeEEEcCCCCEEEEEEEEEEEECCCCCEeeehhhHHhhHHHHHHHHHHHHHH-----------------
Confidence 55544 246778888999999999999999999999999999999999999999998876311
Q ss_pred HHhhHHHHHHHhc-CccccccCCCCCcccccCCCchhhhhhccccCC-CCCCCCCCCCCCCCCC--cccccccccccccc
Q 002051 335 ATSSVTELVQAMK-KPRSLSESTNRPPIIRKSEGGVEEERAGALGRR-KSENVPPPRRNSYGGG--CRTSMQRISEVPEK 410 (975)
Q Consensus 335 ~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 410 (975)
+.+..+..... ..+.++.++...+++.......|+...+..+.. +...+.+..+...... ..............
T Consensus 410 --~~~~~~~~~~~~~i~~~d~~~~~~~~n~~~~~l~G~~~~~~~~~~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~e~r 487 (1092)
T PRK09776 410 --ERITLANEAGGIGIWEWDLKPNIISWDKRMFELYEIPPHIKPTWQVWYACLHPEDRQRVEKEIRDALQGRSPFKLEFR 487 (1092)
T ss_pred --HHHHHHHHhcCceEEEEecCCCeEeeCHHHHHHhCCCcccCCCHHHHHHhcCHhHHHHHHHHHHHHHhcCCCeeEEEE
Confidence 11111222211 122333334444444433334444333211100 0000111000000000 00000011112223
Q ss_pred cccccCcccccccccccccCCCCCCcccchhhhcCCCCCCCCCCCCCchhhHHHHHHHhhc-CcHHHHHHhccCcEEEEc
Q 002051 411 KKQKSGRRSFMGLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKG-IDLATTLERIEKNFVITD 489 (975)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~er~~~~~~l~~~-~~l~~i~e~~~d~i~i~D 489 (975)
..+++| ..|......+....+ +...+..+..+|||+||+.++++++. +.++.++++++++|+++|
T Consensus 488 ~~~~dG-~~w~~~~~~~~~d~~-------------G~~~~~ig~~~DITerk~~e~~L~~~~~~l~~~l~~~~~~i~~~D 553 (1092)
T PRK09776 488 IVVKDG-VRHIRALANRVLNKD-------------GEVERLLGINMDMTEVRQLNEALFQEKERLHITLDSIGEAVVCTD 553 (1092)
T ss_pred EEcCCc-eEEEEEeeEEEECCC-------------CCEEEEEeeeeehhHHHHHHHHHHHHHHHHHHHHhccccEEEEEC
Confidence 345566 555555444433322 22333445568999999999988876 678999999999999999
Q ss_pred CCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCC--CCHHHHHHHHHHHHcCCc--EEEEEEEEccCCcEEEEEEE
Q 002051 490 PRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPE--TDPATVRKIRAAIDNQTD--VTVQLINYTKSGKKFWNLFH 565 (975)
Q Consensus 490 ~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~--~~~~~~~~~~~~l~~g~~--~~~e~~~~~kdG~~~wv~~~ 565 (975)
.+|+ |+++|+++++++||+.+|++|++...+.+.. ........+......... +..+....++||+.+|+.++
T Consensus 554 ~~g~---i~~~N~a~~~l~G~~~~e~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 630 (1092)
T PRK09776 554 MAMK---VTFMNPVAEKMTGWTQEEALGVPLLTVLHITFGDNGPLMENIYSCLTSRSAAYLEQDVVLHCRSGGSYDVHYS 630 (1092)
T ss_pred CCCe---EEEEcHHHHHHhCCCHHHHcCCCHHHHcccccCCcchhhHHHHHHHhcCCCccccceEEEEeCCCcEEEEEEE
Confidence 9766 9999999999999999999999866554322 222222234444444433 45677888999999999999
Q ss_pred EeeeecCCCCEEEEEEEeecCCcccccccC
Q 002051 566 LQPMRDQKGEVQYFIGVQLDGSEHLEPLRN 595 (975)
Q Consensus 566 ~~pi~d~~G~i~~~v~i~rDITerk~~e~~ 595 (975)
..|++|.+|++.|++++++|||++|+.+++
T Consensus 631 ~~pi~~~~g~~~g~v~~~~DITe~k~~e~~ 660 (1092)
T PRK09776 631 ITPLSTLDGENIGSVLVIQDVTESRKMLRQ 660 (1092)
T ss_pred eeeeecCCCCEEEEEEEEEecchHHHHHHH
Confidence 999999999999999999999999885543
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-27 Score=274.77 Aligned_cols=230 Identities=27% Similarity=0.420 Sum_probs=177.7
Q ss_pred cccccccccCCceE-EEEEEEeCCCeEEEEEEeccch----------------------hccccccCCeEEEEEeccCCC
Q 002051 671 FRPIKPLGSGDTGS-VHLVELCGSGQYFAMKAMDKGV----------------------MLNRNKTKTHVCLITDYCPGG 727 (975)
Q Consensus 671 y~i~~~LG~G~fG~-Vy~a~~~~t~~~vAiK~l~~~~----------------------~~~~~~~~~~~~lV~Ey~~gg 727 (975)
|.--+.+|.|+.|+ ||++.. .|+.||||.+-.+. +.....+..+.||..|+| ..
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC-~~ 587 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY--EGREVAVKRLLEEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC-AC 587 (903)
T ss_pred eccHHHcccCCCCcEEEEEee--CCceehHHHHhhHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-hh
Confidence 45557799999986 588887 57899999875432 122234788999999999 77
Q ss_pred CHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec---CC--cEEEeeccCCCccCCCCCC
Q 002051 728 ELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NG--HVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 728 sL~~~l~~~--~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~---~g--~vkL~DFG~a~~~~~~~~~ 800 (975)
+|.+++... .......-..+.++.|+++||++||+.+||||||||.||||.. ++ .++|+|||+++.......-
T Consensus 588 sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS 667 (903)
T KOG1027|consen 588 SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSS 667 (903)
T ss_pred hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcch
Confidence 999999873 1111111345778999999999999999999999999999986 33 6899999999887644221
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhC-CCCCCCCCHHHH
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYG-YTPFRGKTRQKT 879 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G-~~Pf~~~~~~~~ 879 (975)
........||-.|+|||++.......++|||||||++|+.++| .+||... .+.
T Consensus 668 ------------------------~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~--~~R 721 (903)
T KOG1027|consen 668 ------------------------FSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDS--LER 721 (903)
T ss_pred ------------------------hhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCch--HHh
Confidence 1223456799999999999998888899999999999999975 9999654 334
Q ss_pred HHHHHhcCCCCCCCCC-CcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 880 FANILHKDLKFPSSTP-TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 880 ~~~i~~~~~~~p~~~~-~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
-.+|+.+...+-.... ...++.+||.+||.++|..||+ |.++|.||+|-.
T Consensus 722 ~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPs----a~~VL~HPlFW~ 772 (903)
T KOG1027|consen 722 QANILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPS----ATDVLNHPLFWD 772 (903)
T ss_pred hhhhhcCccceeeeccCchHHHHHHHHHhcCCCcccCCC----HHHHhCCCccCC
Confidence 4567776655433221 1228999999999999999999 999999999954
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-27 Score=255.52 Aligned_cols=257 Identities=25% Similarity=0.359 Sum_probs=181.4
Q ss_pred CCCcccccccccCCceEEEEEEEeC---CCeEEEEEEeccch-----------------------hccccccCCeEEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGV-----------------------MLNRNKTKTHVCLIT 721 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~---t~~~vAiK~l~~~~-----------------------~~~~~~~~~~~~lV~ 721 (975)
.+.|.++++||.|+|++||++.+.. .++.||+|.+.... +......++++++||
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivl 114 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVL 114 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEe
Confidence 4679999999999999999999877 78899999876432 122333788999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-CCcEEEeeccCCCccCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~-~g~vkL~DFG~a~~~~~~~~~ 800 (975)
||+++.+..++... ++...++.+++.++.||.++|.+|||||||||+|+|++. .+.-.|+|||+|.........
T Consensus 115 p~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~ 189 (418)
T KOG1167|consen 115 PYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQT 189 (418)
T ss_pred cccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhhhhh
Confidence 99999888888865 678899999999999999999999999999999999984 567899999999732110000
Q ss_pred CCCcchhh-hhccCCC-------CCcccc------------cccccccccccCCCCccchhhhcCC-CCCChhHHHHHHH
Q 002051 801 LLPTTNEK-KRRHKGQ-------QNPVFM------------AEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGI 859 (975)
Q Consensus 801 ~~~~~~~~-~~~~~~~-------~~~~~~------------~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~ 859 (975)
..... +.++... ...... ...........||++|+|||++... ..+.++||||.|+
T Consensus 190 ---~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GV 266 (418)
T KOG1167|consen 190 ---EHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGV 266 (418)
T ss_pred ---hhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccc
Confidence 00000 0000000 000000 0011122345799999999999764 4678999999999
Q ss_pred HHHHHHhCCCCCCCCCH-HHHHHHHHh--------------cC---------------------C------C--C-----
Q 002051 860 LLYEMLYGYTPFRGKTR-QKTFANILH--------------KD---------------------L------K--F----- 890 (975)
Q Consensus 860 il~ell~G~~Pf~~~~~-~~~~~~i~~--------------~~---------------------~------~--~----- 890 (975)
|+..++++..||..... ...+..+.. +. + + .
T Consensus 267 I~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~ 346 (418)
T KOG1167|consen 267 ILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTER 346 (418)
T ss_pred eeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceee
Confidence 99999999999853211 111111100 00 0 0 0
Q ss_pred -CCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCc
Q 002051 891 -PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936 (975)
Q Consensus 891 -p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~ 936 (975)
......+..+.+|+.+||..||.+|+| ++++|+||||...+-
T Consensus 347 ~~~~d~~~~~~~dlLdk~le~np~kRit----AEeALkHpFF~~~~~ 389 (418)
T KOG1167|consen 347 EIGSDVFPALLLDLLDKCLELNPQKRIT----AEDALKHPFFDEADR 389 (418)
T ss_pred ccccccccHHHHHHHHHHccCChhhccc----HHHHhcCcCCcchhh
Confidence 001123447889999999999999999 999999999996543
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-27 Score=270.08 Aligned_cols=232 Identities=25% Similarity=0.373 Sum_probs=194.8
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCC---eEEEEEEeccch-------------hccccc------------cCC
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSG---QYFAMKAMDKGV-------------MLNRNK------------TKT 715 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~---~~vAiK~l~~~~-------------~~~~~~------------~~~ 715 (975)
.+|+....+|.++||.|.||.|++++.+..| ..||||.++... +...+. ..+
T Consensus 624 kEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~ 703 (996)
T KOG0196|consen 624 KEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSK 703 (996)
T ss_pred hhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCc
Confidence 4577778899999999999999999998776 479999987542 222222 345
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
-+.||+|||++|+|..+|+.+. +.|..-++..+++.|+.|+.||-++|+|||||-..|||++.+-.+|++|||+++.+.
T Consensus 704 PvMIiTEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvle 782 (996)
T KOG0196|consen 704 PVMIITEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 782 (996)
T ss_pred eeEEEhhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecc
Confidence 6789999999999999999875 458889999999999999999999999999999999999999999999999998765
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccC--CCCccchhhhcCCCCCChhHHHHHHHHHHHHH-hCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVG--TEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFR 872 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G--t~~y~aPE~l~~~~~~~k~DIWSLG~il~ell-~G~~Pf~ 872 (975)
.++.. ...+.-| ...|.|||.+...+++.++||||+|++|||.+ +|.-||.
T Consensus 783 dd~~~--------------------------~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYW 836 (996)
T KOG0196|consen 783 DDPEA--------------------------AYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYW 836 (996)
T ss_pred cCCCc--------------------------cccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCccc
Confidence 33211 1111222 46799999999999999999999999999988 6999999
Q ss_pred CCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 873 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 873 ~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
..++++.+..|.. .+.+|.+..++..+..||..||++|-.+||+ +.||..
T Consensus 837 dmSNQdVIkaIe~-gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~----F~qiV~ 886 (996)
T KOG0196|consen 837 DMSNQDVIKAIEQ-GYRLPPPMDCPAALYQLMLDCWQKDRNRRPK----FAQIVS 886 (996)
T ss_pred ccchHHHHHHHHh-ccCCCCCCCCcHHHHHHHHHHHHHHhhcCCC----HHHHHH
Confidence 9999998877655 5788888889999999999999999999999 556543
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-26 Score=254.73 Aligned_cols=231 Identities=23% Similarity=0.331 Sum_probs=186.6
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-------------hccccc------------cCCeEEE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------MLNRNK------------TKTHVCL 719 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------~~~~~~------------~~~~~~l 719 (975)
+++.+...+.++||+|.||.|.+|... .+..||+|.++... ++.+.+ .++.+|+
T Consensus 534 EfPRs~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicm 612 (807)
T KOG1094|consen 534 EFPRSRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCM 612 (807)
T ss_pred hcchhheehhhhhcCcccceeEEEEec-CceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHH
Confidence 466677899999999999999999874 36899999987542 111111 4667899
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
|||||+.|+|.+++..+....+.......|+.||+.||+||.+.++|||||-+.|+|++.++++||+|||+++.+-..+
T Consensus 613 I~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~- 691 (807)
T KOG1094|consen 613 ITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGD- 691 (807)
T ss_pred HHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCC-
Confidence 9999999999999998744445556667799999999999999999999999999999999999999999997543221
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHH--hCCCCCCCCCHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML--YGYTPFRGKTRQ 877 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell--~G~~Pf~~~~~~ 877 (975)
........+-...|||+|.+..++++.++|+|+||+++||++ +...||...+.+
T Consensus 692 ------------------------yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e 747 (807)
T KOG1094|consen 692 ------------------------YYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE 747 (807)
T ss_pred ------------------------ceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH
Confidence 122344566788999999999999999999999999999987 578999988888
Q ss_pred HHHHHHHhcC------CCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHH
Q 002051 878 KTFANILHKD------LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 925 (975)
Q Consensus 878 ~~~~~i~~~~------~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~el 925 (975)
+...+...-. .-++.+.-++..+.++|-+||.++-.+||+ +++|
T Consensus 748 ~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPs----Fe~l 797 (807)
T KOG1094|consen 748 QVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPS----FEQL 797 (807)
T ss_pred HHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCC----HHHH
Confidence 7777654311 112334557888999999999999999999 7776
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-26 Score=256.61 Aligned_cols=176 Identities=32% Similarity=0.529 Sum_probs=155.1
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-----------------------------------hcccc
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-----------------------------------MLNRN 711 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-----------------------------------~~~~~ 711 (975)
...+|..++.||.|+||.|++|.++.+...|+||.+.|++ ++..+
T Consensus 559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF 638 (772)
T KOG1152|consen 559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF 638 (772)
T ss_pred ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence 3457999999999999999999999999999999988774 23444
Q ss_pred ccCCeEEEEEecc-CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccC
Q 002051 712 KTKTHVCLITDYC-PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 790 (975)
Q Consensus 712 ~~~~~~~lV~Ey~-~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~ 790 (975)
++++++||+||.- +|.+|+++|..+ ..++|.+++.|++|++.|+++||++||||||||-+|+.++.+|.+||+|||.
T Consensus 639 Eddd~yyl~te~hg~gIDLFd~IE~k--p~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgs 716 (772)
T KOG1152|consen 639 EDDDYYYLETEVHGEGIDLFDFIEFK--PRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGS 716 (772)
T ss_pred ecCCeeEEEecCCCCCcchhhhhhcc--CccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccc
Confidence 5889999999974 567999999886 4599999999999999999999999999999999999999999999999998
Q ss_pred CCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCC-CChhHHHHHHHHHHHHHhCCC
Q 002051 791 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYT 869 (975)
Q Consensus 791 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-~~k~DIWSLG~il~ell~G~~ 869 (975)
|.... ..+...++||..|.|||++.|.+| +..-|||+||++||-+++...
T Consensus 717 aa~~k-----------------------------sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivyken 767 (772)
T KOG1152|consen 717 AAYTK-----------------------------SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKEN 767 (772)
T ss_pred hhhhc-----------------------------CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccC
Confidence 85432 234457899999999999999887 567999999999999999999
Q ss_pred CCCC
Q 002051 870 PFRG 873 (975)
Q Consensus 870 Pf~~ 873 (975)
||.+
T Consensus 768 pyyn 771 (772)
T KOG1152|consen 768 PYYN 771 (772)
T ss_pred CCcC
Confidence 9964
|
|
| >TIGR02040 PpsR-CrtJ transcriptional regulator PpsR | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.8e-26 Score=264.54 Aligned_cols=360 Identities=13% Similarity=0.029 Sum_probs=231.8
Q ss_pred HHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCC-cEEEEEEEEecC
Q 002051 195 LSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ-SYCGRLLNYKKD 273 (975)
Q Consensus 195 ld~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~-~~~~e~~~~~kd 273 (975)
++.++|+++++|. +|+|++||.+++.++||+.+|++|+++..+.+++........+..++..+. .+..+.....++
T Consensus 2 ~~~~~d~~~~~d~---~g~i~~~n~~~~~~~g~~~~el~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 78 (442)
T TIGR02040 2 LATAADVTLLLDA---EGVVREVAANPHHPSFEQLSEWEGRRWEEIVTAESVEKFELRLSEALRTGRGAVRVELNHIDPS 78 (442)
T ss_pred CcccCcEEEEECC---CCcEEEEEECCCcccccccccCCCCcHhHhhCcchHHHHHHHHHHHhccCCCcceEeeccCCCC
Confidence 5778999999999 999999999999999999999999999888888776666666666666664 455555555666
Q ss_pred CCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHhhhcCCCCCchhhhhHHHHHHHHHHhhHHHHHHHhcCccc-c
Q 002051 274 GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRS-L 352 (975)
Q Consensus 274 G~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~~~~~~l~~r~~~~d~~~~~~~~~~~~~l~~~~~~~~~-~ 352 (975)
|..+|+.++..++.+ +. +++++.+|||++++.+.++...... +..+........+.+..++....++.. +
T Consensus 79 g~~~~~~~~~~~~~~--~~--~~~~i~rDi~~~~~~~~~l~~~~~~-----~e~~~~~l~~~e~r~~~l~e~~~~~i~~~ 149 (442)
T TIGR02040 79 SFELPMRFILVRLGA--DR--GVLALGRDLRAVAELQQQLVAAQQA-----MERDYWTLREMETRYRVVLEVSSDAVLLV 149 (442)
T ss_pred CCccCeEEEEEEeCC--CC--eEEEEecccHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhhCCceEEEE
Confidence 767777777666543 32 5688999999988876654210000 000000111122334455555554443 3
Q ss_pred cc-CCCCCcccccCCCchhhhhhccccCCCCCCCCCCCCCCCCCC---cccccccccccccccccccCcccccccccccc
Q 002051 353 SE-STNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGG---CRTSMQRISEVPEKKKQKSGRRSFMGLIGRKS 428 (975)
Q Consensus 353 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (975)
+. .+...++|..+...+|+...+++|+.....+++......... ....+. ...+. ......+..... ..+..
T Consensus 150 d~~~g~i~~~N~a~~~l~G~~~~el~g~~~~~~~~~~~~~~~~~~l~~~~~~g~-~~~~~-~~~~~~~~~~~~--~~~~~ 225 (442)
T TIGR02040 150 DMSTGRIVEANSAAAALLGGVGQSLVGRAFPQEFEGRRREELMLTLRNVRATGS-AAPVR-ILLRRSQKRLLV--VVSVF 225 (442)
T ss_pred ECCCCEEEEEcHHHHHHhCcCHHHHcCCCHHHhCCHHHHHHHHHHHHHHHhcCC-CcceE-EEEcCCCeEEEE--EEEEE
Confidence 33 466777888889999999999999988777664222110000 000000 00000 011111111111 11111
Q ss_pred cCCCCCCcccchhhhcCCCCCCCCCCCCCchhhHHHHHHHhhcCcHHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHc
Q 002051 429 QSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELT 508 (975)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~er~~~~~~l~~~~~l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~ 508 (975)
...+. . .......|++++++.+++++ +.|+.++++++++|+++|.+|+ |++||++|++++
T Consensus 226 ~~~~~-~--------------~~l~~~~dit~~~~~e~~~~--~~~~~l~e~~~d~I~v~D~~G~---I~~~N~a~~~l~ 285 (442)
T TIGR02040 226 RQDGE-S--------------LFLCQLSPAGATQPVGDELS--ENLARLYHEAPDAIVFSDADGT---IRGANEAFLELT 285 (442)
T ss_pred EeCCc-e--------------EEEEEEcccchhhhhhHHHH--HHHHHHHHhCCceEEEEcCCCc---EEehhHHHHHHh
Confidence 10000 0 00112467888877666553 2499999999999999999776 999999999999
Q ss_pred CCC-hhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCC
Q 002051 509 EYS-REEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (975)
Q Consensus 509 Gy~-~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDIT 587 (975)
||+ .++++|++...+.+++... ....+......|.....+..+.++||+.+|++++++|+.+.++ ..++++++|||
T Consensus 286 G~~~~~~l~G~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~ve~s~~~i~~~~~--~~~~~v~rDIT 362 (442)
T TIGR02040 286 DSSSLEAVRGRTLDRWLGRGGVD-LRVLLSNVRRTGQVRLYATTLTGEFGAQTEVEISAAWVDQGER--PLIVLVIRDIS 362 (442)
T ss_pred CCCChHHHcCCCHHHHhCCCccc-HHHHHHHHhhcCceEEEEEEEEcCCCCEEEEEEEEEEeccCCc--eEEEEEEecch
Confidence 997 5789999976555433221 2222333334455555677888999999999999999987554 45788999999
Q ss_pred cccccc
Q 002051 588 EHLEPL 593 (975)
Q Consensus 588 erk~~e 593 (975)
+||+++
T Consensus 363 eR~~~~ 368 (442)
T TIGR02040 363 RRLTMR 368 (442)
T ss_pred hhccCC
Confidence 999864
|
This model represents the transcriptional regulator PpsR which is strictly associated with photosynthetic proteobacteria and found in photosynthetic operons. PpsR has been reported to be a repressor. These proteins contain a Helix-Turn_Helix motif of the "fis" type (pfam02954). |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.4e-25 Score=240.45 Aligned_cols=222 Identities=24% Similarity=0.369 Sum_probs=167.0
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------hccccc-------------cCCeEEEEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------MLNRNK-------------TKTHVCLIT 721 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------~~~~~~-------------~~~~~~lV~ 721 (975)
.+..+.+.||+|.||.||++++ -|..||||++.... ++.... .-..++||+
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvT 288 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVT 288 (513)
T ss_pred heeEEEEEecCccccceeeccc--cCCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEee
Confidence 4678899999999999999999 47899999986431 111111 234789999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--------GIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~--------gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
+|-+.|+|+|||.+ .+++.....+++..++.||++||-. .|.|||||..|||+..+|.+-|+|+|+|..
T Consensus 289 dYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~ 365 (513)
T KOG2052|consen 289 DYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 365 (513)
T ss_pred ecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEE
Confidence 99999999999987 5799999999999999999999974 399999999999999999999999999966
Q ss_pred cCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCC------CChhHHHHHHHHHHHHHh-
Q 002051 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH------TSAVDWWALGILLYEMLY- 866 (975)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~------~~k~DIWSLG~il~ell~- 866 (975)
....... -....+..+||..|||||++...-- -..+||||||.++||+..
T Consensus 366 h~~~t~~-----------------------idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarR 422 (513)
T KOG2052|consen 366 HDSDTDT-----------------------IDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARR 422 (513)
T ss_pred ecccCCc-----------------------ccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 5432110 0123456799999999999965321 126999999999999985
Q ss_pred ---------CCCCCCC-----CCHHHHHHHHHhcCCCC--CCCCCCcH---HHHHHHHHhcccCccccCCC
Q 002051 867 ---------GYTPFRG-----KTRQKTFANILHKDLKF--PSSTPTSL---HAKQLMYRLLHRDPKSRLGS 918 (975)
Q Consensus 867 ---------G~~Pf~~-----~~~~~~~~~i~~~~~~~--p~~~~~s~---~~~~li~~~L~~dP~~R~t~ 918 (975)
-++||.+ ++..++..-+.-..+.. |..-.-.+ ....+|+.||..||.-|.|+
T Consensus 423 c~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltA 493 (513)
T KOG2052|consen 423 CESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTA 493 (513)
T ss_pred hhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHH
Confidence 2678864 33344444333333333 22222222 34578999999999999994
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4e-25 Score=240.48 Aligned_cols=222 Identities=24% Similarity=0.380 Sum_probs=168.8
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------ccccc----cCCeEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------LNRNK----TKTHVCLI 720 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------~~~~~----~~~~~~lV 720 (975)
....+++..||+|.||.||+|+. +++.||||++..... +...+ ....++||
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV 286 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV 286 (534)
T ss_pred CCchhhHHHhhcCccceeehhhc--cCceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence 45677889999999999999998 558999999864321 11111 24478999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---------CCeecCCCCCCEEEecCCcEEEeeccCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ---------GIIYRDLKPENVLLQGNGHVSLTDFDLS 791 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~---------gIiHrDIKp~NILl~~~g~vkL~DFG~a 791 (975)
++|.+.|+|.+||+. ..++......|+..|+.||+|||+- .|+|||||..|||+.+++.+.|+|||+|
T Consensus 287 t~fh~kGsL~dyL~~---ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA 363 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLKA---NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA 363 (534)
T ss_pred eeeccCCcHHHHHHh---ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence 999999999999987 5799999999999999999999984 4999999999999999999999999999
Q ss_pred CccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC-CC-----ChhHHHHHHHHHHHHH
Q 002051 792 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HT-----SAVDWWALGILLYEML 865 (975)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~~-----~k~DIWSLG~il~ell 865 (975)
..+.... ........+||..|||||++-+.. +. .+.||||+|.+||||+
T Consensus 364 l~~~p~~-------------------------~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~ 418 (534)
T KOG3653|consen 364 LRLEPGK-------------------------PQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIA 418 (534)
T ss_pred EEecCCC-------------------------CCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHH
Confidence 7765211 112333479999999999997642 11 2699999999999999
Q ss_pred hCC------------CCCC-----CCCHHHHHHHHHhcCC--CCCCC---CCCcHHHHHHHHHhcccCccccCCCh
Q 002051 866 YGY------------TPFR-----GKTRQKTFANILHKDL--KFPSS---TPTSLHAKQLMYRLLHRDPKSRLGSH 919 (975)
Q Consensus 866 ~G~------------~Pf~-----~~~~~~~~~~i~~~~~--~~p~~---~~~s~~~~~li~~~L~~dP~~R~t~~ 919 (975)
+.- .||. ..+..++...+++++. .+|.. -.--..+++.+..||..||+-|+|+.
T Consensus 419 SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~ 494 (534)
T KOG3653|consen 419 SRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAG 494 (534)
T ss_pred hhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhH
Confidence 742 2332 2334445555555433 23322 11234578999999999999999954
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-25 Score=228.61 Aligned_cols=215 Identities=24% Similarity=0.363 Sum_probs=165.8
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc-------------------------cccccCCeEEEEEe
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-------------------------NRNKTKTHVCLITD 722 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~-------------------------~~~~~~~~~~lV~E 722 (975)
.+.|.+.+.||.|.||.+.+|.|+.+++.+++|.+.+.... -.++..+.++++||
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE 102 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE 102 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence 45799999999999999999999999999999988765311 11225678899999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC--CcEEEeeccCCCccCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN--GHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~--g~vkL~DFG~a~~~~~~~~~ 800 (975)
|++.|+|..-+.. ..+.+...+.++.|++.||.|||++++||||||.+||||-.. ..|||||||.++..+..-
T Consensus 103 ~aP~gdL~snv~~---~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV-- 177 (378)
T KOG1345|consen 103 FAPRGDLRSNVEA---AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTV-- 177 (378)
T ss_pred cCccchhhhhcCc---ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCcee--
Confidence 9999999887754 458899999999999999999999999999999999999643 379999999986543110
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-----CCCChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-----GHTSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-----~~~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
...--+..|.+||.+... ...+..|||.||+++|.+++|.+||....
T Consensus 178 ----------------------------~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~ 229 (378)
T KOG1345|consen 178 ----------------------------KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKAS 229 (378)
T ss_pred ----------------------------hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhh
Confidence 111235678899876432 24568999999999999999999997432
Q ss_pred HHH----HHHHHH-hcCCCCCC-CCCCcHHHHHHHHHhcccCcccc
Q 002051 876 RQK----TFANIL-HKDLKFPS-STPTSLHAKQLMYRLLHRDPKSR 915 (975)
Q Consensus 876 ~~~----~~~~i~-~~~~~~p~-~~~~s~~~~~li~~~L~~dP~~R 915 (975)
..+ .+.+.. +.....|. ...+++.+..+.++-|..+|++|
T Consensus 230 ~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~dr 275 (378)
T KOG1345|consen 230 IMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDR 275 (378)
T ss_pred ccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCccccc
Confidence 211 111122 22233333 35578899999999999999999
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3e-25 Score=285.53 Aligned_cols=217 Identities=21% Similarity=0.332 Sum_probs=163.0
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------ccccccCCeEEEEEeccCCCCH
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------LNRNKTKTHVCLITDYCPGGEL 729 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------~~~~~~~~~~~lV~Ey~~ggsL 729 (975)
.|...+.||+|+||.||+|.++.++..||+|.+..... ..........|+|||||++|+|
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L 770 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNL 770 (968)
T ss_pred hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcH
Confidence 56777899999999999999999999999998864321 1112256678999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcch
Q 002051 730 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH---CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 806 (975)
Q Consensus 730 ~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH---~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 806 (975)
.+++.. +++..+..++.||+.||+||| +.+|+||||||+||+++.++..++. ||.+....
T Consensus 771 ~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~----------- 833 (968)
T PLN00113 771 SEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLC----------- 833 (968)
T ss_pred HHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccc-----------
Confidence 999953 788899999999999999999 6699999999999999988887775 65542211
Q ss_pred hhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCH--HHHH--HH
Q 002051 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR--QKTF--AN 882 (975)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~--~~~~--~~ 882 (975)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .... ..
T Consensus 834 --------------------~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~ 893 (968)
T PLN00113 834 --------------------TDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWAR 893 (968)
T ss_pred --------------------cCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHH
Confidence 01123678999999999999999999999999999999999999853211 0111 11
Q ss_pred HHh----------cCCC--CCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 883 ILH----------KDLK--FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 883 i~~----------~~~~--~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
... .... .+.......++.+++.+||+.||++||| +.|+++
T Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt----~~evl~ 946 (968)
T PLN00113 894 YCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPC----ANDVLK 946 (968)
T ss_pred HhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcC----HHHHHH
Confidence 100 0000 0001111235678999999999999999 555543
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.8e-25 Score=249.52 Aligned_cols=229 Identities=22% Similarity=0.301 Sum_probs=182.2
Q ss_pred CcccccccccCCceEEEEEEEeCCC----eEEEEEEeccchhcccc------------cc------------CCeEEEEE
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSG----QYFAMKAMDKGVMLNRN------------KT------------KTHVCLIT 721 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~----~~vAiK~l~~~~~~~~~------------~~------------~~~~~lV~ 721 (975)
..+..++||+|+||+||++.+...| -+||||++......... .+ ...+.||+
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvt 776 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVT 776 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHH
Confidence 3566789999999999999986554 47899987654211111 11 22356899
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
+|+++|+|.++++.+ ...+.......|..||++||.|||.++++||||-..|+|+.....+|+.|||+++.+.......
T Consensus 777 q~mP~G~LlDyvr~h-r~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey 855 (1177)
T KOG1025|consen 777 QLMPLGCLLDYVREH-RDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEY 855 (1177)
T ss_pred HhcccchHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccc
Confidence 999999999999875 4568889999999999999999999999999999999999999999999999998765322110
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTF 880 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~ 880 (975)
......-.+.|||-|.++...|+.++||||+|+++||++| |..||.+....++
T Consensus 856 -------------------------~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI- 909 (1177)
T KOG1025|consen 856 -------------------------SAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEI- 909 (1177)
T ss_pred -------------------------cccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHh-
Confidence 0111223567999999999999999999999999999996 9999999876654
Q ss_pred HHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHH
Q 002051 881 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 925 (975)
Q Consensus 881 ~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~el 925 (975)
..+++....++.+..++.++.-+|.+||..|+..||++++.+.++
T Consensus 910 ~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~f 954 (1177)
T KOG1025|consen 910 PDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEF 954 (1177)
T ss_pred hHHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHH
Confidence 455555555777788899999999999999999999965544443
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.6e-25 Score=260.65 Aligned_cols=262 Identities=34% Similarity=0.582 Sum_probs=200.5
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhcc-ccccCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHH
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-RNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVR 747 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~-~~~~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~ 747 (975)
.+|..++.|..|+||-||+++|+.+.+.||+|+-++..++. .....++.+.| |+-...++.. +.++.+.
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~kiNkq~lilRnilt~a~npfvv------gDc~tllk~~--g~lPvdm-- 152 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNLILRNILTFAGNPFVV------GDCATLLKNI--GPLPVDM-- 152 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhcccccchhhhccccccCCccee------chhhhhcccC--CCCcchh--
Confidence 47999999999999999999999999999996555544433 22233333444 5666666553 4455433
Q ss_pred HHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccc
Q 002051 748 FYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRA 827 (975)
Q Consensus 748 ~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 827 (975)
+.+++|||+.||+|||+||+|.||+.-|++|+.|||+++...-....... ...+++ ....-.
T Consensus 153 ------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~-eg~I~k-----------~t~Ef~ 214 (1205)
T KOG0606|consen 153 ------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLK-EGHIEK-----------DTHEFQ 214 (1205)
T ss_pred ------hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhh-hcchHH-----------HHHHhh
Confidence 77999999999999999999999999999999999998754321110000 000000 001112
Q ss_pred cccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCC-CCCcHHHHHHHHH
Q 002051 828 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSS-TPTSLHAKQLMYR 906 (975)
Q Consensus 828 ~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~-~~~s~~~~~li~~ 906 (975)
....||||.|.|||++....|+..+|.|++|+|+|+.+.|..||.+.++++++..++...+.+|+. ...+++++++|.+
T Consensus 215 dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~ 294 (1205)
T KOG0606|consen 215 DKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQ 294 (1205)
T ss_pred hccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHH
Confidence 345699999999999999999999999999999999999999999999999999999988888876 4478899999999
Q ss_pred hcccCccccCCChhhHHHHHcCCCccCCCcchhhccCCCCCCCCCcccCcccccc
Q 002051 907 LLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDTEKEYK 961 (975)
Q Consensus 907 ~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 961 (975)
+|+.+|..|... ..+-++.+|+||+.+||.-+-+.-.+. .|+++.+-+-.|.
T Consensus 295 LL~qnp~~Rlgt-~ga~evk~h~ff~~LDw~~llRqkaef--vpql~~eddtsyf 346 (1205)
T KOG0606|consen 295 LLRQNPLCRLGT-GGALEVKQHGFFQLLDWKSLLRQKAEF--VPQLESEDDTSYF 346 (1205)
T ss_pred HHHhChHhhccc-chhhhhhhccceeecccchhhhhhccc--cccccccccchhh
Confidence 999999999874 368899999999999999665544553 4666555444443
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.8e-24 Score=258.16 Aligned_cols=235 Identities=25% Similarity=0.345 Sum_probs=184.4
Q ss_pred cccccCCCcccccccccCCceEEEEEEEeC-------CCeEEEEEEeccchh--------------------------cc
Q 002051 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVM--------------------------LN 709 (975)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~-------t~~~vAiK~l~~~~~--------------------------~~ 709 (975)
.+.++.++..+.+.||.|.||.|+++.... ....||||.++.... +.
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG 369 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG 369 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence 456677777888899999999999997542 145799998764421 11
Q ss_pred ccccCCeEEEEEeccCCCCHHHHHhhCC------C--------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 002051 710 RNKTKTHVCLITDYCPGGELFLLLDRQP------T--------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 775 (975)
Q Consensus 710 ~~~~~~~~~lV~Ey~~ggsL~~~l~~~~------~--------~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NI 775 (975)
.......+++|+|||..|+|..++.... . ..++......++.||+.|++||++.++|||||-..||
T Consensus 370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNV 449 (609)
T KOG0200|consen 370 ACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNV 449 (609)
T ss_pred eeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhE
Confidence 1124678999999999999999998753 0 1388999999999999999999999999999999999
Q ss_pred EEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCccccccccccccccc--CCCCccchhhhcCCCCCChhH
Q 002051 776 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFV--GTEEYIAPEIIAGAGHTSAVD 853 (975)
Q Consensus 776 Ll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--Gt~~y~aPE~l~~~~~~~k~D 853 (975)
|+..+..+|++|||+|+........ . ..... -...|||||.+....|+.++|
T Consensus 450 Li~~~~~~kIaDFGlar~~~~~~~y-------------------------~-~~~~~~~LP~kWmApEsl~~~~ft~kSD 503 (609)
T KOG0200|consen 450 LITKNKVIKIADFGLARDHYNKDYY-------------------------R-TKSSAGTLPVKWMAPESLFDRVFTSKSD 503 (609)
T ss_pred EecCCCEEEEccccceeccCCCCce-------------------------E-ecCCCCccceeecCHHHhccCcccccch
Confidence 9999999999999999753321110 0 00111 234599999999999999999
Q ss_pred HHHHHHHHHHHHh-CCCCCCCCC-HHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHH
Q 002051 854 WWALGILLYEMLY-GYTPFRGKT-RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 924 (975)
Q Consensus 854 IWSLG~il~ell~-G~~Pf~~~~-~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~e 924 (975)
|||+|++|||+++ |..||.+.. ..+.+ ..++.......+..++.++.++|+.||+.+|++||++.+..+.
T Consensus 504 VWSfGI~L~EifsLG~~PYp~~~~~~~l~-~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~ 575 (609)
T KOG0200|consen 504 VWSFGILLWEIFTLGGTPYPGIPPTEELL-EFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEF 575 (609)
T ss_pred hhHHHHHHHHHhhCCCCCCCCCCcHHHHH-HHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 9999999999996 999999865 44554 4566656666666779999999999999999999995443333
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-24 Score=273.06 Aligned_cols=212 Identities=17% Similarity=0.217 Sum_probs=146.1
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 714 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 714 ~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
...++++|||+ +++|.+++... ...+++..++.+++||+.||.|||++||+||||||+||||+..|.+|++|||++..
T Consensus 52 ~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~ 129 (793)
T PLN00181 52 DDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSD 129 (793)
T ss_pred cchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCc
Confidence 45688899998 77999999753 35699999999999999999999999999999999999998877888888777654
Q ss_pred cCCCCCCCCCcchhhhhccC-CCC-------CcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHH
Q 002051 794 TSCKPQLLLPTTNEKKRRHK-GQQ-------NPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 865 (975)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell 865 (975)
.............-+..+.. ... ...............+||+.|||||++.+..|+.++|||||||+||||+
T Consensus 130 ~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl 209 (793)
T PLN00181 130 SGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELF 209 (793)
T ss_pred ccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHh
Confidence 32111000000000000000 000 0000000001112357899999999999999999999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 866 YGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 866 ~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
+|.+||.... ..+..+.....+ +......+...+++.+||+++|.+||+ +.|+|+||||...
T Consensus 210 ~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~L~~~P~~Rps----~~eil~h~~~~~~ 271 (793)
T PLN00181 210 CPVSSREEKS--RTMSSLRHRVLP-PQILLNWPKEASFCLWLLHPEPSCRPS----MSELLQSEFINEP 271 (793)
T ss_pred hCCCchhhHH--HHHHHHHHhhcC-hhhhhcCHHHHHHHHHhCCCChhhCcC----hHHHhhchhhhhh
Confidence 9999875422 222222222111 111123456779999999999999999 9999999999764
|
|
| >PRK13560 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.4e-24 Score=268.98 Aligned_cols=379 Identities=10% Similarity=0.035 Sum_probs=263.6
Q ss_pred ccccccccCcchHHHH-HHHHHhccCcEEEEeCCCCCCc----eEeccHHHHHHhCCChhhhcCCC--CCCCCCCCCCHH
Q 002051 176 DEGGKEKGLPRVSDIV-KDALSTFQQTFVVSDATKPDYP----IMYASAGFFKMTGYTSKEVVGRN--CRFLQGAGTDPE 248 (975)
Q Consensus 176 ~~~~~e~~L~~~~~~l-~~ild~~~d~i~i~D~~~~~G~----I~~~N~a~~~l~Gys~eEliG~~--~~~l~~~~~~~~ 248 (975)
.++..+++|+++.+.+ +.+++++|+++++++. +|. +.|++++...++||...++++.. +..+++|++...
T Consensus 54 ~r~~~~~~l~~~~e~~~r~l~~~~p~~i~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~d~~~ 130 (807)
T PRK13560 54 ARAIAEAEAQDCREQCERNLKANIPGGMFLFAL---DGDGTFSFPSLLDANGELAAIAKHDLMADKGLLAMLIGGDDGDF 130 (807)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEE---cCccccccceeeccchhHHHhcCcccCCccchhhhhcCCCcchh
Confidence 3456777888888888 9999999999999987 544 33488888899999888877643 335667776554
Q ss_pred HH-------HHHHHHHHcCCcEEEEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHhhhcCCCCCc
Q 002051 249 DV-------AKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLP 321 (975)
Q Consensus 249 ~~-------~~l~~~l~~g~~~~~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~~~~~~l~ 321 (975)
.. +.+..++..+.....+++.+++||+ |+++...|.++.+|.+ .+.|+++|||++|++|++|+.+
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~dg~--~~~~~~~~~~~~~g~~-~~~g~~~DIT~rk~ae~~l~~~----- 202 (807)
T PRK13560 131 FFANPFRSAETIAMALQSDDWQEEEGHFRCGDGR--FIDCCLRFERHAHADD-QVDGFAEDITERKRAEERIDEA----- 202 (807)
T ss_pred hhhChhhHHHHHHHHhccCcccceEEEEEeCCcc--EEEEEeeeeecCCCce-EEEEEEEccchHHHHHHHHHHH-----
Confidence 43 3344445555666778888999996 6677788889888886 6899999999999999887631
Q ss_pred hhhhhHHHHHHHHHHhhHHHHHHHhcC-ccccccCCCCCcccccCCCchhhhhhccccCCCCCCCCCCCCCCCCCC--cc
Q 002051 322 ESLIRYDARQKEMATSSVTELVQAMKK-PRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGG--CR 398 (975)
Q Consensus 322 ~r~~~~d~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 398 (975)
.+.+..++..... ...++.++...++|......+|+...+++|+...+..+.......... ..
T Consensus 203 --------------~~~l~~l~e~~~~~i~~~d~~g~i~~~N~~~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~ 268 (807)
T PRK13560 203 --------------LHFLQQLLDNIADPAFWKDEDAKVFGCNDAACLACGFRREEIIGMSIHDFAPAQPADDYQEADAAK 268 (807)
T ss_pred --------------HHHHHHHHhhCCCeEEEEcCCCCEEEEhHHHHHHhCCCHHHHcCCcchhcCCcchhHHHHHHHHHH
Confidence 1223334444432 344566778888999999999999999999998887665322111000 00
Q ss_pred cccccccccccccccccCcccccccccccccCCCCCCcccchhhhcCCCCCCCCCCCCCchhhHHHHHHHhhc-CcHHHH
Q 002051 399 TSMQRISEVPEKKKQKSGRRSFMGLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKG-IDLATT 477 (975)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~er~~~~~~l~~~-~~l~~i 477 (975)
........+......++|...|..+..+.... ....+.+.+..+..+|||+|++.+++++++ ..|+.+
T Consensus 269 ~~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~-----------~~~~g~~~g~~~~~~DITerk~~e~~L~~se~~l~~l 337 (807)
T PRK13560 269 FDADGSQIIEAEFQNKDGRTRPVDVIFNHAEF-----------DDKENHCAGLVGAITDISGRRAAERELLEKEDMLRAI 337 (807)
T ss_pred hccCCceEEEEEEEcCCCCEEEEEEEecceEE-----------EcCCCCEEEEEEEEEechHHHHHHHHHHHHHHHHHHH
Confidence 00011122333344566666544332221111 111122223334458999999999999876 668999
Q ss_pred HHhccCcEEEEcCCCCCCCeeec-CHHHHHHcCCChhhhcCCCCCCcCCCCCCHH---------------H--HHHHHHH
Q 002051 478 LERIEKNFVITDPRLPDNPIIFA-SDSFLELTEYSREEILGRNCRFLQGPETDPA---------------T--VRKIRAA 539 (975)
Q Consensus 478 ~e~~~d~i~i~D~~g~dg~I~~v-N~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~---------------~--~~~~~~~ 539 (975)
+++++++++++|.+|. ++++ |+++++++||+.+|++|++...+.++..... . ...+...
T Consensus 338 ~~~~~~~i~~~d~~g~---i~~~nn~~~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (807)
T PRK13560 338 IEAAPIAAIGLDADGN---ICFVNNNAAERMLGWSAAEVMGKPLPGMDPELNEEFWCGDFQEWYPDGRPMAFDACPMAKT 414 (807)
T ss_pred HHhCcccEEEEcCCCC---EEEecCHHHHHHhCCCHHHHcCCCccccChhhhhhhhhchhhhcCCcCCcchhhhhhHHHH
Confidence 9999999999999766 9987 6788889999999999998655433221111 0 0112334
Q ss_pred HHcCCcEE-EEEEEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccccc
Q 002051 540 IDNQTDVT-VQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (975)
Q Consensus 540 l~~g~~~~-~e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~e 593 (975)
+..+..+. .++...+++|..+|+.+...|++|.+|.+++++++++|||+||+++
T Consensus 415 ~~~~~~~~~~e~~~~~~~g~~~~~~~~~~p~~d~~g~~~~~~~~~~DITerk~~E 469 (807)
T PRK13560 415 IKGGKIFDGQEVLIEREDDGPADCSAYAEPLHDADGNIIGAIALLVDITERKQVE 469 (807)
T ss_pred HhcCCcccCceEEEEcCCCCeEEEEEEEeeeECCCCCEEEEEEEeehhhhHHHHH
Confidence 55555543 4788889999999999999999999999999999999999999844
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.9e-24 Score=218.09 Aligned_cols=161 Identities=24% Similarity=0.247 Sum_probs=129.3
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcch
Q 002051 727 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 806 (975)
Q Consensus 727 gsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 806 (975)
|+|.+++... ...+++..++.++.||+.||.|||+++ ||+|||++.++.+|+ ||++.....
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~---------- 61 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTP---------- 61 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecc----------
Confidence 6899999764 346999999999999999999999998 999999999999999 998854321
Q ss_pred hhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHh
Q 002051 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ-KTFANILH 885 (975)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~-~~~~~i~~ 885 (975)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||...... ..+..+..
T Consensus 62 ----------------------~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~ 119 (176)
T smart00750 62 ----------------------EQSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLN 119 (176)
T ss_pred ----------------------ccCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHH
Confidence 1125889999999999999999999999999999999999999765442 33333333
Q ss_pred cCCCC-----CCCCCCcH--HHHHHHHHhcccCccccCCChhhHHHHHcCCCcc
Q 002051 886 KDLKF-----PSSTPTSL--HAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932 (975)
Q Consensus 886 ~~~~~-----p~~~~~s~--~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~ 932 (975)
..... +.....+. .+.+||.+||..||.+||+ +.+++.|+|+.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~----~~~ll~~~~~~ 169 (176)
T smart00750 120 GMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREA----ANHYLAHCRAL 169 (176)
T ss_pred HhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccC----HHHHHHHHHHH
Confidence 22211 11112233 6899999999999999999 99999999875
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.4e-22 Score=207.51 Aligned_cols=188 Identities=39% Similarity=0.641 Sum_probs=158.2
Q ss_pred cccCCceEEEEEEEeCCCeEEEEEEeccchhc-------------------------cccccCCeEEEEEeccCCCCHHH
Q 002051 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-------------------------NRNKTKTHVCLITDYCPGGELFL 731 (975)
Q Consensus 677 LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~-------------------------~~~~~~~~~~lV~Ey~~ggsL~~ 731 (975)
||.|++|.||++.+..+++.+++|++...... .........+++|||+.|++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 68999999999999888999999998765321 01113467899999999899999
Q ss_pred HHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-CCcEEEeeccCCCccCCCCCCCCCcchhhhh
Q 002051 732 LLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKR 810 (975)
Q Consensus 732 ~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~-~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~ 810 (975)
++.... ..++...+..++.+++.+|.+||++|++|+||+|.||+++. ++.++|+|||.+........
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~----------- 148 (215)
T cd00180 81 LLKENE-GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS----------- 148 (215)
T ss_pred HHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-----------
Confidence 997642 36899999999999999999999999999999999999999 89999999998855431100
Q ss_pred ccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC
Q 002051 811 RHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 889 (975)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~ 889 (975)
......+...|++||.+... .++.+.|+|++|+++++|
T Consensus 149 ----------------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------- 187 (215)
T cd00180 149 ----------------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------- 187 (215)
T ss_pred ----------------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------
Confidence 11234578889999999877 788899999999999999
Q ss_pred CCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCC
Q 002051 890 FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 929 (975)
Q Consensus 890 ~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp 929 (975)
..+.+++.+||+.+|++||+ +.++++|+
T Consensus 188 --------~~~~~~l~~~l~~~p~~R~~----~~~l~~~~ 215 (215)
T cd00180 188 --------PELKDLIRKMLQKDPEKRPS----AKEILEHL 215 (215)
T ss_pred --------HHHHHHHHHHhhCCcccCcC----HHHHhhCC
Confidence 57889999999999999999 99999875
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.8e-23 Score=203.89 Aligned_cols=255 Identities=20% Similarity=0.273 Sum_probs=191.7
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-----------------------hccccccCCeEEEE
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-----------------------MLNRNKTKTHVCLI 720 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-----------------------~~~~~~~~~~~~lV 720 (975)
..+..+.|+++++||.|+||.+|++....+|..||||+-+... +.....+..+-.+|
T Consensus 10 ~~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlV 89 (341)
T KOG1163|consen 10 ELIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLV 89 (341)
T ss_pred hheeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceee
Confidence 3467889999999999999999999999999999999876542 11222367788999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC---CcEEEeeccCCCccCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~---g~vkL~DFG~a~~~~~~ 797 (975)
|+++ |++|.+++.-. ...++...+..++-|++.-++|+|.+++|||||||+|+|+.-+ ..+.|+|||+|+.+-..
T Consensus 90 MdLL-GPsLEdLfnfC-~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~ 167 (341)
T KOG1163|consen 90 MDLL-GPSLEDLFNFC-SRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDI 167 (341)
T ss_pred eecc-CccHHHHHHHH-hhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhccc
Confidence 9999 99999988643 3468999999999999999999999999999999999999743 46899999999876422
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCC---
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK--- 874 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~--- 874 (975)
... .+-+........||..|.+--...+...+...|+-|+|.+|.++-.|..||.+.
T Consensus 168 ~t~--------------------~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~ 227 (341)
T KOG1163|consen 168 RTR--------------------QHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAA 227 (341)
T ss_pred ccc--------------------ccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchh
Confidence 110 122334455678999999998888888889999999999999999999999884
Q ss_pred CHHHHHHHHHhcCCCCCCC---CCCcHHHHHHHHHhcccCccccCCChhhHHHH-------HcCCCccCCCcchhhc
Q 002051 875 TRQKTFANILHKDLKFPSS---TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI-------KKHPFFKGVNWALVRC 941 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~~p~~---~~~s~~~~~li~~~L~~dP~~R~t~~~~~~el-------L~Hp~f~~~~~~~~~~ 941 (975)
+...-+++|.......|.. ...+.++...|.-|-..--++-|... -+.++ |.|.+=--.||.-+..
T Consensus 228 tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~-ylrqlFriLfr~ln~~~d~iyDW~~lkq 303 (341)
T KOG1163|consen 228 TKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYM-YLRQLFRILFRTLNHQYDYIYDWTMLKQ 303 (341)
T ss_pred hHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHH-HHHHHHHHHHhhccccCCeEeeHHHHHH
Confidence 4445566676665554432 34566777777777555555555521 12222 2444434467876644
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.7e-24 Score=241.31 Aligned_cols=244 Identities=41% Similarity=0.686 Sum_probs=201.9
Q ss_pred ccccCCceEEEEEEEe---CCCeEEEEEEeccchhcc---------------------------ccccCCeEEEEEeccC
Q 002051 676 PLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLN---------------------------RNKTKTHVCLITDYCP 725 (975)
Q Consensus 676 ~LG~G~fG~Vy~a~~~---~t~~~vAiK~l~~~~~~~---------------------------~~~~~~~~~lV~Ey~~ 725 (975)
.+|.|+||.|++++-. ..|+.||+|++++..... .++.+..+|++++|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 4799999999987643 457889999887653211 1125667789999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcc
Q 002051 726 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 805 (975)
Q Consensus 726 ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 805 (975)
||+|+..+.+. ..+.+...+.+...++.+++++|+.+|+|||+|++||+++.+|++++.|||+++....
T Consensus 81 gg~lft~l~~~--~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~--------- 149 (612)
T KOG0603|consen 81 GGDLFTRLSKE--VMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVK--------- 149 (612)
T ss_pred cchhhhccccC--CchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHh---------
Confidence 99999888764 5588889999999999999999999999999999999999999999999999865321
Q ss_pred hhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q 002051 806 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH 885 (975)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~ 885 (975)
....|||..|||||+++ ++...+|.||+|+++++|++|..||.+ +...+|..
T Consensus 150 ----------------------~~~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~ 201 (612)
T KOG0603|consen 150 ----------------------EKIACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILK 201 (612)
T ss_pred ----------------------hhhcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhh
Confidence 11128999999999998 567889999999999999999999987 77778887
Q ss_pred cCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhccCCCCCCCCCcccCccccc
Q 002051 886 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDTEKEY 960 (975)
Q Consensus 886 ~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 960 (975)
..+..|.. .+..+.+++..++..+|.+|.... ..+.|+++|+||..++|..+.....+..+.|....+.+..+
T Consensus 202 ~~~~~p~~--l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~l~~r~~~~~fkp~~~~e~~~~~ 275 (612)
T KOG0603|consen 202 AELEMPRE--LSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNELEARSRPPPFKPGSITERDVAQ 275 (612)
T ss_pred hccCCchh--hhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHhhHhhcCCCCCCCCcccchhhhhh
Confidence 66665554 688999999999999999999854 47899999999999999988777777777777666544433
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-21 Score=206.95 Aligned_cols=189 Identities=37% Similarity=0.612 Sum_probs=151.9
Q ss_pred cccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc-------------------------cccccCCeEEEEEeccC
Q 002051 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-------------------------NRNKTKTHVCLITDYCP 725 (975)
Q Consensus 671 y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~-------------------------~~~~~~~~~~lV~Ey~~ 725 (975)
|.+.+.||.|++|.||++.+..+++.+|+|.+...... .........++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 66788999999999999999988999999998754210 11114467899999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcc
Q 002051 726 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 805 (975)
Q Consensus 726 ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 805 (975)
+++|.+++..... .+++..+..++.+++.+|.|||+++++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~------- 152 (225)
T smart00221 81 GGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDL------- 152 (225)
T ss_pred CCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc-------
Confidence 9999999986421 18899999999999999999999999999999999999999999999999886543111
Q ss_pred hhhhhccCCCCCcccccccccccccccCCCCccchhhh-cCCCCCChhHHHHHHHHHHHHHhCCCCCCC-CCHH-HHHHH
Q 002051 806 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII-AGAGHTSAVDWWALGILLYEMLYGYTPFRG-KTRQ-KTFAN 882 (975)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l-~~~~~~~k~DIWSLG~il~ell~G~~Pf~~-~~~~-~~~~~ 882 (975)
........++..|++||.+ ....++.++|+|+||+++++|++|+.||.. .+.. .+...
T Consensus 153 -------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~ 213 (225)
T smart00221 153 -------------------AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDV 213 (225)
T ss_pred -------------------cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHH
Confidence 0012234678889999998 666778899999999999999999999977 4444 44444
Q ss_pred HHhc
Q 002051 883 ILHK 886 (975)
Q Consensus 883 i~~~ 886 (975)
+..+
T Consensus 214 ~~~~ 217 (225)
T smart00221 214 WSFG 217 (225)
T ss_pred HhcC
Confidence 4444
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >PRK11359 cyclic-di-GMP phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.2e-21 Score=241.69 Aligned_cols=241 Identities=20% Similarity=0.309 Sum_probs=198.5
Q ss_pred chHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCC----
Q 002051 186 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ---- 261 (975)
Q Consensus 186 ~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~---- 261 (975)
.....+..+++.++++++++|. +|+|+++|++|++++||+.+|++|+++..+.+++........+......+.
T Consensus 9 ~~~~~~~~~le~~~~~i~~~d~---~g~i~~~N~~~~~l~G~s~eeliG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (799)
T PRK11359 9 AADGIFFPALEQNMMGAVLINE---NDEVLFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVE 85 (799)
T ss_pred hhhhhHHHHHHhhcCcEEEEcC---CCeEEEEcHHHHHHhCCCHHHHcCCCHHHhcCccccccchHHHhhhhccCCcccc
Confidence 3345677889999999999999 999999999999999999999999998888887766555555555554443
Q ss_pred cEEEEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHhhhcCCCCCchhhhhHHHHHHHHHHhhHHH
Q 002051 262 SYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTE 341 (975)
Q Consensus 262 ~~~~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~~~~~~l~~r~~~~d~~~~~~~~~~~~~ 341 (975)
.+..+++.+++||+.+|+.+++.++. .+|. .+++++.+|||++++.+++++.
T Consensus 86 ~~~~e~~~~~~dG~~~~v~~~~~~~~-~~g~-~~~~~~~~DiT~~~~~~~~~~~-------------------------- 137 (799)
T PRK11359 86 GMSRELQLEKKDGSKIWTRFALSKVS-AEGK-VYYLALVRDASVEMAQKEQTRQ-------------------------- 137 (799)
T ss_pred ccceeeEEecCCcCEEEEEEEeeeec-cCCc-eEEEEEEeeccchhhhHHHHHH--------------------------
Confidence 23457788899999999999998873 4455 4678999999987665544220
Q ss_pred HHHHhcCccccccCCCCCcccccCCCchhhhhhccccCCCCCCCCCCCCCCCCCCcccccccccccccccccccCccccc
Q 002051 342 LVQAMKKPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFM 421 (975)
Q Consensus 342 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (975)
T Consensus 138 -------------------------------------------------------------------------------- 137 (799)
T PRK11359 138 -------------------------------------------------------------------------------- 137 (799)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccCCCCCCcccchhhhcCCCCCCCCCCCCCchhhHHHHHHHhhcCcHHHHHHhccCcEEEEcCCCCCCCeeecC
Q 002051 422 GLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFAS 501 (975)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~er~~~~~~l~~~~~l~~i~e~~~d~i~i~D~~g~dg~I~~vN 501 (975)
+..++++++++++++|.+|+ ++++|
T Consensus 138 ----------------------------------------------------~~~~~~~~~~~i~~~d~~g~---i~~~N 162 (799)
T PRK11359 138 ----------------------------------------------------LIIAVDHLDRPVIVLDPERR---IVQCN 162 (799)
T ss_pred ----------------------------------------------------HHHHHhcCCCcEEEEcCCCc---EEEEC
Confidence 55678999999999999766 99999
Q ss_pred HHHHHHcCCChhhhcCCCCCCcC-CCCCCHHHHHHHHHHHHcCCcEEEEEEEEccCCcEEEEEEEEeeeecCCCCEEEEE
Q 002051 502 DSFLELTEYSREEILGRNCRFLQ-GPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFI 580 (975)
Q Consensus 502 ~a~~~l~Gy~~eEllG~~~~~l~-~~~~~~~~~~~~~~~l~~g~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v 580 (975)
+++++++||+.++++|++...+. ++.........+...+..+..+..+++..+++|..+|+.++..|+.|.+|.+.+++
T Consensus 163 ~~~~~l~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~v~d~~g~~~~~~ 242 (799)
T PRK11359 163 RAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 (799)
T ss_pred hhhHhhhCCCHHHHCCCChHHhcCCCCCcHHHHHHHHHhhccCCCCcceeEEeCCCCCEEEEEeeeeeeecCCCceeEEE
Confidence 99999999999999999876554 45555556666777777777788889999999999999999999999999999999
Q ss_pred EEeecCCccccc
Q 002051 581 GVQLDGSEHLEP 592 (975)
Q Consensus 581 ~i~rDITerk~~ 592 (975)
++.+|||++|++
T Consensus 243 ~~~~DITerk~~ 254 (799)
T PRK11359 243 MTFSDITEERQI 254 (799)
T ss_pred EEeehhhhHHHH
Confidence 999999999874
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-22 Score=239.85 Aligned_cols=238 Identities=24% Similarity=0.413 Sum_probs=179.6
Q ss_pred ccccccccCCceEEEEEEEeCCCeEEEEEEecc----ch----hcc----c------------------cccCCeEEEEE
Q 002051 672 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDK----GV----MLN----R------------------NKTKTHVCLIT 721 (975)
Q Consensus 672 ~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~----~~----~~~----~------------------~~~~~~~~lV~ 721 (975)
.....+|.|++|.|+.+......+.++.|.+.. .. ... . .......+-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 566789999999998888877766666665431 10 000 0 00122223349
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
|||++ +|+.++... +.+....+..+++|++.||.|||+.||.||||||+|+++..+|.+||+|||.+..+....
T Consensus 401 E~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~--- 474 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPW--- 474 (601)
T ss_pred hcccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCc---
Confidence 99999 999999874 468899999999999999999999999999999999999999999999999985543211
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCC-hhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS-AVDWWALGILLYEMLYGYTPFRGKTRQKTF 880 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~-k~DIWSLG~il~ell~G~~Pf~~~~~~~~~ 880 (975)
..........+|+..|+|||++.+..|++ ..||||.|++++.|++|+.||......+..
T Consensus 475 --------------------e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~ 534 (601)
T KOG0590|consen 475 --------------------EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNS 534 (601)
T ss_pred --------------------chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccc
Confidence 11123445679999999999999999976 799999999999999999999775554332
Q ss_pred H-HH-HhcCCC-----CCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchh
Q 002051 881 A-NI-LHKDLK-----FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 939 (975)
Q Consensus 881 ~-~i-~~~~~~-----~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~ 939 (975)
. .. ...... .+....++...+.+|.+||+.||.+|+| +++|++.+||+.++-..+
T Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~t----i~~i~~d~W~~~i~~c~v 596 (601)
T KOG0590|consen 535 FKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRIT----IEQILNDEWIRSIECCHV 596 (601)
T ss_pred hhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheec----HHHHhhChHhhhcceEEe
Confidence 1 11 111111 1111235667899999999999999999 999999999998865543
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.9e-21 Score=199.98 Aligned_cols=199 Identities=24% Similarity=0.348 Sum_probs=162.0
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-----------------------hccccccCCeEEEEE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-----------------------MLNRNKTKTHVCLIT 721 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-----------------------~~~~~~~~~~~~lV~ 721 (975)
.+-.-.|++.++||.|+||.++.+...-++++||||.-.... ++.......|-.|||
T Consensus 24 ~~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi 103 (449)
T KOG1165|consen 24 LMVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI 103 (449)
T ss_pred eEecccceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence 345668999999999999999999999999999999753321 111222455667999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC-----cEEEeeccCCCccCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-----HVSLTDFDLSCLTSC 796 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g-----~vkL~DFG~a~~~~~ 796 (975)
|++ |.+|.|++.-. ...|+...+..++.|++.-++|+|++.+|.|||||+|+||...+ .|.++|||+|+.+..
T Consensus 104 dLL-GPSLEDLFD~C-gR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD 181 (449)
T KOG1165|consen 104 DLL-GPSLEDLFDLC-GRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD 181 (449)
T ss_pred hhh-CcCHHHHHHHh-cCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence 999 99999998865 35799999999999999999999999999999999999997543 589999999987653
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCC---
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG--- 873 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~--- 873 (975)
..... +-+.....+..||..||+-...+|...+..-|+-|||.++++.+.|..||.|
T Consensus 182 p~Tkq--------------------HIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA 241 (449)
T KOG1165|consen 182 PKTKQ--------------------HIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA 241 (449)
T ss_pred ccccc--------------------cCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccC
Confidence 22111 2234556778899999999999999999999999999999999999999987
Q ss_pred CCHHHHHHHHHh
Q 002051 874 KTRQKTFANILH 885 (975)
Q Consensus 874 ~~~~~~~~~i~~ 885 (975)
.+..+-+++|-.
T Consensus 242 ~tnK~kYeKIGe 253 (449)
T KOG1165|consen 242 DTNKEKYEKIGE 253 (449)
T ss_pred cchHHHHHHhcc
Confidence 445555666544
|
|
| >TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.4e-22 Score=234.03 Aligned_cols=244 Identities=20% Similarity=0.295 Sum_probs=192.3
Q ss_pred HHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEE
Q 002051 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRL 267 (975)
Q Consensus 188 ~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~ 267 (975)
.+.|+.+++.++++++++|. +|+++++|++|++++||++++++|++...+.++.........+.+.+..+..+..++
T Consensus 3 ~~~~~~i~~~~~~~i~~~d~---~g~~~~~N~~~~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (494)
T TIGR02938 3 PEAYRQTVDQAPLAISITDL---KANILYANDAFTRITGYTKEEIIGKNESVLSNHTTPPEVYQALWGSLAEQKPWAGKL 79 (494)
T ss_pred hHHHHHHHHhCCceEEEECC---CCcEEEEchhheeecCCCHHHHhCCCchhhcCCCCCHHHHHHHHHHHHhCCccccee
Confidence 36789999999999999999 999999999999999999999999987777776667777778888888888888888
Q ss_pred EEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHhhhcCCCCCchhhhhHHHHHHHHHHhhHHHHHHHhc
Q 002051 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMK 347 (975)
Q Consensus 268 ~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~~~~~~l~~r~~~~d~~~~~~~~~~~~~l~~~~~ 347 (975)
..++++|..+|+..++.|+++.+|.+.+++++++|||++|+++++++.
T Consensus 80 ~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIt~~k~~e~~l~~-------------------------------- 127 (494)
T TIGR02938 80 LNRRKDGELYLAELTVAPVLNEAGETTHFLGMHRDITELHRLEQVVAN-------------------------------- 127 (494)
T ss_pred eccCCCccchhhheeeEEEECCCCCEEEEEEehhhhhHHHHHHHHHHH--------------------------------
Confidence 888999999999999999999999999999999999999998877541
Q ss_pred CccccccCCCCCcccccCCCchhhhhhccccCCCCCCCCCCCCCCCCCCcccccccccccccccccccCccccccccccc
Q 002051 348 KPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFMGLIGRK 427 (975)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (975)
T Consensus 128 -------------------------------------------------------------------------------- 127 (494)
T TIGR02938 128 -------------------------------------------------------------------------------- 127 (494)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCcccchhhhcCCCCCCCCCCCCCchhhHHHHHHHhhcCcHHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHH
Q 002051 428 SQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLEL 507 (975)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~er~~~~~~l~~~~~l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l 507 (975)
.+. .|+.++++++++++++|.+|. ++++|++|+++
T Consensus 128 -------------------------------------~~~-----~~~~~~~~~~~~i~~~d~~~~---i~~~N~~~~~~ 162 (494)
T TIGR02938 128 -------------------------------------QKL-----LIESVVDAAPVAFVLLDPTGR---VILDNQEYKKL 162 (494)
T ss_pred -------------------------------------HHH-----HHHHHHhcccceEEEEcCCCC---EEEechhHHHh
Confidence 001 178899999999999999666 99999999999
Q ss_pred cCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEE-EEEEEEccCCc-EEEEEEEEeeeecCCCCE---------
Q 002051 508 TEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVT-VQLINYTKSGK-KFWNLFHLQPMRDQKGEV--------- 576 (975)
Q Consensus 508 ~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~-~e~~~~~kdG~-~~wv~~~~~pi~d~~G~i--------- 576 (975)
+|+...+..+.....+.+++..... ......+..+. .+......+|. .+|+.....++.+.+|.+
T Consensus 163 ~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (494)
T TIGR02938 163 ATDLRVKEPAHTVLDLLREAWREAL----AENWPQQLAFSNREARFDRGGGRPARWLSCTGSVIGMESDCADSFFCAAEQ 238 (494)
T ss_pred hchhhhhHHHHHHHHHhhHHhhhhh----hhcchhhhccccceeeeccCCCceeeEEEecCceEEeecchhhheeccCCC
Confidence 9999888777654444443332222 11111122222 23444455555 789999988887766654
Q ss_pred EEEEEEeecCCcccccccC
Q 002051 577 QYFIGVQLDGSEHLEPLRN 595 (975)
Q Consensus 577 ~~~v~i~rDITerk~~e~~ 595 (975)
.+++++++|||++|+++++
T Consensus 239 ~~~~~~~~DITe~k~~ee~ 257 (494)
T TIGR02938 239 PYLLLTIADISNLREEQER 257 (494)
T ss_pred chheehHHHHHHHHHHHHH
Confidence 3456789999999986554
|
NifL is a modulator of the nitrogen fixation positive regulator protein NifA, and is therefore a negative regulator. It binds NifA. NifA and NifL are encoded by adjacent genes. |
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.3e-20 Score=209.40 Aligned_cols=229 Identities=23% Similarity=0.244 Sum_probs=172.9
Q ss_pred CcccccccccCCceEEEEEEEeCCC-eEEEEEEeccchh----------------------------cccc-ccCCeEEE
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSG-QYFAMKAMDKGVM----------------------------LNRN-KTKTHVCL 719 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~-~~vAiK~l~~~~~----------------------------~~~~-~~~~~~~l 719 (975)
+|++.++||+|+||.||+|.+..++ ..+|+|+...... .... ....+-||
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 8999999999999999999998774 6899998655310 1111 24567899
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC-----CcEEEeeccCCCcc
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-----GHVSLTDFDLSCLT 794 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~-----g~vkL~DFG~a~~~ 794 (975)
||+.+ |.+|.++....+.+.++...+..++.|++.+|.+||+.|++||||||+|+++... ..+.|.|||+++..
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~ 177 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRF 177 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccc
Confidence 99999 9999999977766789999999999999999999999999999999999999865 36999999999832
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccc-cccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCC
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRA-SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 873 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~ 873 (975)
....... .. ...... ...+.||..|+++.+..+...+.+.|+||++.++.+++.|..||.+
T Consensus 178 ~~~~~~~----~~--------------~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~ 239 (322)
T KOG1164|consen 178 KYVGDSG----GN--------------LRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEA 239 (322)
T ss_pred cccCCCC----cc--------------cccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCcc
Confidence 2111000 00 000111 2356799999999999999999999999999999999999999977
Q ss_pred CCHHHHHHHHHh---cCCCCCCCCCCcHHHHHHHHHhcccCccccCC
Q 002051 874 KTRQKTFANILH---KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLG 917 (975)
Q Consensus 874 ~~~~~~~~~i~~---~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t 917 (975)
.........+.. ...........+..+..++..+-..+...+|.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pd 286 (322)
T KOG1164|consen 240 LEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPD 286 (322)
T ss_pred ccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCC
Confidence 553322222222 11111112224567778888777788999998
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.4e-20 Score=199.86 Aligned_cols=233 Identities=17% Similarity=0.171 Sum_probs=179.0
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCC-----eEEEEEEeccch------------hcccc--------------c
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSG-----QYFAMKAMDKGV------------MLNRN--------------K 712 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~-----~~vAiK~l~~~~------------~~~~~--------------~ 712 (975)
-.+...+++....+-+|.||.||.|.+..-+ +.+-+|.++... +.-.. .
T Consensus 279 l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie 358 (563)
T KOG1024|consen 279 LTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIE 358 (563)
T ss_pred hhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEee
Confidence 3456678899999999999999999765432 334455443321 00000 1
Q ss_pred cCCeEEEEEeccCCCCHHHHHhh------CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEe
Q 002051 713 TKTHVCLITDYCPGGELFLLLDR------QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLT 786 (975)
Q Consensus 713 ~~~~~~lV~Ey~~ggsL~~~l~~------~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~ 786 (975)
+....+.++.++.-|+|..++.. .....++..++..++.|+..|++|||++||||.||-..|.+|++.-++||+
T Consensus 359 ~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVklt 438 (563)
T KOG1024|consen 359 DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLT 438 (563)
T ss_pred ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEec
Confidence 34445678889988999999972 223457778888999999999999999999999999999999999999999
Q ss_pred eccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh
Q 002051 787 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY 866 (975)
Q Consensus 787 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~ 866 (975)
|=.+++.+-...- .........+..||+||.+....|+.++|+||||++||||++
T Consensus 439 DsaLSRDLFP~DY-------------------------hcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmt 493 (563)
T KOG1024|consen 439 DSALSRDLFPGDY-------------------------HCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMT 493 (563)
T ss_pred cchhccccCcccc-------------------------cccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHh
Confidence 9988865321100 001111223567999999999999999999999999999996
Q ss_pred -CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 867 -GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 867 -G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
|+.||...++.++..-+..+ +.+..+.++++++..+|--||..+|++||+ .+|+.
T Consensus 494 lg~~PyaeIDPfEm~~ylkdG-yRlaQP~NCPDeLf~vMacCWallpeeRPs----f~Qlv 549 (563)
T KOG1024|consen 494 LGKLPYAEIDPFEMEHYLKDG-YRLAQPFNCPDELFTVMACCWALLPEERPS----FSQLV 549 (563)
T ss_pred cCCCCccccCHHHHHHHHhcc-ceecCCCCCcHHHHHHHHHHHhcCcccCCC----HHHHH
Confidence 99999999998887666554 566666678999999999999999999999 66664
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.80 E-value=3e-18 Score=189.97 Aligned_cols=235 Identities=35% Similarity=0.547 Sum_probs=178.4
Q ss_pred cccccccccCCceEEEEEEEeCCCeEEEEEEeccchhccc----------------------------cccCCeEEEEEe
Q 002051 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR----------------------------NKTKTHVCLITD 722 (975)
Q Consensus 671 y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~~----------------------------~~~~~~~~lV~E 722 (975)
|.+...||.|+||.||++.+. ..+++|.+........ .......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 778899999999999999997 7889998765432111 113444799999
Q ss_pred ccCCCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC-cEEEeeccCCCccCCCCCC
Q 002051 723 YCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~-~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g-~vkL~DFG~a~~~~~~~~~ 800 (975)
|+.++++.+++..... ..+....+..++.|++.++.|+|+.+++||||||+||+++..+ .++++|||.+.........
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 9999999977765421 2689999999999999999999999999999999999999988 7999999998643321100
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC---CCCCChhHHHHHHHHHHHHHhCCCCCCCCCH-
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPFRGKTR- 876 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~---~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~- 876 (975)
. .........+|+..|++||.+.+ ..+....|+||+|+++++++.|..||.....
T Consensus 159 ~---------------------~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~ 217 (384)
T COG0515 159 S---------------------SIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS 217 (384)
T ss_pred c---------------------cccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc
Confidence 0 00012356789999999999988 5788899999999999999999999887663
Q ss_pred ---HHHHHHHHhcCCC-CCCCCCC------cHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 877 ---QKTFANILHKDLK-FPSSTPT------SLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 877 ---~~~~~~i~~~~~~-~p~~~~~------s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
......+...... ....... ...+.+++.+|+..+|..|.+ ..+...+++...
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~----~~~~~~~~~~~~ 280 (384)
T COG0515 218 SATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLS----SSSDLSHDLLAH 280 (384)
T ss_pred ccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCC----HHHHhhchHhhC
Confidence 3444444443322 2222111 257889999999999999999 666666655543
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.4e-19 Score=192.59 Aligned_cols=209 Identities=24% Similarity=0.313 Sum_probs=137.5
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------h-cccc-----------------------
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------M-LNRN----------------------- 711 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------~-~~~~----------------------- 711 (975)
.+...+.||.|+||.||.+.+..||+.+|+|++.... + +...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 4667789999999999999999999999999864321 0 0000
Q ss_pred -----------ccCC-----eEEEEEeccCCCCHHHHHhh---CCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCC
Q 002051 712 -----------KTKT-----HVCLITDYCPGGELFLLLDR---QPTK--VLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 770 (975)
Q Consensus 712 -----------~~~~-----~~~lV~Ey~~ggsL~~~l~~---~~~~--~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDI 770 (975)
.... +.+++|+-+ .++|.+++.- .... .+.......+..|+++.+++||+.|++|+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 0111 346788888 6688887642 1111 1222222445589999999999999999999
Q ss_pred CCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-----
Q 002051 771 KPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG----- 845 (975)
Q Consensus 771 Kp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~----- 845 (975)
||+|+|++.+|.++|+||+.....+.. ... ...+..|.|||....
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~-----------------------------~~~-~~~~~~~~PPe~~~~~~~~~ 221 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTR-----------------------------YRC-SEFPVAFTPPELESCAGQFG 221 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEE-----------------------------EEG-GGS-TTTS-HHHHHHHTSCH
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCce-----------------------------eec-cCCCcccCChhhhhhhcccC
Confidence 999999999999999999876443210 000 234577999997743
Q ss_pred ---CCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCcccc
Q 002051 846 ---AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915 (975)
Q Consensus 846 ---~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R 915 (975)
..++.+.|.|+||+++|.|++|..||........... .+....+++..++.||+.||++||.+|
T Consensus 222 ~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~------~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 222 QNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW------DFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred cccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence 2467899999999999999999999976543221111 222233678899999999999999988
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.8e-19 Score=198.52 Aligned_cols=152 Identities=20% Similarity=0.207 Sum_probs=110.8
Q ss_pred ccCCCcccccccccCCceEEEEEEEeC-CCeEEEEEEeccch-----------h---------------ccccccCCeEE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGV-----------M---------------LNRNKTKTHVC 718 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~-t~~~vAiK~l~~~~-----------~---------------~~~~~~~~~~~ 718 (975)
...++|.+.+.||+|+||+||+|+++. +++.+|||++.... + ..........|
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~~~~~ 94 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLATGKDG 94 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEcCCcE
Confidence 456789999999999999999999876 78888999864220 0 00001234579
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC-CCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL-KPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDI-Kp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
||||||+|++|.. +.. .. ...++.|++.+|.|||++||+|||| ||+|||++.++.+||+|||+|+.+...
T Consensus 95 LVmE~~~G~~L~~-~~~-----~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~ 165 (365)
T PRK09188 95 LVRGWTEGVPLHL-ARP-----HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRR 165 (365)
T ss_pred EEEEccCCCCHHH-hCc-----cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecccC
Confidence 9999999999973 211 11 1467899999999999999999999 999999999999999999999765422
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG 845 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~ 845 (975)
.... .......-...++++.|++||.+..
T Consensus 166 ~~~~-------------------~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 166 GALY-------------------RIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred cchh-------------------hhhhhhhhhhhhccCccCCcccCCh
Confidence 1100 0000112235678889999998843
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.5e-18 Score=184.93 Aligned_cols=198 Identities=23% Similarity=0.295 Sum_probs=140.8
Q ss_pred cCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec--CC--cEEEeec
Q 002051 713 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG--NG--HVSLTDF 788 (975)
Q Consensus 713 ~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~--~g--~vkL~DF 788 (975)
.+..+|+||.-+ ..+|..++-. ...+....+.++.|+++|+.|||.+||.|||+|.+|||+.- ++ .+.++||
T Consensus 314 ~~~tlylvMkrY-~~tLr~yl~~---~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDF 389 (598)
T KOG4158|consen 314 EPKTLYLVMKRY-RQTLREYLWT---RHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADF 389 (598)
T ss_pred CCceEEEehhcc-hhhHHHHHhc---CCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEccc
Confidence 456789999998 5699999875 34677888889999999999999999999999999999953 33 4799999
Q ss_pred cCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCC------CChhHHHHHHHHHH
Q 002051 789 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH------TSAVDWWALGILLY 862 (975)
Q Consensus 789 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~------~~k~DIWSLG~il~ 862 (975)
|++-... +....++.. ...-..-|+-.-||||+....+- ..++|.|+.|.+.|
T Consensus 390 GCcLAd~-~hGlqlpy~--------------------S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaY 448 (598)
T KOG4158|consen 390 GCCLADD-NHGLQLPYE--------------------SDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAY 448 (598)
T ss_pred ceeeecc-ccccccccc--------------------cccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHH
Confidence 9873321 111111111 01112357778899999865432 23899999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCc
Q 002051 863 EMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936 (975)
Q Consensus 863 ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~ 936 (975)
|++....||.+....-.-..-.++..-.+.+..+++.+++++..+|+.||.+|++.. ++..+|+-.-|..-+|
T Consensus 449 EIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~-iAANvl~LsLw~~~~~ 521 (598)
T KOG4158|consen 449 EIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPN-IAANVLNLSLWRMGED 521 (598)
T ss_pred HHhccCCcccccchheechhhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCcc-HHHhHHHHHHhcCchH
Confidence 999999999874432221111222212223355889999999999999999999954 4666665555554444
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.74 E-value=5e-18 Score=175.06 Aligned_cols=116 Identities=16% Similarity=0.202 Sum_probs=93.2
Q ss_pred ccccccCCceEEEEEEEeCCCeEEEEEEeccchhcc-----------c--------------------c-c---------
Q 002051 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-----------R--------------------N-K--------- 712 (975)
Q Consensus 674 ~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~-----------~--------------------~-~--------- 712 (975)
...||+|+||.||+|.+. +|+.||||+++...... . . .
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 568999999999999996 89999999986542100 0 0 0
Q ss_pred -------cCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHH-HHCCCeecCCCCCCEEEecCCcEE
Q 002051 713 -------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYL-HCQGIIYRDLKPENVLLQGNGHVS 784 (975)
Q Consensus 713 -------~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yL-H~~gIiHrDIKp~NILl~~~g~vk 784 (975)
.....+|||||++|+++...+... ..++...+..++.|++.+|.|| |+.||+||||||+|||++ ++.++
T Consensus 81 v~~p~~~~~~~~~iVmE~i~g~~l~~~~~~~--~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~ 157 (190)
T cd05147 81 IPCPEPILLKSHVLVMEFIGDDGWAAPRLKD--APLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLY 157 (190)
T ss_pred CCCCcEEEecCCEEEEEEeCCCCCcchhhhc--CCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEE
Confidence 001237999999888776554332 4689999999999999999999 799999999999999998 57899
Q ss_pred EeeccCCCc
Q 002051 785 LTDFDLSCL 793 (975)
Q Consensus 785 L~DFG~a~~ 793 (975)
|+|||+|..
T Consensus 158 LiDFG~a~~ 166 (190)
T cd05147 158 IIDVSQSVE 166 (190)
T ss_pred EEEcccccc
Confidence 999999854
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.5e-18 Score=202.05 Aligned_cols=222 Identities=23% Similarity=0.285 Sum_probs=158.0
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-h--------------------------ccccccCCeEEEEEe
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-M--------------------------LNRNKTKTHVCLITD 722 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-~--------------------------~~~~~~~~~~~lV~E 722 (975)
+|...+.||.+.|=+|.+|++.+ |. |+||++-+.. . .......+.-|||-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-G~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-GL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-ce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 68888999999999999999954 43 8999886542 0 000114556688889
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
|+ ..+|+|.+..+ ..+..-+.+-|+.||+.||..||..||+|||||.+|||++.-+.+.|+||..-+ +...
T Consensus 102 yv-khnLyDRlSTR--PFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFK-----PtYL- 172 (1431)
T KOG1240|consen 102 YV-KHNLYDRLSTR--PFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFK-----PTYL- 172 (1431)
T ss_pred HH-hhhhhhhhccc--hHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccC-----CccC-
Confidence 98 66999999775 347788888999999999999999999999999999999999999999997432 2111
Q ss_pred CcchhhhhccCCCCCcccccccccccccc----cCCCCccchhhhcCCC-----------CCChhHHHHHHHHHHHHHh-
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSF----VGTEEYIAPEIIAGAG-----------HTSAVDWWALGILLYEMLY- 866 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~Gt~~y~aPE~l~~~~-----------~~~k~DIWSLG~il~ell~- 866 (975)
|. .+......+ ..-..|.|||.+.... .+++.||||+||++.||++
T Consensus 173 Pe------------------DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~E 234 (1431)
T KOG1240|consen 173 PE------------------DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLE 234 (1431)
T ss_pred CC------------------CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhc
Confidence 10 011111111 1234699999885421 4678999999999999996
Q ss_pred CCCCCCCCCHHHHHHHHHhcCCCCCC---CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 867 GYTPFRGKTRQKTFANILHKDLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 867 G~~Pf~~~~~~~~~~~i~~~~~~~p~---~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
|++||.- .++-...++.-..+. ..-.+..++.||..|++.||.+|++ +++.|+-
T Consensus 235 g~PlF~L----SQL~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlS----AedyL~~ 291 (1431)
T KOG1240|consen 235 GRPLFTL----SQLLAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLS----AEDYLQK 291 (1431)
T ss_pred CCCcccH----HHHHhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccC----HHHHHHh
Confidence 7999842 111111111100000 0112346899999999999999999 8888865
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.71 E-value=3e-17 Score=198.97 Aligned_cols=177 Identities=27% Similarity=0.383 Sum_probs=146.0
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhcc---------c---------------cccCCeEEEE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN---------R---------------NKTKTHVCLI 720 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~---------~---------------~~~~~~~~lV 720 (975)
.+....|.|-+.||.|+||+||+|.+.. |+.||||+-+.....+ + ....+.-+||
T Consensus 694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv 772 (974)
T KOG1166|consen 694 EVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLV 772 (974)
T ss_pred eecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHccCCcceee
Confidence 4566789999999999999999999977 9999999865542111 1 1145566899
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-------CCcEEEeeccCCCc
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-------NGHVSLTDFDLSCL 793 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~-------~g~vkL~DFG~a~~ 793 (975)
+||.+.|+|.+++.. .+.+++..+..+..|||..|+.||..+|||+||||+|+||.. ...++|+|||.|..
T Consensus 773 ~ey~~~Gtlld~~N~--~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siD 850 (974)
T KOG1166|consen 773 SEYSPYGTLLDLINT--NKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSID 850 (974)
T ss_pred eeccccccHHHhhcc--CCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEeccccee
Confidence 999999999999974 578999999999999999999999999999999999999953 23599999998854
Q ss_pred cCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCC
Q 002051 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYT 869 (975)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~ 869 (975)
+.. -.........++|-.+-++|...|.++++.+|.|.|+.+++-|+.|+.
T Consensus 851 m~l-------------------------fp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 851 MKL-------------------------FPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred eeE-------------------------cCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 321 011123345678999999999999999999999999999999999864
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.7e-17 Score=168.27 Aligned_cols=118 Identities=17% Similarity=0.208 Sum_probs=93.8
Q ss_pred cccccccCCceEEEEEEEeCCCeEEEEEEeccchhc---------------cc---------------c--c--------
Q 002051 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML---------------NR---------------N--K-------- 712 (975)
Q Consensus 673 i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~---------------~~---------------~--~-------- 712 (975)
+.+.||+|+||+||+|.+. +|+.||||+++..... .. . .
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05145 1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA 79 (190)
T ss_pred CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 3578999999999999987 8999999998754210 00 0 0
Q ss_pred --c------CCeEEEEEeccCCCCHHHH-HhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCc
Q 002051 713 --T------KTHVCLITDYCPGGELFLL-LDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGH 782 (975)
Q Consensus 713 --~------~~~~~lV~Ey~~ggsL~~~-l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~-~gIiHrDIKp~NILl~~~g~ 782 (975)
. ....||||||++|+++... +.. ..++...+..++.|++.+|.+||+ +||+||||||+|||++ ++.
T Consensus 80 ~i~~p~~~~~~~~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~ 155 (190)
T cd05145 80 GVPVPEPILLKKNVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGK 155 (190)
T ss_pred CCCCceEEEecCCEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCC
Confidence 0 0123799999988765443 332 457888999999999999999999 9999999999999999 889
Q ss_pred EEEeeccCCCccC
Q 002051 783 VSLTDFDLSCLTS 795 (975)
Q Consensus 783 vkL~DFG~a~~~~ 795 (975)
++|+|||++....
T Consensus 156 ~~liDFG~a~~~~ 168 (190)
T cd05145 156 PYIIDVSQAVELD 168 (190)
T ss_pred EEEEEcccceecC
Confidence 9999999996543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=5.6e-17 Score=169.38 Aligned_cols=149 Identities=19% Similarity=0.202 Sum_probs=110.7
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-----hc---------ccc-------------------
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-----ML---------NRN------------------- 711 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-----~~---------~~~------------------- 711 (975)
.+..++|++++.||.|+||.||++.. ++..||||++.... .. ...
T Consensus 27 ~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~ 104 (232)
T PRK10359 27 DFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFY 104 (232)
T ss_pred HHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEee
Confidence 34568999999999999999999655 46689999986331 10 000
Q ss_pred c--------cCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcE
Q 002051 712 K--------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHV 783 (975)
Q Consensus 712 ~--------~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~v 783 (975)
. .....+|||||++|.+|.++.. +++ ....+++.+|..||+.|++||||||+||+++.+| +
T Consensus 105 ~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i 173 (232)
T PRK10359 105 LLAERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-L 173 (232)
T ss_pred eecccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-E
Confidence 0 1235789999999999988742 333 2456999999999999999999999999999988 9
Q ss_pred EEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHH
Q 002051 784 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE 863 (975)
Q Consensus 784 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~e 863 (975)
+|+|||.+...... .....+++...|..++|+||||+++..
T Consensus 174 ~liDfg~~~~~~e~---------------------------------------~a~d~~vler~y~~~~di~~lg~~~~~ 214 (232)
T PRK10359 174 RIIDLSGKRCTAQR---------------------------------------KAKDRIDLERHYGIKNEIKDLGYYLLI 214 (232)
T ss_pred EEEECCCcccccch---------------------------------------hhHHHHHHHhHhcccccccceeEeehH
Confidence 99999977442110 000114455557789999999999877
Q ss_pred HH
Q 002051 864 ML 865 (975)
Q Consensus 864 ll 865 (975)
+.
T Consensus 215 ~~ 216 (232)
T PRK10359 215 YK 216 (232)
T ss_pred HH
Confidence 64
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.3e-17 Score=184.09 Aligned_cols=186 Identities=26% Similarity=0.362 Sum_probs=139.1
Q ss_pred CCeEEEEEeccCCCCHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCC
Q 002051 714 KTHVCLITDYCPGGELFLLLDRQ-PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 792 (975)
Q Consensus 714 ~~~~~lV~Ey~~ggsL~~~l~~~-~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~ 792 (975)
..++||.|++|...+|.++|.+. .....+......++.|+..|+.| +|.+|+|+||.||++..++.+||.|||+..
T Consensus 328 ~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~t 404 (516)
T KOG1033|consen 328 KVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVT 404 (516)
T ss_pred ccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhhee
Confidence 45799999999999999999743 33356778889999999999999 999999999999999999999999999986
Q ss_pred ccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCC
Q 002051 793 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPF 871 (975)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf 871 (975)
.....+.. ..........+||..||+||.+.+..|+.++||||||++|+||+. =...|
T Consensus 405 s~~~~~~~---------------------~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~ 463 (516)
T KOG1033|consen 405 SQDKDETV---------------------APAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQF 463 (516)
T ss_pred ecccCCcc---------------------cchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHH
Confidence 55432211 111223456689999999999999999999999999999999997 22222
Q ss_pred CCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 872 RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 872 ~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
.. ...+..+-.+.++. ......+.-..|+.+||.+.|.+||+ +.+.--|+|.
T Consensus 464 er---~~t~~d~r~g~ip~-~~~~d~p~e~~ll~~lls~~p~~RP~----~~~~~~~~~~ 515 (516)
T KOG1033|consen 464 ER---IATLTDIRDGIIPP-EFLQDYPEEYTLLQQLLSPSPEERPS----AIEVALHEFL 515 (516)
T ss_pred HH---HHhhhhhhcCCCCh-HHhhcCcHHHHHHHHhcCCCcccCch----HHHHhhhhhc
Confidence 11 12222233333321 22222345569999999999999998 6666556653
|
|
| >PF13426 PAS_9: PAS domain; PDB: 3ULF_B 3UE6_E 2Z6D_B 2Z6C_B 3P7N_B 1LL8_A 3MJQ_A 3BWL_A 4EET_B 4EEP_A | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.8e-15 Score=138.95 Aligned_cols=104 Identities=26% Similarity=0.564 Sum_probs=97.2
Q ss_pred cCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCCEEE
Q 002051 199 QQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFW 278 (975)
Q Consensus 199 ~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~w 278 (975)
|++|+++|. +|+|+++|++|++++||+++|++|+++..++++.........+.+.+..+..+..++..++++|+.+|
T Consensus 1 p~~i~i~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~ 77 (104)
T PF13426_consen 1 PDGIFILDP---DGRILYVNPAFERLFGYSREELIGKSISDFFPEEDRPEFEEQIERALEEGGSWSGEVRLRRKDGETFW 77 (104)
T ss_dssp -SEEEEEET---TSBEEEE-HHHHHHHTS-HHHHTTSBGGGGCSTTSCHHHHHHHHHHHHHTSSEEEEEEEEETTSEEEE
T ss_pred CEEEEEECC---cCcEEehhHHHHHHHCcCHHHHcCCCcccccCcccchhhHHHHHHHHhcCCceeEEEEEEcCCCCEEE
Confidence 689999999 99999999999999999999999999999998888889999999999999999999999999999999
Q ss_pred EEEEeeeeecCCCCEEEEEEEEeccch
Q 002051 279 NLLTIAPIKDDEGKVLKFIGMQVEVSK 305 (975)
Q Consensus 279 ~~~~i~pi~d~~G~v~~~v~~~rDITe 305 (975)
+++++.|+.+++|++.+++++++||||
T Consensus 78 ~~~~~~~i~~~~g~~~~~i~~~~DiTe 104 (104)
T PF13426_consen 78 VEVSASPIRDEDGEITGIIGIFRDITE 104 (104)
T ss_dssp EEEEEEEEEETTSSEEEEEEEEEEEHH
T ss_pred EEEEEEEEECCCCCEEEEEEEEEECCC
Confidence 999999999999999999999999996
|
... |
| >PF13426 PAS_9: PAS domain; PDB: 3ULF_B 3UE6_E 2Z6D_B 2Z6C_B 3P7N_B 1LL8_A 3MJQ_A 3BWL_A 4EET_B 4EEP_A | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.6e-15 Score=139.31 Aligned_cols=104 Identities=28% Similarity=0.460 Sum_probs=96.5
Q ss_pred cCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEccCCcEEE
Q 002051 482 EKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFW 561 (975)
Q Consensus 482 ~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~~kdG~~~w 561 (975)
|++++++|.+|. |++||++|++++||++++++|+++..+++++......+.+.+.+..+..+..++.+++++|+.+|
T Consensus 1 p~~i~i~d~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~ 77 (104)
T PF13426_consen 1 PDGIFILDPDGR---ILYVNPAFERLFGYSREELIGKSISDFFPEEDRPEFEEQIERALEEGGSWSGEVRLRRKDGETFW 77 (104)
T ss_dssp -SEEEEEETTSB---EEEE-HHHHHHHTS-HHHHTTSBGGGGCSTTSCHHHHHHHHHHHHHTSSEEEEEEEEETTSEEEE
T ss_pred CEEEEEECCcCc---EEehhHHHHHHHCcCHHHHcCCCcccccCcccchhhHHHHHHHHhcCCceeEEEEEEcCCCCEEE
Confidence 689999999766 99999999999999999999999999999888888999999999999999999999999999999
Q ss_pred EEEEEeeeecCCCCEEEEEEEeecCCc
Q 002051 562 NLFHLQPMRDQKGEVQYFIGVQLDGSE 588 (975)
Q Consensus 562 v~~~~~pi~d~~G~i~~~v~i~rDITe 588 (975)
++++++|+++++|++.+++++++||||
T Consensus 78 ~~~~~~~i~~~~g~~~~~i~~~~DiTe 104 (104)
T PF13426_consen 78 VEVSASPIRDEDGEITGIIGIFRDITE 104 (104)
T ss_dssp EEEEEEEEEETTSSEEEEEEEEEEEHH
T ss_pred EEEEEEEEECCCCCEEEEEEEEEECCC
Confidence 999999999999999999999999996
|
... |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.7e-16 Score=185.39 Aligned_cols=282 Identities=33% Similarity=0.545 Sum_probs=215.7
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhcccc---------------------------ccCCeEE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN---------------------------KTKTHVC 718 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~~~---------------------------~~~~~~~ 718 (975)
...+.+.+++-+-+|+||.++.+.-..+|..+++|+..+..++... ......+
T Consensus 801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~ 880 (1205)
T KOG0606|consen 801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLP 880 (1205)
T ss_pred CCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcc
Confidence 4566788889999999999999998888877777765543322111 1345678
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
||++|+.|++|...+..- ++.+.+-++.++..+.++++|||+..+.|+|++|.|+|...+|..++.|||........+
T Consensus 881 L~~~~~~~~~~~Skl~~~--~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~ 958 (1205)
T KOG0606|consen 881 LVGHYLNGGDLPSKLHNS--GCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIP 958 (1205)
T ss_pred hhhHHhccCCchhhhhcC--CCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCcccccccccccc
Confidence 999999999999999875 457888889999999999999999999999999999999999999999999554433221
Q ss_pred CCCCC---cch-hhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCC
Q 002051 799 QLLLP---TTN-EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 874 (975)
Q Consensus 799 ~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~ 874 (975)
....- ... ....-......+..-...........||+.|.+||.+.+......+|.|++|+++++.++|.+||...
T Consensus 959 p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen 959 PTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAE 1038 (1205)
T ss_pred CcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCc
Confidence 11000 000 00000011111111122234456778999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCCCCCC-CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhccCCCCCCCC
Q 002051 875 TRQKTFANILHKDLKFPSS-TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAP 950 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~~p~~-~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~~~~~~~~~p 950 (975)
.....+.++.....++|.- ...+...++++.++|..+|.+|..+. ++.++..|+||+.++|..+.......++.|
T Consensus 1039 tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~-~~~e~k~~~~~~~~~~~~l~~q~~~~~p~~ 1114 (1205)
T KOG0606|consen 1039 TPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK-GAAEVKGHPFFQDVDWENLALQKAEFVPQP 1114 (1205)
T ss_pred chhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc-cccccccCCccCCCCccccccccCccCCCC
Confidence 9999999999999888875 34688999999999999999999932 344889999999999998765555544333
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.63 E-value=9.3e-16 Score=156.18 Aligned_cols=217 Identities=20% Similarity=0.315 Sum_probs=171.9
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------------------hccccccCCeEE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------------------MLNRNKTKTHVC 718 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------------~~~~~~~~~~~~ 718 (975)
-++.++..++.+|.....|..|++++.. ..++.|++.... ++.......++.
T Consensus 186 gid~~~lnl~tkl~e~hsgelwrgrwqg--ndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv 263 (448)
T KOG0195|consen 186 GIDVSSLNLITKLAESHSGELWRGRWQG--NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLV 263 (448)
T ss_pred CcchhhhhhhhhhccCCCcccccccccC--cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCce
Confidence 4667788899999999999999999844 456667664332 122223567889
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEEecCCcEEE--eeccCCCcc
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSL--TDFDLSCLT 794 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~g--IiHrDIKp~NILl~~~g~vkL--~DFG~a~~~ 794 (975)
++..||+-|+|+.++.....-..+..++..++..|+.|++|||+.. |..--|....++++++-+.+| +|-.++...
T Consensus 264 ~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe 343 (448)
T KOG0195|consen 264 IISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQE 343 (448)
T ss_pred EeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeec
Confidence 9999999999999998876667888999999999999999999974 334467888899988765544 343332110
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCC---ChhHHHHHHHHHHHHHhCCCCC
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT---SAVDWWALGILLYEMLYGYTPF 871 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~---~k~DIWSLG~il~ell~G~~Pf 871 (975)
....-.|.||+||.+...+-+ .++|+|||++++|||.+...||
T Consensus 344 ----------------------------------~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpf 389 (448)
T KOG0195|consen 344 ----------------------------------VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPF 389 (448)
T ss_pred ----------------------------------cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhcccccc
Confidence 011236889999999877654 3799999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCC
Q 002051 872 RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLG 917 (975)
Q Consensus 872 ~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t 917 (975)
...++.+.-.+|.-+.+....++.++.....||+-|++.||.+||.
T Consensus 390 adlspmecgmkialeglrv~ippgis~hm~klm~icmnedpgkrpk 435 (448)
T KOG0195|consen 390 ADLSPMECGMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPK 435 (448)
T ss_pred ccCCchhhhhhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCC
Confidence 9999988888887777777777788999999999999999999999
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.62 E-value=9.6e-16 Score=163.53 Aligned_cols=121 Identities=18% Similarity=0.177 Sum_probs=97.5
Q ss_pred CcccccccccCCceEEEEEE-EeCCCeEEEEEEeccchhc---------------------------------------c
Q 002051 670 HFRPIKPLGSGDTGSVHLVE-LCGSGQYFAMKAMDKGVML---------------------------------------N 709 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~-~~~t~~~vAiK~l~~~~~~---------------------------------------~ 709 (975)
-|.+.+.||.|+||.||+|. +..+|+.||||+++..... .
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 58899999999999999999 7778999999998643100 0
Q ss_pred c-cc------cCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCCCCEEEecCC
Q 002051 710 R-NK------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG-IIYRDLKPENVLLQGNG 781 (975)
Q Consensus 710 ~-~~------~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~g-IiHrDIKp~NILl~~~g 781 (975)
. .. .....||||||++|++|..++... ..+....+..++.||+.+|.+||++| |+||||||+|||++ ++
T Consensus 109 ~~~i~~p~~~~~~~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~~ 185 (237)
T smart00090 109 EAGVPVPKPIAWRRNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-DG 185 (237)
T ss_pred hcCCCCCeeeEecCceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-CC
Confidence 0 00 112357999999888887665332 34666778899999999999999999 99999999999999 88
Q ss_pred cEEEeeccCCCc
Q 002051 782 HVSLTDFDLSCL 793 (975)
Q Consensus 782 ~vkL~DFG~a~~ 793 (975)
.++|+|||.+..
T Consensus 186 ~i~LiDFg~a~~ 197 (237)
T smart00090 186 KVVIIDVSQSVE 197 (237)
T ss_pred CEEEEEChhhhc
Confidence 999999999854
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.3e-15 Score=151.95 Aligned_cols=179 Identities=18% Similarity=0.194 Sum_probs=118.6
Q ss_pred ccccccccCCceEEEEEEEeCCCeEEEEEEeccchh----------------ccccc---------cCCeEEEEEeccCC
Q 002051 672 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM----------------LNRNK---------TKTHVCLITDYCPG 726 (975)
Q Consensus 672 ~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~----------------~~~~~---------~~~~~~lV~Ey~~g 726 (975)
-+...|++|+||+||++.. .+..++.+.+..... +.... .-...|++|||+.|
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~~~~lvmeyI~G 82 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWDGRHLDRSYLAG 82 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEcCEEEEEeeecC
Confidence 4567899999999997766 567777665433211 11110 12345999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC-CCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcc
Q 002051 727 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL-KPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 805 (975)
Q Consensus 727 gsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDI-Kp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 805 (975)
.+|...+.. . ...++.|++.+|.+||++||+|||| ||+|||++.+|.++|+|||+|.......... ..
T Consensus 83 ~~L~~~~~~--------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~--r~ 151 (218)
T PRK12274 83 AAMYQRPPR--------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWM--RL 151 (218)
T ss_pred ccHHhhhhh--------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHH--HH
Confidence 998754421 1 1347789999999999999999999 7999999999999999999997543221100 00
Q ss_pred hhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCC-ChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 806 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHT-SAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~-~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
-. .+. ..+.. ..-...++.|+.|+.-... ..+ ...+.++.|+.+|.++|+..++.+.+
T Consensus 152 L~-~rD----------l~~ll-k~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 152 LA-RED----------LRHLL-KHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred HH-HHH----------HHHHH-HHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 00 000 00000 0011257788888865433 223 46777889999999999999876543
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.3e-14 Score=148.14 Aligned_cols=116 Identities=20% Similarity=0.196 Sum_probs=92.9
Q ss_pred cccccccccCCceEEEEEEEeCCCeEEEEEEeccchh----------------------------------c----cc--
Q 002051 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM----------------------------------L----NR-- 710 (975)
Q Consensus 671 y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~----------------------------------~----~~-- 710 (975)
|.+.+.||.|+||.||++... +|+.||||++..... . ..
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 888999999999999999884 799999998653210 0 00
Q ss_pred ----cccCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEe
Q 002051 711 ----NKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLT 786 (975)
Q Consensus 711 ----~~~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~ 786 (975)
.......|+||||++|++|..+... .....++.+|+.++.++|+.||+||||||+||+++.++.++|+
T Consensus 96 ~v~~~~~~~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~li 167 (198)
T cd05144 96 PVPKPIDWNRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYII 167 (198)
T ss_pred CCCceeecCCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEEEE
Confidence 0012356899999999998765421 2356788999999999999999999999999999999999999
Q ss_pred eccCCCccC
Q 002051 787 DFDLSCLTS 795 (975)
Q Consensus 787 DFG~a~~~~ 795 (975)
|||.+....
T Consensus 168 Dfg~~~~~~ 176 (198)
T cd05144 168 DWPQMVSTD 176 (198)
T ss_pred ECCccccCC
Confidence 999985543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PF08448 PAS_4: PAS fold; InterPro: IPR013656 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs [] | Back alignment and domain information |
|---|
Probab=99.52 E-value=6.2e-14 Score=130.29 Aligned_cols=110 Identities=24% Similarity=0.365 Sum_probs=100.3
Q ss_pred HHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCC
Q 002051 195 LSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDG 274 (975)
Q Consensus 195 ld~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG 274 (975)
|++++++++++|. +|+|+++|+++++++|++.++++|+++..++++.........+.+++.++.....+..... +|
T Consensus 1 l~~~p~~i~v~D~---~~~i~~~N~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 76 (110)
T PF08448_consen 1 LDSSPDGIFVIDP---DGRIVYANQAAAELFGVSPEELIGRSLFDLLPPEDREEFQAALRRALAGGEPVFFEEILLR-DG 76 (110)
T ss_dssp HHHCSSEEEEEET---TSBEEEE-HHHHHHHTSTHHHHTTSBHHHHSCCGCHHHHHHHHHHHHHHTSEEEEEEEECT-TS
T ss_pred CCCCCceeEEECC---CCEEEEEHHHHHHHhCCCHHHHhhccchhccccchhhhhHHHHHHhhccCceEEEEEEEee-cC
Confidence 6889999999999 9999999999999999999999999999888888888888999999999888776665544 99
Q ss_pred CEEEEEEEeeeeecCCCCEEEEEEEEeccchhhH
Q 002051 275 TPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTE 308 (975)
Q Consensus 275 ~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~ 308 (975)
...|+.+++.|++|.+|++.|++++++|||++|+
T Consensus 77 ~~~~~~~~~~Pi~~~~g~~~g~~~~~~DiT~~rr 110 (110)
T PF08448_consen 77 EERWFEVSISPIFDEDGEVVGVLVIIRDITERRR 110 (110)
T ss_dssp CEEEEEEEEEEEECTTTCEEEEEEEEEEECCHHH
T ss_pred CcEEEEEEEEEeEcCCCCEEEEEEEEEECchhhC
Confidence 9999999999999999999999999999999885
|
The PAS fold appears in archaea, eubacteria and eukarya. ; PDB: 3K3D_A 3K3C_B 3KX0_X 3FC7_B 3LUQ_D 3MXQ_A 3BWL_C 3FG8_A. |
| >PF08448 PAS_4: PAS fold; InterPro: IPR013656 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs [] | Back alignment and domain information |
|---|
Probab=99.52 E-value=6.1e-14 Score=130.33 Aligned_cols=110 Identities=25% Similarity=0.335 Sum_probs=99.9
Q ss_pred HHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEccCC
Q 002051 478 LERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSG 557 (975)
Q Consensus 478 ~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~~kdG 557 (975)
|++++++++++|.+|+ |+++|+++++++|++.++++|+++..++++.....+...+.+++..+.....+..... +|
T Consensus 1 l~~~p~~i~v~D~~~~---i~~~N~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 76 (110)
T PF08448_consen 1 LDSSPDGIFVIDPDGR---IVYANQAAAELFGVSPEELIGRSLFDLLPPEDREEFQAALRRALAGGEPVFFEEILLR-DG 76 (110)
T ss_dssp HHHCSSEEEEEETTSB---EEEE-HHHHHHHTSTHHHHTTSBHHHHSCCGCHHHHHHHHHHHHHHTSEEEEEEEECT-TS
T ss_pred CCCCCceeEEECCCCE---EEEEHHHHHHHhCCCHHHHhhccchhccccchhhhhHHHHHHhhccCceEEEEEEEee-cC
Confidence 6889999999999766 9999999999999999999999988888888888888899999999888777666655 99
Q ss_pred cEEEEEEEEeeeecCCCCEEEEEEEeecCCcccc
Q 002051 558 KKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (975)
Q Consensus 558 ~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~ 591 (975)
..+|+.++++|++|.+|++.|++++++|||++|+
T Consensus 77 ~~~~~~~~~~Pi~~~~g~~~g~~~~~~DiT~~rr 110 (110)
T PF08448_consen 77 EERWFEVSISPIFDEDGEVVGVLVIIRDITERRR 110 (110)
T ss_dssp CEEEEEEEEEEEECTTTCEEEEEEEEEEECCHHH
T ss_pred CcEEEEEEEEEeEcCCCCEEEEEEEEEECchhhC
Confidence 9999999999999999999999999999999974
|
The PAS fold appears in archaea, eubacteria and eukarya. ; PDB: 3K3D_A 3K3C_B 3KX0_X 3FC7_B 3LUQ_D 3MXQ_A 3BWL_C 3FG8_A. |
| >PF00989 PAS: PAS fold; InterPro: IPR013767 PAS domains are involved in many signalling proteins where they are used as a signal sensor domain [] | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.1e-13 Score=129.23 Aligned_cols=112 Identities=21% Similarity=0.385 Sum_probs=97.3
Q ss_pred HHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEE-EE
Q 002051 189 DIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG-RL 267 (975)
Q Consensus 189 ~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~-e~ 267 (975)
++|++++++++++++++|. +|+|+|+|++|++++||+.++++|+++..++++++.......+.+.+..++.... ..
T Consensus 1 e~~~~i~~~~~~~i~~~d~---~g~I~~~N~a~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (113)
T PF00989_consen 1 ERYRAILENSPDGIFVIDE---DGRILYVNQAAEELLGYSREELIGKSLFDLIHPEDRRELRERLRQALSQGESGESFEV 77 (113)
T ss_dssp HHHHHHHHCSSSEEEEEET---TSBEEEECHHHHHHHSS-HHHHTTSBGGGGCSGGGHHHHHHHHHHHHHHCCHECEEEE
T ss_pred CHHHHHHhcCCceEEEEeC---cCeEEEECHHHHHHHccCHHHHcCCcHHHhcCchhhHHHHHHHHHHHHcCCCceeEEE
Confidence 4689999999999999999 9999999999999999999999999999888877666677888888888776544 33
Q ss_pred EEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEecc
Q 002051 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEV 303 (975)
Q Consensus 268 ~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDI 303 (975)
....++|..+|+.+..+|+++.+|++.|++++++||
T Consensus 78 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~DI 113 (113)
T PF00989_consen 78 RFRLRDGRPRWVEVRASPVRDEDGQIIGILVIFRDI 113 (113)
T ss_dssp EEEETTSCEEEEEEEEEEEEETTEEEEEEEEEEEE-
T ss_pred EEEecCCcEEEEEEEEEEEEeCCCCEEEEEEEEEeC
Confidence 344469999999999999999999999999999997
|
PAS domains appear in archaea, bacteria and eukaryotes. Several PAS-domain proteins are known to detect their signal by way of an associated cofactor. Haeme, flavin, and a 4-hydroxycinnamyl chromophore are used in different proteins. The PAS domain was named after three proteins that it occurs in: Per- period circadian protein Arnt- Ah receptor nuclear translocator protein Sim- single-minded protein. PAS domains are often associated with PAC domains IPR001610 from INTERPRO. It appears that these domains are directly linked, and that together they form the conserved 3D PAS fold. The division between the PAS and PAC domains is caused by major differences in sequences in the region connecting these two motifs []. In human PAS kinase, this region has been shown to be very flexible, and adopts different conformations depending on the bound ligand []. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels [].; GO: 0006355 regulation of transcription, DNA-dependent; PDB: 2GJ3_A 4F3L_B 1XFN_A 1OTD_A 2PYR_A 1KOU_A 1XFQ_A 2ZOI_A 2ZOH_A 1OTA_A .... |
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.7e-14 Score=144.73 Aligned_cols=117 Identities=19% Similarity=0.239 Sum_probs=88.0
Q ss_pred cccccccCCceEEEEEEEeCCCeEEEEEEeccchhc-----cc-----------------------cc------------
Q 002051 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----NR-----------------------NK------------ 712 (975)
Q Consensus 673 i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~-----~~-----------------------~~------------ 712 (975)
+.+.||+|+||.||+|.+. +++.||||++...... .. ..
T Consensus 1 ~~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~ 79 (187)
T cd05119 1 VGGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGV 79 (187)
T ss_pred CCcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCC
Confidence 3578999999999999986 8899999987753210 00 00
Q ss_pred ------cCCeEEEEEeccCCCCHHH-HHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEE
Q 002051 713 ------TKTHVCLITDYCPGGELFL-LLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVS 784 (975)
Q Consensus 713 ------~~~~~~lV~Ey~~ggsL~~-~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~-~gIiHrDIKp~NILl~~~g~vk 784 (975)
.-...++||||++|+.+.. .+... ... ..+..++.+++.++.++|. .||+|+||||+||+++ ++.++
T Consensus 80 ~~~~~~~~~~~~lv~e~~~g~~~~~~~l~~~---~~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~~ 154 (187)
T cd05119 80 PVPKPIDLNRHVLVMEFIGGDGIPAPRLKDV---RLL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGKVY 154 (187)
T ss_pred CCCceEecCCCEEEEEEeCCCCccChhhhhh---hhc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcEE
Confidence 0124589999998854321 12111 011 6678899999999999999 9999999999999999 88999
Q ss_pred EeeccCCCccC
Q 002051 785 LTDFDLSCLTS 795 (975)
Q Consensus 785 L~DFG~a~~~~ 795 (975)
|+|||.+....
T Consensus 155 liDfg~a~~~~ 165 (187)
T cd05119 155 IIDVPQAVEID 165 (187)
T ss_pred EEECccccccc
Confidence 99999986543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.9e-15 Score=178.96 Aligned_cols=238 Identities=25% Similarity=0.383 Sum_probs=181.3
Q ss_pred CCCcccccccccCCceEEEEEEEeC-CCeEEEEEEeccch---------------------------hccccccCCeEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGV---------------------------MLNRNKTKTHVCL 719 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~-t~~~vAiK~l~~~~---------------------------~~~~~~~~~~~~l 719 (975)
...|.+.+.||+|+|+.|-++.... +...+|+|.+.... ++.........++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 4568899999999999998887743 34456666543221 1222235677899
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeecCCCCCCEEEecCC-cEEEeeccCCCccCCC
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH-CQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCK 797 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH-~~gIiHrDIKp~NILl~~~g-~vkL~DFG~a~~~~~~ 797 (975)
+++|..|+++++.+........+...+..++.|+..++.|+| ..++.|+||||+|.+++..+ .+++.|||+|..+...
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~ 178 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNK 178 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhcccccc
Confidence 999999999999883222225777788889999999999999 99999999999999999999 9999999999765421
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccC-CCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVG-TEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-t~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
. .........+| ++.|+|||.+.+. ......|+||+|+++.-+++|..||....
T Consensus 179 ~------------------------g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~ 234 (601)
T KOG0590|consen 179 N------------------------GAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPS 234 (601)
T ss_pred C------------------------CcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccc
Confidence 0 01122334577 9999999999885 44678999999999999999999997654
Q ss_pred HHHHHH-HHHhc--CCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 876 RQKTFA-NILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 876 ~~~~~~-~i~~~--~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
...... ..... ......+..++....+++.++|..+|..|.+ .+++..+||+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s----~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 235 RKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLS----IEELKLDNWLSS 291 (601)
T ss_pred cccccceeecccccccccCccccCChhhhhcccccccCCchhccc----cccccccccccc
Confidence 433221 11111 1123344567888999999999999999999 999999999998
|
|
| >PF00989 PAS: PAS fold; InterPro: IPR013767 PAS domains are involved in many signalling proteins where they are used as a signal sensor domain [] | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.1e-13 Score=129.34 Aligned_cols=111 Identities=22% Similarity=0.328 Sum_probs=96.2
Q ss_pred cHHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEE-EEE
Q 002051 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTV-QLI 551 (975)
Q Consensus 473 ~l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~-e~~ 551 (975)
+|+.++++++++++++|.+|+ |+|+|++|+++|||+.++++|+++..++++++.......+...+..+..... +..
T Consensus 2 ~~~~i~~~~~~~i~~~d~~g~---I~~~N~a~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (113)
T PF00989_consen 2 RYRAILENSPDGIFVIDEDGR---ILYVNQAAEELLGYSREELIGKSLFDLIHPEDRRELRERLRQALSQGESGESFEVR 78 (113)
T ss_dssp HHHHHHHCSSSEEEEEETTSB---EEEECHHHHHHHSS-HHHHTTSBGGGGCSGGGHHHHHHHHHHHHHHCCHECEEEEE
T ss_pred HHHHHHhcCCceEEEEeCcCe---EEEECHHHHHHHccCHHHHcCCcHHHhcCchhhHHHHHHHHHHHHcCCCceeEEEE
Confidence 389999999999999998766 9999999999999999999999999888888776777888888877776443 444
Q ss_pred EEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecC
Q 002051 552 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDG 586 (975)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDI 586 (975)
...++|+.+|+.++++|+++.+|++.+++++++||
T Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~DI 113 (113)
T PF00989_consen 79 FRLRDGRPRWVEVRASPVRDEDGQIIGILVIFRDI 113 (113)
T ss_dssp EEETTSCEEEEEEEEEEEEETTEEEEEEEEEEEE-
T ss_pred EEecCCcEEEEEEEEEEEEeCCCCEEEEEEEEEeC
Confidence 44579999999999999999999999999999998
|
PAS domains appear in archaea, bacteria and eukaryotes. Several PAS-domain proteins are known to detect their signal by way of an associated cofactor. Haeme, flavin, and a 4-hydroxycinnamyl chromophore are used in different proteins. The PAS domain was named after three proteins that it occurs in: Per- period circadian protein Arnt- Ah receptor nuclear translocator protein Sim- single-minded protein. PAS domains are often associated with PAC domains IPR001610 from INTERPRO. It appears that these domains are directly linked, and that together they form the conserved 3D PAS fold. The division between the PAS and PAC domains is caused by major differences in sequences in the region connecting these two motifs []. In human PAS kinase, this region has been shown to be very flexible, and adopts different conformations depending on the bound ligand []. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels [].; GO: 0006355 regulation of transcription, DNA-dependent; PDB: 2GJ3_A 4F3L_B 1XFN_A 1OTD_A 2PYR_A 1KOU_A 1XFQ_A 2ZOI_A 2ZOH_A 1OTA_A .... |
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.7e-13 Score=144.01 Aligned_cols=111 Identities=22% Similarity=0.265 Sum_probs=89.8
Q ss_pred ccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------c------------cccccCCeEEEEE
Q 002051 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------L------------NRNKTKTHVCLIT 721 (975)
Q Consensus 674 ~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------~------------~~~~~~~~~~lV~ 721 (975)
++.||+|++|.||+|.+ .|..+++|+...... + .........++||
T Consensus 1 ~~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~ 78 (211)
T PRK14879 1 MKLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVM 78 (211)
T ss_pred CcccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEE
Confidence 36799999999999987 677899997542210 0 0001345668999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
||++|++|.+++... .. ....++.+++.+|.+||+.|++|+|++|.|||++ ++.++|+|||.+..
T Consensus 79 e~~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 79 EYIEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEeCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 999999999998653 12 7788999999999999999999999999999999 78999999998854
|
|
| >PRK13557 histidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.4e-13 Score=163.73 Aligned_cols=151 Identities=38% Similarity=0.687 Sum_probs=129.6
Q ss_pred CcHHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEE
Q 002051 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLI 551 (975)
Q Consensus 472 ~~l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~ 551 (975)
..|+.++++++++|+++|..+.+|+|+|+|++|++++||+.+|++|+++..+.+++........++..+..+..+..++.
T Consensus 30 ~~~~~~~~~~~~~i~v~d~~~~~g~i~~~N~a~~~~~G~~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (540)
T PRK13557 30 DIFFAAVETTRMPMIVTDPNQPDNPIVFANRAFLEMTGYAAEEIIGNNCRFLQGPETDRATVAEVRDAIAERREIATEIL 109 (540)
T ss_pred HHHHHHHHhCcCcEEEEcCCCCCCCEEEEcHHHHHHhCCCHHHhcCCChHhhcCCCCCHHHHHHHHHHHHcCCCceEEEE
Confidence 34899999999999999986667779999999999999999999999998888888888888888888888888888999
Q ss_pred EEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccccccCCCcchhhHHHHHHHHHHhhhhhhhhhc
Q 002051 552 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEAVKE 622 (975)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~e~~~~~~~~~~e~~~~v~~~~~~i~~~v~~ 622 (975)
..++||+.+|+.+++.|+++.+|.+++++++.+|||++++++++.........+..++..+.|.+++++..
T Consensus 110 ~~~~~G~~~~~~~~~~~i~~~~g~~~~~~~~~~dit~~~~~e~~l~~~~~~~~l~~~~~~i~h~l~~pl~~ 180 (540)
T PRK13557 110 NYRKDGSSFWNALFVSPVYNDAGDLVYFFGSQLDVSRRRDAEDALRQAQKMEALGQLTGGIAHDFNNLLQV 180 (540)
T ss_pred EEeCCCCEEEEEEEEEEeECCCCCEEEEEEEecChHHHHHHHHHHHHHHHHHHhhhhhhhhhHHhhhHHHH
Confidence 99999999999999999999999999999999999999986655544444455556666677777766543
|
|
| >PRK13559 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=8.9e-13 Score=150.67 Aligned_cols=142 Identities=39% Similarity=0.736 Sum_probs=119.8
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~ 553 (975)
|+.++++++++++++|.++.++.|+++|++|++++||+.+|++|+++..+.++.........+...+..+..+..+...+
T Consensus 45 ~~~~~e~~~~~i~i~D~~~~~g~i~~~N~a~~~l~G~~~~e~iG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 124 (361)
T PRK13559 45 FEQAMEQTRMAMCITDPHQPDLPIVLANQAFLDLTGYAAEEVVGRNCRFLQGAATDPIAVAKIRAAIAAEREIVVELLNY 124 (361)
T ss_pred HHHHHHhCCCcEEEecCCCCCCcEEEEchHHHHHhCCCHHHHcCCChhhhcCCCCCHHHHHHHHHHhccCCceEEEEEEE
Confidence 88899999999999998665677999999999999999999999998877777777777777888888888888899999
Q ss_pred ccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccccccCCCcchhhHHHHHHHHHHhhhhhhhhh
Q 002051 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEAVK 621 (975)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~e~~~~~~~~~~e~~~~v~~~~~~i~~~v~ 621 (975)
++||+.+|+.+++.|+++.+|.+.+++++++|||++|+.++ ..+...+++..+.|.+++.+.
T Consensus 125 ~~dG~~~~~~~~~~~i~d~~G~~~~~v~~~~DITerk~~e~------~~~~~~~l~~~l~H~~~n~L~ 186 (361)
T PRK13559 125 RKDGEPFWNALHLGPVYGEDGRLLYFFGSQWDVTDIRAVRA------LEAHERRLAREVDHRSKNVFA 186 (361)
T ss_pred cCCCCEEEEEEEEEEEEcCCCCEEEeeeeeeehhcchhhHH------HHHHHHHHHHHHHHhhhhHHH
Confidence 99999999999999999999999999999999999998432 222334455556666666554
|
|
| >PRK09776 putative diguanylate cyclase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.1e-13 Score=181.20 Aligned_cols=269 Identities=10% Similarity=-0.023 Sum_probs=194.4
Q ss_pred CccceeccccccccccccCcchHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCC-CCCCCCCC
Q 002051 166 NSVRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRN-CRFLQGAG 244 (975)
Q Consensus 166 ~~~~~~~di~~~~~~e~~L~~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~-~~~l~~~~ 244 (975)
+.+....|||++|+.|+++++.++.++.+++..+++++.+|. +|+++++|+++++++||+.++..+.. +..+.+++
T Consensus 387 ~~i~~~~DITerk~~e~~l~~~~~~~~~~~~~~~~~i~~~d~---~~~~~~~n~~~~~l~G~~~~~~~~~~~~~~~~~p~ 463 (1092)
T PRK09776 387 YFIAQIEDINELKRTEQVNERLMERITLANEAGGIGIWEWDL---KPNIISWDKRMFELYEIPPHIKPTWQVWYACLHPE 463 (1092)
T ss_pred eehhhHHhhHHHHHHHHHHHHHHHHHHHHHHhcCceEEEEec---CCCeEeeCHHHHHHhCCCcccCCCHHHHHHhcCHh
Confidence 455667899999999999999999999999999999999999 99999999999999999999855433 23456667
Q ss_pred CCHHHHHHHHHHHHcCCcEEEEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHhhhcCCCCCchhh
Q 002051 245 TDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESL 324 (975)
Q Consensus 245 ~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~~~~~~l~~r~ 324 (975)
+.......+...+..+..+..+++.+++|| .+|+.....+++|++|++.+++++.+|||++|+++++++..+
T Consensus 464 d~~~~~~~~~~~~~~~~~~~~e~r~~~~dG-~~w~~~~~~~~~d~~G~~~~~ig~~~DITerk~~e~~L~~~~------- 535 (1092)
T PRK09776 464 DRQRVEKEIRDALQGRSPFKLEFRIVVKDG-VRHIRALANRVLNKDGEVERLLGINMDMTEVRQLNEALFQEK------- 535 (1092)
T ss_pred HHHHHHHHHHHHHhcCCCeeEEEEEEcCCc-eEEEEEeeEEEECCCCCEEEEEeeeeehhHHHHHHHHHHHHH-------
Confidence 777777788888899999999999999999 999999999999999999999999999999999998876311
Q ss_pred hhHHHHHHHHHHhhHHHHHHHhcC-ccccccCCCCCcccccCCCchhhhhhccccCCCCCCCCCCCCCCCCC-Cccc---
Q 002051 325 IRYDARQKEMATSSVTELVQAMKK-PRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGG-GCRT--- 399 (975)
Q Consensus 325 ~~~d~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--- 399 (975)
+.+..++....+ ....+.++...++|.......|+..++++|+...+............ ....
T Consensus 536 ------------~~l~~~l~~~~~~i~~~D~~g~i~~~N~a~~~l~G~~~~e~iG~~~~~~~~~~~~~~~~~~~~~~~~~ 603 (1092)
T PRK09776 536 ------------ERLHITLDSIGEAVVCTDMAMKVTFMNPVAEKMTGWTQEEALGVPLLTVLHITFGDNGPLMENIYSCL 603 (1092)
T ss_pred ------------HHHHHHHhccccEEEEECCCCeEEEEcHHHHHHhCCCHHHHcCCCHHHHcccccCCcchhhHHHHHHH
Confidence 111223333332 23455566777888888999999999999987765544211111000 0000
Q ss_pred --ccccccccccccccccCcccccccccccccCCCCCCcccchhhhcCCCCCCCCCCCCCchhhHHHHHHHhh
Q 002051 400 --SMQRISEVPEKKKQKSGRRSFMGLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRK 470 (975)
Q Consensus 400 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~er~~~~~~l~~ 470 (975)
....+.........++|...+...+..++...++.. .+.....+|+||+|+.+++++.
T Consensus 604 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~pi~~~~g~~-------------~g~v~~~~DITe~k~~e~~L~~ 663 (1092)
T PRK09776 604 TSRSAAYLEQDVVLHCRSGGSYDVHYSITPLSTLDGEN-------------IGSVLVIQDVTESRKMLRQLSY 663 (1092)
T ss_pred hcCCCccccceEEEEeCCCcEEEEEEEeeeeecCCCCE-------------EEEEEEEEecchHHHHHHHHHh
Confidence 000011112223456777777666665554443322 2223335899999999998865
|
|
| >PRK11091 aerobic respiration control sensor protein ArcB; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.8e-13 Score=172.35 Aligned_cols=162 Identities=12% Similarity=0.118 Sum_probs=138.0
Q ss_pred CCchhhHHHHHHHhhc-CcHHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHH
Q 002051 456 PDSVDDKVRQKEMRKG-IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVR 534 (975)
Q Consensus 456 ~d~~er~~~~~~l~~~-~~l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~ 534 (975)
+++.++++.++++++. ..++.++++++++|+++|.+|+ |++||+++++++||+.++++|++...+++++.......
T Consensus 138 ~~i~~r~~~~~~l~~~~~~l~~il~~~~~~i~~~D~~g~---i~~~N~a~~~l~G~~~~eliG~~~~~l~~~~~~~~~~~ 214 (779)
T PRK11091 138 NEIKEREETQIELEQQSSLLRSFLDASPDLVYYRNEDGE---FSGCNRAMELLTGKSEKQLIGLTPKDVYSPEAAEKVIE 214 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcceEEEECCCCc---EEeEcHHHHHHhCcCHHHHcCCChHHhCCHHHHHHHHH
Confidence 5677888877777765 5689999999999999999776 99999999999999999999999888888877777777
Q ss_pred HHHHHHHcCCcEEEEEEEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccccccCCCcchhhHHHHHHHHHHhh
Q 002051 535 KIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAE 614 (975)
Q Consensus 535 ~~~~~l~~g~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~e~~~~~~~~~~e~~~~v~~~~~ 614 (975)
.....+..+..+..+.+..++||+.+|+.++..|+++.+|.+.|++++++|||++|++++++ +.+.++....+..++|
T Consensus 215 ~~~~~~~~~~~~~~e~~~~~~~G~~~~~~~~~~pi~~~~g~~~g~v~~~~DITe~k~~e~~l--~~a~~~~~~~~a~isH 292 (779)
T PRK11091 215 TDEKVFRHNVSLTYEQWLDYPDGRKACFELRKVPFYDRVGKRHGLMGFGRDITERKRYQDAL--EKASRDKTTFISTISH 292 (779)
T ss_pred HHHHHHhcCCCeEEEEEEEcCCCCEEEEEEEeeeEEcCCCCEEEEEEEEeehhHHHHHHHHH--HHHHHHHHHHHHHhhH
Confidence 77778888888999999999999999999999999999999999999999999999855432 2333455667778888
Q ss_pred hhhhhhhc
Q 002051 615 NVNEAVKE 622 (975)
Q Consensus 615 ~i~~~v~~ 622 (975)
++++++..
T Consensus 293 elrtPL~~ 300 (779)
T PRK11091 293 ELRTPLNG 300 (779)
T ss_pred hhcCcHHH
Confidence 88877654
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.2e-13 Score=139.76 Aligned_cols=106 Identities=18% Similarity=0.254 Sum_probs=84.7
Q ss_pred ccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------ccc---------cccCCeEEEEEec
Q 002051 676 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------LNR---------NKTKTHVCLITDY 723 (975)
Q Consensus 676 ~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------~~~---------~~~~~~~~lV~Ey 723 (975)
.||+|+||.||++.. ++..+++|....... ... .......++||||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence 489999999999985 678899998543210 000 0134456899999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
++|++|.+++.... . .++.|++.+|.+||+.|++|+|++|.|||++ ++.++++|||++..
T Consensus 79 ~~g~~l~~~~~~~~---~------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 79 IEGKPLKDVIEEGN---D------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred ECCccHHHHHhhcH---H------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999999876521 0 7889999999999999999999999999999 88999999998854
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.5e-13 Score=139.69 Aligned_cols=113 Identities=22% Similarity=0.214 Sum_probs=81.9
Q ss_pred cccccccccCCceEEEEEEEeCCCeEEEEEEeccch----------------h-------------ccccccC---CeEE
Q 002051 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV----------------M-------------LNRNKTK---THVC 718 (975)
Q Consensus 671 y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~----------------~-------------~~~~~~~---~~~~ 718 (975)
+.-...||+|+||.||. +..++.. +||++.... + .....++ ..++
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 33456899999999995 7777666 699876431 0 0001122 3434
Q ss_pred -EEEec--cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHH-HHHHHCCCeecCCCCCCEEEecC----CcEEEeeccC
Q 002051 719 -LITDY--CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVAL-EYLHCQGIIYRDLKPENVLLQGN----GHVSLTDFDL 790 (975)
Q Consensus 719 -lV~Ey--~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL-~yLH~~gIiHrDIKp~NILl~~~----g~vkL~DFG~ 790 (975)
+|||| +.+|+|.+++.+. .+++. ..++.|++.++ +|||+++|+||||||+|||++.. +.++|+||+-
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G 155 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIG 155 (210)
T ss_pred EEEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence 78999 5579999999752 36665 35678888777 99999999999999999999743 3799999544
Q ss_pred C
Q 002051 791 S 791 (975)
Q Consensus 791 a 791 (975)
+
T Consensus 156 ~ 156 (210)
T PRK10345 156 E 156 (210)
T ss_pred C
Confidence 4
|
|
| >PRK13557 histidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.4e-12 Score=155.14 Aligned_cols=133 Identities=37% Similarity=0.735 Sum_probs=120.8
Q ss_pred ccCcchHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCC
Q 002051 182 KGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ 261 (975)
Q Consensus 182 ~~L~~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~ 261 (975)
+........|+.+++.++++|+++|..+.+|+|+|+|++|++++||+.+|++|+++..+.+++........++..+..+.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~g~i~~~N~a~~~~~G~~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~ 102 (540)
T PRK13557 23 DVSDHRSDIFFAAVETTRMPMIVTDPNQPDNPIVFANRAFLEMTGYAAEEIIGNNCRFLQGPETDRATVAEVRDAIAERR 102 (540)
T ss_pred hhhhhhhHHHHHHHHhCcCcEEEEcCCCCCCCEEEEcHHHHHHhCCCHHHhcCCChHhhcCCCCCHHHHHHHHHHHHcCC
Confidence 34445678999999999999999997666899999999999999999999999999988888888888888889999988
Q ss_pred cEEEEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHhhh
Q 002051 262 SYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (975)
Q Consensus 262 ~~~~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~ 314 (975)
.+..+...++++|+.+|+.+++.|+++.+|.+++++++.+|||+++++++++.
T Consensus 103 ~~~~~~~~~~~~G~~~~~~~~~~~i~~~~g~~~~~~~~~~dit~~~~~e~~l~ 155 (540)
T PRK13557 103 EIATEILNYRKDGSSFWNALFVSPVYNDAGDLVYFFGSQLDVSRRRDAEDALR 155 (540)
T ss_pred CceEEEEEEeCCCCEEEEEEEEEEeECCCCCEEEEEEEecChHHHHHHHHHHH
Confidence 88888888899999999999999999999999999999999999999987765
|
|
| >PRK11091 aerobic respiration control sensor protein ArcB; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.1e-12 Score=165.28 Aligned_cols=140 Identities=13% Similarity=0.127 Sum_probs=129.1
Q ss_pred ccccccccccccCcchHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHH
Q 002051 172 GEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVA 251 (975)
Q Consensus 172 ~di~~~~~~e~~L~~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~ 251 (975)
.+++++++.++++++.++.++.++++++++|+++|. +|+|+++|++|++++||+.++++|+++..+++++.......
T Consensus 138 ~~i~~r~~~~~~l~~~~~~l~~il~~~~~~i~~~D~---~g~i~~~N~a~~~l~G~~~~eliG~~~~~l~~~~~~~~~~~ 214 (779)
T PRK11091 138 NEIKEREETQIELEQQSSLLRSFLDASPDLVYYRNE---DGEFSGCNRAMELLTGKSEKQLIGLTPKDVYSPEAAEKVIE 214 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcceEEEECC---CCcEEeEcHHHHHHhCcCHHHHcCCChHHhCCHHHHHHHHH
Confidence 478888889999999999999999999999999999 99999999999999999999999999988888776666667
Q ss_pred HHHHHHHcCCcEEEEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHhhh
Q 002051 252 KIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (975)
Q Consensus 252 ~l~~~l~~g~~~~~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~ 314 (975)
.....+..+..+..+....++||..+|+.++..|+++.+|.+.|++++++|||++|+++++++
T Consensus 215 ~~~~~~~~~~~~~~e~~~~~~~G~~~~~~~~~~pi~~~~g~~~g~v~~~~DITe~k~~e~~l~ 277 (779)
T PRK11091 215 TDEKVFRHNVSLTYEQWLDYPDGRKACFELRKVPFYDRVGKRHGLMGFGRDITERKRYQDALE 277 (779)
T ss_pred HHHHHHhcCCCeEEEEEEEcCCCCEEEEEEEeeeEEcCCCCEEEEEEEEeehhHHHHHHHHHH
Confidence 777788888888888888999999999999999999999999999999999999999998865
|
|
| >PRK13559 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.7e-12 Score=144.72 Aligned_cols=128 Identities=40% Similarity=0.755 Sum_probs=113.6
Q ss_pred chHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEE
Q 002051 186 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG 265 (975)
Q Consensus 186 ~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~ 265 (975)
.+...++.+++.++++|+++|..+.+|+|+++|++|++++||+.+|++|+++..+.++.........+...+..+..+..
T Consensus 40 ~~~~~~~~~~e~~~~~i~i~D~~~~~g~i~~~N~a~~~l~G~~~~e~iG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (361)
T PRK13559 40 ASGRLFEQAMEQTRMAMCITDPHQPDLPIVLANQAFLDLTGYAAEEVVGRNCRFLQGAATDPIAVAKIRAAIAAEREIVV 119 (361)
T ss_pred hhhhHHHHHHHhCCCcEEEecCCCCCCcEEEEchHHHHHhCCCHHHHcCCChhhhcCCCCCHHHHHHHHHHhccCCceEE
Confidence 34566888999999999999975557889999999999999999999999988777777777777788888888888888
Q ss_pred EEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHhh
Q 002051 266 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDK 313 (975)
Q Consensus 266 e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l 313 (975)
+...+++||..+|+.+++.|+++.+|.+.+++++++|||++|+++++.
T Consensus 120 e~~~~~~dG~~~~~~~~~~~i~d~~G~~~~~v~~~~DITerk~~e~~~ 167 (361)
T PRK13559 120 ELLNYRKDGEPFWNALHLGPVYGEDGRLLYFFGSQWDVTDIRAVRALE 167 (361)
T ss_pred EEEEEcCCCCEEEEEEEEEEEEcCCCCEEEeeeeeeehhcchhhHHHH
Confidence 888899999999999999999999999999999999999999887553
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.4e-12 Score=154.51 Aligned_cols=112 Identities=21% Similarity=0.255 Sum_probs=85.7
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------h------cc------------ccccCCe
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------M------LN------------RNKTKTH 716 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------~------~~------------~~~~~~~ 716 (975)
..|...+.||+|+||+||++.+... .+++|+..... + +. .......
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 3457789999999999999987443 34444321110 0 00 0012345
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
.++||||++|++|.+++. ....++.|++.+|.|||+.|++||||||+|||+ .++.++|+|||+++.
T Consensus 411 ~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred CEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 789999999999999885 346789999999999999999999999999999 578999999999865
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.34 E-value=6.8e-12 Score=143.57 Aligned_cols=182 Identities=24% Similarity=0.338 Sum_probs=136.0
Q ss_pred ccccCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-eecCCCCCCEEEecCCcEEEeec
Q 002051 710 RNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGI-IYRDLKPENVLLQGNGHVSLTDF 788 (975)
Q Consensus 710 ~~~~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gI-iHrDIKp~NILl~~~g~vkL~DF 788 (975)
...+...+++|.+||.-|+|.|.+... ...++..-...+++.|+.||.|||.-.| .|+.++..|.+++..-.+||+||
T Consensus 15 ~~~~~~~~~~i~~~c~rGsl~D~i~~~-~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~ 93 (484)
T KOG1023|consen 15 ASVDGPEMIVIWEYCSRGSLLDILSNE-DIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDSRWVLKLTDF 93 (484)
T ss_pred eEecCCceEEEEeeecCccHHhHHhcc-ccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeeeeEEEEechh
Confidence 334558899999999999999999873 3467888888899999999999998765 99999999999999999999999
Q ss_pred cCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC-------CCChhHHHHHHHHH
Q 002051 789 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-------HTSAVDWWALGILL 861 (975)
Q Consensus 789 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-------~~~k~DIWSLG~il 861 (975)
|+......... ........-...|.|||.+.+.. .+.+.||||+|+++
T Consensus 94 Gl~~~~~~~~~-------------------------~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~ 148 (484)
T KOG1023|consen 94 GLNSLLEETAE-------------------------PEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIM 148 (484)
T ss_pred hhccccccccc-------------------------ccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHH
Confidence 99755421000 00001112345689999997742 35579999999999
Q ss_pred HHHHhCCCCCCCC----CHHHHHHHHHhcCCC--CCCC---CCCcHHHHHHHHHhcccCccccCC
Q 002051 862 YEMLYGYTPFRGK----TRQKTFANILHKDLK--FPSS---TPTSLHAKQLMYRLLHRDPKSRLG 917 (975)
Q Consensus 862 ~ell~G~~Pf~~~----~~~~~~~~i~~~~~~--~p~~---~~~s~~~~~li~~~L~~dP~~R~t 917 (975)
+|+++...||... ...+++..+.+.... .|.. ....+++..++..||..+|.+||+
T Consensus 149 ~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs 213 (484)
T KOG1023|consen 149 YEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPS 213 (484)
T ss_pred HHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCcc
Confidence 9999999999762 233455555541211 1111 134457899999999999999999
|
|
| >PRK10060 RNase II stability modulator; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=8.4e-12 Score=153.56 Aligned_cols=153 Identities=13% Similarity=0.160 Sum_probs=124.5
Q ss_pred ccccccCcchHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCC-CCCCCCHHHHHHHHHH
Q 002051 178 GGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFL-QGAGTDPEDVAKIRET 256 (975)
Q Consensus 178 ~~~e~~L~~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l-~~~~~~~~~~~~l~~~ 256 (975)
......+.....+++.+++.++++|+++|. +|+|+++|++|++++||+.+|++|+++..+ .++.........++..
T Consensus 100 ~~~~~~~~~~~~~~~~v~~~~~~gI~i~D~---~g~I~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~~~~~~~~~~~~~ 176 (663)
T PRK10060 100 PSVARDLSHGLSFAEQVVSEANSVIVILDS---RGNIQRFNRLCEEYTGLKEHDVIGQSVFKLFMSRREAAASRRNIRGF 176 (663)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCceEEEEeC---CCCEEEEcHHHHHHHCcCHHHHcCCCHHHHhCChhhHHHHHHHHHHH
Confidence 334445666777889999999999999999 999999999999999999999999997644 4555555566777788
Q ss_pred HHcCCcEEEEEEEEecCCCEEEEEEEeeeeecCCC-CEEEEEEEEeccchhhHHHHhhhc-----CCCCCchhhhhHHHH
Q 002051 257 LQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEG-KVLKFIGMQVEVSKHTEGAKDKML-----RPNGLPESLIRYDAR 330 (975)
Q Consensus 257 l~~g~~~~~e~~~~~kdG~~~w~~~~i~pi~d~~G-~v~~~v~~~rDITerk~~e~~l~~-----~~~~l~~r~~~~d~~ 330 (975)
+..+..+.++.+..+++|..+|+.....+ .+..| ...+++++.+|||++++++++++. .+++|+||..+.+..
T Consensus 177 ~~~~~~~~~e~~~~~~~G~~~~~~~~~~~-~~~~g~~~~~~i~~~~DITe~k~~e~~l~~~a~~D~LTGL~NR~~f~~~l 255 (663)
T PRK10060 177 FRSGNAYEVERWIKTRKGQRLFLFRNKFV-HSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAIQELI 255 (663)
T ss_pred HhcCCceEEEEEEEeCCCCEEEEEeeeEE-EcCCCCceEEEEEEEEechHHHHHHHHHHHHhhcCccCCCcCHHHHHHHH
Confidence 88888999999999999999998766444 44444 456788999999999999988775 488999988888877
Q ss_pred HHHH
Q 002051 331 QKEM 334 (975)
Q Consensus 331 ~~~~ 334 (975)
....
T Consensus 256 ~~~l 259 (663)
T PRK10060 256 DHAI 259 (663)
T ss_pred HHHH
Confidence 6654
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.4e-12 Score=147.20 Aligned_cols=238 Identities=22% Similarity=0.243 Sum_probs=179.2
Q ss_pred CCCccccccccc--CCceEEEEEEE--eCCCeEEEEEEeccch---------------------------hccccccCCe
Q 002051 668 LQHFRPIKPLGS--GDTGSVHLVEL--CGSGQYFAMKAMDKGV---------------------------MLNRNKTKTH 716 (975)
Q Consensus 668 ~~~y~i~~~LG~--G~fG~Vy~a~~--~~t~~~vAiK~l~~~~---------------------------~~~~~~~~~~ 716 (975)
...|.+...+|. |.+|.||.+.. ..++..+|+|.-+... ........++
T Consensus 113 ~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~ 192 (524)
T KOG0601|consen 113 DQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGI 192 (524)
T ss_pred hhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCc
Confidence 346788899999 99999999988 8889999999622110 0111226778
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHH----HHHHHHHCCCeecCCCCCCEEEecC-CcEEEeeccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVV----ALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLS 791 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~----aL~yLH~~gIiHrDIKp~NILl~~~-g~vkL~DFG~a 791 (975)
.|+-+|+| +.+|..+...- +..+++..++.++.+... ||.++|+.+++|-|+||+||++..+ ..++++|||+.
T Consensus 193 lfiqtE~~-~~sl~~~~~~~-~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v 270 (524)
T KOG0601|consen 193 LFIQTELC-GESLQSYCHTP-CNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLV 270 (524)
T ss_pred ceeeeccc-cchhHHhhhcc-cccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCccee
Confidence 99999999 78888887653 456899999999999999 9999999999999999999999998 88999999998
Q ss_pred CccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCC
Q 002051 792 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 871 (975)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf 871 (975)
..+...... ..........|...|++||.+.+. ++...||++||.++.+..++..++
T Consensus 271 ~~i~~~~~~----------------------~~~~~~~r~~~~~~Y~~ke~~~~l-~~~~~di~sl~ev~l~~~l~~~~~ 327 (524)
T KOG0601|consen 271 SKISDGNFS----------------------SVFKVSKRPEGDCIYAAKELLNGL-ATFASDIFSLGEVILEAILGSHLP 327 (524)
T ss_pred EEccCCccc----------------------cceeeeecCCCCceEeChhhhccc-cchHhhhcchhhhhHhhHhhcccc
Confidence 776543211 111122333577889999999876 788999999999999999988776
Q ss_pred CCC--CHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcc
Q 002051 872 RGK--TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 937 (975)
Q Consensus 872 ~~~--~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~ 937 (975)
... +....+.+ ..++.......+..+...+..|++.+|-.|++ .+.++.|+++......
T Consensus 328 ~~g~~~~W~~~r~---~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~----~q~~~~l~~i~s~~~~ 388 (524)
T KOG0601|consen 328 SVGKNSSWSQLRQ---GYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLT----AQILTALNVIHSKLFV 388 (524)
T ss_pred cCCCCCCcccccc---ccCchhhhcCcchhhhhHHHHhcCcchhhhhH----HHHHhccccccchhhh
Confidence 543 22222211 11121122334556667999999999999999 9999999999855443
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.5e-11 Score=131.56 Aligned_cols=110 Identities=23% Similarity=0.373 Sum_probs=82.3
Q ss_pred cccc-cCCceEEEEEEEeCCCeEEEEEEeccchh----cc-c-----c------------------------------cc
Q 002051 675 KPLG-SGDTGSVHLVELCGSGQYFAMKAMDKGVM----LN-R-----N------------------------------KT 713 (975)
Q Consensus 675 ~~LG-~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~----~~-~-----~------------------------------~~ 713 (975)
..|| .|+.|+||.+... +..++||.+....+ .. . . ..
T Consensus 37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 3577 7888888888773 67889998754211 00 0 0 01
Q ss_pred CC---eEEEEEeccCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeecc
Q 002051 714 KT---HVCLITDYCPG-GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 789 (975)
Q Consensus 714 ~~---~~~lV~Ey~~g-gsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG 789 (975)
.. ..++||||++| .+|.+++.. ..+++.. +.||+.+|.+||++||+||||||.|||++.++.++|+|||
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~---~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg 187 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQE---APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFD 187 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhc---CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECC
Confidence 11 12599999997 689988865 3455543 5789999999999999999999999999998999999999
Q ss_pred CCCc
Q 002051 790 LSCL 793 (975)
Q Consensus 790 ~a~~ 793 (975)
.+..
T Consensus 188 ~~~~ 191 (239)
T PRK01723 188 RGEL 191 (239)
T ss_pred Cccc
Confidence 8854
|
|
| >PRK13558 bacterio-opsin activator; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=7e-11 Score=146.32 Aligned_cols=128 Identities=39% Similarity=0.741 Sum_probs=115.6
Q ss_pred HHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEE
Q 002051 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRL 267 (975)
Q Consensus 188 ~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~ 267 (975)
..+++.+++.++++++++|..+.+|+|+|+|++|++++||+.++++|+++..+.++.........+...+..+..+..++
T Consensus 147 ~r~~~~~~~~~~~gi~~~d~~~~dg~i~~~N~~~~~l~G~~~eel~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~ 226 (665)
T PRK13558 147 RRLKERALDEAPVGITIADATLPDEPLIYINDAFERITGYSPDEVLGRNCRFLQGEDTNEERVAELREAIDEERPTSVEL 226 (665)
T ss_pred hHHHHHHHhcCCccEEEEcCCCCCCcEEEEcHHHHHHhCcCHHHHcCCCHHHhcCCCccHHHHHHHHHHHhcCCCeEEEE
Confidence 34567899999999999986556899999999999999999999999998888877777777778888888888889999
Q ss_pred EEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHhhhc
Q 002051 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (975)
Q Consensus 268 ~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~~ 315 (975)
+.+++||..+|+.++..|+.+.+|.+.+++++++|||++|++|++++.
T Consensus 227 ~~~~~dG~~~~~~~~~~pi~d~~G~~~~~vgi~~DITerk~~E~~L~~ 274 (665)
T PRK13558 227 RNYRKDGSTFWNQVDIAPIRDEDGTVTHYVGFQTDVTERKEAELALQR 274 (665)
T ss_pred EEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEeCcHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998773
|
|
| >TIGR02040 PpsR-CrtJ transcriptional regulator PpsR | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.5e-11 Score=142.73 Aligned_cols=134 Identities=16% Similarity=0.103 Sum_probs=100.2
Q ss_pred cceeccccccccccccCcchHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCC-hhhhcCCCCCCCCCCCCC
Q 002051 168 VRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYT-SKEVVGRNCRFLQGAGTD 246 (975)
Q Consensus 168 ~~~~~di~~~~~~e~~L~~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys-~eEliG~~~~~l~~~~~~ 246 (975)
+....||+.+++.++++ .+.|+.++++++++|+++|. +|+|+++|++|++++||+ .++++|+++..+.++...
T Consensus 234 l~~~~dit~~~~~e~~~---~~~~~~l~e~~~d~I~v~D~---~G~I~~~N~a~~~l~G~~~~~~l~G~~~~~~~~~~~~ 307 (442)
T TIGR02040 234 LCQLSPAGATQPVGDEL---SENLARLYHEAPDAIVFSDA---DGTIRGANEAFLELTDSSSLEAVRGRTLDRWLGRGGV 307 (442)
T ss_pred EEEEcccchhhhhhHHH---HHHHHHHHHhCCceEEEEcC---CCcEEehhHHHHHHhCCCChHHHcCCCHHHHhCCCcc
Confidence 34457777776555433 23699999999999999999 999999999999999997 578999997755543221
Q ss_pred HHHHHHHHHHH-HcCCcEEEEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHH
Q 002051 247 PEDVAKIRETL-QNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAK 311 (975)
Q Consensus 247 ~~~~~~l~~~l-~~g~~~~~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~ 311 (975)
. ...+...+ ..|.....+....++||+.+|+++++.|+.+.++ ..++++++|||+|++.+.
T Consensus 308 -~-~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~ve~s~~~i~~~~~--~~~~~v~rDITeR~~~~~ 369 (442)
T TIGR02040 308 -D-LRVLLSNVRRTGQVRLYATTLTGEFGAQTEVEISAAWVDQGER--PLIVLVIRDISRRLTMRD 369 (442)
T ss_pred -c-HHHHHHHHhhcCceEEEEEEEEcCCCCEEEEEEEEEEeccCCc--eEEEEEEecchhhccCCC
Confidence 1 22223333 3444444566778999999999999999976544 357889999999988853
|
This model represents the transcriptional regulator PpsR which is strictly associated with photosynthetic proteobacteria and found in photosynthetic operons. PpsR has been reported to be a repressor. These proteins contain a Helix-Turn_Helix motif of the "fis" type (pfam02954). |
| >PRK13558 bacterio-opsin activator; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.1e-10 Score=144.48 Aligned_cols=122 Identities=40% Similarity=0.752 Sum_probs=109.1
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~ 553 (975)
++.+++++++++++.|..+.++.|+|||+++++++||++++++|+++..+.+++........+...+..+..+..+++.+
T Consensus 150 ~~~~~~~~~~gi~~~d~~~~dg~i~~~N~~~~~l~G~~~eel~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 229 (665)
T PRK13558 150 KERALDEAPVGITIADATLPDEPLIYINDAFERITGYSPDEVLGRNCRFLQGEDTNEERVAELREAIDEERPTSVELRNY 229 (665)
T ss_pred HHHHHhcCCccEEEEcCCCCCCcEEEEcHHHHHHhCcCHHHHcCCCHHHhcCCCccHHHHHHHHHHHhcCCCeEEEEEEE
Confidence 56789999999999986544666999999999999999999999998888888777777777888888888899999999
Q ss_pred ccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccccccC
Q 002051 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRN 595 (975)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~e~~ 595 (975)
++||+.+|+.++..|+++.+|.+.+++++++|||++|+++++
T Consensus 230 ~~dG~~~~~~~~~~pi~d~~G~~~~~vgi~~DITerk~~E~~ 271 (665)
T PRK13558 230 RKDGSTFWNQVDIAPIRDEDGTVTHYVGFQTDVTERKEAELA 271 (665)
T ss_pred CCCCCEEEEEEEEEEEECCCCCEEEEEEEEEeCcHHHHHHHH
Confidence 999999999999999999999999999999999999985543
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.4e-11 Score=144.62 Aligned_cols=160 Identities=19% Similarity=0.269 Sum_probs=101.8
Q ss_pred CCcchhccccccccCCCCCCCCCCchHHHHhhhcccccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh
Q 002051 628 LTPEDLWANHSKVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM 707 (975)
Q Consensus 628 ~~pe~l~an~s~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~ 707 (975)
+-|+++...-+++-...|..+.......+...+.....-....|.. +.||.|++|+||+|+.+.+|+.||||+.++...
T Consensus 79 llP~~~~~eL~~Lqd~vpp~~~~~~~~~ie~elG~~~~~~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~ 157 (537)
T PRK04750 79 LFPPDIADELALLQDRVPPFDGALARAIIEKALGGPVEEWFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDIL 157 (537)
T ss_pred cCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhCCCHHHHHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchH
Confidence 3466665555555544443322222222222222221112345776 799999999999999988899999999875420
Q ss_pred --------------------------------c------------------------cccccCCeE-------------E
Q 002051 708 --------------------------------L------------------------NRNKTKTHV-------------C 718 (975)
Q Consensus 708 --------------------------------~------------------------~~~~~~~~~-------------~ 718 (975)
. ....+...+ +
T Consensus 158 ~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~V 237 (537)
T PRK04750 158 PVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETV 237 (537)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCce
Confidence 0 000022223 4
Q ss_pred EEEeccCCCCHHHHH--hhCCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC----cEEEeeccC
Q 002051 719 LITDYCPGGELFLLL--DRQPT--KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG----HVSLTDFDL 790 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l--~~~~~--~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g----~vkL~DFG~ 790 (975)
||||||.|+.|.++. ...+. ..+.+..+..++.|++ ..|++|+|+||.||+++.+| .++++|||+
T Consensus 238 LvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif-------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGi 310 (537)
T PRK04750 238 MVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF-------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGI 310 (537)
T ss_pred EEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH-------hCCeeeCCCChHHeEEecCCCCCCeEEEEecce
Confidence 999999999998753 22210 1244444445555544 58999999999999999888 999999999
Q ss_pred CCccC
Q 002051 791 SCLTS 795 (975)
Q Consensus 791 a~~~~ 795 (975)
+..++
T Consensus 311 vg~l~ 315 (537)
T PRK04750 311 VGSLN 315 (537)
T ss_pred EEECC
Confidence 86654
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.21 E-value=2e-11 Score=141.79 Aligned_cols=159 Identities=21% Similarity=0.321 Sum_probs=104.9
Q ss_pred CCCcchhccccccccCCCCCCCCCCchHHHHhhhcccc----cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEe
Q 002051 627 NLTPEDLWANHSKVVHPKPHRKDSPPWKAIQKILDSGE----QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAM 702 (975)
Q Consensus 627 n~~pe~l~an~s~~~~~~p~~~~~~~~~~~~~~~~~~~----~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l 702 (975)
.+-|+++...-+++-...|.. ++..+..++.... .-....|. .+.||.|++|+||+|+.+ +|+.||||+.
T Consensus 76 dllp~~~~~~L~~Lqd~v~p~----~~~~~~~~l~~elg~~~~~~F~~fd-~~plasaSigQVh~A~l~-~G~~VaVKv~ 149 (437)
T TIGR01982 76 DLLPADIAEELSLLQDRVPPF----DFKVARKVIEAALGGPLEELFAEFE-EKPLAAASIAQVHRARLV-DGKEVAVKVL 149 (437)
T ss_pred ccCCHHHHHHHHHHhcCCCCC----CHHHHHHHHHHHhCcCHHHHHhhCC-CcceeeeehhheEEEEec-CCCEEEEEee
Confidence 345666666666655555543 3444444333221 11112233 367999999999999974 7899999998
Q ss_pred ccchh----------------cc----------------------------------------cccc-------------
Q 002051 703 DKGVM----------------LN----------------------------------------RNKT------------- 713 (975)
Q Consensus 703 ~~~~~----------------~~----------------------------------------~~~~------------- 713 (975)
+.... .. ...+
T Consensus 150 rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~ 229 (437)
T TIGR01982 150 RPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRREAANASELGENFKNDPGVYVPEVYWDR 229 (437)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhh
Confidence 65410 00 0001
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHH-HHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCC
Q 002051 714 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVV-ALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 792 (975)
Q Consensus 714 ~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~-aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~ 792 (975)
....+|||||++|++|.++......+ .. ...++.+++. .+..+|..|++|+|+||.||+++.+|.++++|||++.
T Consensus 230 ~~~~vLvmE~i~G~~L~~~~~~~~~~-~~---~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~ 305 (437)
T TIGR01982 230 TSERVLTMEWIDGIPLSDIAALDEAG-LD---RKALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVG 305 (437)
T ss_pred cCCceEEEEeECCcccccHHHHHhcC-CC---HHHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCcEEEEeCCCee
Confidence 11236999999999998876542111 22 2345555655 4788999999999999999999999999999999987
Q ss_pred ccC
Q 002051 793 LTS 795 (975)
Q Consensus 793 ~~~ 795 (975)
.++
T Consensus 306 ~l~ 308 (437)
T TIGR01982 306 RLS 308 (437)
T ss_pred ECC
Confidence 654
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL | Back alignment and domain information |
|---|
Probab=99.17 E-value=6.1e-11 Score=140.92 Aligned_cols=116 Identities=26% Similarity=0.450 Sum_probs=105.9
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~ 553 (975)
|+.++++++++++++|.+|+ ++++|+++++++||++++++|++...+.++.........+...+..+..+..++...
T Consensus 6 ~~~i~~~~~~~i~~~d~~g~---~~~~N~~~~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (494)
T TIGR02938 6 YRQTVDQAPLAISITDLKAN---ILYANDAFTRITGYTKEEIIGKNESVLSNHTTPPEVYQALWGSLAEQKPWAGKLLNR 82 (494)
T ss_pred HHHHHHhCCceEEEECCCCc---EEEEchhheeecCCCHHHHhCCCchhhcCCCCCHHHHHHHHHHHHhCCcccceeecc
Confidence 89999999999999999777 999999999999999999999987777777777777777778888888888888889
Q ss_pred ccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCccccc
Q 002051 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 592 (975)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~ 592 (975)
+++|+.+|+..++.|+++.+|.+.+++++++|||++|++
T Consensus 83 ~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIt~~k~~ 121 (494)
T TIGR02938 83 RKDGELYLAELTVAPVLNEAGETTHFLGMHRDITELHRL 121 (494)
T ss_pred CCCccchhhheeeEEEECCCCCEEEEEEehhhhhHHHHH
Confidence 999999999999999999999999999999999999873
|
NifL is a modulator of the nitrogen fixation positive regulator protein NifA, and is therefore a negative regulator. It binds NifA. NifA and NifL are encoded by adjacent genes. |
| >PRK10060 RNase II stability modulator; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.4e-10 Score=142.93 Aligned_cols=115 Identities=17% Similarity=0.182 Sum_probs=95.6
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCc-CCCCCCHHHHHHHHHHHHcCCcEEEEEEE
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFL-QGPETDPATVRKIRAAIDNQTDVTVQLIN 552 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l-~~~~~~~~~~~~~~~~l~~g~~~~~e~~~ 552 (975)
++.++++++++|+++|.+|+ |+++|++|++++||+.+|++|+++..+ .++++.......+...+..+..|..+.+.
T Consensus 113 ~~~v~~~~~~gI~i~D~~g~---I~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 189 (663)
T PRK10060 113 AEQVVSEANSVIVILDSRGN---IQRFNRLCEEYTGLKEHDVIGQSVFKLFMSRREAAASRRNIRGFFRSGNAYEVERWI 189 (663)
T ss_pred HHHHHhhCCceEEEEeCCCC---EEEEcHHHHHHHCcCHHHHcCCCHHHHhCChhhHHHHHHHHHHHHhcCCceEEEEEE
Confidence 67789999999999999766 999999999999999999999996544 45555556667788888888899999999
Q ss_pred EccCCcEEEEEEEEeeeecCCC-CEEEEEEEeecCCccccc
Q 002051 553 YTKSGKKFWNLFHLQPMRDQKG-EVQYFIGVQLDGSEHLEP 592 (975)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~~G-~i~~~v~i~rDITerk~~ 592 (975)
.+++|+.+|+..... +.+.+| ...+++++++|||++|++
T Consensus 190 ~~~~G~~~~~~~~~~-~~~~~g~~~~~~i~~~~DITe~k~~ 229 (663)
T PRK10060 190 KTRKGQRLFLFRNKF-VHSGSGKNEIFLICSGTDITEERRA 229 (663)
T ss_pred EeCCCCEEEEEeeeE-EEcCCCCceEEEEEEEEechHHHHH
Confidence 999999999876654 444444 456788999999999873
|
|
| >TIGR00229 sensory_box PAS domain S-box | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.6e-10 Score=101.72 Aligned_cols=120 Identities=20% Similarity=0.408 Sum_probs=98.7
Q ss_pred HHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCC-cEEEEE
Q 002051 189 DIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ-SYCGRL 267 (975)
Q Consensus 189 ~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~-~~~~e~ 267 (975)
+.++.+++.++++++++|. +|+|+++|++++.++|++.++++|+.+..++++.........+...+..+. ......
T Consensus 3 ~~~~~~~~~~~~~~~~~d~---~~~i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (124)
T TIGR00229 3 ERYRAIFESSPDAIIVIDL---EGNILYVNPAFEEIFGYSAEELIGRNVLELIPEEDREEVRERIERLLEGEREPVSEER 79 (124)
T ss_pred hHHHHHHhhCCceEEEEcC---CCcEEEEchHHHHHhCCChHHhcCcchhhhcChhhhHHHHHHHHHHHcCCCCCcceEe
Confidence 5678899999999999999 999999999999999999999999998877766665555555656655332 233444
Q ss_pred EEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHh
Q 002051 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKD 312 (975)
Q Consensus 268 ~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~ 312 (975)
....++|..+|+.+...|+. .+|...++++++.|||++++++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dit~~~~~~~~ 123 (124)
T TIGR00229 80 RVRRKDGSEIWVEVSVSPIR-TNGGELGVVGIVRDITERKQAEEA 123 (124)
T ss_pred eeEcCCCCEEEEEEEEeehh-hCCCeeEEEEEeeehhHHHHHHhc
Confidence 44588999999999999998 788899999999999999988765
|
The PAS domain was previously described. This sensory box, or S-box domain occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include heme in the oxygen sensor FixL, FAD in the redox potential sensor NifL, and a 4-hydroxycinnamyl chromophore in photoactive yellow protein. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator. |
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.8e-10 Score=113.18 Aligned_cols=110 Identities=21% Similarity=0.259 Sum_probs=87.5
Q ss_pred cccccccCCceEEEEEEEeCCCeEEEEEEeccchh-------------c-----------cccccCCeEEEEEeccCCCC
Q 002051 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-------------L-----------NRNKTKTHVCLITDYCPGGE 728 (975)
Q Consensus 673 i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-------------~-----------~~~~~~~~~~lV~Ey~~ggs 728 (975)
+++.||.|.++.||++.... ..+++|....... + ......+..|++|||+.|+.
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~ 79 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET 79 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence 46789999999999999844 6899998865421 0 00013346899999998877
Q ss_pred HHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 729 LFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ---GIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 729 L~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~---gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
+..+ +......++.+++.+|.+||.. +++|+||+|.|||++..+.++++|||.+..
T Consensus 80 ~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 80 LDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 6543 4456677889999999999985 799999999999999989999999998854
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >PRK11359 cyclic-di-GMP phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.4e-10 Score=143.45 Aligned_cols=141 Identities=14% Similarity=0.183 Sum_probs=118.5
Q ss_pred ccceeccccccccccccCcchHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCC-CCCC
Q 002051 167 SVRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQ-GAGT 245 (975)
Q Consensus 167 ~~~~~~di~~~~~~e~~L~~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~-~~~~ 245 (975)
.+....|||++++.++ ....+..+++.++++++++|. +|+|+++|+++++++||+.++++|+++..+. ++..
T Consensus 118 ~~~~~~DiT~~~~~~~----~~~~~~~~~~~~~~~i~~~d~---~g~i~~~N~~~~~l~G~~~~e~~g~~~~~~~~~~~~ 190 (799)
T PRK11359 118 YLALVRDASVEMAQKE----QTRQLIIAVDHLDRPVIVLDP---ERRIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEF 190 (799)
T ss_pred EEEEEeeccchhhhHH----HHHHHHHHHhcCCCcEEEEcC---CCcEEEEChhhHhhhCCCHHHHCCCChHHhcCCCCC
Confidence 4566689998765544 445667889999999999999 9999999999999999999999999977554 4445
Q ss_pred CHHHHHHHHHHHHcCCcEEEEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHhhh
Q 002051 246 DPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (975)
Q Consensus 246 ~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~ 314 (975)
.......+...+..+..+..+.+..+++|..+|+.++..|+.+.+|.+.+++++.+|||+++++++..+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~v~d~~g~~~~~~~~~~DITerk~~e~~~~ 259 (799)
T PRK11359 191 PADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEG 259 (799)
T ss_pred cHHHHHHHHHhhccCCCCcceeEEeCCCCCEEEEEeeeeeeecCCCceeEEEEEeehhhhHHHHHHHHH
Confidence 555666677777777778888888999999999999999999999999999999999999998876543
|
|
| >PF08447 PAS_3: PAS fold; InterPro: IPR013655 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs [] | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.6e-10 Score=100.26 Aligned_cols=86 Identities=29% Similarity=0.408 Sum_probs=74.6
Q ss_pred eeecCHHHHHHcCCChhhhcCCC----CCCcCCCCCCHHHHHHHHH-HHHcCCcEEEEEEEEccCCcEEEEEEEEeeeec
Q 002051 497 IIFASDSFLELTEYSREEILGRN----CRFLQGPETDPATVRKIRA-AIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRD 571 (975)
Q Consensus 497 I~~vN~a~~~l~Gy~~eEllG~~----~~~l~~~~~~~~~~~~~~~-~l~~g~~~~~e~~~~~kdG~~~wv~~~~~pi~d 571 (975)
|+|||+++++++||+++++ |.. +..++||++...+.+.+.. .+..+..+..+++++++||+.+|++.+..+++|
T Consensus 1 ~i~~s~~~~~i~G~~~~~~-~~~~~~~~~~~ihpdD~~~~~~~~~~~~~~~~~~~~~e~R~~~~~G~~~wi~~~~~~~~d 79 (91)
T PF08447_consen 1 IIYWSDNFYEIFGYSPEEI-GKPDFEEWLERIHPDDRERVRQAIQQAALQNGEPFEIEYRIRRKDGEYRWIEVRGRPIFD 79 (91)
T ss_dssp -EEE-THHHHHHTS-HHHH-TCBEHHHHHHHB-TTTHHHHHHHHHHHHHHTT-EEEEEEEEEGTTSTEEEEEEEEEEEET
T ss_pred CEEEeHHHHHHhCCCHHHh-ccCCHHHHHhhcCHHHHHHHHHHHHHHhhccCcceEEEEEEECCCCCEEEEEEEEEEEEC
Confidence 6899999999999999999 766 6778999999999999999 788888999999999999999999999999999
Q ss_pred CCCCEEEEEEEe
Q 002051 572 QKGEVQYFIGVQ 583 (975)
Q Consensus 572 ~~G~i~~~v~i~ 583 (975)
.+|.++.++|++
T Consensus 80 ~~g~~~~~~Gv~ 91 (91)
T PF08447_consen 80 ENGKPIRIIGVI 91 (91)
T ss_dssp TTS-EEEEEEEE
T ss_pred CCCCEEEEEEEC
Confidence 999999999974
|
The PAS fold appears in archaea, eubacteria and eukarya. The PAS domain contains a sensory box, or S-box domain that occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include haem in the oxygen sensor FixL [], FAD in the redox potential sensor NifL [], and a 4-hydroxycinnamyl chromophore in photoactive yellow protein []. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator. This domain has been found in the gene product of the madA gene of the filamentous zygomycete fungus Phycomyces blakesleeanus. It has been shown that MadA encodes a blue-light photoreceptor for phototropism and other light responses. The gene is involved in the phototropic responses associated with sporangiophore growth; they exhibit phototropism by bending toward near-UV and blue wavelengths and away from far-UV wavelengths in a manner that is physiologically similar to plant phototropic responses [].; GO: 0005515 protein binding; PDB: 3NJA_D 3H9W_A 3GDI_B 3ICY_A 3EEH_A 3MR0_B. |
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.06 E-value=7.8e-10 Score=113.40 Aligned_cols=117 Identities=15% Similarity=0.137 Sum_probs=84.9
Q ss_pred ccccccCCceEEEEEEEeC------CCeEEEEEEeccchh--------c--c-c----c--c------------------
Q 002051 674 IKPLGSGDTGSVHLVELCG------SGQYFAMKAMDKGVM--------L--N-R----N--K------------------ 712 (975)
Q Consensus 674 ~~~LG~G~fG~Vy~a~~~~------t~~~vAiK~l~~~~~--------~--~-~----~--~------------------ 712 (975)
...||.|.-+.||.|.... .+..+|||+++-... + . + . .
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 4579999999999998643 357999998764310 0 0 0 0 0
Q ss_pred -------------cCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHH-HHCCCeecCCCCCCEEEe
Q 002051 713 -------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYL-HCQGIIYRDLKPENVLLQ 778 (975)
Q Consensus 713 -------------~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yL-H~~gIiHrDIKp~NILl~ 778 (975)
.-..-+|||||+.+..+..-..+. ..++...+..+..+++.+|..| |..||||+||++.|||+.
T Consensus 82 rl~~~Gv~vP~pi~~~~~~lvME~Ig~~~~~~~~Lkd--~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~ 159 (197)
T cd05146 82 RMQKAGIPCPEVVVLKKHVLVMSFIGDDQVPAPKLKD--AKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWH 159 (197)
T ss_pred HHHHcCCCCCeEEEecCCEEEEEEcCCCCccchhhhc--cccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEE
Confidence 123347999999665443222221 2355667778889999999999 899999999999999997
Q ss_pred cCCcEEEeeccCCCc
Q 002051 779 GNGHVSLTDFDLSCL 793 (975)
Q Consensus 779 ~~g~vkL~DFG~a~~ 793 (975)
++.+.|+|||.|..
T Consensus 160 -~~~v~iIDF~qav~ 173 (197)
T cd05146 160 -DGKVWFIDVSQSVE 173 (197)
T ss_pred -CCcEEEEECCCcee
Confidence 57899999998854
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >TIGR00229 sensory_box PAS domain S-box | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.5e-09 Score=98.33 Aligned_cols=115 Identities=22% Similarity=0.351 Sum_probs=95.6
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcC-CcEEEEEEE
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQ-TDVTVQLIN 552 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g-~~~~~e~~~ 552 (975)
++.++++++++++++|.+|. ++++|+++++++|++.++++|.....+.++.........+...+..+ .....+...
T Consensus 5 ~~~~~~~~~~~~~~~d~~~~---i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (124)
T TIGR00229 5 YRAIFESSPDAIIVIDLEGN---ILYVNPAFEEIFGYSAEELIGRNVLELIPEEDREEVRERIERLLEGEREPVSEERRV 81 (124)
T ss_pred HHHHHhhCCceEEEEcCCCc---EEEEchHHHHHhCCChHHhcCcchhhhcChhhhHHHHHHHHHHHcCCCCCcceEeee
Confidence 78899999999999999766 99999999999999999999998777777766666655666666533 234445555
Q ss_pred EccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCccccc
Q 002051 553 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 592 (975)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~ 592 (975)
..++|..+|+..+..|+. .+|...+++++++|||++++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dit~~~~~ 120 (124)
T TIGR00229 82 RRKDGSEIWVEVSVSPIR-TNGGELGVVGIVRDITERKQA 120 (124)
T ss_pred EcCCCCEEEEEEEEeehh-hCCCeeEEEEEeeehhHHHHH
Confidence 689999999999999998 788899999999999999773
|
The PAS domain was previously described. This sensory box, or S-box domain occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include heme in the oxygen sensor FixL, FAD in the redox potential sensor NifL, and a 4-hydroxycinnamyl chromophore in photoactive yellow protein. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator. |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.3e-10 Score=133.08 Aligned_cols=227 Identities=23% Similarity=0.290 Sum_probs=164.8
Q ss_pred cccCCCcccccccccCCceEEEEEEEe-CCCeEEEEEEeccchhc---------------------------cccccCCe
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELC-GSGQYFAMKAMDKGVML---------------------------NRNKTKTH 716 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~-~t~~~vAiK~l~~~~~~---------------------------~~~~~~~~ 716 (975)
.....+|..+..||.|.|+.|+.+... .++..|++|-+.+.... ......++
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~ 340 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQ 340 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccc
Confidence 345678999999999999999998765 67889999976654211 11113456
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC-CcEEEeeccCCCccC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLTS 795 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~-g~vkL~DFG~a~~~~ 795 (975)
.||-.|||.++++...+.- ...+.+...+.+..|++.++.++|+..++|+|+||+||++..+ +..++.|||.+..+.
T Consensus 341 ~~ip~e~~~~~s~~l~~~~--~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~ 418 (524)
T KOG0601|consen 341 GYIPLEFCEGGSSSLRSVT--SQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLA 418 (524)
T ss_pred ccCchhhhcCcchhhhhHH--HHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccccc
Confidence 7799999999988765532 2457888999999999999999999999999999999999986 778999999875422
Q ss_pred CCCCCCCCcchhhhhccCCCCCccccccccccccccc-CCCCc-cchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFV-GTEEY-IAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 873 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gt~~y-~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~ 873 (975)
.. ..... ++..| .++.......+..++|++|||..+++.+++.+.-..
T Consensus 419 ~~------------------------------~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~ 468 (524)
T KOG0601|consen 419 FS------------------------------SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSES 468 (524)
T ss_pred ee------------------------------cccccccccccccchhhccccccccccccccccccccccccCcccCcc
Confidence 11 01112 23334 355555667788899999999999999998765322
Q ss_pred CCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCcc
Q 002051 874 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932 (975)
Q Consensus 874 ~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~ 932 (975)
.. ....+..+.. |.......++..+.+.++..++..|+. +.++..|.-|.
T Consensus 469 ~~---~~~~i~~~~~--p~~~~~~~~~q~~~kv~~~~~~~~~~l----~~~l~~~~~~~ 518 (524)
T KOG0601|consen 469 GV---QSLTIRSGDT--PNLPGLKLQLQVLLKVMINPDRKRRPS----AVELSLHSEFY 518 (524)
T ss_pred cc---cceeeecccc--cCCCchHHhhhhhhhhhcCCccccchh----hhhhcccchhh
Confidence 11 1222333322 222333478889999999999999999 88887776553
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.2e-09 Score=115.40 Aligned_cols=195 Identities=23% Similarity=0.295 Sum_probs=133.6
Q ss_pred cCCeEEEEEeccCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHC--CCeecCCCCCCEEEecCCcEEEeec
Q 002051 713 TKTHVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQ--GIIYRDLKPENVLLQGNGHVSLTDF 788 (975)
Q Consensus 713 ~~~~~~lV~Ey~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qIl~aL~yLH~~--gIiHrDIKp~NILl~~~g~vkL~DF 788 (975)
+...+.+++|||..|+|..+|++ .....+....-++++-||+.||.|||+. -|+|+++..+-|++..+|-+|+.--
T Consensus 143 e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ 222 (458)
T KOG1266|consen 143 EKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSV 222 (458)
T ss_pred cccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEeccc
Confidence 45678899999999999999976 2334688888999999999999999998 4999999999999998887776421
Q ss_pred cCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCC
Q 002051 789 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGY 868 (975)
Q Consensus 789 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~ 868 (975)
. .-...+... .+ .........+-+.|.+||.=.....+.++|||++|....+|..+.
T Consensus 223 a---p~s~h~s~~--~~------------------~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailE 279 (458)
T KOG1266|consen 223 A---PDSTHPSVN--ST------------------REAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILE 279 (458)
T ss_pred C---ccccchhhh--hh------------------hHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHhe
Confidence 1 100000000 00 001111234567888998665555667899999999999998876
Q ss_pred CCCC-CCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchh
Q 002051 869 TPFR-GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 939 (975)
Q Consensus 869 ~Pf~-~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~ 939 (975)
.--. +.+....-..+.+-.+.+. +..-++++.+||+-.|..||+ +.++|.||-.-++.-.++
T Consensus 280 iq~tnseS~~~~ee~ia~~i~~le-----n~lqr~~i~kcl~~eP~~rp~----ar~llfHpllfeVhslkl 342 (458)
T KOG1266|consen 280 IQSTNSESKVEVEENIANVIIGLE-----NGLQRGSITKCLEGEPNGRPD----ARLLLFHPLLFEVHSLKL 342 (458)
T ss_pred eccCCCcceeehhhhhhhheeecc-----CccccCcCcccccCCCCCCcc----hhhhhcCceeeecchHHH
Confidence 5422 2221111112211111111 112347899999999999999 999999999888766543
|
|
| >PF08447 PAS_3: PAS fold; InterPro: IPR013655 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs [] | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.3e-09 Score=96.23 Aligned_cols=86 Identities=28% Similarity=0.453 Sum_probs=74.0
Q ss_pred eEeccHHHHHHhCCChhhhcCCC----CCCCCCCCCCHHHHHHHHH-HHHcCCcEEEEEEEEecCCCEEEEEEEeeeeec
Q 002051 214 IMYASAGFFKMTGYTSKEVVGRN----CRFLQGAGTDPEDVAKIRE-TLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKD 288 (975)
Q Consensus 214 I~~~N~a~~~l~Gys~eEliG~~----~~~l~~~~~~~~~~~~l~~-~l~~g~~~~~e~~~~~kdG~~~w~~~~i~pi~d 288 (975)
|+|+|+++++++||+++++ |.. +..+++|++.......+.. .+..+..+..+++.+++||+.+|++.+..+++|
T Consensus 1 ~i~~s~~~~~i~G~~~~~~-~~~~~~~~~~~ihpdD~~~~~~~~~~~~~~~~~~~~~e~R~~~~~G~~~wi~~~~~~~~d 79 (91)
T PF08447_consen 1 IIYWSDNFYEIFGYSPEEI-GKPDFEEWLERIHPDDRERVRQAIQQAALQNGEPFEIEYRIRRKDGEYRWIEVRGRPIFD 79 (91)
T ss_dssp -EEE-THHHHHHTS-HHHH-TCBEHHHHHHHB-TTTHHHHHHHHHHHHHHTT-EEEEEEEEEGTTSTEEEEEEEEEEEET
T ss_pred CEEEeHHHHHHhCCCHHHh-ccCCHHHHHhhcCHHHHHHHHHHHHHHhhccCcceEEEEEEECCCCCEEEEEEEEEEEEC
Confidence 6899999999999999999 766 5678899999999999999 788888999999999999999999999999999
Q ss_pred CCCCEEEEEEEE
Q 002051 289 DEGKVLKFIGMQ 300 (975)
Q Consensus 289 ~~G~v~~~v~~~ 300 (975)
++|+++.++|+.
T Consensus 80 ~~g~~~~~~Gv~ 91 (91)
T PF08447_consen 80 ENGKPIRIIGVI 91 (91)
T ss_dssp TTS-EEEEEEEE
T ss_pred CCCCEEEEEEEC
Confidence 999999999874
|
The PAS fold appears in archaea, eubacteria and eukarya. The PAS domain contains a sensory box, or S-box domain that occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include haem in the oxygen sensor FixL [], FAD in the redox potential sensor NifL [], and a 4-hydroxycinnamyl chromophore in photoactive yellow protein []. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator. This domain has been found in the gene product of the madA gene of the filamentous zygomycete fungus Phycomyces blakesleeanus. It has been shown that MadA encodes a blue-light photoreceptor for phototropism and other light responses. The gene is involved in the phototropic responses associated with sporangiophore growth; they exhibit phototropism by bending toward near-UV and blue wavelengths and away from far-UV wavelengths in a manner that is physiologically similar to plant phototropic responses [].; GO: 0005515 protein binding; PDB: 3NJA_D 3H9W_A 3GDI_B 3ICY_A 3EEH_A 3MR0_B. |
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=98.91 E-value=3.2e-09 Score=107.34 Aligned_cols=106 Identities=26% Similarity=0.356 Sum_probs=79.6
Q ss_pred ccccccCCceEEEEEEEeCCCeEEEEEEeccchh--cccc--------------------ccCCeEEEEEeccCCCCHHH
Q 002051 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--LNRN--------------------KTKTHVCLITDYCPGGELFL 731 (975)
Q Consensus 674 ~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--~~~~--------------------~~~~~~~lV~Ey~~ggsL~~ 731 (975)
++.|+.|.++.||++... +..|++|+...... .... .....-++||||++|.++..
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~~~lv~e~i~G~~l~~ 80 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDPETGVLITEFIEGSELLT 80 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeCCCCeEEEEecCCCcccc
Confidence 457899999999999874 77899998755420 0000 02223579999999987754
Q ss_pred HHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-----eecCCCCCCEEEecCCcEEEeeccCCC
Q 002051 732 LLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGI-----IYRDLKPENVLLQGNGHVSLTDFDLSC 792 (975)
Q Consensus 732 ~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gI-----iHrDIKp~NILl~~~g~vkL~DFG~a~ 792 (975)
.. .....++.+++.+|..||+.++ +|+|++|.||+++ ++.++++|||.+.
T Consensus 81 ~~----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 81 ED----------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred cc----------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 30 1123456789999999999985 9999999999999 6789999999884
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >PRK11073 glnL nitrogen regulation protein NR(II); Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=3.1e-09 Score=120.76 Aligned_cols=141 Identities=13% Similarity=0.168 Sum_probs=107.8
Q ss_pred cHHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEE
Q 002051 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 552 (975)
Q Consensus 473 ~l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~ 552 (975)
.++.++++++++++++|.+|+ |+++|+++++++||+.++++|+++..+.++.. .....+...+..+..+..+...
T Consensus 8 ~~~~il~~~~~gi~~~d~~~~---i~~~N~a~~~~~g~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 82 (348)
T PRK11073 8 DAGQILNSLINSILLLDDDLA---IHYANPAAQQLLAQSSRKLFGTPLPELLSYFS--LNIELMRESLQAGQGFTDNEVT 82 (348)
T ss_pred hHHHHHhcCcCeEEEECCCCe---EeeEcHHHHHHhCCCHHHHcCCCHHHHcCcch--hhHHHHHHHHHcCCcccccceE
Confidence 489999999999999999666 99999999999999999999999877765432 2223445566666655544455
Q ss_pred EccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccccccCCCcchhhHHHHHHHHHHhhhhhhhhhcC
Q 002051 553 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEAVKEL 623 (975)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~e~~~~~~~~~~e~~~~v~~~~~~i~~~v~~l 623 (975)
..+||+.+|+.++.+|+. . .+++..++|||++++.+++............++..++|++++++..+
T Consensus 83 ~~~~g~~~~~~~~~~~~~--~---~~~~~~~~dit~~~~~~~~~~~~~~~~~~~~~~~~iaHelr~pL~~i 148 (348)
T PRK11073 83 LVIDGRSHILSLTAQRLP--E---GMILLEMAPMDNQRRLSQEQLQHAQQVAARDLVRGLAHEIKNPLGGL 148 (348)
T ss_pred EEECCceEEEEEEEEEcc--C---ceeEEEEechhHHHHHHHHHHHHHHHHHHHHHHHhhhHhhcChHHHH
Confidence 668999999999999997 2 34677899999998865555444445555667778888888877643
|
|
| >PRK11360 sensory histidine kinase AtoS; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=1e-08 Score=125.02 Aligned_cols=144 Identities=15% Similarity=0.146 Sum_probs=114.1
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCc-EEEEEEE
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD-VTVQLIN 552 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~-~~~e~~~ 552 (975)
++.++++++++++++|.+|. |+++|+++++++||+.++++|+++..++++.. .....+...+..+.. ...++..
T Consensus 264 ~~~i~~~~~~~i~~~d~~g~---i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 338 (607)
T PRK11360 264 NELILESIADGVIAIDRQGK---ITTMNPAAEVITGLQRHELVGKPYSELFPPNT--PFASPLLDTLEHGTEHVDLEISF 338 (607)
T ss_pred HHHHHHhccCeEEEEcCCCC---EEEECHHHHHHhCCChHHhcCCcHHHHcCCch--hHHHHHHHHHhcCCCccceEEEE
Confidence 78899999999999999766 99999999999999999999999887776542 233444555555444 4456777
Q ss_pred EccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccccccCCCcchhhHHHHHHHHHHhhhhhhhhhcC
Q 002051 553 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEAVKEL 623 (975)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~e~~~~~~~~~~e~~~~v~~~~~~i~~~v~~l 623 (975)
.+++|..+ +.++..|++|.+|++.+++++++|||++|+++.+....+....+.+.+..+.|++++++..+
T Consensus 339 ~~~~~~~~-~~~~~~~i~~~~g~~~~~i~~~~Dite~~~~e~~l~~~~~~~~l~~~~~~~~hel~~~l~~i 408 (607)
T PRK11360 339 PGRDRTIE-LSVSTSLLHNTHGEMIGALVIFSDLTERKRLQRRVARQERLAALGELVAGVAHEIRNPLTAI 408 (607)
T ss_pred EcCCCcEE-EEEEEeeEEcCCCCEEEEEEEEeechHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 78888876 99999999999999999999999999999976655555555555566777778877766543
|
|
| >COG3829 RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.3e-08 Score=113.57 Aligned_cols=221 Identities=17% Similarity=0.178 Sum_probs=153.0
Q ss_pred HHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEe
Q 002051 192 KDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYK 271 (975)
Q Consensus 192 ~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~ 271 (975)
+.+++.++++++++|. ...|.++|..+..+++-....++|+++..+.+.-.-+... .++.+........
T Consensus 4 ~~~l~~~~~~~~vi~~---~~~~~~~~~~a~~~~~~~~~~~i~~~~~~i~~~~~~~~v~--------~~~~~~~~~~~~~ 72 (560)
T COG3829 4 EGILKSILDGPVVIDK---NTGIDVANALALAKRQKNAEAVIGRPLREILETLGMERVE--------QSRDKELTERLKL 72 (560)
T ss_pred hhhhhhcccceEEEEc---CCceeeechHHHHhhhcceEEEecccceeeccccCcceee--------ccCccceeeeeec
Confidence 4488999999999998 7889999999999999999999999988666554332221 2222222222223
Q ss_pred cCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHhhhcCCCCCchhhhhHHHHHHHHHHhhHHHHHHHhcCccc
Q 002051 272 KDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRS 351 (975)
Q Consensus 272 kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~~~~~~l~~r~~~~d~~~~~~~~~~~~~l~~~~~~~~~ 351 (975)
+ + . -.-+.-.++.++.|+++|+++++.|+++....-++.
T Consensus 73 ~-~-~-~~~~~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~~~-------------------------------------- 111 (560)
T COG3829 73 K-V-K-RIVVVGKTPVDEQGRVVGVLEVFLDISEALELIEEN-------------------------------------- 111 (560)
T ss_pred c-c-e-eEEEcCCceeecCCceeeeehhhhhhHHHHHHHHHH--------------------------------------
Confidence 3 3 2 222333445678899999999999999843332221
Q ss_pred cccCCCCCcccccCCCchhhhhhccccCCCCCCCCCCCCCCCCCCcccccccccccccccccccCcccccccccccccCC
Q 002051 352 LSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFMGLIGRKSQST 431 (975)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (975)
T Consensus 112 -------------------------------------------------------------------------------- 111 (560)
T COG3829 112 -------------------------------------------------------------------------------- 111 (560)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcccchhhhcCCCCCCCCCCCCCchhhHHHHHHHhhcCcHHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCC
Q 002051 432 DDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYS 511 (975)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~er~~~~~~l~~~~~l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~ 511 (975)
.+.+. ..|+.+++.+.++++++|..|+ ++++|.++..++|++
T Consensus 112 ------------------------------l~~~~-----~~l~~il~~~~~~l~vvD~~G~---~i~~N~~~~~~~gl~ 153 (560)
T COG3829 112 ------------------------------LRQLR-----QRLEAILDSIDDGLLVVDEDGI---IIYYNKAYAKLLGLS 153 (560)
T ss_pred ------------------------------HHHHH-----HHHHHHHhhccCceEEEcCCCc---EEEEcHHHHHHhCCC
Confidence 00011 1189999999999999999777 999999999999999
Q ss_pred hhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccc
Q 002051 512 REEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (975)
Q Consensus 512 ~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~ 591 (975)
.++++|++...+...... ....+++..+.+.......+..++. ..+..|++ .+|.+.|.+++.+|+++-++
T Consensus 154 ~e~~~gk~~~~v~~~~~~----s~~l~vl~~~kp~~~~~~~~~~~~~----i~~~~pv~-~~g~l~G~v~~~~~~~~l~~ 224 (560)
T COG3829 154 PEEVLGKHLLDVVSAGED----STLLEVLRTGKPIRDVVQTYNGNKI----IVNVAPVY-ADGQLIGVVGISKDVSELER 224 (560)
T ss_pred HHHHcCCcHHHHHhccCC----ceehhhhhcCCcceeeeeeecCCce----eEeeccEe-cCCcEEEEEEeecchHHHHH
Confidence 999999987666511111 2334566777765554443332222 45556776 46799999999999998754
|
|
| >cd00130 PAS PAS domain; PAS motifs appear in archaea, eubacteria and eukarya | Back alignment and domain information |
|---|
Probab=98.83 E-value=8e-08 Score=82.48 Aligned_cols=103 Identities=27% Similarity=0.422 Sum_probs=89.4
Q ss_pred ccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEccCCcEE
Q 002051 481 IEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKF 560 (975)
Q Consensus 481 ~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~~kdG~~~ 560 (975)
++++++++|.+|. ++++|+++++++|++.++++|.....+++++........+...+..+..+..++.....+|..+
T Consensus 1 ~~~~i~~~d~~~~---~~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (103)
T cd00130 1 LPDGVIVLDLDGR---ILYANPAAEQLLGYSPEELIGKSLLDLIHPEDREELRERLENLLSGGEPVTLEVRLRRKDGSVI 77 (103)
T ss_pred CCceEEEECCCCc---EEEECHHHHHHhCCCHHHHcCccHHHhcCCccchHHHHHHHHHHhcCcCeEEEEEEEccCCCEE
Confidence 3678999998666 9999999999999999999999987788877777766677777666667778888888999999
Q ss_pred EEEEEEeeeecCCCCEEEEEEEeecC
Q 002051 561 WNLFHLQPMRDQKGEVQYFIGVQLDG 586 (975)
Q Consensus 561 wv~~~~~pi~d~~G~i~~~v~i~rDI 586 (975)
|+.+...++.+..|...+++++.+||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~di 103 (103)
T cd00130 78 WVLVSLTPIRDEGGEVIGLLGVVRDI 103 (103)
T ss_pred EEEEEEEEEecCCCCEEEEEEEEecC
Confidence 99999999999888999999999986
|
Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in signal transduction. |
| >cd00130 PAS PAS domain; PAS motifs appear in archaea, eubacteria and eukarya | Back alignment and domain information |
|---|
Probab=98.82 E-value=8.1e-08 Score=82.46 Aligned_cols=103 Identities=24% Similarity=0.479 Sum_probs=88.4
Q ss_pred ccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCCEE
Q 002051 198 FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPF 277 (975)
Q Consensus 198 ~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~ 277 (975)
++++++++|. +|.++++|++++.++|++.++++|+++..++++.........+...+..+.....+......+|...
T Consensus 1 ~~~~i~~~d~---~~~~~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (103)
T cd00130 1 LPDGVIVLDL---DGRILYANPAAEQLLGYSPEELIGKSLLDLIHPEDREELRERLENLLSGGEPVTLEVRLRRKDGSVI 77 (103)
T ss_pred CCceEEEECC---CCcEEEECHHHHHHhCCCHHHHcCccHHHhcCCccchHHHHHHHHHHhcCcCeEEEEEEEccCCCEE
Confidence 3678999999 9999999999999999999999999987777777666666667676666666777778888889999
Q ss_pred EEEEEeeeeecCCCCEEEEEEEEecc
Q 002051 278 WNLLTIAPIKDDEGKVLKFIGMQVEV 303 (975)
Q Consensus 278 w~~~~i~pi~d~~G~v~~~v~~~rDI 303 (975)
|+.+...++.+..|...+++++.+||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~di 103 (103)
T cd00130 78 WVLVSLTPIRDEGGEVIGLLGVVRDI 103 (103)
T ss_pred EEEEEEEEEecCCCCEEEEEEEEecC
Confidence 99999999999888999999999886
|
Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in signal transduction. |
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.78 E-value=4.7e-09 Score=121.82 Aligned_cols=170 Identities=19% Similarity=0.306 Sum_probs=122.5
Q ss_pred HHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCccccccccccc
Q 002051 750 AAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRAS 828 (975)
Q Consensus 750 ~~qIl~aL~yLH~~-gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (975)
+.+...|+.|+|.. ++||++|.|++|.++.+|.+||+.|+.+..........+.. ......
T Consensus 105 l~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~------------------yd~~lp 166 (700)
T KOG2137|consen 105 LGNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSE------------------YDPPLP 166 (700)
T ss_pred hhcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCcccccc------------------CCCCCC
Confidence 44566999999965 99999999999999999999999999875543322111110 001111
Q ss_pred ccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHh--cCCCCCCCCCCcHHHHHHHH
Q 002051 829 NSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMY 905 (975)
Q Consensus 829 ~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell-~G~~Pf~~~~~~~~~~~i~~--~~~~~p~~~~~s~~~~~li~ 905 (975)
....-...|.|||++.+...+.++|+||+||++|.+. .|+..|........+..-.. +...+-....++.++++=|.
T Consensus 167 ~~~~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~ 246 (700)
T KOG2137|consen 167 LLLQPHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLK 246 (700)
T ss_pred hhhccCcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHH
Confidence 2233467899999999988899999999999999999 66666665443332222111 11112223567889999999
Q ss_pred HhcccCccccCCChhhHHHHHcCCCccCCCcchhhc
Q 002051 906 RLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRC 941 (975)
Q Consensus 906 ~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~ 941 (975)
++|..++..||+ +.+++..|||.+.-...++.
T Consensus 247 k~l~~~~~~rp~----~~~l~~~~ff~D~~~~aLrf 278 (700)
T KOG2137|consen 247 KLLNGDSAVRPT----LDLLLSIPFFSDPGLKALRF 278 (700)
T ss_pred HHhcCCcccCcc----hhhhhcccccCCchhhhhhh
Confidence 999999999998 99999999999876655543
|
|
| >TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.8e-08 Score=111.47 Aligned_cols=114 Identities=14% Similarity=0.114 Sum_probs=89.7
Q ss_pred cchHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEE
Q 002051 185 PRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYC 264 (975)
Q Consensus 185 ~~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~ 264 (975)
.+..+.|+.+++.++++|+++|. +|+|+++|++|++++||+.++++|+++..+..+ ..++..+..+.. .
T Consensus 2 ~~~~~~l~~~~~~~~~~i~~~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~-------~~~~~~l~~~~~-~ 70 (333)
T TIGR02966 2 SALLSRFRAAAQALPDAVVVLDE---EGQIEWCNPAAERLLGLRWPDDLGQRITNLIRH-------PEFVEYLAAGRF-S 70 (333)
T ss_pred hhHHHHHHHHHHhCcCcEEEECC---CCcEEEEcHHHHHHhCCChHHHcCCcHHHHccC-------HHHHHHHHhccc-C
Confidence 45567899999999999999999 999999999999999999999999998766543 223344444332 2
Q ss_pred EEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHhhh
Q 002051 265 GRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (975)
Q Consensus 265 ~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~ 314 (975)
.......++|..+|+.+.+.|+.+.. ++++++|||++++.++.++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~p~~~~~-----~~~~~~dit~~~~~~~~~~ 115 (333)
T TIGR02966 71 EPLELPSPINSERVLEIRIAPYGEEQ-----KLLVARDVTRLRRLEQMRR 115 (333)
T ss_pred CCeEeecCCCCceEEEEEEEEcCCCc-----eEEEEeCchHHHHHHHHHH
Confidence 23445568999999999999987542 6788999999998876644
|
Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154). |
| >KOG0501 consensus K+-channel KCNQ [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.73 E-value=6.6e-08 Score=107.83 Aligned_cols=120 Identities=27% Similarity=0.603 Sum_probs=103.5
Q ss_pred HHHHHHhcc--Cc-EEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCC--CCCcCCCCCCHHHHHHHHHHHHcCCcEEE
Q 002051 474 LATTLERIE--KN-FVITDPRLPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAAIDNQTDVTV 548 (975)
Q Consensus 474 l~~i~e~~~--d~-i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~--~~~l~~~~~~~~~~~~~~~~l~~g~~~~~ 548 (975)
++.++..+. |. +++.+.+--|++|+|+|+.||++.||.+.|++.++ +.+++++-.+....+.+++.+.+.+.-+.
T Consensus 16 LENiiRRsn~~dtsFlL~NAQiVD~PiVY~NdgFcKlsGY~RAevMQKs~tc~FMyGEltdk~ti~k~~~t~eN~~~~qf 95 (971)
T KOG0501|consen 16 LENIIRRSNNADTSFLLANAQIVDWPIVYCNDGFCKLSGYHRAEVMQKSCTCSFMYGELTDKGTIEKVRQTLENYETNQF 95 (971)
T ss_pred HHHHHhhccCCCcceeeccceeeccceEEecCcchhccCccHHHHhcccceeeeeeccccchhhHHHHHHHHHhhhhcce
Confidence 556664433 44 44445555588899999999999999999999998 56677888888889999999999999999
Q ss_pred EEEEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccccc
Q 002051 549 QLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (975)
Q Consensus 549 e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~e 593 (975)
|+-+..|+.+.+|..+.+.||+|+...++-|++.++|||.-|++.
T Consensus 96 EillyKKN~TPvW~~vqiAPIrNe~d~VVLfLctFkDIT~~KQPi 140 (971)
T KOG0501|consen 96 EILLYKKNRTPVWLLVQIAPIRNEKDKVVLFLCTFKDITALKQPI 140 (971)
T ss_pred eeEeeecCCCceEEEEEeecccCCCceEEEEEeecccchhhcCCC
Confidence 999999999999999999999999999999999999999999864
|
|
| >TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR | Back alignment and domain information |
|---|
Probab=98.73 E-value=4.5e-08 Score=109.85 Aligned_cols=125 Identities=10% Similarity=0.052 Sum_probs=93.4
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~ 553 (975)
|+.++++++++|+++|.+|+ |++||++|++++||++++++|+++..+.+++ .+...+..+.. ...+...
T Consensus 8 l~~~~~~~~~~i~~~d~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~-------~~~~~l~~~~~-~~~~~~~ 76 (333)
T TIGR02966 8 FRAAAQALPDAVVVLDEEGQ---IEWCNPAAERLLGLRWPDDLGQRITNLIRHP-------EFVEYLAAGRF-SEPLELP 76 (333)
T ss_pred HHHHHHhCcCcEEEECCCCc---EEEEcHHHHHHhCCChHHHcCCcHHHHccCH-------HHHHHHHhccc-CCCeEee
Confidence 89999999999999999777 9999999999999999999999977665432 23333333332 3335566
Q ss_pred ccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccccccCCCcchhhHHHHHHHHHHhhhhhhhhhcC
Q 002051 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEAVKEL 623 (975)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~e~~~~~~~~~~e~~~~v~~~~~~i~~~v~~l 623 (975)
.++|..+|+.++..|+.+.+ ++++++|||++++.+ +....+...+.|.+++++..+
T Consensus 77 ~~~~~~~~~~~~~~p~~~~~-----~~~~~~dit~~~~~~---------~~~~~~~~~l~h~l~~pL~~i 132 (333)
T TIGR02966 77 SPINSERVLEIRIAPYGEEQ-----KLLVARDVTRLRRLE---------QMRRDFVANVSHELRTPLTVL 132 (333)
T ss_pred cCCCCceEEEEEEEEcCCCc-----eEEEEeCchHHHHHH---------HHHHHHHHhhhhhhcccHHHH
Confidence 68999999999999997643 678899999987622 223345666667776665543
|
Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154). |
| >PRK11073 glnL nitrogen regulation protein NR(II); Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=5.8e-08 Score=110.32 Aligned_cols=117 Identities=17% Similarity=0.213 Sum_probs=93.2
Q ss_pred HHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEE
Q 002051 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRL 267 (975)
Q Consensus 188 ~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~ 267 (975)
...++++++++++|++++|. +|+|+++|++|++++||+.++++|+++..+.+... .....+...+..+..+....
T Consensus 6 ~~~~~~il~~~~~gi~~~d~---~~~i~~~N~a~~~~~g~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 80 (348)
T PRK11073 6 LPDAGQILNSLINSILLLDD---DLAIHYANPAAQQLLAQSSRKLFGTPLPELLSYFS--LNIELMRESLQAGQGFTDNE 80 (348)
T ss_pred cchHHHHHhcCcCeEEEECC---CCeEeeEcHHHHHHhCCCHHHHcCCCHHHHcCcch--hhHHHHHHHHHcCCcccccc
Confidence 34679999999999999999 99999999999999999999999999887765432 22344556666666555444
Q ss_pred EEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHhhh
Q 002051 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (975)
Q Consensus 268 ~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~ 314 (975)
..+.+||..+|+.++..|+. . .+++..++|||++++.++++.
T Consensus 81 ~~~~~~g~~~~~~~~~~~~~--~---~~~~~~~~dit~~~~~~~~~~ 122 (348)
T PRK11073 81 VTLVIDGRSHILSLTAQRLP--E---GMILLEMAPMDNQRRLSQEQL 122 (348)
T ss_pred eEEEECCceEEEEEEEEEcc--C---ceeEEEEechhHHHHHHHHHH
Confidence 55678999999999999986 2 245677999999998877654
|
|
| >PF13596 PAS_10: PAS domain; PDB: 3CAX_A 2QKP_D | Back alignment and domain information |
|---|
Probab=98.71 E-value=5.5e-08 Score=90.26 Aligned_cols=106 Identities=16% Similarity=0.282 Sum_probs=75.5
Q ss_pred HHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002051 191 VKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNY 270 (975)
Q Consensus 191 l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~ 270 (975)
+..++++++.+++++|. +++|.++|+++.++++... ..+|+++..+.++...... ..+.+.+..|+....+...
T Consensus 1 L~~il~s~~~~i~~vD~---~~~I~~~n~~a~~~f~~~~-~~iGr~l~~~~~~~~~~~l-~~~i~~~~~~~~~~~~~~~- 74 (106)
T PF13596_consen 1 LNNILDSMPIGIIFVDR---NLRIRYFNPAAARLFNLSP-SDIGRPLFDIHPPLSYPNL-KKIIEQVRSGKEEEFEIVI- 74 (106)
T ss_dssp HHHHHHHSSSEEEEEET---TSBEEEE-SCGC-SS---G-GGTTSBCCCSS-HHHHHHH-HHHHHHHHTTSBSEEEEEE-
T ss_pred ChHHHhcCCCCEEEEcC---CCeEEEeChhHhhhcCCCh-HHCCCCHHHcCCccchHHH-HHHHHHHHcCCCceEEEEe-
Confidence 46789999999999999 9999999999999999765 5689999988877444443 3444556666653333332
Q ss_pred ecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccc
Q 002051 271 KKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (975)
Q Consensus 271 ~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDIT 304 (975)
..+|. |+.+++.|+++.+|+..|++.++.|||
T Consensus 75 ~~~~~--~~~~~~~P~~~~~g~~~G~v~~~~DIT 106 (106)
T PF13596_consen 75 PNGGR--WYLVRYRPYRDEDGEYAGAVITFQDIT 106 (106)
T ss_dssp EETTE--EEEEEEEEEE-TTS-EEEEEEEEEE-G
T ss_pred cCCCE--EEEEEEEEEECCCCCEEEEEEEEEecC
Confidence 35554 778899999999999999999999998
|
|
| >PRK11360 sensory histidine kinase AtoS; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=7.7e-08 Score=117.34 Aligned_cols=128 Identities=13% Similarity=0.121 Sum_probs=105.3
Q ss_pred ccCcchHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCC
Q 002051 182 KGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ 261 (975)
Q Consensus 182 ~~L~~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~ 261 (975)
+.+......++.+++.++++++++|. +|+|+++|+++++++||+.++++|+++..++++.. .....+...+..+.
T Consensus 255 ~~l~~~~~~~~~i~~~~~~~i~~~d~---~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~ 329 (607)
T PRK11360 255 QALRETRSLNELILESIADGVIAIDR---QGKITTMNPAAEVITGLQRHELVGKPYSELFPPNT--PFASPLLDTLEHGT 329 (607)
T ss_pred HHHHHHHHHHHHHHHhccCeEEEEcC---CCCEEEECHHHHHHhCCChHHhcCCcHHHHcCCch--hHHHHHHHHHhcCC
Confidence 34566667889999999999999999 99999999999999999999999999887776542 23344555566555
Q ss_pred cE-EEEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHhhhc
Q 002051 262 SY-CGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (975)
Q Consensus 262 ~~-~~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~~ 315 (975)
.. ..+....+++|... +.++..|+.+.+|++.+++++++|||+++++|++++.
T Consensus 330 ~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~g~~~~~i~~~~Dite~~~~e~~l~~ 383 (607)
T PRK11360 330 EHVDLEISFPGRDRTIE-LSVSTSLLHNTHGEMIGALVIFSDLTERKRLQRRVAR 383 (607)
T ss_pred CccceEEEEEcCCCcEE-EEEEEeeEEcCCCCEEEEEEEEeechHHHHHHHHHHH
Confidence 43 34566667888776 8899999999999999999999999999999988763
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.3e-07 Score=93.28 Aligned_cols=119 Identities=20% Similarity=0.243 Sum_probs=87.8
Q ss_pred cccccccCCceEEEEEEEeCCCeEEEEEEe-ccc----hh---------------cc------------ccccCCeEEEE
Q 002051 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAM-DKG----VM---------------LN------------RNKTKTHVCLI 720 (975)
Q Consensus 673 i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l-~~~----~~---------------~~------------~~~~~~~~~lV 720 (975)
.+..|-+|+-+.|+++.+ .|+.+.||.= .|. .+ +. ...+...-+|+
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY 88 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence 567788999999999987 6888888842 111 00 00 00134445799
Q ss_pred EeccCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc---EEEeeccCCCc
Q 002051 721 TDYCPG-GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH---VSLTDFDLSCL 793 (975)
Q Consensus 721 ~Ey~~g-gsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~---vkL~DFG~a~~ 793 (975)
|||++| .++.+++...-...........++..|-+.+.-||.++|||+||..+||++..+|. +.++|||++..
T Consensus 89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 999966 47888887653344444444788999999999999999999999999999987653 58999999843
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.64 E-value=5.3e-07 Score=104.67 Aligned_cols=124 Identities=22% Similarity=0.348 Sum_probs=91.1
Q ss_pred ccccccCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeecCCCCCCEEEecCCcEEEe
Q 002051 708 LNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH-CQGIIYRDLKPENVLLQGNGHVSLT 786 (975)
Q Consensus 708 ~~~~~~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH-~~gIiHrDIKp~NILl~~~g~vkL~ 786 (975)
+......+++|||+|-+. -|..+++. +....+...++||+.||.||| ..+++|++|.-+.|+++..|..||+
T Consensus 75 L~t~e~~~~~ylvTErV~--Pl~~~lk~-----l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLg 147 (690)
T KOG1243|consen 75 LDTTEEEGTLYLVTERVR--PLETVLKE-----LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLG 147 (690)
T ss_pred hhhhcccCceEEEeeccc--cHHHHHHH-----hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEe
Confidence 344457789999999983 57777876 346777788999999999998 5789999999999999999999999
Q ss_pred eccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh
Q 002051 787 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY 866 (975)
Q Consensus 787 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~ 866 (975)
+|.++......+. ......---.|..|+.+.... ...|.|-|||++++++.
T Consensus 148 gle~v~~~~~~~~---------------------------~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~n 198 (690)
T KOG1243|consen 148 GLELVSKASGFNA---------------------------PAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFN 198 (690)
T ss_pred eeEEEeccccCCc---------------------------ccccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhC
Confidence 9998754331110 001111122355565443322 35799999999999999
Q ss_pred C
Q 002051 867 G 867 (975)
Q Consensus 867 G 867 (975)
|
T Consensus 199 g 199 (690)
T KOG1243|consen 199 G 199 (690)
T ss_pred c
Confidence 8
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.9e-07 Score=92.68 Aligned_cols=107 Identities=21% Similarity=0.259 Sum_probs=78.0
Q ss_pred cccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------c------------cccccCCeEEEEEe
Q 002051 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------L------------NRNKTKTHVCLITD 722 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------~------------~~~~~~~~~~lV~E 722 (975)
..+++|+-+.+|.+.. -|..+++|.=.+..+ + -...+...-.|+||
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me 79 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME 79 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence 4688999999999866 344577774221110 0 00115566679999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
|++|..|.+++... . ..++..+-.-+.-||..||+|+||.++||++...+ +.++|||++..
T Consensus 80 ~I~G~~lkd~l~~~-----~----~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 80 YIEGELLKDALEEA-----R----PDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred EeCChhHHHHHHhc-----c----hHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 99998899898763 2 33455666677889999999999999999998664 99999999854
|
|
| >PF13596 PAS_10: PAS domain; PDB: 3CAX_A 2QKP_D | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.3e-07 Score=87.69 Aligned_cols=106 Identities=20% Similarity=0.317 Sum_probs=73.9
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~ 553 (975)
+..++++++.+++++|.+++ |.+.|+++.++|+... ..+|++...+.++.........+.. +..|+....+...
T Consensus 1 L~~il~s~~~~i~~vD~~~~---I~~~n~~a~~~f~~~~-~~iGr~l~~~~~~~~~~~l~~~i~~-~~~~~~~~~~~~~- 74 (106)
T PF13596_consen 1 LNNILDSMPIGIIFVDRNLR---IRYFNPAAARLFNLSP-SDIGRPLFDIHPPLSYPNLKKIIEQ-VRSGKEEEFEIVI- 74 (106)
T ss_dssp HHHHHHHSSSEEEEEETTSB---EEEE-SCGC-SS---G-GGTTSBCCCSS-HHHHHHHHHHHHH-HHTTSBSEEEEEE-
T ss_pred ChHHHhcCCCCEEEEcCCCe---EEEeChhHhhhcCCCh-HHCCCCHHHcCCccchHHHHHHHHH-HHcCCCceEEEEe-
Confidence 46789999999999999776 9999999999999864 5689999888776444444444444 4455543333333
Q ss_pred ccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCC
Q 002051 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (975)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDIT 587 (975)
..+|. |+.+++.|++|++|+..|++.++.|||
T Consensus 75 ~~~~~--~~~~~~~P~~~~~g~~~G~v~~~~DIT 106 (106)
T PF13596_consen 75 PNGGR--WYLVRYRPYRDEDGEYAGAVITFQDIT 106 (106)
T ss_dssp EETTE--EEEEEEEEEE-TTS-EEEEEEEEEE-G
T ss_pred cCCCE--EEEEEEEEEECCCCCEEEEEEEEEecC
Confidence 25555 678899999999999999999999998
|
|
| >PF12860 PAS_7: PAS fold | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.5e-07 Score=88.81 Aligned_cols=105 Identities=20% Similarity=0.275 Sum_probs=75.5
Q ss_pred HHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhh-cCCCCCCCC---------CCCCCHHHHHHHHHHHHcCCcEE
Q 002051 195 LSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEV-VGRNCRFLQ---------GAGTDPEDVAKIRETLQNGQSYC 264 (975)
Q Consensus 195 ld~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEl-iG~~~~~l~---------~~~~~~~~~~~l~~~l~~g~~~~ 264 (975)
|+++++||+++|. +|+++++|++|.+++|++.+.+ .|.++..++ ++.....................
T Consensus 1 Ld~l~~Gv~v~D~---~~rl~~~N~~~~~l~~~~~~~~~~G~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (115)
T PF12860_consen 1 LDSLPQGVAVFDS---DGRLVFWNQRFRELFGLPPEMLRPGASFRDLLRRLAERGEFPPGDPEAWVRQRLARLRRRQPRS 77 (115)
T ss_pred CCCcCceEEEEcC---CCeEEeEcHHHHHHhCCCHHHhcCCCCHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcCCCce
Confidence 4789999999999 9999999999999999999998 788855321 22222333334333344444433
Q ss_pred EEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHH
Q 002051 265 GRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAK 311 (975)
Q Consensus 265 ~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~ 311 (975)
.+ ....||. |++++..|+ ++| |+|.++.|||+++++|+
T Consensus 78 ~~--~~~~dgr--~l~~~~~~~--~~G---g~v~~~~DVT~~~~~E~ 115 (115)
T PF12860_consen 78 FE--LRLPDGR--WLEVRAQPL--PDG---GFVLTFTDVTERRRAEE 115 (115)
T ss_pred eE--EECCCCE--EEEEEeEEC--CCC---CEEEEEEeCCHHHHhcC
Confidence 33 3467886 778888888 456 56789999999999874
|
|
| >PRK11388 DNA-binding transcriptional regulator DhaR; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.5e-06 Score=106.75 Aligned_cols=105 Identities=16% Similarity=0.199 Sum_probs=77.3
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~ 553 (975)
+..+++++.++|+++|.+|+ |+++|+++++++|++.++++|++...+++.. ..+..++..+..+.......
T Consensus 205 ~~~il~~~~~gVl~vD~~G~---I~~~N~aa~~llg~s~~~l~G~~i~~l~~~~------~~l~~vl~~~~~~~~~~~~l 275 (638)
T PRK11388 205 LNALLESMDDGVIAWDEQGN---LQFLNAQAARLLRLDATASQGRAITELLTLP------AVLQQAIKQAHPLKHVEVTF 275 (638)
T ss_pred HHHHHhccCCcEEEECCCCe---EehhhHHHHHHhCcCHHHHCCCcHHHHhccc------hHHHHHHhcCCceeeEEEEE
Confidence 56688999999999999777 9999999999999999999999977665321 12344556666544333333
Q ss_pred ccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcc
Q 002051 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEH 589 (975)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITer 589 (975)
..+|..+++.+++.|+.+..| .+++.+.+|++..
T Consensus 276 ~~~g~~~~~~v~~~Pi~~~~g--~~~v~~l~~~~~~ 309 (638)
T PRK11388 276 ESQGQFIDAVITLKPIIEGQG--TSFILLLHPVEQM 309 (638)
T ss_pred ecCCceEEEEEEEEeecccCc--eEEEEEehhhHHH
Confidence 456888889999999975444 3356666777654
|
|
| >PF12860 PAS_7: PAS fold | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.2e-07 Score=87.53 Aligned_cols=104 Identities=22% Similarity=0.268 Sum_probs=74.0
Q ss_pred HHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhh-cCCCCCCcC---------CCCCCHHHHHHHHHHHHcCCcEE
Q 002051 478 LERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEI-LGRNCRFLQ---------GPETDPATVRKIRAAIDNQTDVT 547 (975)
Q Consensus 478 ~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEl-lG~~~~~l~---------~~~~~~~~~~~~~~~l~~g~~~~ 547 (975)
++++++||+++|.+|+ +++||++|.+++|++.+.+ .|.++..++ .+.....................
T Consensus 1 Ld~l~~Gv~v~D~~~r---l~~~N~~~~~l~~~~~~~~~~G~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (115)
T PF12860_consen 1 LDSLPQGVAVFDSDGR---LVFWNQRFRELFGLPPEMLRPGASFRDLLRRLAERGEFPPGDPEAWVRQRLARLRRRQPRS 77 (115)
T ss_pred CCCcCceEEEEcCCCe---EEeEcHHHHHHhCCCHHHhcCCCCHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcCCCce
Confidence 4689999999999777 9999999999999999998 787754432 22333333333333344444333
Q ss_pred EEEEEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccccc
Q 002051 548 VQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (975)
Q Consensus 548 ~e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~e 593 (975)
. .....||. |++++..|+- +| |++.++.|||++|++|
T Consensus 78 ~--~~~~~dgr--~l~~~~~~~~--~G---g~v~~~~DVT~~~~~E 114 (115)
T PF12860_consen 78 F--ELRLPDGR--WLEVRAQPLP--DG---GFVLTFTDVTERRRAE 114 (115)
T ss_pred e--EEECCCCE--EEEEEeEECC--CC---CEEEEEEeCCHHHHhc
Confidence 3 34567887 6688888884 45 5788999999999844
|
|
| >KOG3558 consensus Hypoxia-inducible factor 1/Neuronal PAS domain protein NPAS1 [Signal transduction mechanisms; Transcription] | Back alignment and domain information |
|---|
Probab=98.51 E-value=9.4e-07 Score=101.54 Aligned_cols=93 Identities=19% Similarity=0.234 Sum_probs=85.1
Q ss_pred eeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEccCCcEEEEEEEEeeeecC-CCC
Q 002051 497 IIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQ-KGE 575 (975)
Q Consensus 497 I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~~kdG~~~wv~~~~~pi~d~-~G~ 575 (975)
|+||.+.+.+++||+++||+|+.+..|+|+.|...+.+.....+..|....+.+++.-|+|..+|++...+.|.+. +++
T Consensus 286 ityCedRisdlm~y~PeeLvGrS~Ye~~Ha~Ds~~v~KSh~dL~~KGQv~TgyYR~lak~GGyvWlQTqATVi~~tkn~q 365 (768)
T KOG3558|consen 286 ITYCEDRISDLMDYEPEELVGRSCYEFVHALDSDRVRKSHHDLLTKGQVVTGYYRLLAKNGGYVWLQTQATVIYNTKNPQ 365 (768)
T ss_pred EEEEchhHHHHhcCCHHHhhchhHHHhhhHhhhhHHHHHHHHHHhcCccchhHHHHHHhcCCeEEEEeeeEEEecCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999874 445
Q ss_pred EEEEEEEeecCCcc
Q 002051 576 VQYFIGVQLDGSEH 589 (975)
Q Consensus 576 i~~~v~i~rDITer 589 (975)
-..+|++.-=|+.+
T Consensus 366 ~q~IicVnYVlS~~ 379 (768)
T KOG3558|consen 366 EQNIICVNYVLSNI 379 (768)
T ss_pred cceEEEEEeeeccc
Confidence 57778877777776
|
|
| >KOG0501 consensus K+-channel KCNQ [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.45 E-value=5e-07 Score=101.03 Aligned_cols=120 Identities=32% Similarity=0.639 Sum_probs=101.5
Q ss_pred HHHHHHHhcc--C-cEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCC--CCCCCCCCHHHHHHHHHHHHcCCcEE
Q 002051 190 IVKDALSTFQ--Q-TFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCR--FLQGAGTDPEDVAKIRETLQNGQSYC 264 (975)
Q Consensus 190 ~l~~ild~~~--d-~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~--~l~~~~~~~~~~~~l~~~l~~g~~~~ 264 (975)
+|+.++..+. | .+++.++.-.|..|+|.|+.||.+.||.++|++.+++. +...+..+....+.+++.+.+-+.-.
T Consensus 15 FLENiiRRsn~~dtsFlL~NAQiVD~PiVY~NdgFcKlsGY~RAevMQKs~tc~FMyGEltdk~ti~k~~~t~eN~~~~q 94 (971)
T KOG0501|consen 15 FLENIIRRSNNADTSFLLANAQIVDWPIVYCNDGFCKLSGYHRAEVMQKSCTCSFMYGELTDKGTIEKVRQTLENYETNQ 94 (971)
T ss_pred HHHHHHhhccCCCcceeeccceeeccceEEecCcchhccCccHHHHhcccceeeeeeccccchhhHHHHHHHHHhhhhcc
Confidence 4555555544 3 33433443347789999999999999999999999865 66677778889999999999999999
Q ss_pred EEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHH
Q 002051 265 GRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEG 309 (975)
Q Consensus 265 ~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~ 309 (975)
+|+..++|+-.++|+.+.+.||+++...++-|++.++|||..|+-
T Consensus 95 fEillyKKN~TPvW~~vqiAPIrNe~d~VVLfLctFkDIT~~KQP 139 (971)
T KOG0501|consen 95 FEILLYKKNRTPVWLLVQIAPIRNEKDKVVLFLCTFKDITALKQP 139 (971)
T ss_pred eeeEeeecCCCceEEEEEeecccCCCceEEEEEeecccchhhcCC
Confidence 999999999999999999999999999999999999999988874
|
|
| >COG2202 AtoS FOG: PAS/PAC domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.1e-05 Score=80.49 Aligned_cols=114 Identities=27% Similarity=0.343 Sum_probs=87.6
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHH--HHHHHHHHHHcCCcEEEEEE
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPA--TVRKIRAAIDNQTDVTVQLI 551 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~--~~~~~~~~l~~g~~~~~e~~ 551 (975)
++.++++++++++++|.+|. ++++|+++++++||+..+.++.....+........ .................+..
T Consensus 114 ~~~~~~~~~~~~~~~d~~~~---~~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (232)
T COG2202 114 LRALLEASPDGIWVLDEDGR---ILYANPAAEELLGYSPEEELGRGLSDLIHPEDEERRELELARALAEGRGGPLEIEYR 190 (232)
T ss_pred HHHHHhhCCceEEEEeCCCC---EEEeCHHHHHHhCCChHHhcCCChhheEecCCCchhhHHHHHHhhccCCCCcceEEE
Confidence 78889999999999998666 99999999999999988888877555544333221 11122222233345778889
Q ss_pred EEccCCcE-EEEEEEEeeeecCCCCEEEEEEEeecCCcccc
Q 002051 552 NYTKSGKK-FWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (975)
Q Consensus 552 ~~~kdG~~-~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~ 591 (975)
...++|.. .|+...+.+..+ .|.+..+.+...|+|++++
T Consensus 191 ~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~ 230 (232)
T COG2202 191 VRRKDGERVRWILSRISPVRD-DGEIVGVVGIARDITERKQ 230 (232)
T ss_pred EEecCCCEEEEEEeeeeEecC-CCceEEEEEEEechHHHhh
Confidence 99999996 888888888765 7899999999999999876
|
|
| >PRK11086 sensory histidine kinase DcuS; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=2.7e-05 Score=94.08 Aligned_cols=132 Identities=14% Similarity=0.184 Sum_probs=87.5
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCC---hhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEE
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYS---REEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQL 550 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~---~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~ 550 (975)
++.++++++++|+++|.+|+ |+++|+++++++|++ ..+.+|+....+.+.. .+...+..+.......
T Consensus 223 ~~~il~~~~~gIi~~D~~g~---I~~~N~~a~~llg~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 292 (542)
T PRK11086 223 RQAMLQSIKEGVIAVDDRGE---VTLINDEAKRLFNYKKGLEDDPLGTDVESWMPVS-------RLKEVLRTGTPRRDEE 292 (542)
T ss_pred HHHHHHHhcCcEEEECCCCe---EEEEhHHHHHHhCCCcCCcccccCCcHHHhCCch-------hHHHHHhcCCCccceE
Confidence 68899999999999999777 999999999999876 3466777655554422 2344455555433221
Q ss_pred EEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccccccCCCcchhhHHHHHHHHHHhhhhhhhhhcC
Q 002051 551 INYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEAVKEL 623 (975)
Q Consensus 551 ~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~e~~~~~~~~~~e~~~~v~~~~~~i~~~v~~l 623 (975)
...+|. ++.+...|+.+ +|.+.|++.+++|+|+.++.+++ ..........++...|++++++..+
T Consensus 293 --~~~~g~--~~~~~~~pi~~-~g~~~g~v~~~rDite~~~l~~~---l~~~~~~~~~l~~~sHel~npL~~I 357 (542)
T PRK11086 293 --ININGR--LLLTNTVPVRV-NGEIIGAIATFRDKTEVRQLAQR---LDGMVNYADALRAQSHEFMNKLHVI 357 (542)
T ss_pred --EEECCE--EEEEEEEEEeE-CCEEEEEEEEEEEchHHHHHHHH---HHHHHHHHHHHHhhchhhcCHHHHH
Confidence 123454 44566789998 89999999999999998763221 1112222333455567776665543
|
|
| >PRK11006 phoR phosphate regulon sensor protein; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=4.8e-07 Score=106.08 Aligned_cols=141 Identities=13% Similarity=0.163 Sum_probs=94.7
Q ss_pred CCchhhHHHHHHHhhc-CcHHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHH
Q 002051 456 PDSVDDKVRQKEMRKG-IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVR 534 (975)
Q Consensus 456 ~d~~er~~~~~~l~~~-~~l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~ 534 (975)
+++.+.++.++++++. ..|+.++++++++|+++|.+|+ |++||++|++++||+.++++|++...+..+++ +..
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~d~~g~---i~~~N~~a~~l~g~~~~~~~g~~~~~~~~~~~---~~~ 154 (430)
T PRK11006 81 QMQLRNRKRRRELGNLIKRFRSGAESLPDAVVLTTEEGN---IFWCNGLAQQLLGFRWPEDNGQNILNLLRYPE---FTQ 154 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCCCc---eeHHHHHHHHHhCCCChHhCCCcHHHHhcCHH---HHH
Confidence 3455555555555554 5699999999999999999766 99999999999999999999998766554321 111
Q ss_pred HHHHHHHcCCcEEEEEEEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccccccCCCcchhhHHHHHHHHHHhh
Q 002051 535 KIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAE 614 (975)
Q Consensus 535 ~~~~~l~~g~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~e~~~~~~~~~~e~~~~v~~~~~ 614 (975)
. +... ...........+|. ++.+++.|..+ + +++.+++|||++++.+ +.....+..++|
T Consensus 155 ~----~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~--~---~~~~~~~dit~~~~~e---------~~~~~~~~~isH 213 (430)
T PRK11006 155 Y----LKTR-DFSRPLTLVLNNGR--HLEIRVMPYTE--G---QLLMVARDVTQMHQLE---------GARRNFFANVSH 213 (430)
T ss_pred H----HHhc-ccCCCeEEEcCCCC--EEEEEEEEcCC--C---cEEEEEehhhHHHHHH---------HHHHHHHHHhHH
Confidence 1 1111 11222333455665 45666777653 3 2567889999987622 233456777788
Q ss_pred hhhhhhhcC
Q 002051 615 NVNEAVKEL 623 (975)
Q Consensus 615 ~i~~~v~~l 623 (975)
++++++..+
T Consensus 214 elrtPL~~i 222 (430)
T PRK11006 214 ELRTPLTVL 222 (430)
T ss_pred HhcchHHHH
Confidence 888776643
|
|
| >COG3829 RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.2e-06 Score=99.87 Aligned_cols=144 Identities=18% Similarity=0.335 Sum_probs=105.9
Q ss_pred cccCCCCCccceecccccccccccc-CcchHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCC
Q 002051 159 TSRRNSNNSVRSSGEMSDEGGKEKG-LPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNC 237 (975)
Q Consensus 159 ~~~~~~~~~~~~~~di~~~~~~e~~-L~~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~ 237 (975)
.+.....|.+..+.|+++..+.-+. |......|+.+++.+.++++++|. +|+++++|+++..++|++.++++|+++
T Consensus 86 ~~~~~~~g~~~~~~~~~e~~~~~~~~l~~~~~~l~~il~~~~~~l~vvD~---~G~~i~~N~~~~~~~gl~~e~~~gk~~ 162 (560)
T COG3829 86 DEQGRVVGVLEVFLDISEALELIEENLRQLRQRLEAILDSIDDGLLVVDE---DGIIIYYNKAYAKLLGLSPEEVLGKHL 162 (560)
T ss_pred ecCCceeeeehhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEcC---CCcEEEEcHHHHHHhCCCHHHHcCCcH
Confidence 3344455666677787765543333 466678899999999999999999 999999999999999999999999987
Q ss_pred CCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHhhh
Q 002051 238 RFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (975)
Q Consensus 238 ~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~ 314 (975)
..+.....+ ....+++..+++.......+..++. -.+..|+. .+|.+.|.|++++|+++.+.+..+++
T Consensus 163 ~~v~~~~~~----s~~l~vl~~~kp~~~~~~~~~~~~~----i~~~~pv~-~~g~l~G~v~~~~~~~~l~~l~~~~~ 230 (560)
T COG3829 163 LDVVSAGED----STLLEVLRTGKPIRDVVQTYNGNKI----IVNVAPVY-ADGQLIGVVGISKDVSELERLTRELE 230 (560)
T ss_pred HHHHhccCC----ceehhhhhcCCcceeeeeeecCCce----eEeeccEe-cCCcEEEEEEeecchHHHHHHHHHHH
Confidence 765521111 2334677888876665554333332 34556665 56799999999999999988887765
|
|
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.39 E-value=2.9e-06 Score=93.16 Aligned_cols=215 Identities=20% Similarity=0.285 Sum_probs=143.4
Q ss_pred ccccccccCCceEEEEEEEeCCCeEEEEEEeccchh------------------ccc----------c-ccCCeEEEEEe
Q 002051 672 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM------------------LNR----------N-KTKTHVCLITD 722 (975)
Q Consensus 672 ~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~------------------~~~----------~-~~~~~~~lV~E 722 (975)
...+.||+|+.+.+|-.-... ..+-|++.+.-. ... . .....+-++|.
T Consensus 14 ~~gr~LgqGgea~ly~l~e~~---d~VAKIYh~Pppa~~aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP 90 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEVR---DQVAKIYHAPPPAAQAQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMP 90 (637)
T ss_pred CCCccccCCccceeeecchhh---chhheeecCCCchHHHHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEecc
Confidence 456789999999999654322 245677654310 000 0 02233678898
Q ss_pred ccCCCC-HHHHHh----hCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 723 YCPGGE-LFLLLD----RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 723 y~~ggs-L~~~l~----~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
.++|.. +.++.. ++.+..+....+...++.|+.+.+-||..|.+-+|++++|+|+++++.|.|.|-..- .+.
T Consensus 91 ~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsf-qi~-- 167 (637)
T COG4248 91 KVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSF-QIN-- 167 (637)
T ss_pred cCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccce-eec--
Confidence 887753 233321 234455778889999999999999999999999999999999999999999984321 111
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhc-----CCCCCChhHHHHHHHHHHHHHhC-CCCC
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYG-YTPF 871 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~~~k~DIWSLG~il~ell~G-~~Pf 871 (975)
.+.......+|...|.+||.-. +..-+...|.|.||+++++++.| ++||
T Consensus 168 -------------------------~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPy 222 (637)
T COG4248 168 -------------------------ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPY 222 (637)
T ss_pred -------------------------cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCC
Confidence 1122233468999999999765 23345579999999999999976 9999
Q ss_pred CCC-------CHHHHHHHHHhc-----------CCCCCCC---CCCcHHHHHHHHHhcccC--ccccCCCh
Q 002051 872 RGK-------TRQKTFANILHK-----------DLKFPSS---TPTSLHAKQLMYRLLHRD--PKSRLGSH 919 (975)
Q Consensus 872 ~~~-------~~~~~~~~i~~~-----------~~~~p~~---~~~s~~~~~li~~~L~~d--P~~R~t~~ 919 (975)
.|. ++.+ ..|..+ ..+.|.. .-+++.+..|..+|+..- +.-|||.+
T Consensus 223 sGI~~~~~ap~p~E--~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~ 291 (637)
T COG4248 223 SGIPLISDAPNPLE--TDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAK 291 (637)
T ss_pred CcccccCCCCCcch--hhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHH
Confidence 762 1111 122221 1112211 236778899999998753 55799964
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.38 E-value=3.1e-07 Score=93.95 Aligned_cols=71 Identities=25% Similarity=0.353 Sum_probs=48.5
Q ss_pred EEEEeccC--CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHH-HHHCCCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 718 CLITDYCP--GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEY-LHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 718 ~lV~Ey~~--ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~y-LH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
+|||||++ |..+..+.... ++......++.+++..+.. +|..||+|+||.+.|||++.+ .+.++|||.+..
T Consensus 82 ~ivME~I~~~G~~~~~l~~~~----~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf~qav~ 155 (188)
T PF01163_consen 82 VIVMEYIGEDGVPLPRLKDVD----LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDFGQAVD 155 (188)
T ss_dssp EEEEE--EETTEEGGCHHHCG----GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--GTTEEE
T ss_pred EEEEEecCCCccchhhHHhcc----ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEecCccee
Confidence 69999997 54554433321 2234566778888885555 579999999999999999977 899999998744
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >COG5002 VicK Signal transduction histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.38 E-value=2.2e-06 Score=91.56 Aligned_cols=150 Identities=15% Similarity=0.206 Sum_probs=110.7
Q ss_pred CCCchhhHHHHHHHhhc--CcHHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHH
Q 002051 455 RPDSVDDKVRQKEMRKG--IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPAT 532 (975)
Q Consensus 455 ~~d~~er~~~~~~l~~~--~~l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~ 532 (975)
+.|.+++.+.-++..++ .+|..++..+.|||+.+|..|+ |+.+|..+.+++|.+.++++|++...+..-++.-.+
T Consensus 92 fn~Lt~~~~~aq~n~e~Er~kL~SvlayMtDGViATdRrG~---iI~iN~~A~k~L~~~~E~~~~~~i~elL~i~d~y~~ 168 (459)
T COG5002 92 FNDLTKRVQEAQANTEQERRKLDSVLAYMTDGVIATDRRGK---IILINKPALKMLGVSKEDALGRSILELLKIEDTYTF 168 (459)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHcCceEeecCCCc---EEEeccHHHHHhCcCHHHHhcccHHHHhCCccceeH
Confidence 45666665543333222 4589999999999999999888 999999999999999999999997776655544433
Q ss_pred HHHHHHHHHcCCcEEEEEEEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccccccCCCcchhhHHHHHHHHHH
Q 002051 533 VRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQT 612 (975)
Q Consensus 533 ~~~~~~~l~~g~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~e~~~~~~~~~~e~~~~v~~~ 612 (975)
...+........+. +.+|+.+-.+++.+.++-+.|-+.|++++..|+||+.+ ..+|....+.+.
T Consensus 169 ----~dL~e~~~s~lld~---~~~~E~~~lrv~Fs~i~rEsGfisGlIaVlhDvTEqek---------~e~ErRefvanv 232 (459)
T COG5002 169 ----EDLVEKNDSLLLDS---SDEEEGYVLRVNFSVIQRESGFISGLIAVLHDVTEQEK---------VERERREFVANV 232 (459)
T ss_pred ----HHHHhcCCcEEEee---cCCCccEEEEEEEEEEeecccccceeEEEEecccHHHH---------HHHHHHHHHHhc
Confidence 33333333333333 22777888889999999999999999999999999965 334555667777
Q ss_pred hhhhhhhhhcC
Q 002051 613 AENVNEAVKEL 623 (975)
Q Consensus 613 ~~~i~~~v~~l 623 (975)
.|+++.++..+
T Consensus 233 SHElRTPltsm 243 (459)
T COG5002 233 SHELRTPLTSM 243 (459)
T ss_pred chhhcCchHHH
Confidence 77777666553
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 975 | ||||
| 2v1a_A | 144 | N- And C-Terminal Helices Of Oat Lov2 (404-546) Are | 2e-67 | ||
| 2v0u_A | 146 | N- And C-terminal Helices Of Oat Lov2 (404-546) Are | 2e-67 | ||
| 2wkp_A | 332 | Structure Of A Photoactivatable Rac1 Containing Lov | 5e-67 | ||
| 2wkq_A | 332 | Structure Of A Photoactivatable Rac1 Containing The | 7e-66 | ||
| 2wkr_A | 332 | Structure Of A Photoactivatable Rac1 Containing The | 1e-65 | ||
| 2z6c_A | 129 | Crystal Structure Of Lov1 Domain Of Phototropin1 Fr | 2e-63 | ||
| 2z6c_A | 129 | Crystal Structure Of Lov1 Domain Of Phototropin1 Fr | 4e-25 | ||
| 2z6d_A | 130 | Crystal Structure Of Lov1 Domain Of Phototropin2 Fr | 7e-55 | ||
| 2z6d_A | 130 | Crystal Structure Of Lov1 Domain Of Phototropin2 Fr | 4e-26 | ||
| 4eep_A | 115 | Crystal Structure Of Lov2 Domain Of Arabidopsis Tha | 1e-54 | ||
| 4eer_A | 115 | Crystal Structure Of Lov2 Domain Of Arabidopsis Tha | 8e-54 | ||
| 4ees_A | 115 | Crystal Structure Of Ilov Length = 115 | 5e-52 | ||
| 4eeu_A | 118 | Crystal Structure Of Philov2.1 Length = 118 | 8e-48 | ||
| 3a60_A | 327 | Crystal Structure Of Unphosphorylated P70s6k1 (Form | 2e-46 | ||
| 3a62_A | 327 | Crystal Structure Of Phosphorylated P70s6k1 Length | 3e-46 | ||
| 3o96_A | 446 | Crystal Structure Of Human Akt1 With An Allosteric | 1e-45 | ||
| 4ejn_A | 446 | Crystal Structure Of Autoinhibited Form Of Akt1 In | 1e-45 | ||
| 4gv1_A | 340 | Pkb Alpha In Complex With Azd5363 Length = 340 | 1e-45 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 1e-45 | ||
| 3ocb_A | 341 | Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor | 5e-45 | ||
| 3cqu_A | 342 | Crystal Structure Of Akt-1 Complexed With Substrate | 5e-45 | ||
| 1vzo_A | 355 | The Structure Of The N-Terminal Kinase Domain Of Ms | 2e-44 | ||
| 1mrv_A | 339 | Crystal Structure Of An Inactive Akt2 Kinase Domain | 2e-44 | ||
| 1gzn_A | 335 | Structure Of Pkb Kinase Domain Length = 335 | 2e-44 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 3e-44 | ||
| 1gzk_A | 315 | Molecular Mechanism For The Regulation Of Protein K | 3e-44 | ||
| 2jdo_A | 342 | Structure Of Pkb-Beta (Akt2) Complexed With Isoquin | 3e-44 | ||
| 1o6l_A | 337 | Crystal Structure Of An Activated Akt/protein Kinas | 4e-44 | ||
| 1o6k_A | 336 | Structure Of Activated Form Of Pkb Kinase Domain S4 | 4e-44 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 5e-44 | ||
| 3e87_A | 335 | Crystal Structures Of The Kinase Domain Of Akt2 In | 6e-44 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 1e-43 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 1e-43 | ||
| 1g28_A | 104 | Structure Of A Flavin-Binding Domain, Lov2, From Th | 2e-40 | ||
| 4dc2_A | 396 | Structure Of Pkc In Complex With A Substrate Peptid | 5e-40 | ||
| 1cdk_A | 350 | Camp-Dependent Protein Kinase Catalytic Subunit (E. | 5e-40 | ||
| 1cmk_E | 350 | Crystal Structures Of The Myristylated Catalytic Su | 6e-40 | ||
| 3zh8_A | 349 | A Novel Small Molecule Apkc Inhibitor Length = 349 | 7e-40 | ||
| 2r5t_A | 373 | Crystal Structure Of Inactive Serum And Glucocortic | 9e-40 | ||
| 2uzt_A | 336 | Pka Structures Of Akt, Indazole-Pyridine Inhibitors | 9e-40 | ||
| 2f7e_E | 351 | Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu | 9e-40 | ||
| 1ctp_E | 350 | Structure Of The Mammalian Catalytic Subunit Of Cam | 9e-40 | ||
| 3dnd_A | 350 | Camp-Dependent Protein Kinase Pka Catalytic Subunit | 9e-40 | ||
| 1xh9_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 1e-39 | ||
| 1smh_A | 350 | Protein Kinase A Variant Complex With Completely Or | 1e-39 | ||
| 3a8w_A | 345 | Crystal Structure Of Pkciota Kinase Domain Length = | 1e-39 | ||
| 2c1a_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 1e-39 | ||
| 1svh_A | 350 | Crystal Structure Of Protein Kinase A In Complex Wi | 1e-39 | ||
| 2jds_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 2e-39 | ||
| 1xh7_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 2e-39 | ||
| 1stc_E | 350 | Camp-Dependent Protein Kinase, Alpha-Catalytic Subu | 2e-39 | ||
| 1q8w_A | 350 | The Catalytic Subunit Of Camp-Dependent Protein Kin | 2e-39 | ||
| 2jdt_A | 351 | Structure Of Pka-Pkb Chimera Complexed With Isoquin | 2e-39 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 2e-39 | ||
| 1q24_A | 350 | Pka Double Mutant Model Of Pkb In Complex With Mgat | 2e-39 | ||
| 1q61_A | 350 | Pka Triple Mutant Model Of Pkb Length = 350 | 2e-39 | ||
| 2vo0_A | 351 | Structure Of Pka-Pkb Chimera Complexed With C-(4-(4 | 2e-39 | ||
| 2uvy_A | 351 | Structure Of Pka-pkb Chimera Complexed With Methyl- | 2e-39 | ||
| 1szm_A | 350 | Dual Binding Mode Of Bisindolylmaleimide 2 To Prote | 2e-39 | ||
| 3agl_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 3e-39 | ||
| 3agm_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 3e-39 | ||
| 1zrz_A | 364 | Crystal Structure Of The Catalytic Domain Of Atypic | 3e-39 | ||
| 4ae9_A | 343 | Structure And Function Of The Human Sperm-specific | 3e-39 | ||
| 4ae6_A | 343 | Structure And Function Of The Human Sperm-specific | 3e-39 | ||
| 3mvj_A | 371 | Human Cyclic Amp-Dependent Protein Kinase Pka Inhib | 3e-39 | ||
| 4dfy_A | 371 | Crystal Structure Of R194a Mutant Of Camp-Dependent | 4e-39 | ||
| 3l9m_A | 351 | Crystal Structure Of Pkab3 (Pka Triple Mutant V123a | 4e-39 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 4e-39 | ||
| 1ydt_E | 350 | Structure Of Camp-Dependent Protein Kinase, Alpha-C | 7e-39 | ||
| 2gnj_A | 350 | Pka Three Fold Mutant Model Of Rho-Kinase With Y-27 | 9e-39 | ||
| 3fhi_A | 350 | Crystal Structure Of A Complex Between The Catalyti | 1e-38 | ||
| 3nx8_A | 351 | Human Camp Dependent Protein Kinase In Complex With | 1e-38 | ||
| 1fmo_E | 350 | Crystal Structure Of A Polyhistidine-Tagged Recombi | 1e-38 | ||
| 1j3h_A | 350 | Crystal Structure Of Apoenzyme Camp-Dependent Prote | 1e-38 | ||
| 3pvb_A | 345 | Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca | 1e-38 | ||
| 1bkx_A | 350 | A Binary Complex Of The Catalytic Subunit Of Camp-D | 1e-38 | ||
| 2qcs_A | 350 | A Complex Structure Between The Catalytic And Regul | 1e-38 | ||
| 1l3r_E | 350 | Crystal Structure Of A Transition State Mimic Of Th | 2e-38 | ||
| 1apm_E | 350 | 2.0 Angstrom Refined Crystal Structure Of The Catal | 2e-38 | ||
| 1jbp_E | 350 | Crystal Structure Of The Catalytic Subunit Of Camp- | 2e-38 | ||
| 2erz_E | 351 | Crystal Structure Of C-amp Dependent Kinase (pka) B | 2e-38 | ||
| 2qur_A | 350 | Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe | 2e-38 | ||
| 3ama_A | 351 | Protein Kinase A Sixfold Mutant Model Of Aurora B W | 2e-38 | ||
| 4dfx_E | 350 | Crystal Structure Of Myristoylated K7c Catalytic Su | 2e-38 | ||
| 4dg3_E | 371 | Crystal Structure Of R336a Mutant Of Camp-dependent | 2e-38 | ||
| 3o7l_B | 350 | Crystal Structure Of Phospholamban (1-19):pka C-Sub | 2e-38 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 2e-38 | ||
| 2gu8_A | 337 | Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel | 2e-38 | ||
| 2gnf_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 3e-38 | ||
| 1syk_A | 350 | Crystal Structure Of E230q Mutant Of Camp-Dependent | 3e-38 | ||
| 2gng_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 4e-38 | ||
| 3qam_E | 350 | Crystal Structure Of Glu208ala Mutant Of Catalytic | 6e-38 | ||
| 3qal_E | 350 | Crystal Structure Of Arg280ala Mutant Of Catalytic | 9e-38 | ||
| 3qfv_A | 415 | Mrck Beta In Complex With Tpca-1 Length = 415 | 9e-38 | ||
| 3tku_A | 433 | Mrck Beta In Complex With Fasudil Length = 433 | 1e-37 | ||
| 1rdq_E | 350 | Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of | 2e-37 | ||
| 4aw2_A | 437 | Crystal Structure Of Cdc42 Binding Protein Kinase A | 2e-37 | ||
| 3pfq_A | 674 | Crystal Structure And Allosteric Activation Of Prot | 3e-36 | ||
| 2i0e_A | 353 | Structure Of Catalytic Domain Of Human Protein Kina | 7e-36 | ||
| 3iw4_A | 360 | Crystal Structure Of Pkc Alpha In Complex With Nvp- | 9e-36 | ||
| 1n9l_A | 109 | Crystal Structure Of The Phot-lov1 Domain From Chla | 2e-35 | ||
| 1n9l_A | 109 | Crystal Structure Of The Phot-lov1 Domain From Chla | 2e-24 | ||
| 2f2u_A | 402 | Crystal Structure Of The Rho-Kinase Kinase Domain L | 3e-34 | ||
| 3v8s_A | 410 | Human Rho-Associated Protein Kinase 1 (Rock 1) In C | 1e-33 | ||
| 2esm_A | 415 | Crystal Structure Of Rock 1 Bound To Fasudil Length | 2e-33 | ||
| 2v55_A | 406 | Mechanism Of Multi-site Phosphorylation From A Rock | 2e-33 | ||
| 3ulf_A | 170 | The Light State Structure Of The Blue-light Photore | 1e-32 | ||
| 3ue6_A | 166 | The Dark Structure Of The Blue-light Photoreceptor | 2e-32 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 2e-32 | ||
| 2vd5_A | 412 | Structure Of Human Myotonic Dystrophy Protein Kinas | 3e-32 | ||
| 1omw_A | 689 | Crystal Structure Of The Complex Between G Protein- | 4e-32 | ||
| 3psc_A | 695 | Bovine Grk2 In Complex With Gbetagamma Subunits Len | 4e-32 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 5e-32 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 8e-32 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 1e-31 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 1e-31 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 1e-31 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 1e-31 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 2e-31 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 2e-31 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 3e-31 | ||
| 3cik_A | 689 | Human Grk2 In Complex With Gbetagamma Subunits Leng | 3e-31 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 3e-31 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 3e-31 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 3e-31 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 3e-31 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 4e-31 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 4e-31 | ||
| 3krw_A | 688 | Human Grk2 In Complex With Gbetgamma Subunits And B | 4e-31 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 4e-31 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 6e-31 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 6e-31 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 7e-31 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 1e-30 | ||
| 4fr4_A | 384 | Crystal Structure Of Human SerineTHREONINE-Protein | 2e-30 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 7e-30 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 9e-30 | ||
| 3t50_A | 128 | X-Ray Structure Of The Lov Domain From The Lov-Hk S | 4e-29 | ||
| 2pr5_A | 132 | Structural Basis For Light-dependent Signaling In T | 1e-26 | ||
| 3t8o_A | 543 | Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu | 7e-24 | ||
| 3c4x_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 7e-24 | ||
| 3c4w_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 7e-24 | ||
| 3qc9_A | 543 | Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4 | 9e-24 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 4e-23 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 5e-23 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 7e-23 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 1e-22 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 1e-22 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 2e-22 | ||
| 2jam_A | 304 | Crystal Structure Of Human Calmodulin-Dependent Pro | 2e-22 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 2e-22 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 3e-22 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 4e-22 | ||
| 3p7n_A | 258 | Crystal Structure Of Light Activated Transcription | 5e-22 | ||
| 3p7n_A | 258 | Crystal Structure Of Light Activated Transcription | 6e-20 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 5e-22 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 5e-22 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 6e-22 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 6e-22 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 8e-22 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 8e-22 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 1e-21 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 1e-21 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 1e-21 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 1e-21 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 1e-21 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 1e-21 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 1e-21 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 1e-21 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 2e-21 | ||
| 4af3_A | 292 | Human Aurora B Kinase In Complex With Incenp And Vx | 2e-21 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 2e-21 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 2e-21 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 2e-21 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 2e-21 | ||
| 3cok_A | 278 | Crystal Structure Of Plk4 Kinase Length = 278 | 3e-21 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 3e-21 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 3e-21 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 4e-21 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 8e-21 | ||
| 3rh8_B | 148 | Crystal Structure Of The Light-State Dimer Of Funga | 2e-20 | ||
| 3hjk_A | 154 | 2.0 Angstrom Structure Of The Ile74val Variant Of V | 2e-20 | ||
| 1a06_A | 332 | Calmodulin-Dependent Protein Kinase From Rat Length | 2e-20 | ||
| 3hji_A | 154 | 1.8 Angstrom Crystal Structure Of The I74v:i85v Var | 3e-20 | ||
| 3is2_B | 154 | 2.3 Angstrom Crystal Structure Of A Cys71 Sulfenic | 3e-20 | ||
| 3is2_A | 154 | 2.3 Angstrom Crystal Structure Of A Cys71 Sulfenic | 3e-20 | ||
| 2pd8_A | 149 | 1.8 Angstrom Crystal Structure Of The Cys71ser Muta | 3e-20 | ||
| 2pd7_A | 149 | 2.0 Angstrom Crystal Structure Of The Fungal Blue-L | 3e-20 | ||
| 3d72_A | 149 | 1.65 Angstrom Crystal Structure Of The Cys71val Var | 4e-20 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 4e-20 | ||
| 4fg8_A | 315 | Crystal Structure Of Human Calcium/calmodulin-depen | 4e-20 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 4e-20 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 5e-20 | ||
| 2jc6_A | 334 | Crystal Structure Of Human Calmodulin-Dependent Pro | 1e-19 | ||
| 3ujg_A | 361 | Crystal Structure Of Snrk2.6 In Complex With Hab1 L | 2e-19 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 2e-19 | ||
| 3bhy_A | 283 | Crystal Structure Of Human Death Associated Protein | 2e-19 | ||
| 3zut_A | 362 | The Structure Of Ost1 (D160a) Kinase Length = 362 | 3e-19 | ||
| 2j90_A | 304 | Crystal Structure Of Human Zip Kinase In Complex Wi | 3e-19 | ||
| 1yrp_A | 278 | Catalytic Domain Of Human Zip Kinase Phosphorylated | 3e-19 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 4e-19 | ||
| 3uc4_A | 362 | The Crystal Structure Of Snf1-Related Kinase 2.6 Le | 5e-19 | ||
| 2zv2_A | 298 | Crystal Structure Of Human CalciumCALMODULIN-Depend | 5e-19 | ||
| 2bfy_A | 284 | Complex Of Aurora-B With Incenp And Hesperidin. Len | 7e-19 | ||
| 3zuu_A | 362 | The Structure Of Ost1 (D160a, S175d) Kinase In Comp | 8e-19 | ||
| 2w4o_A | 349 | Crystal Structure Of Human Camk4 In Complex With 4- | 8e-19 | ||
| 3udb_A | 317 | Crystal Structure Of Snrk2.6 Length = 317 | 1e-18 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 2e-18 | ||
| 2ya9_A | 361 | Crystal Structure Of The Autoinhibited Form Of Mous | 2e-18 | ||
| 3rny_A | 346 | Crystal Structure Of Human Rsk1 C-Terminal Kinase D | 3e-18 | ||
| 2wnt_A | 330 | Crystal Structure Of The Human Ribosomal Protein S6 | 3e-18 | ||
| 2x0g_A | 334 | X-ray Structure Of A Dap-kinase Calmodulin Complex | 3e-18 | ||
| 2vrx_A | 285 | Structure Of Aurora B Kinase In Complex With Zm4474 | 3e-18 | ||
| 2bfx_B | 284 | Mechanism Of Aurora-B Activation By Incenp And Inhi | 3e-18 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 3e-18 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 3e-18 | ||
| 2y0a_A | 326 | Structure Of Dapk1 Construct Residues 1-304 Length | 3e-18 | ||
| 2xzs_A | 312 | Death Associated Protein Kinase 1 Residues 1-312 Le | 4e-18 | ||
| 2w4k_A | 302 | X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | 4e-18 | ||
| 1zws_A | 288 | Crystal Structure Of The Catalytic Domain Of Human | 4e-18 | ||
| 2a27_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 4e-18 | ||
| 2c30_A | 321 | Crystal Structure Of The Human P21-Activated Kinase | 5e-18 | ||
| 2yak_A | 285 | Structure Of Death-Associated Protein Kinase 1 (Dap | 5e-18 | ||
| 1z9x_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 5e-18 | ||
| 1wmk_A | 321 | Human Death-Associated Kinase Drp-1, Mutant S308d D | 5e-18 | ||
| 1p4f_A | 293 | Death Associated Protein Kinase Catalytic Domain Wi | 5e-18 | ||
| 1ig1_A | 294 | 1.8a X-Ray Structure Of Ternary Complex Of A Cataly | 5e-18 | ||
| 3f5u_A | 295 | Crystal Structure Of The Death Associated Protein K | 5e-18 | ||
| 3dfc_B | 295 | Crystal Structure Of A Glycine-Rich Loop Mutant Of | 5e-18 | ||
| 3gu4_A | 295 | Crystal Structure Of Dapkq23v-Amppnp Length = 295 | 6e-18 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 6e-18 | ||
| 3gu8_A | 295 | Crystal Structure Of Dapkl93g With N6-Cyclopentylad | 6e-18 | ||
| 2a2a_A | 321 | High-resolution Crystallographic Analysis Of The Au | 6e-18 | ||
| 1wvw_A | 278 | Crystal Structures Of Kinase Domain Of Dap Kinase I | 6e-18 | ||
| 2w4j_A | 277 | X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | 7e-18 | ||
| 1kob_A | 387 | Twitchin Kinase Fragment (Aplysia), Autoregulated P | 7e-18 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 7e-18 | ||
| 3uc3_A | 361 | The Crystal Structure Of Snf1-Related Kinase 2.3 Le | 1e-17 | ||
| 2xuu_A | 334 | Crystal Structure Of A Dap-Kinase 1 Mutant Length = | 1e-17 | ||
| 2qr8_A | 342 | 2.0a X-ray Structure Of C-terminal Kinase Domain Of | 2e-17 | ||
| 2ycr_A | 323 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 2e-17 | ||
| 3sw1_A | 162 | Structure Of A Full-Length Bacterial Lov Protein Le | 2e-17 | ||
| 3sw1_A | 162 | Structure Of A Full-Length Bacterial Lov Protein Le | 2e-13 | ||
| 2ycf_A | 322 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 2e-17 | ||
| 2w0j_A | 323 | Crystal Structure Of Chk2 In Complex With Nsc 10955 | 2e-17 | ||
| 2xk9_A | 322 | Structural Analysis Of Checkpoint Kinase 2 (Chk2) I | 3e-17 | ||
| 2cn5_A | 329 | Crystal Structure Of Human Chk2 In Complex With Adp | 3e-17 | ||
| 3lm0_A | 327 | Crystal Structure Of Human SerineTHREONINE KINASE 1 | 5e-17 | ||
| 3rzf_A | 677 | Crystal Structure Of Inhibitor Of Kappab Kinase Bet | 6e-17 | ||
| 3i6u_A | 419 | Structure And Activation Mechanism Of The Chk2 Dna- | 6e-17 | ||
| 3i6w_A | 443 | Structure And Activation Mechanism Of The Chk2 Dna- | 6e-17 | ||
| 3qa8_A | 676 | Crystal Structure Of Inhibitor Of Kappa B Kinase Be | 7e-17 | ||
| 4apc_A | 350 | Crystal Structure Of Human Nima-Related Kinase 1 (N | 1e-16 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 1e-16 | ||
| 2hw6_A | 307 | Crystal Structure Of Mnk1 Catalytic Domain Length = | 2e-16 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 2e-16 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 2e-16 | ||
| 1ql6_A | 298 | The Catalytic Mechanism Of Phosphorylase Kinase Pro | 2e-16 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 3e-16 | ||
| 2qr7_A | 342 | 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of | 3e-16 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 3e-16 | ||
| 3thb_A | 333 | Structure Of Plk1 Kinase Domain In Complex With A B | 4e-16 | ||
| 2ou7_A | 335 | Structure Of The Catalytic Domain Of Human Polo-Lik | 4e-16 | ||
| 2v5q_A | 315 | Crystal Structure Of Wild-type Plk-1 Kinase Domain | 5e-16 | ||
| 2ac3_A | 316 | Structure Of Human Mnk2 Kinase Domain Length = 316 | 5e-16 | ||
| 2phk_A | 277 | The Crystal Structure Of A Phosphorylase Kinase Pep | 6e-16 | ||
| 3bhh_A | 295 | Crystal Structure Of Human Calcium/calmodulin-depen | 6e-16 | ||
| 1phk_A | 298 | Two Structures Of The Catalytic Domain Of Phosphory | 6e-16 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 6e-16 | ||
| 2yac_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 7e-16 | ||
| 3kb7_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 7e-16 | ||
| 3hzt_A | 467 | Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4 | 8e-16 | ||
| 1koa_A | 491 | Twitchin Kinase Fragment (C.Elegans), Autoregulated | 9e-16 | ||
| 3uto_A | 573 | Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin- | 1e-15 | ||
| 2rku_A | 294 | Structure Of Plk1 In Complex With Bi2536 Length = 2 | 1e-15 | ||
| 3h4j_B | 336 | Crystal Structure Of Pombe Ampk Kdaid Fragment Leng | 1e-15 | ||
| 1y8g_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 1e-15 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 1e-15 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 2e-15 | ||
| 2wel_A | 327 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 2e-15 | ||
| 3dxn_A | 287 | Crystal Structure Of The Calcium-dependent Kinase F | 2e-15 | ||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 2e-15 | ||
| 3d5u_A | 317 | Crystal Structure Of A Wildtype Polo-Like Kinase 1 | 2e-15 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 2e-15 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 3e-15 | ||
| 2bdw_A | 362 | Crystal Structure Of The Auto-Inhibited Kinase Doma | 3e-15 | ||
| 2vn9_A | 301 | Crystal Structure Of Human Calcium Calmodulin Depen | 3e-15 | ||
| 3d5v_A | 317 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 3e-15 | ||
| 3d5w_A | 317 | Crystal Structure Of A Phosphorylated Polo-Like Kin | 3e-15 | ||
| 2vz6_A | 313 | Structure Of Human Calcium Calmodulin Dependent Pro | 3e-15 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 4e-15 | ||
| 2ac5_A | 316 | Structure Of Human Mnk2 Kinase Domain Mutant D228g | 4e-15 | ||
| 3db6_A | 301 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 5e-15 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 5e-15 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 7e-15 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 7e-15 | ||
| 3kl8_A | 269 | Camkiintide Inhibitor Complex Length = 269 | 7e-15 | ||
| 3kk9_A | 282 | Camkii Substrate Complex B Length = 282 | 8e-15 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 9e-15 | ||
| 3kk8_A | 284 | Camkii Substrate Complex A Length = 284 | 9e-15 | ||
| 2x4f_A | 373 | The Crystal Structure Of The Human Myosin Light Cha | 1e-14 | ||
| 3soa_A | 444 | Full-Length Human Camkii Length = 444 | 1e-14 | ||
| 3iec_A | 319 | Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K | 1e-14 | ||
| 3kn5_A | 325 | Crystal Structure Of The C-Terminal Kinase Domain O | 2e-14 | ||
| 3mfr_A | 351 | Cask-4m Cam Kinase Domain, Native Length = 351 | 2e-14 | ||
| 3lij_A | 494 | Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) | 2e-14 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 2e-14 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 2e-14 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 2e-14 | ||
| 3f3z_A | 277 | Crystal Structure Of Cryptosporidium Parvum Calcium | 3e-14 | ||
| 2qg5_A | 294 | Cryptosporidium Parvum Calcium Dependent Protein Ki | 3e-14 | ||
| 2v7o_A | 336 | Crystal Structure Of Human Calcium-Calmodulin-Depen | 3e-14 | ||
| 1tki_A | 321 | Autoinhibited Serine Kinase Domain Of The Giant Mus | 4e-14 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 8e-14 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 1e-13 | ||
| 3com_A | 314 | Crystal Structure Of Mst1 Kinase Length = 314 | 1e-13 | ||
| 3q5i_A | 504 | Crystal Structure Of Pbanka_031420 Length = 504 | 1e-13 | ||
| 3is5_A | 285 | Crystal Structure Of Cdpk Kinase Domain From Toxopl | 2e-13 | ||
| 1zyc_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 2e-13 | ||
| 3fhr_A | 336 | High Resolution Crystal Structure Of Mitogen-Activa | 3e-13 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 3e-13 | ||
| 2x7f_A | 326 | Crystal Structure Of The Kinase Domain Of Human Tra | 3e-13 | ||
| 3r1n_A | 317 | Mk3 Kinase Bound To Compound 5b Length = 317 | 3e-13 | ||
| 3igo_A | 486 | Crystal Structure Of Cryptosporidium Parvum Cdpk1, | 8e-13 | ||
| 2hog_A | 322 | Crystal Structure Of Chek1 In Complex With Inhibito | 9e-13 | ||
| 2r0u_A | 323 | Crystal Structure Of Chek1 In Complex With Inhibito | 9e-13 | ||
| 2wtk_C | 305 | Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2 | 1e-12 | ||
| 4fsu_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-12 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 1e-12 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 1e-12 | ||
| 3i79_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 1e-12 | ||
| 2br1_A | 297 | Structure-Based Design Of Novel Chk1 Inhibitors: In | 1e-12 | ||
| 1ia8_A | 289 | The 1.7 A Crystal Structure Of Human Cell Cycle Che | 1e-12 | ||
| 1zlt_A | 295 | Crystal Structure Of Chk1 Complexed With A Hymenald | 1e-12 | ||
| 3hx4_A | 508 | Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg | 1e-12 | ||
| 3ku2_A | 507 | Crystal Structure Of Inactivated Form Of Cdpk1 From | 1e-12 | ||
| 2x8e_A | 276 | Discovery Of A Novel Class Of Triazolones As Checkp | 1e-12 | ||
| 3vul_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 1e-12 | ||
| 4fsy_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-12 | ||
| 1zxe_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 1e-12 | ||
| 4fsn_A | 278 | Crystal Structure Of The Chk1 Length = 278 | 1e-12 | ||
| 2ydj_A | 276 | Discovery Of Checkpoint Kinase Inhibitor Azd7762 By | 1e-12 | ||
| 3ot3_A | 273 | X-Ray Crystal Structure Of Compound 22k Bound To Hu | 1e-12 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 1e-12 | ||
| 4fsm_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-12 | ||
| 4ft3_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-12 | ||
| 4fsz_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-12 | ||
| 4fsw_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-12 | ||
| 2e9v_A | 268 | Structure Of H-Chk1 Complexed With A859017 Length = | 2e-12 | ||
| 1zys_A | 273 | Co-Crystal Structure Of Checkpoint Kinase Chk1 With | 2e-12 | ||
| 3vum_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M7 | 2e-12 | ||
| 3jvr_A | 271 | Characterization Of The Chk1 Allosteric Inhibitor B | 2e-12 | ||
| 2ghg_A | 269 | H-Chk1 Complexed With A431994 Length = 269 | 2e-12 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 2e-12 | ||
| 2ayp_A | 269 | Crystal Structure Of Chk1 With An Indol Inhibitor L | 2e-12 | ||
| 2wei_A | 287 | Crystal Structure Of The Kinase Domain Of Cryptospo | 2e-12 | ||
| 3dfa_A | 286 | Crystal Structure Of Kinase Domain Of Calcium-depen | 2e-12 | ||
| 4fst_A | 269 | Crystal Structure Of The Chk1 Length = 269 | 2e-12 | ||
| 3tac_A | 361 | Crystal Structure Of The Liprin-AlphaCASK COMPLEX L | 3e-12 | ||
| 3hko_A | 345 | Crystal Structure Of A Cdpk Kinase Domain From Cryp | 3e-12 | ||
| 3ma6_A | 298 | Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr | 3e-12 | ||
| 3c0g_A | 351 | Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len | 3e-12 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 3e-12 | ||
| 3npc_A | 364 | Crystal Structure Of Jnk2 Complexed With Birb796 Le | 3e-12 | ||
| 1uv5_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With 6-Br | 4e-12 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 5e-12 | ||
| 3vuk_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M5 | 5e-12 | ||
| 1i09_A | 420 | Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len | 6e-12 | ||
| 1pyx_A | 422 | Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | 6e-12 | ||
| 1q3d_A | 424 | Gsk-3 Beta Complexed With Staurosporine Length = 42 | 7e-12 | ||
| 4acc_A | 465 | Gsk3b In Complex With Inhibitor Length = 465 | 7e-12 | ||
| 1q5k_A | 414 | Crystal Structure Of Glycogen Synthase Kinase 3 In | 8e-12 | ||
| 4g31_A | 299 | Crystal Structure Of Gsk6414 Bound To Perk (R587-R1 | 8e-12 | ||
| 3i7c_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 8e-12 | ||
| 3oz6_A | 388 | Crystal Structure Of Mapk From Cryptosporidium Parv | 9e-12 | ||
| 1r0e_A | 391 | Glycogen Synthase Kinase-3 Beta In Complex With 3-I | 1e-11 | ||
| 2o5k_A | 372 | Crystal Structure Of Gsk3beta In Complex With A Ben | 1e-11 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 1e-11 | ||
| 1h8f_A | 352 | Glycogen Synthase Kinase 3 Beta. Length = 352 | 1e-11 | ||
| 1kwp_A | 400 | Crystal Structure Of Mapkap2 Length = 400 | 1e-11 | ||
| 3sd0_A | 350 | Identification Of A Glycogen Synthase Kinase-3b Inh | 2e-11 | ||
| 2onl_C | 406 | Crystal Structure Of The P38a-Mapkap Kinase 2 Heter | 2e-11 | ||
| 2wqm_A | 310 | Structure Of Apo Human Nek7 Length = 310 | 2e-11 | ||
| 2pml_X | 348 | Crystal Structure Of Pfpk7 In Complex With An Atp A | 2e-11 | ||
| 2oza_A | 356 | Structure Of P38alpha Complex Length = 356 | 2e-11 | ||
| 4hia_A | 176 | Crystal Structure Of Rhodobacter Sphaeroides Lov Pr | 2e-11 | ||
| 4hia_A | 176 | Crystal Structure Of Rhodobacter Sphaeroides Lov Pr | 1e-10 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 2e-11 | ||
| 4hj3_A | 176 | Crystal Structure Of Rhodobacter Sphaeroides Lov Pr | 2e-11 | ||
| 4hj3_A | 176 | Crystal Structure Of Rhodobacter Sphaeroides Lov Pr | 1e-10 | ||
| 2jbo_A | 326 | Protein Kinase Mk2 In Complex With An Inhibitor (Cr | 2e-11 | ||
| 3vui_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 2e-11 | ||
| 3fi3_A | 364 | Crystal Structure Of Jnk3 With Indazole Inhibitor, | 2e-11 | ||
| 3gok_A | 334 | Binding Site Mapping Of Protein Ligands Length = 33 | 2e-11 | ||
| 3ttj_A | 464 | Crystal Structure Of Jnk3 Complexed With Cc-359, A | 2e-11 | ||
| 3say_A | 430 | Crystal Structure Of Human Glycogen Synthase Kinase | 2e-11 | ||
| 3e7o_A | 360 | Crystal Structure Of Jnk2 Length = 360 | 2e-11 | ||
| 3vuh_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M3 | 3e-11 | ||
| 4hj6_A | 178 | Crystal Structure Of Rhodobacter Sphaeroides Lov Pr | 3e-11 | ||
| 4hj6_A | 178 | Crystal Structure Of Rhodobacter Sphaeroides Lov Pr | 2e-10 | ||
| 3r2b_A | 318 | Mk2 Kinase Bound To Compound 5b Length = 318 | 3e-11 | ||
| 3fpm_A | 325 | Crystal Structure Of A Squarate Inhibitor Bound To | 3e-11 | ||
| 2pzy_A | 324 | Structure Of Mk2 Complexed With Compound 76 Length | 3e-11 | ||
| 2p3g_X | 327 | Crystal Structure Of A Pyrrolopyridine Inhibitor Bo | 3e-11 | ||
| 4hj4_A | 177 | Crystal Structure Of Rhodobacter Sphaeroides Lov Pr | 3e-11 | ||
| 4hj4_A | 177 | Crystal Structure Of Rhodobacter Sphaeroides Lov Pr | 2e-10 | ||
| 3ka0_A | 320 | Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4 | 3e-11 | ||
| 1pme_A | 380 | Structure Of Penta Mutant Human Erk2 Map Kinase Com | 3e-11 | ||
| 3r2y_A | 319 | Mk2 Kinase Bound To Compound 1 Length = 319 | 3e-11 | ||
| 2xs0_A | 386 | Linear Binding Motifs For Jnk And For Calcineurin A | 3e-11 | ||
| 4afj_A | 367 | 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec | 4e-11 | ||
| 2o0u_A | 364 | Crystal Structure Of Human Jnk3 Complexed With N-{3 | 4e-11 | ||
| 3ptg_A | 363 | Design And Synthesis Of A Novel, Orally Efficacious | 4e-11 | ||
| 4dit_A | 382 | Crystal Structure Of Gsk3beta In Complex With A Imi | 4e-11 | ||
| 2ok1_A | 365 | Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3 | 4e-11 | ||
| 3oxi_A | 362 | Design And Synthesis Of Disubstituted Thiophene And | 4e-11 | ||
| 1gng_A | 378 | Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With | 4e-11 | ||
| 1jnk_A | 423 | The C-Jun N-Terminal Kinase (Jnk3s) Complexed With | 4e-11 | ||
| 3zrk_A | 371 | Identification Of 2-(4-Pyridyl)thienopyridinones As | 4e-11 | ||
| 1pmn_A | 364 | Crystal Structure Of Jnk3 In Complex With An Imidaz | 4e-11 | ||
| 3vug_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 5e-11 | ||
| 3kvx_A | 364 | Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le | 5e-11 | ||
| 4h36_A | 356 | Crystal Structure Of Jnk3 In Complex With Atf2 Pept | 5e-11 | ||
| 1o9u_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 5e-11 | ||
| 2exc_X | 356 | Inhibitor Complex Of Jnk3 Length = 356 | 5e-11 | ||
| 3oht_A | 389 | Crystal Structure Of Salmo Salar P38alpha Length = | 6e-11 | ||
| 2b1p_A | 355 | Inhibitor Complex Of Jnk3 Length = 355 | 6e-11 | ||
| 3zdi_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 6e-11 | ||
| 3qd2_B | 332 | Crsytal Structure Of Mouse Perk Kinase Domain Lengt | 6e-11 | ||
| 2r9s_A | 356 | C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu | 6e-11 | ||
| 2ow3_A | 352 | Glycogen Synthase Kinase-3 Beta In Complex With Bis | 6e-11 | ||
| 3gb2_A | 353 | Gsk3beta Inhibitor Complex Length = 353 | 7e-11 | ||
| 3f7z_A | 350 | X-ray Co-crystal Structure Of Glycogen Synthase Kin | 7e-11 | ||
| 1bi8_A | 326 | Mechanism Of G1 Cyclin Dependent Kinase Inhibition | 8e-11 | ||
| 3vud_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 8e-11 | ||
| 3f88_A | 349 | Glycogen Synthase Kinase 3beta Inhibitor Complex Le | 9e-11 | ||
| 2clq_A | 295 | Structure Of Mitogen-Activated Protein Kinase Kinas | 9e-11 | ||
| 1ukh_A | 369 | Structural Basis For The Selective Inhibition Of Jn | 9e-11 | ||
| 3coi_A | 353 | Crystal Structure Of P38delta Kinase Length = 353 | 9e-11 | ||
| 2xrw_A | 371 | Linear Binding Motifs For Jnk And For Calcineurin A | 9e-11 | ||
| 4h3q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 1e-10 | ||
| 1jow_B | 308 | Crystal Structure Of A Complex Of Human Cdk6 And A | 1e-10 | ||
| 3fv8_A | 355 | Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le | 1e-10 | ||
| 3fi2_A | 353 | Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib | 1e-10 | ||
| 4g3d_A | 371 | Crystal Structure Of Human Nf-kappab Inducing Kinas | 1e-10 | ||
| 3nup_A | 307 | Cdk6 (Monomeric) In Complex With Inhibitor Length = | 1e-10 | ||
| 1wzy_A | 368 | Crystal Structure Of Human Erk2 Complexed With A Py | 1e-10 | ||
| 1tvo_A | 368 | The Structure Of Erk2 In Complex With A Small Molec | 1e-10 | ||
| 4fv6_A | 360 | Crystal Structure Of The Erk2 Complexed With E57 Le | 1e-10 | ||
| 2ojg_A | 380 | Crystal Structure Of Erk2 In Complex With N,n-dimet | 1e-10 | ||
| 2y9q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 1e-10 | ||
| 2j7t_A | 302 | Crystal Structure Of Human Serine Threonine Kinase- | 1e-10 | ||
| 3o71_A | 358 | Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length | 2e-10 | ||
| 1gol_A | 364 | Coordinates Of Rat Map Kinase Erk2 With An Arginine | 2e-10 | ||
| 3zu7_A | 365 | Crystal Structure Of A Designed Selected Ankyrin Re | 2e-10 | ||
| 2z7l_A | 366 | Unphosphorylated Mitogen Activated Protein Kinase E | 2e-10 | ||
| 3c9w_A | 357 | Crystal Structure Of Erk-2 With Hypothemycin Covale | 2e-10 | ||
| 2fys_B | 364 | Crystal Structure Of Erk2 Complex With Kim Peptide | 2e-10 | ||
| 3tei_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 2e-10 | ||
| 4fux_A | 360 | Crystal Structure Of The Erk2 Complexed With E75 Le | 2e-10 | ||
| 4bc6_A | 293 | Crystal Structure Of Human Serine Threonine Kinase- | 2e-10 | ||
| 3qyw_A | 364 | Crystal Structure Of Erk2 In Complex With An Inhibi | 2e-10 | ||
| 3r63_A | 358 | Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | 2e-10 | ||
| 2w5a_A | 279 | Human Nek2 Kinase Adp-Bound Length = 279 | 2e-10 | ||
| 2jav_A | 279 | Human Kinase With Pyrrole-Indolinone Ligand Length | 2e-10 | ||
| 4fv7_A | 360 | Crystal Structure Of The Erk2 Complexed With E94 Le | 2e-10 | ||
| 4gsb_A | 364 | Monoclinic Crystal Form Of The Apo-Erk2 Length = 36 | 2e-10 | ||
| 2w96_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 2e-10 | ||
| 1nxk_A | 400 | Crystal Structure Of Staurosporine Bound To Map Kap | 2e-10 | ||
| 3sa0_A | 360 | Complex Of Erk2 With Norathyriol Length = 360 | 2e-10 | ||
| 4dn5_A | 356 | Crystal Structure Of Nf-kb-inducing Kinase (nik) Le | 2e-10 | ||
| 3vw6_A | 269 | Crystal Structure Of Human Apoptosis Signal-Regulat | 2e-10 | ||
| 3kvw_A | 429 | Crystal Structure Of Dual-Specificity Tyrosine Phos | 2e-10 | ||
| 2w9f_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 3e-10 | ||
| 4a4x_A | 279 | Nek2-Ede Bound To Cct248662 Length = 279 | 3e-10 | ||
| 4e7w_A | 394 | Structure Of Gsk3 From Ustilago Maydis Length = 394 | 3e-10 | ||
| 3k2l_A | 429 | Crystal Structure Of Dual-Specificity Tyrosine Phos | 3e-10 | ||
| 2gph_A | 364 | Docking Motif Interactions In The Map Kinase Erk2 L | 3e-10 | ||
| 3elj_A | 369 | Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine | 3e-10 | ||
| 2g01_A | 370 | Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit | 3e-10 | ||
| 2w99_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 4e-10 | ||
| 4azf_A | 417 | Human Dyrk2 In Complex With Leucettine L41 Length = | 4e-10 | ||
| 4exu_A | 371 | Mapk13, Inactive Form Length = 371 | 4e-10 | ||
| 3v3v_A | 379 | Structural And Functional Analysis Of Quercetagetin | 4e-10 | ||
| 3o17_A | 370 | Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3 | 4e-10 | ||
| 3pze_A | 358 | Jnk1 In Complex With Inhibitor Length = 358 | 4e-10 | ||
| 3zuv_A | 364 | Crystal Structure Of A Designed Selected Ankyrin Re | 6e-10 | ||
| 2erk_A | 365 | Phosphorylated Map Kinase Erk2 Length = 365 | 6e-10 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 8e-10 | ||
| 2zoq_A | 382 | Structural Dissection Of Human Mitogen-Activated Ki | 9e-10 | ||
| 2j0l_A | 276 | Crystal Structure Of A The Active Conformation Of T | 9e-10 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 9e-10 | ||
| 3pxk_A | 282 | Focal Adhesion Kinase Catalytic Domain In Complex W | 1e-09 | ||
| 2j0j_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 1e-09 | ||
| 2etm_A | 281 | Crystal Structure Of Focal Adhesion Kinase Domain C | 1e-09 | ||
| 3g33_A | 308 | Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | 1e-09 | ||
| 1mp8_A | 281 | Crystal Structure Of Focal Adhesion Kinase (Fak) Le | 1e-09 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 1e-09 | ||
| 4ebw_A | 304 | Structure Of Focal Adhesion Kinase Catalytic Domain | 1e-09 | ||
| 3bz3_A | 276 | Crystal Structure Analysis Of Focal Adhesion Kinase | 1e-09 | ||
| 2jkm_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 1e-09 | ||
| 1vyw_A | 309 | Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = | 1e-09 | ||
| 2j0m_B | 276 | Crystal Structure A Two-Chain Complex Between The F | 2e-09 | ||
| 1ua2_A | 346 | Crystal Structure Of Human Cdk7 Length = 346 | 2e-09 | ||
| 4eom_A | 301 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 2e-09 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 2e-09 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 2e-09 | ||
| 1mru_A | 311 | Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob | 2e-09 | ||
| 4eon_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 2e-09 | ||
| 4eop_A | 300 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 2e-09 | ||
| 4eoi_A | 299 | Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc | 2e-09 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 2e-09 | ||
| 4eoo_A | 299 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 2e-09 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 2e-09 | ||
| 2b9h_A | 353 | Crystal Structure Of Fus3 With A Docking Motif From | 2e-09 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 2e-09 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 3e-09 | ||
| 4e5a_X | 360 | The W197a Mutant Of P38a Map Kinase Length = 360 | 3e-09 | ||
| 1ywr_A | 360 | Crystal Structure Analysis Of Inactive P38 Kinase D | 3e-09 | ||
| 1oit_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 4e-09 | ||
| 4b99_A | 398 | Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le | 4e-09 | ||
| 3pxf_A | 306 | Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N | 4e-09 | ||
| 4ic7_A | 442 | Crystal Structure Of The Erk5 Kinase Domain In Comp | 4e-09 | ||
| 3ezr_A | 300 | Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ | 4e-09 | ||
| 1yw2_A | 360 | Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | 4e-09 | ||
| 4eoj_A | 302 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 4e-09 | ||
| 2b9f_A | 353 | Crystal Structure Of Non-Phosphorylated Fus3 Length | 4e-09 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 4e-09 | ||
| 2w17_A | 299 | Cdk2 In Complex With The Imidazole Pyrimidine Amide | 4e-09 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 4e-09 | ||
| 1fin_A | 298 | Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = | 4e-09 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 4e-09 | ||
| 1pf8_A | 298 | Crystal Structure Of Human Cyclin-dependent Kinase | 4e-09 | ||
| 3pj8_A | 299 | Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D] | 4e-09 | ||
| 2iw8_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82 | 4e-09 | ||
| 1oir_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 4e-09 | ||
| 1h01_A | 298 | Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili | 4e-09 | ||
| 1gii_A | 298 | Human Cyclin Dependent Kinase 2 Complexed With The | 5e-09 | ||
| 2j0k_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 5e-09 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 5e-09 | ||
| 4eos_A | 300 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 5e-09 | ||
| 1ogu_A | 302 | Structure Of Human Thr160-phospho Cdk2/cyclin A Com | 5e-09 | ||
| 4eok_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 5e-09 | ||
| 1e9h_A | 297 | Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex | 5e-09 | ||
| 4i3z_A | 296 | Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES | 5e-09 | ||
| 1w98_A | 298 | The Structural Basis Of Cdk2 Activation By Cyclin E | 5e-09 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 5e-09 | ||
| 1h1p_A | 303 | Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP | 5e-09 | ||
| 4erw_A | 306 | Cdk2 In Complex With Staurosporine Length = 306 | 5e-09 | ||
| 2iw6_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com | 5e-09 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 5e-09 | ||
| 2ghl_A | 348 | Mutant Mus Musculus P38 Kinase Domain In Complex Wi | 5e-09 | ||
| 4eoq_A | 301 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 6e-09 | ||
| 4bcq_A | 301 | Structure Of Cdk2 In Complex With Cyclin A And A 2- | 6e-09 | ||
| 1jst_A | 298 | Phosphorylated Cyclin-Dependent Kinase-2 Bound To C | 6e-09 | ||
| 1qmz_A | 299 | Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com | 6e-09 | ||
| 3bht_A | 300 | Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN | 6e-09 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 6e-09 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 6e-09 | ||
| 1cm8_A | 367 | Phosphorylated Map Kinase P38-Gamma Length = 367 | 6e-09 | ||
| 4g3f_A | 336 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 6e-09 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 6e-09 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 6e-09 | ||
| 1gz8_A | 299 | Human Cyclin Dependent Kinase 2 Complexed With The | 6e-09 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 6e-09 | ||
| 3qhr_A | 298 | Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic | 6e-09 | ||
| 2jkk_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 7e-09 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 7e-09 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 7e-09 | ||
| 2buj_A | 317 | Crystal Structure Of The Human Serine-Threonine Kin | 7e-09 | ||
| 4g3c_A | 352 | Crystal Structure Of Apo Murine Nf-kappab Inducing | 7e-09 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 7e-09 | ||
| 2jfm_A | 325 | Crystal Structure Of Human Ste20-Like Kinase (Unlig | 8e-09 | ||
| 4g3g_A | 350 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 8e-09 | ||
| 2j51_A | 325 | Crystal Structure Of Human Ste20-Like Kinase Bound | 9e-09 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 9e-09 | ||
| 3fi4_A | 372 | P38 Kinase Crystal Structure In Complex With Ro4499 | 9e-09 | ||
| 3hng_A | 360 | Crystal Structure Of Vegfr1 In Complex With N-(4-ch | 9e-09 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-08 | ||
| 1lew_A | 360 | Crystal Structure Of Map Kinase P38 Complexed To Th | 1e-08 | ||
| 2fsl_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a+f3 | 1e-08 | ||
| 4hvd_A | 314 | Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h | 1e-08 | ||
| 2jgz_A | 289 | Crystal Structure Of Phospho-Cdk2 In Complex With C | 1e-08 | ||
| 3p4k_A | 370 | The Third Conformation Of P38a Map Kinase Observed | 1e-08 | ||
| 1bmk_A | 379 | The Complex Structure Of The Map Kinase P38SB218655 | 1e-08 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 1e-08 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 1e-08 | ||
| 2y8o_A | 362 | Crystal Structure Of Human P38alpha Complexed With | 1e-08 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 1e-08 | ||
| 3pjc_A | 315 | Crystal Structure Of Jak3 Complexed With A Potent A | 1e-08 | ||
| 2fso_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a) A | 1e-08 | ||
| 3tg1_A | 380 | Crystal Structure Of P38alpha In Complex With A Map | 1e-08 | ||
| 1ove_A | 366 | The Structure Of P38 Alpha In Complex With A Dihydr | 1e-08 | ||
| 2fst_X | 367 | Mitogen Activated Protein Kinase P38alpha (d176a+f3 | 1e-08 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 1e-08 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 1e-08 | ||
| 2baq_A | 365 | P38alpha Bound To Ro3201195 Length = 365 | 1e-08 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 1e-08 | ||
| 3lxk_A | 327 | Structural And Thermodynamic Characterization Of Th | 1e-08 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 1e-08 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 1e-08 | ||
| 2f9g_A | 353 | Crystal Structure Of Fus3 Phosphorylated On Tyr182 | 1e-08 | ||
| 3sls_A | 304 | Crystal Structure Of Human Mek-1 Kinase In Complex | 1e-08 | ||
| 2oza_B | 366 | Structure Of P38alpha Complex Length = 366 | 1e-08 | ||
| 2uv2_A | 287 | Crystal Structure Of Human Ste20-Like Kinase Bound | 1e-08 | ||
| 3gi3_A | 360 | Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana | 2e-08 | ||
| 3d83_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 2e-08 | ||
| 2gtm_A | 348 | Mutated Mouse P38 Map Kinase Domain In Complex With | 2e-08 | ||
| 3gcp_A | 360 | Human P38 Map Kinase In Complex With Sb203580 Lengt | 2e-08 | ||
| 2puu_A | 348 | Crystal Structure Of P38 Complex With 1-(5-Tert-But | 2e-08 | ||
| 3odz_X | 360 | Crystal Structure Of P38alpha Y323r Active Mutant L | 2e-08 | ||
| 3e92_A | 371 | Crystal Structure Of P38 Kinase In Complex With A B | 2e-08 | ||
| 2bal_A | 365 | P38alpha Map Kinase Bound To Pyrazoloamine Length = | 2e-08 | ||
| 3od6_X | 360 | Crystal Structure Of P38alpha Y323t Active Mutant L | 2e-08 | ||
| 3ody_X | 360 | Crystal Structure Of P38alpha Y323q Active Mutant L | 2e-08 | ||
| 2iwi_A | 312 | Crystal Structure Of The Human Pim2 In Complex With | 2e-08 | ||
| 3d7z_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 2e-08 | ||
| 3mpt_A | 371 | Crystal Structure Of P38 Kinase In Complex With A P | 2e-08 | ||
| 3oef_X | 360 | Crystal Structure Of Y323f Inactive Mutant Of P38al | 2e-08 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 2e-08 | ||
| 1oz1_A | 372 | P38 Mitogen-Activated Kinase In Complex With 4-Azai | 2e-08 | ||
| 2gfs_A | 372 | P38 Kinase Crystal Structure In Complex With Ro3201 | 2e-08 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 2e-08 | ||
| 3hvc_A | 362 | Crystal Structure Of Human P38alpha Map Kinase Leng | 2e-08 | ||
| 2baj_A | 365 | P38alpha Bound To Pyrazolourea Length = 365 | 2e-08 | ||
| 3hrb_A | 359 | P38 Kinase Crystal Structure In Complex With Small | 2e-08 | ||
| 2npq_A | 367 | A Novel Lipid Binding Site In The P38 Alpha Map Kin | 2e-08 | ||
| 3k3j_A | 362 | P38alpha Bound To Novel Dfg-Out Compound Pf-0041612 | 2e-08 | ||
| 1di9_A | 360 | The Structure Of P38 Mitogen-Activated Protein Kina | 2e-08 | ||
| 3uiu_A | 306 | Crystal Structure Of Apo-Pkr Kinase Domain Length = | 2e-08 | ||
| 1m7q_A | 366 | Crystal Structure Of P38 Map Kinase In Complex With | 2e-08 | ||
| 3zsg_A | 362 | X-Ray Structure Of P38alpha Bound To Tak-715 Length | 2e-08 | ||
| 3gcu_A | 360 | Human P38 Map Kinase In Complex With Rl48 Length = | 2e-08 | ||
| 2y4i_C | 395 | Ksr2-Mek1 Heterodimer Length = 395 | 2e-08 | ||
| 3gc9_A | 370 | The Structure Of P38beta C119s, C162s In Complex Wi | 2e-08 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 2e-08 | ||
| 3nnu_A | 354 | Crystal Structure Of P38 Alpha In Complex With Dp13 | 2e-08 | ||
| 3kq7_A | 380 | Structure Of Human P38alpha With N-[4-Methyl-3-(6-{ | 2e-08 | ||
| 1bl6_A | 379 | The Complex Structure Of The Map Kinase P38SB216995 | 2e-08 | ||
| 2lgc_A | 359 | Joint Nmr And X-Ray Refinement Reveals The Structur | 2e-08 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 2e-08 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 2e-08 | ||
| 3dt1_A | 383 | P38 Complexed With A Quinazoline Inhibitor Length = | 2e-08 | ||
| 1zzl_A | 351 | Crystal Structure Of P38 With Triazolopyridine Leng | 2e-08 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 2e-08 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 2e-08 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 2e-08 | ||
| 3s3i_A | 349 | P38 Kinase Crystal Structure In Complex With Small | 2e-08 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 2e-08 | ||
| 1ian_A | 366 | Human P38 Map Kinase Inhibitor Complex Length = 366 | 3e-08 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 3e-08 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 3e-08 | ||
| 3k3i_A | 350 | P38alpha Bound To Novel Dgf-Out Compound Pf-0021595 | 3e-08 | ||
| 3hec_A | 348 | P38 In Complex With Imatinib Length = 348 | 3e-08 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 3e-08 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 3e-08 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 3e-08 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 3e-08 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 3e-08 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 3e-08 | ||
| 2jfl_A | 325 | Crystal Structure Of Human Ste20-Like Kinase ( Diph | 3e-08 | ||
| 2a19_B | 284 | Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng | 3e-08 | ||
| 4ewq_A | 383 | Human P38 Alpha Mapk In Complex With A Pyridazine B | 3e-08 | ||
| 3mtl_A | 324 | Crystal Structure Of The Pctaire1 Kinase In Complex | 3e-08 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 3e-08 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 3e-08 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 3e-08 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 3e-08 | ||
| 3eqc_A | 360 | X-Ray Structure Of The Human Mitogen-Activated Prot | 3e-08 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 3e-08 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 4e-08 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 4e-08 | ||
| 1o6y_A | 299 | Catalytic Domain Of Pknb Kinase From Mycobacterium | 4e-08 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 4e-08 | ||
| 3gc8_A | 370 | The Structure Of P38beta C162s In Complex With A Di | 4e-08 | ||
| 1s9i_A | 354 | X-Ray Structure Of The Human Mitogen-Activated Prot | 4e-08 | ||
| 1yvj_A | 290 | Crystal Structure Of The Jak3 Kinase Domain In Comp | 5e-08 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 5e-08 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 5e-08 | ||
| 2y4i_B | 319 | Ksr2-Mek1 Heterodimer Length = 319 | 5e-08 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 5e-08 | ||
| 3orn_A | 307 | Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In | 5e-08 | ||
| 3mh2_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 5e-08 | ||
| 3dls_A | 335 | Crystal Structure Of Human Pas Kinase Bound To Adp | 5e-08 | ||
| 3vn9_A | 340 | Rifined Crystal Structure Of Non-Phosphorylated Map | 6e-08 | ||
| 3gp0_A | 348 | Crystal Structure Of Human Mitogen Activated Protei | 6e-08 | ||
| 2l0w_A | 138 | Solution Nmr Structure Of The N-Terminal Pas Domain | 6e-08 | ||
| 2l4r_A | 135 | Nmr Solution Structure Of The N-Terminal Pas Domain | 6e-08 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 6e-08 | ||
| 3hmn_A | 342 | Crystal Structure Of Human Mps1 Catalytic Domain In | 6e-08 | ||
| 3py3_A | 380 | Crystal Structure Of Phosphorylated P38alpha Map Ki | 6e-08 | ||
| 2l1m_A | 150 | Solution Structure Of The Eag Domain Of The Herg (K | 6e-08 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 6e-08 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 6e-08 | ||
| 3ika_A | 331 | Crystal Structure Of Egfr 696-1022 T790m Mutant Cov | 6e-08 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 7e-08 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 7e-08 | ||
| 2p55_A | 333 | X-Ray Structure Of The Human Mitogen-Activated Prot | 8e-08 | ||
| 3nnx_A | 354 | Crystal Structure Of Phosphorylated P38 Alpha In Co | 8e-08 | ||
| 4i24_A | 329 | Structure Of T790m Egfr Kinase Domain Co-crystalliz | 8e-08 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 8e-08 | ||
| 2jiu_A | 328 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 8e-08 | ||
| 2zmc_A | 390 | Crystal Structure Of Human Mitotic Checkpoint Kinas | 9e-08 | ||
| 2jit_A | 327 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 9e-08 | ||
| 1s9j_A | 341 | X-Ray Structure Of The Human Mitogen-Activated Prot | 9e-08 | ||
| 4g5p_A | 330 | Crystal Structure Of Egfr Kinase T790m In Complex W | 9e-08 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 9e-08 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 9e-08 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 1e-07 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 1e-07 | ||
| 2jiv_A | 328 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 1e-07 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 1e-07 | ||
| 3mbl_A | 328 | Crystal Structure Of The Human Mitogen-Activated Pr | 1e-07 | ||
| 3dv3_A | 322 | Mek1 With Pf-04622664 Bound Length = 322 | 1e-07 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 1e-07 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 1e-07 | ||
| 3uib_A | 362 | Map Kinase Lmampk10 From Leishmania Major In Comple | 1e-07 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 1e-07 | ||
| 3pg1_A | 362 | Map Kinase Lmampk10 From Leishmania Major (1.95 Ang | 1e-07 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 1e-07 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-07 | ||
| 3vjo_A | 334 | Crystal Structure Of The Wild-Type Egfr Kinase Doma | 1e-07 | ||
| 3llt_A | 360 | Crystal Structure Of Pf14_0431, Kinase Domain Lengt | 1e-07 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 1e-07 | ||
| 3gop_A | 361 | Crystal Structure Of The Egf Receptor Juxtamembrane | 1e-07 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 1e-07 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 1e-07 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 1e-07 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 1e-07 | ||
| 2gj3_A | 120 | Crystal Structure Of The Fad-Containing Pas Domain | 1e-07 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 2e-07 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 2e-07 | ||
| 2x9e_A | 317 | Human Mps1 In Complex With Nms-P715 Length = 317 | 2e-07 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 2e-07 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 2e-07 | ||
| 3dbq_A | 343 | Crystal Structure Of Ttk Kinase Domain Length = 343 | 2e-07 | ||
| 3o8p_A | 360 | Conformational Plasticity Of P38 Map Kinase Dfg Mot | 2e-07 | ||
| 3vqu_A | 320 | Crystal Structure Of Human Mps1 Catalytic Domain In | 2e-07 | ||
| 1xkk_A | 352 | Egfr Kinase Domain Complexed With A Quinazoline Inh | 2e-07 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 2e-07 | ||
| 3cek_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 2e-07 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 2e-07 | ||
| 3rgf_A | 405 | Crystal Structure Of Human Cdk8CYCC Length = 405 | 2e-07 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 2e-07 | ||
| 2j5f_A | 327 | Crystal Structure Of Egfr Kinase Domain In Complex | 2e-07 | ||
| 4i23_A | 329 | Crystal Structure Of The Wild-type Egfr Kinase Doma | 2e-07 | ||
| 4g5j_A | 330 | Crystal Structure Of Egfr Kinase In Complex With Bi | 2e-07 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 2e-07 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 2e-07 | ||
| 3ug1_A | 334 | Crystal Structure Of The Mutated Egfr Kinase Domain | 2e-07 | ||
| 3mh0_A | 360 | Mutagenesis Of P38 Map Kinase Eshtablishes Key Role | 2e-07 | ||
| 2j5e_A | 327 | Crystal Structure Of Egfr Kinase Domain In Complex | 2e-07 | ||
| 4eut_A | 396 | Structure Of Bx-795 Complexed With Unphosphorylated | 2e-07 | ||
| 2gs2_A | 330 | Crystal Structure Of The Active Egfr Kinase Domain | 3e-07 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 3e-07 | ||
| 1byw_A | 110 | Structure Of The N-Terminal Domain Of The Human-Erg | 3e-07 | ||
| 1m14_A | 333 | Tyrosine Kinase Domain From Epidermal Growth Factor | 3e-07 | ||
| 4an2_A | 301 | Crystal Structures Of Human Mek1 With Carboxamide-B | 3e-07 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 3e-07 | ||
| 4f99_A | 361 | Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti | 3e-07 | ||
| 3mh3_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 3e-07 | ||
| 4hjo_A | 337 | Crystal Structure Of The Inactive Egfr Tyrosine Kin | 3e-07 | ||
| 3eb0_A | 383 | Crystal Structure Of Cgd4_240 From Cryptosporidium | 3e-07 | ||
| 2zmd_A | 390 | Crystal Structure Of Human Mps1 Catalytic Domain T6 | 3e-07 | ||
| 2gs7_A | 330 | Crystal Structure Of The Inactive Egfr Kinase Domai | 3e-07 | ||
| 3juh_A | 335 | Crystal Structure Of A Mutant Of Human Protein Kina | 3e-07 | ||
| 3mh1_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 3e-07 | ||
| 1u5q_A | 348 | Crystal Structure Of The Tao2 Kinase Domain: Activa | 4e-07 | ||
| 3h9f_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 4e-07 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 4e-07 | ||
| 2gcd_A | 309 | Tao2 Kinase Domain-Staurosporine Structure Length = | 5e-07 | ||
| 4i21_A | 329 | Crystal Structure Of L858r + T790m Egfr Kinase Doma | 5e-07 | ||
| 1na7_A | 329 | Crystal Structure Of The Catalytic Subunit Of Human | 5e-07 | ||
| 3e3b_X | 339 | Crystal Structure Of Catalytic Subunit Of Human Pro | 5e-07 | ||
| 3ofm_A | 350 | Structure Of A Human Ck2alpha Prime, The Paralog Is | 5e-07 | ||
| 3lzb_A | 327 | Egfr Kinase Domain Complexed With An Imidazo[2,1-B] | 5e-07 | ||
| 4euu_A | 319 | Structure Of Bx-795 Complexed With Human Tbk1 Kinas | 5e-07 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 5e-07 | ||
| 1jwh_A | 337 | Crystal Structure Of Human Protein Kinase Ck2 Holoe | 6e-07 | ||
| 2r7i_A | 335 | Crystal Structure Of Catalytic Subunit Of Protein K | 6e-07 | ||
| 3h30_A | 334 | Crystal Structure Of The Catalytic Subunit Of Human | 6e-07 | ||
| 3mb6_A | 331 | Human Ck2 Catalytic Domain In Complex With A Difura | 6e-07 | ||
| 3u87_A | 349 | Structure Of A Chimeric Construct Of Human Ck2alpha | 6e-07 | ||
| 3nga_A | 333 | Human Ck2 Catalytic Domain In Complex With Cx-4945 | 6e-07 | ||
| 4dgl_C | 335 | Crystal Structure Of The Ck2 Tetrameric Holoenzyme | 6e-07 | ||
| 3q9w_A | 336 | Crystal Structure Of Human Ck2 Alpha In Complex Wit | 6e-07 | ||
| 3nsz_A | 330 | Human Ck2 Catalytic Domain In Complex With Amppn Le | 6e-07 | ||
| 1pjk_A | 334 | Crystal Structure Of A C-terminal Deletion Mutant O | 6e-07 | ||
| 3bqc_A | 335 | High Ph-Value Crystal Structure Of Emodin In Comple | 6e-07 | ||
| 4i1z_A | 329 | Crystal Structure Of The Monomeric (v948r) Form Of | 6e-07 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 6e-07 | ||
| 2zjw_A | 340 | Crystal Structure Of Human Ck2 Alpha Complexed With | 6e-07 | ||
| 3w2o_A | 331 | Egfr Kinase Domain T790m/l858r Mutant With Tak-285 | 7e-07 | ||
| 3q04_A | 328 | Crystal Structure Of The Apo-Form Of Human Ck2 Alph | 7e-07 | ||
| 2eb2_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (G7 | 7e-07 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 7e-07 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 7e-07 | ||
| 2eb3_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (L8 | 7e-07 | ||
| 2rfd_A | 324 | Crystal Structure Of The Complex Between The Egfr K | 7e-07 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 8e-07 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 8e-07 | ||
| 3bel_A | 315 | X-Ray Structure Of Egfr In Complex With Oxime Inhib | 8e-07 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 8e-07 | ||
| 3lmg_A | 344 | Crystal Structure Of The Erbb3 Kinase Domain In Com | 9e-07 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 9e-07 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 9e-07 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 9e-07 | ||
| 3p23_A | 432 | Crystal Structure Of The Human Kinase And Rnase Dom | 1e-06 | ||
| 3fme_A | 290 | Crystal Structure Of Human Mitogen-Activated Protei | 1e-06 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 1e-06 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 1e-06 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 1e-06 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 1e-06 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 1e-06 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 1e-06 | ||
| 3ll6_A | 337 | Crystal Structure Of The Human Cyclin G Associated | 1e-06 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-06 | ||
| 3ewk_A | 227 | Structure Of The Redox Sensor Domain Of Methylococc | 1e-06 | ||
| 3ewk_A | 227 | Structure Of The Redox Sensor Domain Of Methylococc | 3e-04 | ||
| 2itn_A | 327 | Crystal Structure Of Egfr Kinase Domain G719s Mutat | 1e-06 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 1e-06 | ||
| 2itt_A | 327 | Crystal Structure Of Egfr Kinase Domain L858r Mutat | 1e-06 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 1e-06 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 1e-06 | ||
| 4alu_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 2e-06 | ||
| 2wu6_A | 381 | Crystal Structure Of The Human Clk3 In Complex With | 2e-06 | ||
| 3cxw_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 2e-06 | ||
| 3a99_A | 320 | Structure Of Pim-1 Kinase Crystallized In The Prese | 2e-06 | ||
| 3uix_A | 298 | Crystal Structure Of Pim1 Kinase In Complex With Sm | 2e-06 | ||
| 3jxw_A | 294 | Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4- | 2e-06 | ||
| 2eu9_A | 355 | Crystal Structure Of Clk3 Length = 355 | 2e-06 | ||
| 4i20_A | 329 | Crystal Structure Of Monomeric (v948r) Primary Onco | 2e-06 | ||
| 1ywv_A | 293 | Crystal Structures Of Proto-Oncogene Kinase Pim1: A | 2e-06 | ||
| 1xws_A | 313 | Crystal Structure Of The Human Pim1 Kinase Domain L | 2e-06 | ||
| 2obj_A | 333 | Crystal Structure Of Human Pim-1 Kinase In Complex | 2e-06 | ||
| 3kex_A | 325 | Crystal Structure Of The Catalytically Inactive Kin | 2e-06 | ||
| 2exe_A | 357 | Crystal Structure Of The Phosphorylated Clk3 Length | 2e-06 | ||
| 1yxs_A | 293 | Crystal Structure Of Kinase Pim1 With P123m Mutatio | 2e-06 | ||
| 3f2a_A | 300 | Crystal Structure Of Human Pim-1 In Complex With Da | 2e-06 | ||
| 2xj0_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-4 Fro | 2e-06 | ||
| 1xqz_A | 300 | Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut | 2e-06 | ||
| 3r00_A | 299 | The Discovery Of Novel Benzofuran-2-Carboxylic Acid | 2e-06 | ||
| 2xix_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-1 Fro | 2e-06 | ||
| 4alv_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 2e-06 | ||
| 2xiy_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-2 Fro | 2e-06 | ||
| 2bil_B | 313 | The Human Protein Kinase Pim1 In Complex With Its C | 2e-06 | ||
| 3cy3_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 2e-06 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 2e-06 | ||
| 3dcv_A | 328 | Crystal Structure Of Human Pim1 Kinase Complexed Wi | 2e-06 | ||
| 2p0c_A | 313 | Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro | 2e-06 | ||
| 2bik_B | 313 | Human Pim1 Phosphorylated On Ser261 Length = 313 | 2e-06 | ||
| 3jpv_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 2e-06 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 2e-06 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 2e-06 | ||
| 3ma3_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 2e-06 | ||
| 2j2i_B | 312 | Crystal Structure Of The Humab Pim1 In Complex With | 2e-06 | ||
| 4a7c_A | 308 | Crystal Structure Of Pim1 Kinase With Etp46546 Leng | 2e-06 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 2e-06 | ||
| 4dtk_A | 276 | Novel And Selective Pan-Pim Kinase Inhibitor Length | 2e-06 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 2e-06 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 3e-06 | ||
| 1b6c_B | 342 | Crystal Structure Of The Cytoplasmic Domain Of The | 3e-06 | ||
| 3nr9_A | 368 | Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length | 3e-06 | ||
| 2p2h_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 3e-06 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 3e-06 | ||
| 4as0_A | 273 | Cyclometalated Phthalimides As Protein Kinase Inhib | 3e-06 | ||
| 1py5_A | 326 | Crystal Structure Of Tgf-Beta Receptor I Kinase Wit | 3e-06 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 3e-06 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 3e-06 | ||
| 3rp9_A | 458 | Crystal Structure Of The Apo Mapk From Toxoplasma G | 3e-06 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 3e-06 | ||
| 3ewh_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 3e-06 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 3e-06 | ||
| 3tzm_A | 309 | Tgf-Beta Receptor Type 1 In Complex With Sb431542 L | 4e-06 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 4e-06 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 4e-06 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 4e-06 | ||
| 3u6j_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 4e-06 | ||
| 3e3p_A | 360 | Glycogen Synthase Kinase From Leishmania Major Leng | 4e-06 | ||
| 1h4l_A | 292 | Structure And Regulation Of The Cdk5-P25(Nck5a) Com | 4e-06 | ||
| 2wot_A | 306 | Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl) | 4e-06 | ||
| 1vjy_A | 303 | Crystal Structure Of A Naphthyridine Inhibitor Of H | 4e-06 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 4e-06 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 4e-06 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 4e-06 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 4e-06 | ||
| 1rw8_A | 301 | Crystal Structure Of Tgf-Beta Receptor I Kinase Wit | 4e-06 | ||
| 4hgl_A | 330 | Crystal Structure Of Ck1g3 With Compound 1 Length = | 4e-06 | ||
| 1yhs_A | 273 | Crystal Structure Of Pim-1 Bound To Staurosporine L | 4e-06 | ||
| 2izr_A | 330 | Structure Of Casein Kinase Gamma 3 In Complex With | 5e-06 | ||
| 2chl_A | 351 | Structure Of Casein Kinase 1 Gamma 3 Length = 351 | 5e-06 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 5e-06 | ||
| 3kga_A | 299 | Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe | 5e-06 | ||
| 1z57_A | 339 | Crystal Structure Of Human Clk1 In Complex With 10z | 5e-06 | ||
| 3n9x_A | 432 | Crystal Structure Of Map Kinase From Plasmodium Ber | 5e-06 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 5e-06 | ||
| 2cmw_A | 310 | Structure Of Human Casein Kinase 1 Gamma-1 In Compl | 6e-06 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 6e-06 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 7e-06 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 7e-06 | ||
| 2dyl_A | 318 | Crystal Structure Of Human Mitogen-Activated Protei | 7e-06 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 7e-06 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 8e-06 | ||
| 1ywn_A | 316 | Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p | 8e-06 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 8e-06 | ||
| 3c4e_A | 273 | Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7 | 8e-06 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 8e-06 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 8e-06 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 8e-06 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 8e-06 | ||
| 2i6l_A | 320 | Crystal Structure Of Human Mitogen Activated Protei | 9e-06 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 9e-06 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 9e-06 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 9e-06 | ||
| 2p2i_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 9e-06 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 1e-05 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 1e-05 | ||
| 3bbt_B | 328 | Crystal Structure Of The Erbb4 Kinase In Complex Wi | 1e-05 | ||
| 4agc_A | 353 | Crystal Structure Of Vegfr2 (Juxtamembrane And Kina | 1e-05 | ||
| 2r4b_A | 321 | Erbb4 Kinase Domain Complexed With A Thienopyrimidi | 1e-05 | ||
| 1vr2_A | 316 | Human Vascular Endothelial Growth Factor Receptor 2 | 1e-05 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 1e-05 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 1e-05 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 1e-05 | ||
| 2xir_A | 316 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 1e-05 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 1e-05 | ||
| 3nie_A | 429 | Crystal Structure Of Pf11_0147 Length = 429 | 1e-05 | ||
| 1v0b_A | 288 | Crystal Structure Of The T198a Mutant Of Pfpk5 Leng | 1e-05 | ||
| 3qup_A | 323 | Inhibitor Bound Structure Of The Kinase Domain Of T | 1e-05 | ||
| 1ung_A | 292 | Structural Mechanism For The Inhibition Of Cdk5-P25 | 1e-05 | ||
| 1v0o_A | 288 | Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho | 2e-05 | ||
| 3my0_A | 305 | Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai | 2e-05 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 2e-05 | ||
| 3cjf_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 2e-05 | ||
| 4gt4_A | 308 | Structure Of Unliganded, Inactive Ror2 Kinase Domai | 2e-05 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 2e-05 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 2e-05 | ||
| 3cjg_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 2e-05 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 2e-05 | ||
| 1ob3_A | 288 | Structure Of P. Falciparum Pfpk5 Length = 288 | 2e-05 | ||
| 3zzw_A | 289 | Crystal Structure Of The Kinase Domain Of Ror2 Leng | 2e-05 | ||
| 2c47_A | 313 | Structure Of Casein Kinase 1 Gamma 2 Length = 313 | 2e-05 | ||
| 4bcf_A | 331 | Structure Of Cdk9 In Complex With Cyclin T And A 2- | 2e-05 | ||
| 4ec8_A | 373 | Structure Of Full Length Cdk9 In Complex With Cycli | 3e-05 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 3e-05 | ||
| 3mtf_A | 301 | Crystal Structure Of The Acvr1 Kinase In Complex Wi | 3e-05 | ||
| 3pvg_A | 331 | Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C | 3e-05 | ||
| 3anq_A | 368 | Human Dyrk1aINHIBITOR COMPLEX Length = 368 | 3e-05 | ||
| 3vhk_A | 368 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 3e-05 | ||
| 4dym_A | 301 | Crystal Structure Of The Acvr1 Kinase Domain In Com | 3e-05 | ||
| 1y6a_A | 366 | Crystal Structure Of Vegfr2 In Complex With A 2-Ani | 3e-05 | ||
| 2qc6_A | 332 | Protein Kinase Ck2 In Complex With Dbc Length = 332 | 3e-05 | ||
| 3blh_A | 331 | Crystal Structure Of Human Cdk9CYCLINT1 Length = 33 | 3e-05 | ||
| 2pvh_A | 352 | Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri | 3e-05 | ||
| 3h9r_A | 330 | Crystal Structure Of The Kinase Domain Of Type I Ac | 3e-05 | ||
| 1ds5_A | 332 | Dimeric Crystal Structure Of The Alpha Subunit In C | 4e-05 | ||
| 4anm_A | 335 | Complex Of Ck2 With A Cdc7 Inhibitor Length = 335 | 4e-05 | ||
| 2vag_A | 339 | Crystal Structure Of Di-Phosphorylated Human Clk1 I | 4e-05 | ||
| 2vx3_A | 382 | Crystal Structure Of The Human Dual Specificity Tyr | 4e-05 | ||
| 3mi9_A | 351 | Crystal Structure Of Hiv-1 Tat Complexed With Human | 4e-05 | ||
| 4dgn_A | 326 | Crystal Structure Of Maize Ck2 In Complex With The | 4e-05 | ||
| 4dgm_A | 326 | Crystal Structure Of Maize Ck2 In Complex With The | 4e-05 | ||
| 3kxg_A | 327 | Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun | 4e-05 | ||
| 4fl3_A | 635 | Structural And Biophysical Characterization Of The | 4e-05 | ||
| 1daw_A | 327 | Crystal Structure Of A Binary Complex Of Protein Ki | 4e-05 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 4e-05 | ||
| 1m2p_A | 325 | Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra | 5e-05 | ||
| 3vid_A | 356 | Crystal Structure Of Human Vegfr2 Kinase Domain Wit | 5e-05 | ||
| 3vhe_A | 359 | Crystal Structure Of Human Vegfr2 Kinase Domain Wit | 5e-05 | ||
| 3c7q_A | 316 | Structure Of Vegfr2 Kinase Domain In Complex With B | 5e-05 | ||
| 4fl2_A | 636 | Structural And Biophysical Characterization Of The | 5e-05 | ||
| 4aze_A | 382 | Human Dyrk1a In Complex With Leucettine L41 Length | 5e-05 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 5e-05 | ||
| 2oh4_A | 316 | Crystal Structure Of Vegfr2 With A Benzimidazole-Ur | 5e-05 | ||
| 3vnt_A | 318 | Crystal Structure Of The Kinase Domain Of Human Veg | 6e-05 | ||
| 1u54_A | 291 | Crystal Structures Of The Phosphorylated And Unphos | 7e-05 | ||
| 3srv_A | 277 | Crystal Structure Of Spleen Tyrosine Kinase (Syk) I | 7e-05 | ||
| 3pp0_A | 338 | Crystal Structure Of The Kinase Domain Of Human Her | 8e-05 | ||
| 3p1a_A | 311 | Structure Of Human Membrane-Associated Tyrosine- An | 8e-05 | ||
| 3tub_A | 293 | Crystal Structure Of Syk Kinase Domain With 1-(5-(6 | 8e-05 | ||
| 3vf8_A | 299 | Crystal Structure Of Spleen Tyrosine Kinase Syk Cat | 8e-05 | ||
| 3emg_A | 291 | Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami | 8e-05 | ||
| 3aln_A | 327 | Crystal Structure Of Human Non-Phosphorylated Mkk4 | 8e-05 | ||
| 4hzs_A | 341 | Crystal Structure Of Ack1 Kinase Domain With C-term | 9e-05 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 9e-05 | ||
| 1u46_A | 291 | Crystal Structure Of The Unphosphorylated Kinase Do | 9e-05 | ||
| 4f4p_A | 273 | Syk In Complex With Ligand Lasw836 Length = 273 | 1e-04 | ||
| 1xba_A | 291 | Crystal Structure Of Apo Syk Tyrosine Kinase Domain | 1e-04 | ||
| 3srv_B | 277 | Crystal Structure Of Spleen Tyrosine Kinase (Syk) I | 1e-04 | ||
| 4dfl_A | 274 | Crystal Structure Of Spleen Tyrosine Kinase Complex | 1e-04 | ||
| 4ewh_B | 275 | Co-Crystal Structure Of Ack1 With Inhibitor Length | 1e-04 | ||
| 4hzr_A | 277 | Crystal Structure Of Ack1 Kinase Domain Length = 27 | 1e-04 | ||
| 3eqp_B | 276 | Crystal Structure Of Ack1 With Compound T95 Length | 1e-04 | ||
| 3enm_A | 316 | The Structure Of The Map2k Mek6 Reveals An Autoinhi | 1e-04 | ||
| 4h1j_A | 293 | Crystal Structure Of Pyk2 With The Pyrazole 13a Len | 2e-04 | ||
| 4id7_A | 273 | Ack1 Kinase In Complex With The Inhibitor Cis-3-[8- | 2e-04 | ||
| 3cc6_A | 281 | Crystal Structure Of Kinase Domain Of Protein Tyros | 2e-04 | ||
| 3fzo_A | 277 | Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin | 2e-04 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 3e-04 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 3e-04 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 3e-04 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 3e-04 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 5e-04 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 5e-04 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 5e-04 | ||
| 2h34_A | 309 | Apoenzyme Crystal Structure Of The Tuberculosis Ser | 5e-04 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 5e-04 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 6e-04 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 6e-04 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 7e-04 |
| >pdb|2V1A|A Chain A, N- And C-Terminal Helices Of Oat Lov2 (404-546) Are Involved In Light-Induced Signal Transduction (Room Temperature (293k) Dark Structure Of Lov2 (404-546)) Length = 144 | Back alignment and structure |
|
| >pdb|2V0U|A Chain A, N- And C-terminal Helices Of Oat Lov2 (404-546) Are Involved In Light-induced Signal Transduction (cryo Dark Structure Of Lov2 (404-546)) Length = 146 | Back alignment and structure |
|
| >pdb|2WKP|A Chain A, Structure Of A Photoactivatable Rac1 Containing Lov2 Wildtype Length = 332 | Back alignment and structure |
|
| >pdb|2WKQ|A Chain A, Structure Of A Photoactivatable Rac1 Containing The Lov2 C450a Mutant Length = 332 | Back alignment and structure |
|
| >pdb|2WKR|A Chain A, Structure Of A Photoactivatable Rac1 Containing The Lov2 C450m Mutant Length = 332 | Back alignment and structure |
|
| >pdb|2Z6C|A Chain A, Crystal Structure Of Lov1 Domain Of Phototropin1 From Arabidopsis Thaliana Length = 129 | Back alignment and structure |
|
| >pdb|2Z6C|A Chain A, Crystal Structure Of Lov1 Domain Of Phototropin1 From Arabidopsis Thaliana Length = 129 | Back alignment and structure |
|
| >pdb|2Z6D|A Chain A, Crystal Structure Of Lov1 Domain Of Phototropin2 From Arabidopsis Thaliana Length = 130 | Back alignment and structure |
|
| >pdb|2Z6D|A Chain A, Crystal Structure Of Lov1 Domain Of Phototropin2 From Arabidopsis Thaliana Length = 130 | Back alignment and structure |
|
| >pdb|4EEP|A Chain A, Crystal Structure Of Lov2 Domain Of Arabidopsis Thaliana Phototropin 2 Length = 115 | Back alignment and structure |
|
| >pdb|4EER|A Chain A, Crystal Structure Of Lov2 Domain Of Arabidopsis Thaliana Phototropin 2 C426a Mutant Length = 115 | Back alignment and structure |
|
| >pdb|4EES|A Chain A, Crystal Structure Of Ilov Length = 115 | Back alignment and structure |
|
| >pdb|4EEU|A Chain A, Crystal Structure Of Philov2.1 Length = 118 | Back alignment and structure |
|
| >pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327 | Back alignment and structure |
|
| >pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327 | Back alignment and structure |
|
| >pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446 | Back alignment and structure |
|
| >pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446 | Back alignment and structure |
|
| >pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341 | Back alignment and structure |
|
| >pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342 | Back alignment and structure |
|
| >pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355 | Back alignment and structure |
|
| >pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339 | Back alignment and structure |
|
| >pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315 | Back alignment and structure |
|
| >pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342 | Back alignment and structure |
|
| >pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337 | Back alignment and structure |
|
| >pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|1G28|A Chain A, Structure Of A Flavin-Binding Domain, Lov2, From The Chimeric PhytochromePHOTOTROPIN PHOTORECEPTOR PHY3 Length = 104 | Back alignment and structure |
|
| >pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396 | Back alignment and structure |
|
| >pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350 | Back alignment and structure |
|
| >pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350 | Back alignment and structure |
|
| >pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373 | Back alignment and structure |
|
| >pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336 | Back alignment and structure |
|
| >pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351 | Back alignment and structure |
|
| >pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350 | Back alignment and structure |
|
| >pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350 | Back alignment and structure |
|
| >pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350 | Back alignment and structure |
|
| >pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345 | Back alignment and structure |
|
| >pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351 | Back alignment and structure |
|
| >pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350 | Back alignment and structure |
|
| >pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351 | Back alignment and structure |
|
| >pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350 | Back alignment and structure |
|
| >pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350 | Back alignment and structure |
|
| >pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350 | Back alignment and structure |
|
| >pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350 | Back alignment and structure |
|
| >pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351 | Back alignment and structure |
|
| >pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351 | Back alignment and structure |
|
| >pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350 | Back alignment and structure |
|
| >pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351 | Back alignment and structure |
|
| >pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351 | Back alignment and structure |
|
| >pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364 | Back alignment and structure |
|
| >pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371 | Back alignment and structure |
|
| >pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371 | Back alignment and structure |
|
| >pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350 | Back alignment and structure |
|
| >pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350 | Back alignment and structure |
|
| >pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350 | Back alignment and structure |
|
| >pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351 | Back alignment and structure |
|
| >pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350 | Back alignment and structure |
|
| >pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350 | Back alignment and structure |
|
| >pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345 | Back alignment and structure |
|
| >pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350 | Back alignment and structure |
|
| >pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350 | Back alignment and structure |
|
| >pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351 | Back alignment and structure |
|
| >pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351 | Back alignment and structure |
|
| >pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350 | Back alignment and structure |
|
| >pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371 | Back alignment and structure |
|
| >pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337 | Back alignment and structure |
|
| >pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350 | Back alignment and structure |
|
| >pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350 | Back alignment and structure |
|
| >pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415 | Back alignment and structure |
|
| >pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433 | Back alignment and structure |
|
| >pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437 | Back alignment and structure |
|
| >pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674 | Back alignment and structure |
|
| >pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353 | Back alignment and structure |
|
| >pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360 | Back alignment and structure |
|
| >pdb|1N9L|A Chain A, Crystal Structure Of The Phot-lov1 Domain From Chlamydomonas Reinhardtii In The Dark State. Length = 109 | Back alignment and structure |
|
| >pdb|1N9L|A Chain A, Crystal Structure Of The Phot-lov1 Domain From Chlamydomonas Reinhardtii In The Dark State. Length = 109 | Back alignment and structure |
|
| >pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402 | Back alignment and structure |
|
| >pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410 | Back alignment and structure |
|
| >pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415 | Back alignment and structure |
|
| >pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406 | Back alignment and structure |
|
| >pdb|3ULF|A Chain A, The Light State Structure Of The Blue-light Photoreceptor Aureochrome1 Lov Length = 170 | Back alignment and structure |
|
| >pdb|3UE6|A Chain A, The Dark Structure Of The Blue-light Photoreceptor Aureochrome1 Lov Length = 166 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412 | Back alignment and structure |
|
| >pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689 | Back alignment and structure |
|
| >pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|3T50|A Chain A, X-Ray Structure Of The Lov Domain From The Lov-Hk Sensory Protein From Brucella Abortus (Dark State). Length = 128 | Back alignment and structure |
|
| >pdb|2PR5|A Chain A, Structural Basis For Light-dependent Signaling In The Dimeric Lov Photosensor Ytva (dark Structure) Length = 132 | Back alignment and structure |
|
| >pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543 | Back alignment and structure |
|
| >pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543 | Back alignment and structure |
|
| >pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543 | Back alignment and structure |
|
| >pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|3P7N|A Chain A, Crystal Structure Of Light Activated Transcription Factor El222 From Erythrobacter Litoralis Length = 258 | Back alignment and structure |
|
| >pdb|3P7N|A Chain A, Crystal Structure Of Light Activated Transcription Factor El222 From Erythrobacter Litoralis Length = 258 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|3RH8|B Chain B, Crystal Structure Of The Light-State Dimer Of Fungal Blue-Light Photoreceptor Vivid Length = 148 | Back alignment and structure |
|
| >pdb|3HJK|A Chain A, 2.0 Angstrom Structure Of The Ile74val Variant Of Vivid (Vvd). Length = 154 | Back alignment and structure |
|
| >pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332 | Back alignment and structure |
|
| >pdb|3HJI|A Chain A, 1.8 Angstrom Crystal Structure Of The I74v:i85v Variant Of Vivid (Vvd). Length = 154 | Back alignment and structure |
|
| >pdb|3IS2|B Chain B, 2.3 Angstrom Crystal Structure Of A Cys71 Sulfenic Acid Form Of Vivid Length = 154 | Back alignment and structure |
|
| >pdb|3IS2|A Chain A, 2.3 Angstrom Crystal Structure Of A Cys71 Sulfenic Acid Form Of Vivid Length = 154 | Back alignment and structure |
|
| >pdb|2PD8|A Chain A, 1.8 Angstrom Crystal Structure Of The Cys71ser Mutant Of Vivid Length = 149 | Back alignment and structure |
|
| >pdb|2PD7|A Chain A, 2.0 Angstrom Crystal Structure Of The Fungal Blue-Light Photoreceptor Vivid Length = 149 | Back alignment and structure |
|
| >pdb|3D72|A Chain A, 1.65 Angstrom Crystal Structure Of The Cys71val Variant In The Fungal Photoreceptor Vvd Length = 149 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334 | Back alignment and structure |
|
| >pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283 | Back alignment and structure |
|
| >pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362 | Back alignment and structure |
|
| >pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304 | Back alignment and structure |
|
| >pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362 | Back alignment and structure |
|
| >pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298 | Back alignment and structure |
|
| >pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284 | Back alignment and structure |
|
| >pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362 | Back alignment and structure |
|
| >pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349 | Back alignment and structure |
|
| >pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361 | Back alignment and structure |
|
| >pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346 | Back alignment and structure |
|
| >pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330 | Back alignment and structure |
|
| >pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334 | Back alignment and structure |
|
| >pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326 | Back alignment and structure |
|
| >pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312 | Back alignment and structure |
|
| >pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | Back alignment and structure |
|
| >pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288 | Back alignment and structure |
|
| >pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321 | Back alignment and structure |
|
| >pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285 | Back alignment and structure |
|
| >pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321 | Back alignment and structure |
|
| >pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293 | Back alignment and structure |
|
| >pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294 | Back alignment and structure |
|
| >pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295 | Back alignment and structure |
|
| >pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295 | Back alignment and structure |
|
| >pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321 | Back alignment and structure |
|
| >pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278 | Back alignment and structure |
|
| >pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | Back alignment and structure |
|
| >pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361 | Back alignment and structure |
|
| >pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334 | Back alignment and structure |
|
| >pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342 | Back alignment and structure |
|
| >pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323 | Back alignment and structure |
|
| >pdb|3SW1|A Chain A, Structure Of A Full-Length Bacterial Lov Protein Length = 162 | Back alignment and structure |
|
| >pdb|3SW1|A Chain A, Structure Of A Full-Length Bacterial Lov Protein Length = 162 | Back alignment and structure |
|
| >pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322 | Back alignment and structure |
|
| >pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323 | Back alignment and structure |
|
| >pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322 | Back alignment and structure |
|
| >pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329 | Back alignment and structure |
|
| >pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327 | Back alignment and structure |
|
| >pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677 | Back alignment and structure |
|
| >pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419 | Back alignment and structure |
|
| >pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443 | Back alignment and structure |
|
| >pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676 | Back alignment and structure |
|
| >pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335 | Back alignment and structure |
|
| >pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315 | Back alignment and structure |
|
| >pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277 | Back alignment and structure |
|
| >pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295 | Back alignment and structure |
|
| >pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
| >pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311 | Back alignment and structure |
|
| >pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311 | Back alignment and structure |
|
| >pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467 | Back alignment and structure |
|
| >pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491 | Back alignment and structure |
|
| >pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573 | Back alignment and structure |
|
| >pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294 | Back alignment and structure |
|
| >pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336 | Back alignment and structure |
|
| >pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327 | Back alignment and structure |
|
| >pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362 | Back alignment and structure |
|
| >pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301 | Back alignment and structure |
|
| >pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317 | Back alignment and structure |
|
| >pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317 | Back alignment and structure |
|
| >pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316 | Back alignment and structure |
|
| >pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269 | Back alignment and structure |
|
| >pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284 | Back alignment and structure |
|
| >pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373 | Back alignment and structure |
|
| >pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444 | Back alignment and structure |
|
| >pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319 | Back alignment and structure |
|
| >pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325 | Back alignment and structure |
|
| >pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351 | Back alignment and structure |
|
| >pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277 | Back alignment and structure |
|
| >pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294 | Back alignment and structure |
|
| >pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336 | Back alignment and structure |
|
| >pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314 | Back alignment and structure |
|
| >pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504 | Back alignment and structure |
|
| >pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285 | Back alignment and structure |
|
| >pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317 | Back alignment and structure |
|
| >pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486 | Back alignment and structure |
|
| >pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322 | Back alignment and structure |
|
| >pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323 | Back alignment and structure |
|
| >pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305 | Back alignment and structure |
|
| >pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484 | Back alignment and structure |
|
| >pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297 | Back alignment and structure |
|
| >pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289 | Back alignment and structure |
|
| >pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295 | Back alignment and structure |
|
| >pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508 | Back alignment and structure |
|
| >pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507 | Back alignment and structure |
|
| >pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276 | Back alignment and structure |
|
| >pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303 | Back alignment and structure |
|
| >pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278 | Back alignment and structure |
|
| >pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276 | Back alignment and structure |
|
| >pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268 | Back alignment and structure |
|
| >pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271 | Back alignment and structure |
|
| >pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287 | Back alignment and structure |
|
| >pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286 | Back alignment and structure |
|
| >pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269 | Back alignment and structure |
|
| >pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361 | Back alignment and structure |
|
| >pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345 | Back alignment and structure |
|
| >pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298 | Back alignment and structure |
|
| >pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364 | Back alignment and structure |
|
| >pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420 | Back alignment and structure |
|
| >pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | Back alignment and structure |
|
| >pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424 | Back alignment and structure |
|
| >pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465 | Back alignment and structure |
|
| >pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414 | Back alignment and structure |
|
| >pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299 | Back alignment and structure |
|
| >pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484 | Back alignment and structure |
|
| >pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388 | Back alignment and structure |
|
| >pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391 | Back alignment and structure |
|
| >pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352 | Back alignment and structure |
|
| >pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400 | Back alignment and structure |
|
| >pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350 | Back alignment and structure |
|
| >pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406 | Back alignment and structure |
|
| >pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310 | Back alignment and structure |
|
| >pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348 | Back alignment and structure |
|
| >pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356 | Back alignment and structure |
|
| >pdb|4HIA|A Chain A, Crystal Structure Of Rhodobacter Sphaeroides Lov Protein Length = 176 | Back alignment and structure |
|
| >pdb|4HIA|A Chain A, Crystal Structure Of Rhodobacter Sphaeroides Lov Protein Length = 176 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|4HJ3|A Chain A, Crystal Structure Of Rhodobacter Sphaeroides Lov Protein Length = 176 | Back alignment and structure |
|
| >pdb|4HJ3|A Chain A, Crystal Structure Of Rhodobacter Sphaeroides Lov Protein Length = 176 | Back alignment and structure |
|
| >pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326 | Back alignment and structure |
|
| >pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364 | Back alignment and structure |
|
| >pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334 | Back alignment and structure |
|
| >pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464 | Back alignment and structure |
|
| >pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430 | Back alignment and structure |
|
| >pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360 | Back alignment and structure |
|
| >pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|4HJ6|A Chain A, Crystal Structure Of Rhodobacter Sphaeroides Lov Protein Length = 178 | Back alignment and structure |
|
| >pdb|4HJ6|A Chain A, Crystal Structure Of Rhodobacter Sphaeroides Lov Protein Length = 178 | Back alignment and structure |
|
| >pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318 | Back alignment and structure |
|
| >pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325 | Back alignment and structure |
|
| >pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324 | Back alignment and structure |
|
| >pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327 | Back alignment and structure |
|
| >pdb|4HJ4|A Chain A, Crystal Structure Of Rhodobacter Sphaeroides Lov Protein Length = 177 | Back alignment and structure |
|
| >pdb|4HJ4|A Chain A, Crystal Structure Of Rhodobacter Sphaeroides Lov Protein Length = 177 | Back alignment and structure |
|
| >pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320 | Back alignment and structure |
|
| >pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319 | Back alignment and structure |
|
| >pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386 | Back alignment and structure |
|
| >pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367 | Back alignment and structure |
|
| >pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364 | Back alignment and structure |
|
| >pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363 | Back alignment and structure |
|
| >pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382 | Back alignment and structure |
|
| >pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365 | Back alignment and structure |
|
| >pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362 | Back alignment and structure |
|
| >pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378 | Back alignment and structure |
|
| >pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423 | Back alignment and structure |
|
| >pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371 | Back alignment and structure |
|
| >pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364 | Back alignment and structure |
|
| >pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356 | Back alignment and structure |
|
| >pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350 | Back alignment and structure |
|
| >pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356 | Back alignment and structure |
|
| >pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389 | Back alignment and structure |
|
| >pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355 | Back alignment and structure |
|
| >pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350 | Back alignment and structure |
|
| >pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332 | Back alignment and structure |
|
| >pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356 | Back alignment and structure |
|
| >pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352 | Back alignment and structure |
|
| >pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353 | Back alignment and structure |
|
| >pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350 | Back alignment and structure |
|
| >pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326 | Back alignment and structure |
|
| >pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349 | Back alignment and structure |
|
| >pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295 | Back alignment and structure |
|
| >pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369 | Back alignment and structure |
|
| >pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353 | Back alignment and structure |
|
| >pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371 | Back alignment and structure |
|
| >pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308 | Back alignment and structure |
|
| >pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355 | Back alignment and structure |
|
| >pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353 | Back alignment and structure |
|
| >pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371 | Back alignment and structure |
|
| >pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368 | Back alignment and structure |
|
| >pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368 | Back alignment and structure |
|
| >pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360 | Back alignment and structure |
|
| >pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302 | Back alignment and structure |
|
| >pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358 | Back alignment and structure |
|
| >pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364 | Back alignment and structure |
|
| >pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366 | Back alignment and structure |
|
| >pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357 | Back alignment and structure |
|
| >pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364 | Back alignment and structure |
|
| >pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360 | Back alignment and structure |
|
| >pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293 | Back alignment and structure |
|
| >pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | Back alignment and structure |
|
| >pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279 | Back alignment and structure |
|
| >pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279 | Back alignment and structure |
|
| >pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360 | Back alignment and structure |
|
| >pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400 | Back alignment and structure |
|
| >pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360 | Back alignment and structure |
|
| >pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356 | Back alignment and structure |
|
| >pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429 | Back alignment and structure |
|
| >pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279 | Back alignment and structure |
|
| >pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394 | Back alignment and structure |
|
| >pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429 | Back alignment and structure |
|
| >pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369 | Back alignment and structure |
|
| >pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370 | Back alignment and structure |
|
| >pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417 | Back alignment and structure |
|
| >pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371 | Back alignment and structure |
|
| >pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379 | Back alignment and structure |
|
| >pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370 | Back alignment and structure |
|
| >pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358 | Back alignment and structure |
|
| >pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382 | Back alignment and structure |
|
| >pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282 | Back alignment and structure |
|
| >pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656 | Back alignment and structure |
|
| >pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281 | Back alignment and structure |
|
| >pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | Back alignment and structure |
|
| >pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304 | Back alignment and structure |
|
| >pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309 | Back alignment and structure |
|
| >pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276 | Back alignment and structure |
|
| >pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346 | Back alignment and structure |
|
| >pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311 | Back alignment and structure |
|
| >pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398 | Back alignment and structure |
|
| >pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306 | Back alignment and structure |
|
| >pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442 | Back alignment and structure |
|
| >pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300 | Back alignment and structure |
|
| >pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | Back alignment and structure |
|
| >pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302 | Back alignment and structure |
|
| >pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299 | Back alignment and structure |
|
| >pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300 | Back alignment and structure |
|
| >pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297 | Back alignment and structure |
|
| >pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296 | Back alignment and structure |
|
| >pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303 | Back alignment and structure |
|
| >pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306 | Back alignment and structure |
|
| >pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348 | Back alignment and structure |
|
| >pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298 | Back alignment and structure |
|
| >pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299 | Back alignment and structure |
|
| >pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367 | Back alignment and structure |
|
| >pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298 | Back alignment and structure |
|
| >pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317 | Back alignment and structure |
|
| >pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325 | Back alignment and structure |
|
| >pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350 | Back alignment and structure |
|
| >pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372 | Back alignment and structure |
|
| >pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360 | Back alignment and structure |
|
| >pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367 | Back alignment and structure |
|
| >pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314 | Back alignment and structure |
|
| >pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289 | Back alignment and structure |
|
| >pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370 | Back alignment and structure |
|
| >pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315 | Back alignment and structure |
|
| >pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380 | Back alignment and structure |
|
| >pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366 | Back alignment and structure |
|
| >pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353 | Back alignment and structure |
|
| >pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304 | Back alignment and structure |
|
| >pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366 | Back alignment and structure |
|
| >pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348 | Back alignment and structure |
|
| >pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360 | Back alignment and structure |
|
| >pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348 | Back alignment and structure |
|
| >pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365 | Back alignment and structure |
|
| >pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312 | Back alignment and structure |
|
| >pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362 | Back alignment and structure |
|
| >pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365 | Back alignment and structure |
|
| >pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367 | Back alignment and structure |
|
| >pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362 | Back alignment and structure |
|
| >pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360 | Back alignment and structure |
|
| >pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362 | Back alignment and structure |
|
| >pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360 | Back alignment and structure |
|
| >pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395 | Back alignment and structure |
|
| >pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354 | Back alignment and structure |
|
| >pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379 | Back alignment and structure |
|
| >pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350 | Back alignment and structure |
|
| >pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284 | Back alignment and structure |
|
| >pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370 | Back alignment and structure |
|
| >pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354 | Back alignment and structure |
|
| >pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307 | Back alignment and structure |
|
| >pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335 | Back alignment and structure |
|
| >pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340 | Back alignment and structure |
|
| >pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348 | Back alignment and structure |
|
| >pdb|2L0W|A Chain A, Solution Nmr Structure Of The N-Terminal Pas Domain Of Herg Potassium Channel Length = 138 | Back alignment and structure |
|
| >pdb|2L4R|A Chain A, Nmr Solution Structure Of The N-Terminal Pas Domain Of Herg Length = 135 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342 | Back alignment and structure |
|
| >pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|2L1M|A Chain A, Solution Structure Of The Eag Domain Of The Herg (Kv11.1) K+ Channel Length = 150 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333 | Back alignment and structure |
|
| >pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354 | Back alignment and structure |
|
| >pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328 | Back alignment and structure |
|
| >pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390 | Back alignment and structure |
|
| >pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327 | Back alignment and structure |
|
| >pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341 | Back alignment and structure |
|
| >pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328 | Back alignment and structure |
|
| >pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|2GJ3|A Chain A, Crystal Structure Of The Fad-Containing Pas Domain Of The Protein Nifl From Azotobacter Vinelandii. Length = 120 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343 | Back alignment and structure |
|
| >pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360 | Back alignment and structure |
|
| >pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320 | Back alignment and structure |
|
| >pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327 | Back alignment and structure |
|
| >pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329 | Back alignment and structure |
|
| >pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334 | Back alignment and structure |
|
| >pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327 | Back alignment and structure |
|
| >pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396 | Back alignment and structure |
|
| >pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|1BYW|A Chain A, Structure Of The N-Terminal Domain Of The Human-Erg Potassium Channel Length = 110 | Back alignment and structure |
|
| >pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333 | Back alignment and structure |
|
| >pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361 | Back alignment and structure |
|
| >pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337 | Back alignment and structure |
|
| >pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383 | Back alignment and structure |
|
| >pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390 | Back alignment and structure |
|
| >pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330 | Back alignment and structure |
|
| >pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335 | Back alignment and structure |
|
| >pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348 | Back alignment and structure |
|
| >pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309 | Back alignment and structure |
|
| >pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329 | Back alignment and structure |
|
| >pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329 | Back alignment and structure |
|
| >pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339 | Back alignment and structure |
|
| >pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350 | Back alignment and structure |
|
| >pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327 | Back alignment and structure |
|
| >pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337 | Back alignment and structure |
|
| >pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335 | Back alignment and structure |
|
| >pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334 | Back alignment and structure |
|
| >pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331 | Back alignment and structure |
|
| >pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349 | Back alignment and structure |
|
| >pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333 | Back alignment and structure |
|
| >pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335 | Back alignment and structure |
|
| >pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336 | Back alignment and structure |
|
| >pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330 | Back alignment and structure |
|
| >pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334 | Back alignment and structure |
|
| >pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335 | Back alignment and structure |
|
| >pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340 | Back alignment and structure |
|
| >pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331 | Back alignment and structure |
|
| >pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328 | Back alignment and structure |
|
| >pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432 | Back alignment and structure |
|
| >pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3EWK|A Chain A, Structure Of The Redox Sensor Domain Of Methylococcus Capsulatus (Bath) Mmos Length = 227 | Back alignment and structure |
|
| >pdb|3EWK|A Chain A, Structure Of The Redox Sensor Domain Of Methylococcus Capsulatus (Bath) Mmos Length = 227 | Back alignment and structure |
|
| >pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381 | Back alignment and structure |
|
| >pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314 | Back alignment and structure |
|
| >pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320 | Back alignment and structure |
|
| >pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294 | Back alignment and structure |
|
| >pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355 | Back alignment and structure |
|
| >pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329 | Back alignment and structure |
|
| >pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293 | Back alignment and structure |
|
| >pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313 | Back alignment and structure |
|
| >pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325 | Back alignment and structure |
|
| >pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357 | Back alignment and structure |
|
| >pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293 | Back alignment and structure |
|
| >pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300 | Back alignment and structure |
|
| >pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300 | Back alignment and structure |
|
| >pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299 | Back alignment and structure |
|
| >pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313 | Back alignment and structure |
|
| >pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328 | Back alignment and structure |
|
| >pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313 | Back alignment and structure |
|
| >pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313 | Back alignment and structure |
|
| >pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313 | Back alignment and structure |
|
| >pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312 | Back alignment and structure |
|
| >pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342 | Back alignment and structure |
|
| >pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368 | Back alignment and structure |
|
| >pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273 | Back alignment and structure |
|
| >pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360 | Back alignment and structure |
|
| >pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292 | Back alignment and structure |
|
| >pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306 | Back alignment and structure |
|
| >pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1 Length = 330 | Back alignment and structure |
|
| >pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273 | Back alignment and structure |
|
| >pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With Inhibitor Length = 330 | Back alignment and structure |
|
| >pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3 Length = 351 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299 | Back alignment and structure |
|
| >pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339 | Back alignment and structure |
|
| >pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With 2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9- Isopropylpurine (Casp Target) Length = 310 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328 | Back alignment and structure |
|
| >pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353 | Back alignment and structure |
|
| >pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321 | Back alignment and structure |
|
| >pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429 | Back alignment and structure |
|
| >pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323 | Back alignment and structure |
|
| >pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292 | Back alignment and structure |
|
| >pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288 | Back alignment and structure |
|
| >pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289 | Back alignment and structure |
|
| >pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2 Length = 313 | Back alignment and structure |
|
| >pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331 | Back alignment and structure |
|
| >pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331 | Back alignment and structure |
|
| >pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368 | Back alignment and structure |
|
| >pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368 | Back alignment and structure |
|
| >pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301 | Back alignment and structure |
|
| >pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332 | Back alignment and structure |
|
| >pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331 | Back alignment and structure |
|
| >pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352 | Back alignment and structure |
|
| >pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330 | Back alignment and structure |
|
| >pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332 | Back alignment and structure |
|
| >pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339 | Back alignment and structure |
|
| >pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382 | Back alignment and structure |
|
| >pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351 | Back alignment and structure |
|
| >pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326 | Back alignment and structure |
|
| >pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326 | Back alignment and structure |
|
| >pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327 | Back alignment and structure |
|
| >pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635 | Back alignment and structure |
|
| >pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325 | Back alignment and structure |
|
| >pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356 | Back alignment and structure |
|
| >pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316 | Back alignment and structure |
|
| >pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636 | Back alignment and structure |
|
| >pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316 | Back alignment and structure |
|
| >pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318 | Back alignment and structure |
|
| >pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291 | Back alignment and structure |
|
| >pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277 | Back alignment and structure |
|
| >pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338 | Back alignment and structure |
|
| >pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311 | Back alignment and structure |
|
| >pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293 | Back alignment and structure |
|
| >pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299 | Back alignment and structure |
|
| >pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291 | Back alignment and structure |
|
| >pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291 | Back alignment and structure |
|
| >pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273 | Back alignment and structure |
|
| >pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277 | Back alignment and structure |
|
| >pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274 | Back alignment and structure |
|
| >pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277 | Back alignment and structure |
|
| >pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276 | Back alignment and structure |
|
| >pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316 | Back alignment and structure |
|
| >pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293 | Back alignment and structure |
|
| >pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273 | Back alignment and structure |
|
| >pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281 | Back alignment and structure |
|
| >pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 975 | |||
| 1uu3_A | 310 | HPDK1, 3-phosphoinositide dependent protein kinase | 1e-101 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 5e-97 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 7e-97 | |
| 3g51_A | 325 | Ribosomal protein S6 kinase alpha-3; N-terminal ki | 1e-96 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 8e-96 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 3e-95 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 4e-95 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 1e-94 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 7e-94 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 1e-93 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 1e-93 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 4e-93 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 9e-93 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 3e-92 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 3e-91 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 2e-90 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 2e-90 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 8e-90 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 2e-89 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 8e-88 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 1e-87 | |
| 3pvu_A | 695 | Beta-adrenergic receptor kinase 1; transferase, se | 6e-85 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 2e-71 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 8e-71 | |
| 2wkq_A | 332 | NPH1-1, RAS-related C3 botulinum toxin substrate 1 | 1e-65 | |
| 2wkq_A | 332 | NPH1-1, RAS-related C3 botulinum toxin substrate 1 | 3e-40 | |
| 2v0u_A | 146 | NPH1-1, LOV2; kinase, transferase, ATP-binding, se | 7e-65 | |
| 2v0u_A | 146 | NPH1-1, LOV2; kinase, transferase, ATP-binding, se | 3e-54 | |
| 2z6d_A | 130 | Phototropin-2; PAS-fold, LOV-fold, alternative spl | 2e-62 | |
| 2z6d_A | 130 | Phototropin-2; PAS-fold, LOV-fold, alternative spl | 1e-56 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 4e-61 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 1e-60 | |
| 4eet_B | 115 | Phototropin-2; LOV, blue light photoreceptor, sign | 1e-59 | |
| 4eet_B | 115 | Phototropin-2; LOV, blue light photoreceptor, sign | 8e-55 | |
| 3ue6_A | 166 | Aureochrome1; PAS/LOV domain, FMN-binding blue-lig | 5e-59 | |
| 3ue6_A | 166 | Aureochrome1; PAS/LOV domain, FMN-binding blue-lig | 3e-54 | |
| 1n9l_A | 109 | PHOT-LOV1, putative blue light receptor; phototrop | 4e-58 | |
| 1n9l_A | 109 | PHOT-LOV1, putative blue light receptor; phototrop | 9e-56 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 5e-58 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 1e-57 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 2e-56 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 5e-56 | |
| 3p7n_A | 258 | Sensor histidine kinase; LOV domain, light-activat | 9e-56 | |
| 3p7n_A | 258 | Sensor histidine kinase; LOV domain, light-activat | 3e-54 | |
| 3t50_A | 128 | Blue-light-activated histidine kinase; PAS superfa | 3e-55 | |
| 3t50_A | 128 | Blue-light-activated histidine kinase; PAS superfa | 8e-53 | |
| 2l0w_A | 138 | Potassium voltage-gated channel, subfamily H (EAG | 5e-55 | |
| 2l0w_A | 138 | Potassium voltage-gated channel, subfamily H (EAG | 2e-52 | |
| 3sw1_A | 162 | Sensory box protein; light-oxygen-voltage, LOV, PA | 2e-53 | |
| 3sw1_A | 162 | Sensory box protein; light-oxygen-voltage, LOV, PA | 2e-53 | |
| 1byw_A | 110 | Protein (human ERG potassium channel); PAS domain, | 2e-53 | |
| 1byw_A | 110 | Protein (human ERG potassium channel); PAS domain, | 1e-52 | |
| 2pr5_A | 132 | Blue-light photoreceptor; light-oxygen-voltage, LO | 4e-53 | |
| 2pr5_A | 132 | Blue-light photoreceptor; light-oxygen-voltage, LO | 3e-50 | |
| 3d72_A | 149 | Vivid PAS protein VVD; circadian, photoreceptor, b | 7e-52 | |
| 3d72_A | 149 | Vivid PAS protein VVD; circadian, photoreceptor, b | 4e-49 | |
| 4apc_A | 350 | Serine/threonine-protein kinase NEK1; transferase; | 9e-52 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 7e-49 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 1e-48 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 2e-48 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 2e-48 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 2e-48 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 3e-48 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 6e-48 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 2e-47 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 4e-47 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 6e-47 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 6e-47 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 7e-47 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 7e-47 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 1e-46 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 1e-46 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 2e-46 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 2e-46 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 3e-46 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 4e-46 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 5e-46 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 6e-46 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 6e-46 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 6e-46 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 7e-46 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 8e-46 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 9e-46 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 1e-45 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 1e-45 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 2e-45 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 2e-45 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 3e-45 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 4e-45 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 1e-44 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 1e-44 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 1e-44 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 1e-44 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 2e-44 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 3e-44 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 3e-44 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 5e-44 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 1e-43 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 2e-43 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 2e-43 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 2e-43 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 4e-43 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 4e-43 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 5e-43 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 9e-43 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 1e-42 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 1e-42 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 2e-42 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 2e-41 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 2e-41 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 6e-41 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 8e-41 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 1e-40 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 4e-40 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 4e-40 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 7e-40 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 7e-40 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 4e-39 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 1e-38 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 2e-37 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 4e-36 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 3e-35 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 1e-34 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 8e-34 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 3e-30 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 1e-29 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 1e-29 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 2e-29 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 2e-29 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 5e-28 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 7e-28 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 1e-27 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 2e-27 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 3e-27 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 3e-27 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 3e-27 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 9e-27 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 1e-26 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 1e-26 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 2e-26 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 2e-26 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 2e-26 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 2e-26 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 2e-26 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 1e-25 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 6e-25 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 1e-24 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 2e-24 | |
| 3ewk_A | 227 | Sensor protein; PAS domain, alpha/beta fold, kinas | 3e-23 | |
| 3ewk_A | 227 | Sensor protein; PAS domain, alpha/beta fold, kinas | 5e-23 | |
| 3ewk_A | 227 | Sensor protein; PAS domain, alpha/beta fold, kinas | 4e-22 | |
| 3ewk_A | 227 | Sensor protein; PAS domain, alpha/beta fold, kinas | 3e-19 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 5e-23 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 1e-22 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 4e-22 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 5e-22 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 5e-22 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 9e-22 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 3e-21 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 7e-21 | |
| 2gj3_A | 120 | Nitrogen fixation regulatory protein; PAS domain, | 8e-21 | |
| 2gj3_A | 120 | Nitrogen fixation regulatory protein; PAS domain, | 5e-16 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 1e-20 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 2e-20 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 6e-20 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 2e-19 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 2e-19 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 2e-19 | |
| 3lyx_A | 124 | Sensory BOX/ggdef domain protein; structural genom | 3e-19 | |
| 3lyx_A | 124 | Sensory BOX/ggdef domain protein; structural genom | 3e-17 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 7e-19 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 7e-18 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 2e-17 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 3e-17 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 3e-17 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 3e-17 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 3e-17 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 4e-17 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 5e-17 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 7e-17 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 8e-17 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 2e-16 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 3e-16 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 4e-16 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 4e-16 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 6e-16 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 9e-16 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 1e-15 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 1e-15 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 2e-15 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 2e-15 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 2e-15 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 2e-15 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 3e-15 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 3e-15 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 6e-15 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 6e-15 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 6e-15 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 9e-15 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 1e-14 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 1e-14 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 2e-14 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 3e-14 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 3e-14 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 3e-14 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 3e-14 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 5e-14 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 5e-14 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-14 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-07 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 1e-13 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 2e-13 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 2e-13 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 2e-13 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 2e-13 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 3e-13 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 3e-13 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 4e-13 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 4e-13 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 4e-13 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 5e-13 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 6e-13 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 6e-13 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 7e-13 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 8e-13 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 1e-12 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 2e-12 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 2e-12 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 3e-12 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 4e-12 | |
| 3mqq_A | 120 | Transcriptional regulator, LUXR family; PAS domain | 4e-12 | |
| 3mqq_A | 120 | Transcriptional regulator, LUXR family; PAS domain | 6e-10 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 5e-12 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 6e-12 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 7e-12 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 1e-11 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 2e-11 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 2e-11 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 3e-11 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 6e-11 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 8e-11 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 9e-11 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 2e-10 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 8e-10 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 9e-10 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 1e-09 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 2e-09 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 2e-09 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 5e-09 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 6e-09 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 6e-09 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 9e-09 | |
| 3zzw_A | 289 | Tyrosine-protein kinase transmembrane receptor RO; | 1e-08 | |
| 3v5q_A | 297 | NT-3 growth factor receptor; kinase domain, kinase | 2e-08 | |
| 3luq_A | 114 | Sensor protein; PAS, histidine, kinase, PSI, MCSG, | 5e-08 | |
| 3luq_A | 114 | Sensor protein; PAS, histidine, kinase, PSI, MCSG, | 7e-05 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 5e-08 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 6e-08 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 7e-08 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 7e-08 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 9e-08 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 1e-07 | |
| 3b33_A | 115 | Sensor protein; structural genomics, PAS domain, n | 1e-07 | |
| 3b33_A | 115 | Sensor protein; structural genomics, PAS domain, n | 4e-05 | |
| 2r78_A | 117 | Sensor protein; sensory box sensor histidine kinas | 1e-07 | |
| 2r78_A | 117 | Sensor protein; sensory box sensor histidine kinas | 3e-07 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 1e-07 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 2e-07 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 2e-07 | |
| 2vlg_A | 111 | Sporulation kinase A; histidine kinase, two-compon | 5e-07 | |
| 2vlg_A | 111 | Sporulation kinase A; histidine kinase, two-compon | 3e-04 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 5e-07 | |
| 3bwl_A | 126 | Sensor protein; structural genomics, APC87707.1, P | 5e-07 | |
| 3bwl_A | 126 | Sensor protein; structural genomics, APC87707.1, P | 6e-07 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 7e-07 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 7e-07 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 1e-06 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 1e-06 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 1e-06 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 2e-06 | |
| 3mjq_A | 126 | Uncharacterized protein; NESG, structural genomics | 4e-06 | |
| 3mjq_A | 126 | Uncharacterized protein; NESG, structural genomics | 2e-05 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 1e-05 | |
| 3olo_A | 118 | Two-component sensor histidine kinase; structural | 1e-05 | |
| 3olo_A | 118 | Two-component sensor histidine kinase; structural | 3e-05 | |
| 3fc7_A | 125 | HTR-like protein, sensor protein; APC87712.1, HTR- | 2e-05 | |
| 3fc7_A | 125 | HTR-like protein, sensor protein; APC87712.1, HTR- | 3e-04 | |
| 3eeh_A | 125 | Putative light and redox sensing histidine kinase; | 3e-05 | |
| 3icy_A | 118 | Sensor protein; sensory box histidine kinase/respo | 3e-05 | |
| 3icy_A | 118 | Sensor protein; sensory box histidine kinase/respo | 2e-04 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 3e-05 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 4e-05 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 8e-05 | |
| 3kx0_X | 185 | Uncharacterized protein RV1364C/MT1410; PAS domain | 7e-04 |
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 318 bits (816), Expect = e-101
Identities = 92/315 (29%), Positives = 139/315 (44%), Gaps = 58/315 (18%)
Query: 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK----------- 712
+ + F+ K LG G +V L + + +A+K ++K ++ NK
Sbjct: 25 RKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 84
Query: 713 ----------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVA 756
+ Y GEL + + E RFY AE+V A
Sbjct: 85 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSA 142
Query: 757 LEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQ 816
LEYLH +GII+RDLKPEN+LL + H+ +TDF K +L +++ R
Sbjct: 143 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGT-----AK---VLSPESKQAR------ 188
Query: 817 NPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 876
+NSFVGT +Y++PE++ + D WALG ++Y+++ G PFR
Sbjct: 189 -----------ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
Query: 877 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS--HEGANEIKKHPFFKGV 934
F I+ + FP A+ L+ +LL D RLG EG +K HPFF+ V
Sbjct: 238 YLIFQKIIKLEYDFPEK--FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295
Query: 935 NWALVRCMNPPELDA 949
W + PP+L A
Sbjct: 296 TWENLHQQTPPKLTA 310
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327 | Back alignment and structure |
|---|
Score = 307 bits (790), Expect = 5e-97
Identities = 112/323 (34%), Positives = 159/323 (49%), Gaps = 65/323 (20%)
Query: 657 QKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNK- 712
+ E+I + F ++ LG G G V V +G+ FAMK + K +++ K
Sbjct: 5 TSVNRGPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKD 64
Query: 713 ---------------------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDA 745
T + LI +Y GGELF+ L+R+ + ED
Sbjct: 65 TAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE--GIFMEDT 122
Query: 746 VRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 805
FY AE+ +AL +LH +GIIYRDLKPEN++L GHV LTDF L CK
Sbjct: 123 ACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGL-----CK-------- 169
Query: 806 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 865
+ + ++F GT EY+APEI+ +GH AVDWW+LG L+Y+ML
Sbjct: 170 -------------ESIHDGTVT-HTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDML 215
Query: 866 YGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANE 924
G PF G+ R+KT IL L P + A+ L+ +LL R+ SRLG+ A E
Sbjct: 216 TGAPPFTGENRKKTIDKILKCKLNLPPY--LTQEARDLLKKLLKRNAASRLGAGPGDAGE 273
Query: 925 IKKHPFFKGVNWALV--RCMNPP 945
++ HPFF+ +NW + R + PP
Sbjct: 274 VQAHPFFRHINWEELLARKVEPP 296
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373 | Back alignment and structure |
|---|
Score = 309 bits (793), Expect = 7e-97
Identities = 103/329 (31%), Positives = 147/329 (44%), Gaps = 61/329 (18%)
Query: 647 RKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV 706
P + I S F +K +G G G V L ++A+K + K
Sbjct: 16 APPPAPSQQINLGPSSNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKA 75
Query: 707 MLNRN----------------------------KTKTHVCLITDYCPGGELFLLLDRQPT 738
+L + +T + + DY GGELF L R+
Sbjct: 76 ILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE-- 133
Query: 739 KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798
+ E RFYAAE+ AL YLH I+YRDLKPEN+LL GH+ LTDF L CK
Sbjct: 134 RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGL-----CKE 188
Query: 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALG 858
+ +T +++F GT EY+APE++ + VDWW LG
Sbjct: 189 NIEHNST----------------------TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLG 226
Query: 859 ILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS 918
+LYEMLYG PF + + + NIL+K L+ + + A+ L+ LL +D RLG+
Sbjct: 227 AVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPN--ITNSARHLLEGLLQKDRTKRLGA 284
Query: 919 HEGANEIKKHPFFKGVNWALV--RCMNPP 945
+ EIK H FF +NW + + + PP
Sbjct: 285 KDDFMEIKSHVFFSLINWDDLINKKITPP 313
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 306 bits (787), Expect = 1e-96
Identities = 107/321 (33%), Positives = 159/321 (49%), Gaps = 63/321 (19%)
Query: 657 QKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNK- 712
+ + E+ + F +K LG G G V LV+ + Q +AMK + K + R++
Sbjct: 12 HHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV 71
Query: 713 -------------------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVR 747
T+ + LI D+ GG+LF L ++ + E+ V+
Sbjct: 72 RTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVK 129
Query: 748 FYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 807
FY AE+ +AL++LH GIIYRDLKPEN+LL GH+ LTDF L K +
Sbjct: 130 FYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGL-----SKESIDHEKK-- 182
Query: 808 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYG 867
+ SF GT EY+APE++ GHT + DWW+ G+L++EML G
Sbjct: 183 --------------------AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
Query: 868 YTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIK 926
PF+GK R++T IL L P S A+ L+ L R+P +RLG+ +G EIK
Sbjct: 223 TLPFQGKDRKETMTMILKAKLGMPQF--LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIK 280
Query: 927 KHPFFKGVNWALV--RCMNPP 945
+H FF ++W + R ++PP
Sbjct: 281 RHSFFSTIDWNKLYRREIHPP 301
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318 | Back alignment and structure |
|---|
Score = 304 bits (781), Expect = 8e-96
Identities = 111/349 (31%), Positives = 166/349 (47%), Gaps = 73/349 (20%)
Query: 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN------------- 711
+ +LQ F+ ++ LG+G G VHL+ +G+Y+AMK + K +++
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 712 --------------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVAL 757
+ + +I DY GGELF LL + + +FYAAEV +AL
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLAL 119
Query: 758 EYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQN 817
EYLH + IIYRDLKPEN+LL NGH+ +TDF K
Sbjct: 120 EYLHSKDIIYRDLKPENILLDKNGHIKITDFGF-----AK-------------------- 154
Query: 818 PVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877
+ + GT +YIAPE+++ + ++DWW+ GIL+YEML GYTPF
Sbjct: 155 -----YVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM 209
Query: 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNW 936
KT+ IL+ +L+FP + K L+ RL+ RD RLG+ G ++K HP+FK V W
Sbjct: 210 KTYEKILNAELRFPPF--FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVW 267
Query: 937 ALV--RCMNPP--------ELDAPLFATDTEKEYKVVDPGMQDLQQNVF 975
+ R + P + D F E++ G +D ++F
Sbjct: 268 EKLLSRNIETPYEPPIQQGQGDTSQFDKYPEEDINYGVQG-EDPYADLF 315
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 303 bits (779), Expect = 3e-95
Identities = 103/311 (33%), Positives = 157/311 (50%), Gaps = 61/311 (19%)
Query: 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK------------ 712
++ + F +K LG G G V LV +G+Y+AMK + K V++ +++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 713 ---------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVAL 757
T +C + +Y GGELF L R+ +V E+ RFY AE+V AL
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSAL 118
Query: 758 EYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQN 817
EYLH + ++YRD+K EN++L +GH+ +TDF L CK +
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL-----CKEGI----------------- 156
Query: 818 PVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877
+F GT EY+APE++ + AVDWW LG+++YEM+ G PF + +
Sbjct: 157 -----SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
Query: 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNW 936
+ F IL ++++FP + S AK L+ LL +DPK RLG A E+ +H FF +NW
Sbjct: 212 RLFELILMEEIRFPRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
Query: 937 ALV--RCMNPP 945
V + + PP
Sbjct: 270 QDVVQKKLLPP 280
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353 | Back alignment and structure |
|---|
Score = 303 bits (779), Expect = 4e-95
Identities = 93/315 (29%), Positives = 146/315 (46%), Gaps = 62/315 (19%)
Query: 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK--------- 712
+ +++ L F + LG G G V L E G+ + +A+K + K V++ +
Sbjct: 13 NRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKR 72
Query: 713 -------------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEV 753
T + + +Y GG+L + + KE FYAAE+
Sbjct: 73 VLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEI 130
Query: 754 VVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 813
+ L +L +GIIYRDLK +NV+L GH+ + DF + CK + T
Sbjct: 131 AIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGM-----CKENIWDGVT-------- 177
Query: 814 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 873
+ +F GT +YIAPEIIA + +VDWWA G+LLYEML G PF G
Sbjct: 178 --------------TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 223
Query: 874 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFK 932
+ + F +I+ ++ +P S S A + L+ + P RLG G +IK+H FF+
Sbjct: 224 EDEDELFQSIMEHNVAYPKS--MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFR 281
Query: 933 GVNWALV--RCMNPP 945
++W + + + PP
Sbjct: 282 YIDWEKLERKEIQPP 296
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410 | Back alignment and structure |
|---|
Score = 304 bits (780), Expect = 1e-94
Identities = 100/356 (28%), Positives = 154/356 (43%), Gaps = 76/356 (21%)
Query: 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN------------- 711
++ + + +K +G G G V LV + + +AMK + K M+ R+
Sbjct: 65 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 124
Query: 712 --------------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVAL 757
+ ++ ++ +Y PGG+L L+ + E RFY AEVV+AL
Sbjct: 125 FANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAEVVLAL 181
Query: 758 EYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQN 817
+ +H G I+RD+KP+N+LL +GH+ L DF K +G
Sbjct: 182 DAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC----------------MKMNKEGMVR 225
Query: 818 PVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGILLYEMLYGYTPFRG 873
++ VGT +YI+PE++ G + DWW++G+ LYEML G TPF
Sbjct: 226 ----------CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 275
Query: 874 KTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
+ T++ I++ L FP S AK L+ L D + RLG + G EIK+H FF
Sbjct: 276 DSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFL-TDREVRLGRN-GVEEIKRHLFF 333
Query: 932 KGVNWA--LVRCMNPP-------ELDAPLF---ATDTEKEYKVVDPGMQDLQQNVF 975
K WA +R P ++D F D +E P Q F
Sbjct: 334 KNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDKGEEETFPIPKAFVGNQLPF 389
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 302 bits (776), Expect = 7e-94
Identities = 94/318 (29%), Positives = 145/318 (45%), Gaps = 66/318 (20%)
Query: 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN------------- 711
++ F +K +G G V +V++ +GQ +AMK M+K ML R
Sbjct: 57 RLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLV 116
Query: 712 --------------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVAL 757
+ + ++ L+ +Y GG+L LL + + + + RFY AE+V+A+
Sbjct: 117 NGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGER-IPAEMARFYLAEIVMAI 175
Query: 758 EYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQN 817
+ +H G ++RD+KP+N+LL GH+ L DF K R G
Sbjct: 176 DSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSC----------------LKLRADGTVR 219
Query: 818 PVFMAEPMRASNSFVGTEEYIAPEIIAGAG-------HTSAVDWWALGILLYEMLYGYTP 870
S VGT +Y++PEI+ G + DWWALG+ YEM YG TP
Sbjct: 220 ----------SLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
Query: 871 FRGKTRQKTFANILHKD--LKFPSSTPT-SLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927
F + +T+ I+H L P A+ + RLL P++RLG GA + +
Sbjct: 270 FYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLL-CPPETRLGRG-GAGDFRT 327
Query: 928 HPFFKGVNWALVRCMNPP 945
HPFF G++W +R PP
Sbjct: 328 HPFFFGLDWDGLRDSVPP 345
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345 | Back alignment and structure |
|---|
Score = 299 bits (769), Expect = 1e-93
Identities = 94/314 (29%), Positives = 152/314 (48%), Gaps = 64/314 (20%)
Query: 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK--------- 712
++ ++ F K LG G G V L E + Q+FA+KA+ K V+L +
Sbjct: 10 LQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKR 69
Query: 713 -------------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEV 753
TK ++ + +Y GG+L + FYAAE+
Sbjct: 70 VLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEI 127
Query: 754 VVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 813
++ L++LH +GI+YRDLK +N+LL +GH+ + DF + CK +L
Sbjct: 128 ILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGM-----CKENMLGDAK-------- 174
Query: 814 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 873
+N+F GT +YIAPEI+ G + +VDWW+ G+LLYEML G +PF G
Sbjct: 175 --------------TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG 220
Query: 874 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933
+ ++ F +I + +P AK L+ +L R+P+ RLG +I++HP F+
Sbjct: 221 QDEEELFHSIRMDNPFYPRW--LEKEAKDLLVKLFVREPEKRLGVRG---DIRQHPLFRE 275
Query: 934 VNWALV--RCMNPP 945
+NW + + ++PP
Sbjct: 276 INWEELERKEIDPP 289
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 299 bits (769), Expect = 1e-93
Identities = 97/316 (30%), Positives = 149/316 (47%), Gaps = 63/316 (19%)
Query: 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK--------- 712
S ++ + +F I+ LG G G V L + +G +A+K + K V+L +
Sbjct: 16 SSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKR 75
Query: 713 -------------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEV 753
T + + ++ GG+L + + + E RFYAAE+
Sbjct: 76 ILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEI 133
Query: 754 VVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 813
+ AL +LH +GIIYRDLK +NVLL GH L DF + CK + T
Sbjct: 134 ISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGM-----CKEGICNGVT-------- 180
Query: 814 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 873
+ +F GT +YIAPEI+ + AVDWWA+G+LLYEML G+ PF
Sbjct: 181 --------------TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA 226
Query: 874 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE--GANEIKKHPFF 931
+ F IL+ ++ +P+ A ++ + ++P RLGS G + I +HPFF
Sbjct: 227 ENEDDLFEAILNDEVVYPTW--LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFF 284
Query: 932 KGVNWALV--RCMNPP 945
K ++WA + R + PP
Sbjct: 285 KEIDWAQLNHRQIEPP 300
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 298 bits (766), Expect = 4e-93
Identities = 112/325 (34%), Positives = 162/325 (49%), Gaps = 71/325 (21%)
Query: 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNK------ 712
E++ +++F +K LG+G G V LV +G+ +AMK + K ++ + K
Sbjct: 47 HAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTR 106
Query: 713 -----------------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFY 749
T+T + LI DY GGELF L ++ + E V+ Y
Sbjct: 107 TERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIY 164
Query: 750 AAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 809
E+V+ALE+LH GIIYRD+K EN+LL NGHV LTDF L K
Sbjct: 165 VGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGL-----SK------------ 207
Query: 810 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLYG 867
F+A+ + F GT EY+AP+I+ G GH AVDWW+LG+L+YE+L G
Sbjct: 208 ---------EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
Query: 868 YTPF----RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGA 922
+PF ++ + IL + +P S AK L+ RLL +DPK RLG A
Sbjct: 259 ASPFTVDGEKNSQAEISRRILKSEPPYPQE--MSALAKDLIQRLLMKDPKKRLGCGPRDA 316
Query: 923 NEIKKHPFFKGVNWALV--RCMNPP 945
+EIK+H FF+ +NW + + + P
Sbjct: 317 DEIKEHLFFQKINWDDLAAKKVPAP 341
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 300 bits (770), Expect = 9e-93
Identities = 95/317 (29%), Positives = 152/317 (47%), Gaps = 64/317 (20%)
Query: 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN------------ 711
+++ + F +K +G G G V +V+L + + FAMK ++K ML R
Sbjct: 69 MRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVL 128
Query: 712 ---------------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVA 756
+ ++ L+ DY GG+L LL + + L E+ RFY AE+V+A
Sbjct: 129 VNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR-LPEEMARFYLAEMVIA 187
Query: 757 LEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQ 816
++ +H ++RD+KP+N+L+ NGH+ L DF C
Sbjct: 188 IDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGS-----CLK------------------ 224
Query: 817 NPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPF 871
M + S+ VGT +YI+PEI+ + DWW+LG+ +YEMLYG TPF
Sbjct: 225 ---LMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
Query: 872 RGKTRQKTFANILHK--DLKFPSSTPT-SLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928
++ +T+ I++ +FP+ S +AK L+ RL+ RLG + G + KKH
Sbjct: 282 YAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREH-RLGQN-GIEDFKKH 339
Query: 929 PFFKGVNWALVRCMNPP 945
PFF G++W +R P
Sbjct: 340 PFFSGIDWDNIRNCEAP 356
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350 | Back alignment and structure |
|---|
Score = 295 bits (758), Expect = 3e-92
Identities = 104/351 (29%), Positives = 149/351 (42%), Gaps = 74/351 (21%)
Query: 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN---------- 711
S L F IK LG+G G V LV+ SG ++AMK +DK ++
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 712 -----------------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVV 754
K +++ ++ +Y GGE+F L R E RFYAA++V
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIV 151
Query: 755 VALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKG 814
+ EYLH +IYRDLKPEN+L+ G++ +TDF K
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF-----AK----------------- 189
Query: 815 QQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 874
+ + GT E +APEII G+ AVDWWALG+L+YEM GY PF
Sbjct: 190 --------RVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Query: 875 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKG 933
+ + I+ ++FPS S K L+ LL D R G+ G N+IK H +F
Sbjct: 242 QPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299
Query: 934 VNWALV--RCMNPP-------ELDAPLFATDTEKEYKVVDPGMQDLQQNVF 975
+W + R + P D F E+E + + + F
Sbjct: 300 TDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE---IRVSINEKCGKEF 347
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 293 bits (752), Expect = 3e-91
Identities = 103/325 (31%), Positives = 159/325 (48%), Gaps = 72/325 (22%)
Query: 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK--------- 712
+ + + LQ F ++ +G G V LV L + + +AMK + K ++ +
Sbjct: 2 AMDPLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKH 61
Query: 713 -------------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEV 753
T++ + + +Y GG+L + RQ + L E+ RFY+AE+
Sbjct: 62 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEI 119
Query: 754 VVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 813
+AL YLH +GIIYRDLK +NVLL GH+ LTD+ + CK L
Sbjct: 120 SLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM-----CKEGL------------- 161
Query: 814 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF-- 871
P +++F GT YIAPEI+ G + +VDWWALG+L++EM+ G +PF
Sbjct: 162 ---------RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212
Query: 872 -------RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE--GA 922
T F IL K ++ P S S+ A ++ L++DPK RLG H G
Sbjct: 213 VGSSDNPDQNTEDYLFQVILEKQIRIPRS--LSVKAASVLKSFLNKDPKERLGCHPQTGF 270
Query: 923 NEIKKHPFFKGVNWALV--RCMNPP 945
+I+ HPFF+ V+W ++ + + PP
Sbjct: 271 ADIQGHPFFRNVDWDMMEQKQVVPP 295
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674 | Back alignment and structure |
|---|
Score = 301 bits (772), Expect = 2e-90
Identities = 106/460 (23%), Positives = 185/460 (40%), Gaps = 71/460 (15%)
Query: 526 PETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLD 585
P K++ D +++ + S WN +++ + + + +
Sbjct: 189 PNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDW 248
Query: 586 GSEHLEPLRNSIPEATAEESEKLVKQTAENVNEAVKELPDANLTPED---------LWAN 636
S+ +E + V + +++ E + + PE +
Sbjct: 249 DLTSRNDFMGSLSFGISELQKAGVDGWFKLLSQEEGEYFNVPVPPEGSEGNEELRQKFER 308
Query: 637 HSKVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQY 696
K + + + + +++ L F + LG G G V L E G+ +
Sbjct: 309 AKIGQGTKAPEEKTANTISKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDEL 368
Query: 697 FAMKAMDKGVMLNRNK----------------------------TKTHVCLITDYCPGGE 728
+A+K + K V++ + T + + +Y GG+
Sbjct: 369 YAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGD 428
Query: 729 LFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 788
L + + KE FYAAE+ + L +L +GIIYRDLK +NV+L GH+ + DF
Sbjct: 429 LMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADF 486
Query: 789 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH 848
+ CK + T + +F GT +YIAPEIIA +
Sbjct: 487 GM-----CKENIWDGVT----------------------TKTFCGTPDYIAPEIIAYQPY 519
Query: 849 TSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLL 908
+VDWWA G+LLYEML G PF G+ + F +I+ ++ +P S S A + L+
Sbjct: 520 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS--MSKEAVAICKGLM 577
Query: 909 HRDPKSRLGSHE-GANEIKKHPFFKGVNWALV--RCMNPP 945
+ P RLG G +IK+H FF+ ++W + + + PP
Sbjct: 578 TKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPP 617
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 294 bits (754), Expect = 2e-90
Identities = 112/366 (30%), Positives = 171/366 (46%), Gaps = 63/366 (17%)
Query: 611 QTAENVNEAVKELPDANLTPEDLWANHSKVVHPKPHRKDSPPWKAIQKILDSGEQINLQH 670
+T E E + + A P +S + + ++ +
Sbjct: 91 ETPEEREEWTTAIQTVADGLKKQAAAEMDFRSGSP-SDNSGAEEMEVSLAKPKHRVTMNE 149
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN------------------- 711
F +K LG G G V LV+ +G+Y+AMK + K V++ ++
Sbjct: 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 209
Query: 712 --------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ 763
+T +C + +Y GGELF L R+ +V ED RFY AE+V AL+YLH +
Sbjct: 210 LTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSE 267
Query: 764 -GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 822
++YRDLK EN++L +GH+ +TDF L CK + T
Sbjct: 268 KNVVYRDLKLENLMLDKDGHIKITDFGL-----CKEGIKDGAT----------------- 305
Query: 823 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 882
+F GT EY+APE++ + AVDWW LG+++YEM+ G PF + +K F
Sbjct: 306 -----MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 360
Query: 883 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALV-- 939
IL ++++FP + AK L+ LL +DPK RLG A EI +H FF G+ W V
Sbjct: 361 ILMEEIRFPRT--LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYE 418
Query: 940 RCMNPP 945
+ ++PP
Sbjct: 419 KKLSPP 424
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396 | Back alignment and structure |
|---|
Score = 291 bits (746), Expect = 8e-90
Identities = 103/363 (28%), Positives = 164/363 (45%), Gaps = 72/363 (19%)
Query: 624 PDANLTPEDLWANHSKVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTG 683
+ N ++ ++ + + LQ F ++ +G G
Sbjct: 7 HHHHDYDIPTTENLYFQGAMGSGIEEEKEAMNTRESGKASSSLGLQDFDLLRVIGRGSYA 66
Query: 684 SVHLVELCGSGQYFAMKAMDKGVMLNRNK----------------------------TKT 715
V LV L + + +AM+ + K ++ + T++
Sbjct: 67 KVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES 126
Query: 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 775
+ + +Y GG+L + RQ + L E+ RFY+AE+ +AL YLH +GIIYRDLK +NV
Sbjct: 127 RLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNV 184
Query: 776 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTE 835
LL GH+ LTD+ + CK L P +++F GT
Sbjct: 185 LLDSEGHIKLTDYGM-----CKEGL----------------------RPGDTTSTFCGTP 217
Query: 836 EYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF---------RGKTRQKTFANILHK 886
YIAPEI+ G + +VDWWALG+L++EM+ G +PF T F IL K
Sbjct: 218 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK 277
Query: 887 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE--GANEIKKHPFFKGVNWALV--RCM 942
++ P S S+ A ++ L++DPK RLG H G +I+ HPFF+ V+W ++ + +
Sbjct: 278 QIRIPRS--LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQV 335
Query: 943 NPP 945
PP
Sbjct: 336 VPP 338
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 289 bits (743), Expect = 2e-89
Identities = 82/322 (25%), Positives = 144/322 (44%), Gaps = 70/322 (21%)
Query: 659 ILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN------- 711
+ D E +N HF ++ +G G G V +V+ + + +AMK M+K + RN
Sbjct: 5 VFDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK 64
Query: 712 --------------------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAA 751
+ + + ++ D GG+L L + KE+ V+ +
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQN--VHFKEETVKLFIC 122
Query: 752 EVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRR 811
E+V+AL+YL Q II+RD+KP+N+LL +GHV +TDF++
Sbjct: 123 ELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNI-----AA-------------- 163
Query: 812 HKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGY 868
M + GT+ Y+APE+ + GAG++ AVDWW+LG+ YE+L G
Sbjct: 164 ---------MLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214
Query: 869 TPFRGKT---RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 925
P+ ++ ++ + +PS+ S L+ +LL +P R +++
Sbjct: 215 RPYHIRSSTSSKEIVHTFETTVVTYPSA--WSQEMVSLLKKLLEPNPDQRFS---QLSDV 269
Query: 926 KKHPFFKGVNWALV--RCMNPP 945
+ P+ +NW V + + P
Sbjct: 270 QNFPYMNDINWDAVFQKRLIPG 291
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 290 bits (745), Expect = 8e-88
Identities = 89/422 (21%), Positives = 157/422 (37%), Gaps = 76/422 (18%)
Query: 595 NSIPEATAEESEKLVKQTAENVNEAVKELPDANLTPEDLWANHSKVVHPKPHRKDSPPWK 654
+ + V + + + + P L + + WK
Sbjct: 117 PQAQLFCSFLDAETVARARAGAGDGLFQ-PLLRAVLAHLGQAPFQEFLDSLYFLRFLQWK 175
Query: 655 AIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN--- 711
++ + + F + LG G G V ++ +G+ +A K ++K + R
Sbjct: 176 WLEA-----QPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQ 230
Query: 712 ------------------------KTKTHVCLITDYCPGGELF--LLLDRQPTKVLKEDA 745
+TKT +CL+ GG++ + + +E
Sbjct: 231 GAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPR 290
Query: 746 VRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 805
FY A++V LE+LH + IIYRDLKPENVLL +G+V ++D L+
Sbjct: 291 AIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVE------------ 338
Query: 806 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 865
A + + GT ++APE++ G + +VD++ALG+ LYEM+
Sbjct: 339 --------------LKAGQTKT-KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMI 383
Query: 866 YGYTPFRGK----TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE- 920
PFR + ++ +L + + +P S +K LL +DP+ RLG +
Sbjct: 384 AARGPFRARGEKVENKELKQRVLEQAVTYPDK--FSPASKDFCEALLQKDPEKRLGFRDG 441
Query: 921 GANEIKKHPFFKGVNW-ALVRCMNPPELDAPLFA------TDTEKEYKVVDPGMQDLQQN 973
+ ++ HP F+ ++W L M P D V +
Sbjct: 442 SCDGLRTHPLFRDISWRQLEAGMLTPPFVPDSRTVYAKNIQDVGAFSTVKGVAFEKADTE 501
Query: 974 VF 975
F
Sbjct: 502 FF 503
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 291 bits (746), Expect = 1e-87
Identities = 107/431 (24%), Positives = 172/431 (39%), Gaps = 85/431 (19%)
Query: 593 LRNSIPEATAEESEKLVKQTAENVNEAVKELPDANLTPEDLWANHSKV-VHPKPHRKDSP 651
+N + + ++ +Q N + +++ P +L E H + V P DS
Sbjct: 106 TQNFLSHTGPDLIPEVPRQLVTNCTQRLEQGPCKDLFQELTRLTHEYLSVAPFADYLDSI 165
Query: 652 ------PWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKG 705
WK +++ + + FR + LG G G V ++ +G+ +A K ++K
Sbjct: 166 YFNRFLQWKWLER-----QPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKK 220
Query: 706 VMLNRN---------------------------KTKTHVCLITDYCPGGELFLLLDRQPT 738
+ R +TK +CL+ GG+L +
Sbjct: 221 RIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQ 280
Query: 739 KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798
E FYAAE+ LE LH + I+YRDLKPEN+LL +GH+ ++D L
Sbjct: 281 AGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGL-----AVH 335
Query: 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALG 858
+ E VGT Y+APE++ +T + DWWALG
Sbjct: 336 ----------------------VPEGQTI-KGRVGTVGYMAPEVVKNERYTFSPDWWALG 372
Query: 859 ILLYEMLYGYTPFRGK----TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKS 914
LLYEM+ G +PF+ + R++ + ++ S A+ L +LL +DP
Sbjct: 373 CLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSER--FSPQARSLCSQLLCKDPAE 430
Query: 915 RLGSHE-GANEIKKHPFFKGVNW-ALVRCMNPP----------ELDAPLFATDTEKEYKV 962
RLG A E+K+HP FK +N+ L M P D + +
Sbjct: 431 RLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQFSTVKGVE 490
Query: 963 VDPGMQDLQQN 973
++P QD Q
Sbjct: 491 LEPTDQDFYQK 501
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 287 bits (736), Expect = 6e-85
Identities = 97/387 (25%), Positives = 167/387 (43%), Gaps = 74/387 (19%)
Query: 598 PEATAEESEKLVKQTAENVNEAVKELPDANLTP--EDLWANHSKVVHPKPHRKDSPPWKA 655
+ S+ ++ ++ + K++P P E++ N V K D
Sbjct: 118 LACSHPFSKSAIEHVQGHLVK--KQVPPDLFQPYIEEICQNLRGDVFQKFIESDKFTRFC 175
Query: 656 IQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK--- 712
K ++ + + F + +G G G V+ +G+ +AMK +DK + +
Sbjct: 176 QWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL 235
Query: 713 ---------------------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDA 745
T + I D GG+L L + V E
Sbjct: 236 ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEAD 293
Query: 746 VRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 805
+RFYAAE+++ LE++H + ++YRDLKP N+LL +GHV ++D L+
Sbjct: 294 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-------------- 339
Query: 806 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEM 864
K + ++ VGT Y+APE++ G + S+ DW++LG +L+++
Sbjct: 340 ---CDFSKKK------------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKL 384
Query: 865 LYGYTPFRG---KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-E 920
L G++PFR K + + L ++ P S S + L+ LL RD RLG
Sbjct: 385 LRGHSPFRQHKTKDKHEIDRMTLTMAVELPDS--FSPELRSLLEGLLQRDVNRRLGCLGR 442
Query: 921 GANEIKKHPFFKGVNWALV--RCMNPP 945
GA E+K+ PFF+ ++W +V + PP
Sbjct: 443 GAQEVKESPFFRSLDWQMVFLQKYPPP 469
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 237 bits (607), Expect = 2e-71
Identities = 82/306 (26%), Positives = 117/306 (38%), Gaps = 64/306 (20%)
Query: 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN------------- 711
Q L+ F +PLG G G+V+L S A+K + K +
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 712 --------------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVAL 757
T V LI +Y P G ++ L + E Y E+ AL
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANAL 122
Query: 758 EYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQN 817
Y H + +I+RD+KPEN+LL G + + DF S RR
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA------------PSSRRT----- 165
Query: 818 PVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877
GT +Y+ PE+I G H VD W+LG+L YE L G PF T Q
Sbjct: 166 ------------DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 213
Query: 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 937
+T+ I + FP + A+ L+ RLL +P R E+ +HP+ +
Sbjct: 214 ETYKRISRVEFTFPDF--VTEGARDLISRLLKHNPSQRPMLR----EVLEHPWITANSSK 267
Query: 938 LVRCMN 943
C N
Sbjct: 268 PSNCQN 273
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 235 bits (602), Expect = 8e-71
Identities = 74/295 (25%), Positives = 115/295 (38%), Gaps = 64/295 (21%)
Query: 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN------------- 711
+ + F +PLG G G+V+L + A+K + K +
Sbjct: 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 712 --------------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVAL 757
+ + L+ ++ P GEL+ L + E + E+ AL
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH--GRFDEQRSATFMEELADAL 127
Query: 758 EYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQN 817
Y H + +I+RD+KPEN+L+ G + + DF S RR
Sbjct: 128 HYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHA------------PSLRRR----- 170
Query: 818 PVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877
+ GT +Y+ PE+I G H VD W G+L YE L G PF +
Sbjct: 171 ------------TMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT 218
Query: 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
+T I++ DLKFP S +K L+ +LL P RL + +HP+ K
Sbjct: 219 ETHRRIVNVDLKFPPF--LSDGSKDLISKLLRYHPPQRL----PLKGVMEHPWVK 267
|
| >2wkq_A NPH1-1, RAS-related C3 botulinum toxin substrate 1; transferase, cell adhesion, nucleotide-binding, protein engineering, RAS superfamily LOV2; HET: GTP FMN; 1.60A {Avena sativa} PDB: 2wkr_A* 2wkp_A* Length = 332 | Back alignment and structure |
|---|
Score = 223 bits (569), Expect = 1e-65
Identities = 120/236 (50%), Positives = 150/236 (63%), Gaps = 15/236 (6%)
Query: 465 QKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ 524
LATTLERIEKNFVITDPRLPDNPIIFASDSFL+LTEYSREEILGRN RFLQ
Sbjct: 4 SHHHHHHGSLATTLERIEKNFVITDPRLPDNPIIFASDSFLQLTEYSREEILGRNARFLQ 63
Query: 525 GPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQL 584
GPETD ATVRKIR AIDNQT+VTVQLINYTKSGKKFWNLFHLQPMRDQKG+VQYFIGVQL
Sbjct: 64 GPETDRATVRKIRDAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQL 123
Query: 585 DGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEAVKELPDANLTPEDLWANHSKVVHPK 644
DG+EH+ +++ + + + A+ + + + D + L +++ P
Sbjct: 124 DGTEHVRDAAEREGVMLIKKTAENIDEAAKELIK-CVVVGDGAVGKTCLLISYTTNAFPG 182
Query: 645 PHRKDSPPW-KAIQKILDSGEQINLQ--------HFRPIKPLGSGDTGSVHLVELC 691
+ + ++ G+ +NL + ++PL T + +C
Sbjct: 183 EYI--PTVFDNYSANVMVDGKPVNLGLWDTAGLEDYDRLRPLSYPQT---DVFLIC 233
|
| >2wkq_A NPH1-1, RAS-related C3 botulinum toxin substrate 1; transferase, cell adhesion, nucleotide-binding, protein engineering, RAS superfamily LOV2; HET: GTP FMN; 1.60A {Avena sativa} PDB: 2wkr_A* 2wkp_A* Length = 332 | Back alignment and structure |
|---|
Score = 151 bits (382), Expect = 3e-40
Identities = 48/130 (36%), Positives = 76/130 (58%)
Query: 185 PRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAG 244
+ L ++ FV++D PD PI++AS F ++T Y+ +E++GRN RFLQG
Sbjct: 7 HHHHGSLATTLERIEKNFVITDPRLPDNPIIFASDSFLQLTEYSREEILGRNARFLQGPE 66
Query: 245 TDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304
TD V KIR+ + N +L+NY K G FWNL + P++D +G V FIG+Q++ +
Sbjct: 67 TDRATVRKIRDAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGT 126
Query: 305 KHTEGAKDKM 314
+H A ++
Sbjct: 127 EHVRDAAERE 136
|
| >2v0u_A NPH1-1, LOV2; kinase, transferase, ATP-binding, serine/threonine-protein kinase, light-induced signal trans phototropin1, nucleotide-binding; HET: FMN; 1.40A {Avena sativa} PDB: 2v0w_A* 2v1b_A* 2v1a_A* 1jnu_A* 1g28_A* Length = 146 | Back alignment and structure |
|---|
Score = 214 bits (546), Expect = 7e-65
Identities = 123/150 (82%), Positives = 133/150 (88%), Gaps = 7/150 (4%)
Query: 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATV 533
LATTLERIEKNFVITDPRLPDNPIIFASDSFL+LTEYSREEILGRNCRFLQGPETD ATV
Sbjct: 4 LATTLERIEKNFVITDPRLPDNPIIFASDSFLQLTEYSREEILGRNCRFLQGPETDRATV 63
Query: 534 RKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593
RKIR AIDNQT+VTVQLINYTKSGKKFWNLFHLQPMRDQKG+VQYFIGVQLDG+EH+
Sbjct: 64 RKIRDAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVR-- 121
Query: 594 RNSIPEATAEESEKLVKQTAENVNEAVKEL 623
+A E L+K+TAEN++EA KEL
Sbjct: 122 -----DAAEREGVMLIKKTAENIDEAAKEL 146
|
| >2v0u_A NPH1-1, LOV2; kinase, transferase, ATP-binding, serine/threonine-protein kinase, light-induced signal trans phototropin1, nucleotide-binding; HET: FMN; 1.40A {Avena sativa} PDB: 2v0w_A* 2v1b_A* 2v1a_A* 1jnu_A* 1g28_A* Length = 146 | Back alignment and structure |
|---|
Score = 183 bits (468), Expect = 3e-54
Identities = 53/154 (34%), Positives = 85/154 (55%), Gaps = 9/154 (5%)
Query: 189 DIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPE 248
+ + L ++ FV++D PD PI++AS F ++T Y+ +E++GRNCRFLQG TD
Sbjct: 2 EFLATTLERIEKNFVITDPRLPDNPIIFASDSFLQLTEYSREEILGRNCRFLQGPETDRA 61
Query: 249 DVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTE 308
V KIR+ + N +L+NY K G FWNL + P++D +G V FIG+Q++ ++H
Sbjct: 62 TVRKIRDAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVR 121
Query: 309 GAKDKMLRPNGLPESLIRYDARQKEMATSSVTEL 342
A ++ E ++ E + EL
Sbjct: 122 DAAER--------EGVMLIKKTA-ENIDEAAKEL 146
|
| >2z6d_A Phototropin-2; PAS-fold, LOV-fold, alternative splicing, ATP-binding, chromophore, flavoprotein, FMN, kinase, membrane, nucleotide-binding; HET: FMN; 2.00A {Arabidopsis thaliana} PDB: 2z6c_A* Length = 130 | Back alignment and structure |
|---|
Score = 206 bits (526), Expect = 2e-62
Identities = 97/130 (74%), Positives = 112/130 (86%)
Query: 184 LPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGA 243
PRVS +K ALST QQTFVVSDAT+P PI+YAS+GFF MTGY+SKE+VGRNCRFLQG
Sbjct: 1 FPRVSQELKTALSTLQQTFVVSDATQPHCPIVYASSGFFTMTGYSSKEIVGRNCRFLQGP 60
Query: 244 GTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEV 303
TD +VAKIR+ ++NG+SYCGRLLNYKKDGTPFWNLLT+ PIKDD+G +KFIGMQVEV
Sbjct: 61 DTDKNEVAKIRDCVKNGKSYCGRLLNYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQVEV 120
Query: 304 SKHTEGAKDK 313
SK+TEG DK
Sbjct: 121 SKYTEGVNDK 130
|
| >2z6d_A Phototropin-2; PAS-fold, LOV-fold, alternative splicing, ATP-binding, chromophore, flavoprotein, FMN, kinase, membrane, nucleotide-binding; HET: FMN; 2.00A {Arabidopsis thaliana} PDB: 2z6c_A* Length = 130 | Back alignment and structure |
|---|
Score = 190 bits (485), Expect = 1e-56
Identities = 53/127 (41%), Positives = 79/127 (62%)
Query: 469 RKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPET 528
R +L T L +++ FV++D P PI++AS F +T YS +EI+GRNCRFLQGP+T
Sbjct: 3 RVSQELKTALSTLQQTFVVSDATQPHCPIVYASSGFFTMTGYSSKEIVGRNCRFLQGPDT 62
Query: 529 DPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSE 588
D V KIR + N +L+NY K G FWNL + P++D +G FIG+Q++ S+
Sbjct: 63 DKNEVAKIRDCVKNGKSYCGRLLNYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQVEVSK 122
Query: 589 HLEPLRN 595
+ E + +
Sbjct: 123 YTEGVND 129
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 209 bits (534), Expect = 4e-61
Identities = 64/304 (21%), Positives = 111/304 (36%), Gaps = 59/304 (19%)
Query: 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDK----------------------- 704
F I LG G G V +Y+A+K +
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 705 -------------GVMLNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAA 751
+ K K+ + + +YC G L+ L+ + + D
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLN-QQRDEYWRLFR 123
Query: 752 EVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRR 811
+++ AL Y+H QGII+RDLKP N+ + + +V + DF L+ N +
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA-------------KNVHRSL 170
Query: 812 HKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTP 870
+ + + S +GT Y+A E++ G GH +D ++LGI+ +EM+Y
Sbjct: 171 DILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP--F 228
Query: 871 FRGKTRQKTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928
G R + ++FP K+++ L+ DP R GA +
Sbjct: 229 STGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRP----GARTLLNS 284
Query: 929 PFFK 932
+
Sbjct: 285 GWLP 288
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 209 bits (535), Expect = 1e-60
Identities = 69/378 (18%), Positives = 128/378 (33%), Gaps = 117/378 (30%)
Query: 631 EDLWANHSKVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVEL 690
+D+ +N+S +++ + K+ + + +R I+ L G + L E
Sbjct: 7 KDILSNYSNLIYLNKYVKE--------------KDKYINDYRIIRTLNQGKFNKIILCE- 51
Query: 691 CGSGQYFAMKAMDKGVMLNRNK-------------------------------------- 712
+++A+K +K ++ +
Sbjct: 52 -KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEG 110
Query: 713 ---TKTHVCLITDYCPGGELF------LLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ 763
V +I +Y + +LD+ T + ++ V+ + Y+H +
Sbjct: 111 IITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE 170
Query: 764 -GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 822
I +RD+KP N+L+ NG V L+DF S K+
Sbjct: 171 KNICHRDVKPSNILMDKNGRVKLSDFGESEYM------------VDKKIK---------- 208
Query: 823 EPMRASNSFVGTEEYIAPEIIAGAG--HTSAVDWWALGILLYEMLYGYTPFRGK-TRQKT 879
GT E++ PE + + + VD W+LGI LY M Y PF K + +
Sbjct: 209 -------GSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVEL 261
Query: 880 FANILHKDLKFPSSTPT-----------------SLHAKQLMYRLLHRDPKSRLGSHEGA 922
F NI K++++P S + L ++P R+ S
Sbjct: 262 FNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSE--- 318
Query: 923 NEIKKHPFFKGVNWALVR 940
+ KH + N +R
Sbjct: 319 -DALKHEWLADTNIEDLR 335
|
| >4eet_B Phototropin-2; LOV, blue light photoreceptor, signaling protein, flavoprote; HET: FMN; 1.20A {Arabidopsis thaliana} PDB: 4ees_A* 4eer_A* 4eep_A* 4eeu_A* 1jnu_A* 1g28_A* Length = 115 | Back alignment and structure |
|---|
Score = 197 bits (504), Expect = 1e-59
Identities = 96/113 (84%), Positives = 103/113 (91%)
Query: 478 LERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIR 537
E IEKNFVITDPRLPDNPIIFASD FLELTEYSREEILGRN RFLQGPETD ATV+KIR
Sbjct: 3 PEFIEKNFVITDPRLPDNPIIFASDGFLELTEYSREEILGRNARFLQGPETDQATVQKIR 62
Query: 538 AAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHL 590
AI +Q + TVQLINYTKSGKKFWNL HLQP+RDQKGE+QYFIGVQLDGS+H+
Sbjct: 63 DAIRDQRETTVQLINYTKSGKKFWNLLHLQPVRDQKGELQYFIGVQLDGSDHV 115
|
| >4eet_B Phototropin-2; LOV, blue light photoreceptor, signaling protein, flavoprote; HET: FMN; 1.20A {Arabidopsis thaliana} PDB: 4ees_A* 4eer_A* 4eep_A* 4eeu_A* 1jnu_A* 1g28_A* Length = 115 | Back alignment and structure |
|---|
Score = 184 bits (470), Expect = 8e-55
Identities = 47/113 (41%), Positives = 76/113 (67%)
Query: 194 ALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKI 253
+ ++ FV++D PD PI++AS GF ++T Y+ +E++GRN RFLQG TD V KI
Sbjct: 2 SPEFIEKNFVITDPRLPDNPIIFASDGFLELTEYSREEILGRNARFLQGPETDQATVQKI 61
Query: 254 RETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKH 306
R+ +++ + +L+NY K G FWNLL + P++D +G++ FIG+Q++ S H
Sbjct: 62 RDAIRDQRETTVQLINYTKSGKKFWNLLHLQPVRDQKGELQYFIGVQLDGSDH 114
|
| >3ue6_A Aureochrome1; PAS/LOV domain, FMN-binding blue-light photoreceptor, signal protein; HET: FMN; 2.75A {Vaucheria frigida} PDB: 3ulf_A* Length = 166 | Back alignment and structure |
|---|
Score = 198 bits (505), Expect = 5e-59
Identities = 67/155 (43%), Positives = 91/155 (58%), Gaps = 3/155 (1%)
Query: 440 EIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIF 499
+I + + ++ S +++ + L L+ ++NFVITD LPDNPI++
Sbjct: 6 SLIAQCSPEADTLLTDNPSKANRILEDPDYS---LVKALQMAQQNFVITDASLPDNPIVY 62
Query: 500 ASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKK 559
AS FL LT YS ++ILGRNCRFLQGPETDP V KIR AI D +V L+NY + G
Sbjct: 63 ASRGFLTLTGYSLDQILGRNCRFLQGPETDPRAVDKIRNAITKGVDTSVCLLNYRQDGTT 122
Query: 560 FWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLR 594
FWNLF + +RD KG + ++GVQ SE L
Sbjct: 123 FWNLFFVAGLRDSKGNIVNYVGVQSKVSEDYAKLL 157
|
| >3ue6_A Aureochrome1; PAS/LOV domain, FMN-binding blue-light photoreceptor, signal protein; HET: FMN; 2.75A {Vaucheria frigida} PDB: 3ulf_A* Length = 166 | Back alignment and structure |
|---|
Score = 185 bits (471), Expect = 3e-54
Identities = 56/143 (39%), Positives = 84/143 (58%)
Query: 166 NSVRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMT 225
+ + + + L + AL QQ FV++DA+ PD PI+YAS GF +T
Sbjct: 12 SPEADTLLTDNPSKANRILEDPDYSLVKALQMAQQNFVITDASLPDNPIVYASRGFLTLT 71
Query: 226 GYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAP 285
GY+ +++GRNCRFLQG TDP V KIR + G LLNY++DGT FWNL +A
Sbjct: 72 GYSLDQILGRNCRFLQGPETDPRAVDKIRNAITKGVDTSVCLLNYRQDGTTFWNLFFVAG 131
Query: 286 IKDDEGKVLKFIGMQVEVSKHTE 308
++D +G ++ ++G+Q +VS+
Sbjct: 132 LRDSKGNIVNYVGVQSKVSEDYA 154
|
| >1n9l_A PHOT-LOV1, putative blue light receptor; phototropin, flavin, electron transport; HET: FMN; 1.90A {Chlamydomonas reinhardtii} SCOP: d.110.3.6 PDB: 1n9n_A* 1n9o_A* Length = 109 | Back alignment and structure |
|---|
Score = 193 bits (493), Expect = 4e-58
Identities = 65/107 (60%), Positives = 86/107 (80%)
Query: 198 FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETL 257
+ TFVV+DAT PD P++YAS GF+ MTGY EV+G NCRFLQG GTDP++V KIR+ +
Sbjct: 2 LRHTFVVADATLPDCPLVYASEGFYAMTGYGPDEVLGHNCRFLQGEGTDPKEVQKIRDAI 61
Query: 258 QNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304
+ G++ RLLNY+KDGTPFWNLLT+ PIK +G+V KF+G+QV+V+
Sbjct: 62 KKGEACSVRLLNYRKDGTPFWNLLTVTPIKTPDGRVSKFVGVQVDVT 108
|
| >1n9l_A PHOT-LOV1, putative blue light receptor; phototropin, flavin, electron transport; HET: FMN; 1.90A {Chlamydomonas reinhardtii} SCOP: d.110.3.6 PDB: 1n9n_A* 1n9o_A* Length = 109 | Back alignment and structure |
|---|
Score = 186 bits (476), Expect = 9e-56
Identities = 49/102 (48%), Positives = 66/102 (64%)
Query: 484 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQ 543
FV+ D LPD P+++AS+ F +T Y +E+LG NCRFLQG TDP V+KIR AI
Sbjct: 5 TFVVADATLPDCPLVYASEGFYAMTGYGPDEVLGHNCRFLQGEGTDPKEVQKIRDAIKKG 64
Query: 544 TDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLD 585
+V+L+NY K G FWNL + P++ G V F+GVQ+D
Sbjct: 65 EACSVRLLNYRKDGTPFWNLLTVTPIKTPDGRVSKFVGVQVD 106
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 199 bits (509), Expect = 5e-58
Identities = 70/292 (23%), Positives = 113/292 (38%), Gaps = 61/292 (20%)
Query: 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN---------------- 711
++ F+ LG G V+ E +G A+K +DK M
Sbjct: 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 69
Query: 712 -----------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYL 760
+ +V L+ + C GE+ L + K E+ R + +++ + YL
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYL 128
Query: 761 HCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVF 820
H GI++RDL N+LL N ++ + DF L+ +
Sbjct: 129 HSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKH------------------- 169
Query: 821 MAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880
+ GT YI+PEI + H D W+LG + Y +L G PF T + T
Sbjct: 170 --------YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL 221
Query: 881 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
++ D + PS AK L+++LL R+P RL + + HPF
Sbjct: 222 NKVVLADYEMPSFLSIE--AKDLIHQLLRRNPADRL----SLSSVLDHPFMS 267
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 200 bits (510), Expect = 1e-57
Identities = 67/337 (19%), Positives = 115/337 (34%), Gaps = 70/337 (20%)
Query: 627 NLTPEDLWANHSKVVHPKPHRKDSPPWKAIQKIL---DSGEQINLQHFRPIKPLGSGDTG 683
+L E+L+ + P+ + +Q E Q F+ + LG G G
Sbjct: 12 DLGTENLYFQSMHQLQPRRVSFRGEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYG 71
Query: 684 SVHLVELCGSGQYFAMKAMDKGVMLNRNK---------------------------TKTH 716
V V G+ +A+K +++
Sbjct: 72 EVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGI 131
Query: 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 776
+ L T+ C G L + L E V Y + ++AL +LH QG+++ D+KP N+
Sbjct: 132 LYLQTELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIF 189
Query: 777 LQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEE 836
L G L DF L V + G
Sbjct: 190 LGPRGRCKLGDFGLL---------------------------VELGTAGAG-EVQEGDPR 221
Query: 837 YIAPEIIAGAGHTSAVDWWALGILLYEMLYGYT-PFRGKTRQKTFANILHKDLKFPSSTP 895
Y+APE++ G + +A D ++LG+ + E+ P G+ Q+ L +F +
Sbjct: 222 YMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLP--PEFTAG-- 276
Query: 896 TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
S + ++ +L DPK R A + P +
Sbjct: 277 LSSELRSVLVMMLEPDPKLRA----TAEALLALPVLR 309
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 197 bits (503), Expect = 2e-56
Identities = 72/331 (21%), Positives = 121/331 (36%), Gaps = 64/331 (19%)
Query: 629 TPEDLWANHSKVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLV 688
P D V +PP K I ++L + + + + LG G +
Sbjct: 3 APADPGKAGVPGVAAPGAPAAAPPAKEIPEVLVDPR--SRRRYVRGRFLGKGGFAKCFEI 60
Query: 689 ELCGSGQYFAMKAMDKGVMLNRN---------------------------KTKTHVCLIT 721
+ + FA K + K ++L + + V ++
Sbjct: 61 SDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 120
Query: 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 781
+ C L L R+ K L E R+Y ++V+ +YLH +I+RDLK N+ L +
Sbjct: 121 ELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL 178
Query: 782 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPE 841
V + DF L+ + GT YIAPE
Sbjct: 179 EVKIGDFGLATKVEYDGERK---------------------------KVLCGTPNYIAPE 211
Query: 842 IIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAK 901
+++ GH+ VD W++G ++Y +L G PF ++T+ I + P A
Sbjct: 212 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPV--AA 269
Query: 902 QLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
L+ ++L DP +R NE+ FF
Sbjct: 270 SLIQKMLQTDPTARP----TINELLNDEFFT 296
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 194 bits (496), Expect = 5e-56
Identities = 64/293 (21%), Positives = 110/293 (37%), Gaps = 62/293 (21%)
Query: 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN--------------- 711
+ + + + LG G + + + FA K + K ++L +
Sbjct: 13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL 72
Query: 712 ------------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEY 759
+ V ++ + C L L R+ K L E R+Y ++V+ +Y
Sbjct: 73 AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQY 130
Query: 760 LHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPV 819
LH +I+RDLK N+ L + V + DF L+ +
Sbjct: 131 LHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK--KV-------------- 174
Query: 820 FMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879
GT YIAPE+++ GH+ VD W++G ++Y +L G PF ++T
Sbjct: 175 -----------LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 223
Query: 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
+ I + P A L+ ++L DP +R NE+ FF
Sbjct: 224 YLRIKKNEYSIPKHINPV--AASLIQKMLQTDPTARP----TINELLNDEFFT 270
|
| >3p7n_A Sensor histidine kinase; LOV domain, light-activated transcription factor, DNA bindin; HET: FMN; 2.10A {Erythrobacter litoralis} Length = 258 | Back alignment and structure |
|---|
Score = 192 bits (490), Expect = 9e-56
Identities = 66/238 (27%), Positives = 101/238 (42%), Gaps = 21/238 (8%)
Query: 424 IGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEK 483
+GR DD D G D P + D +V + + + +E
Sbjct: 21 MGRDLYDDDDKDHP----FTMGQDRPIDGSGAPGADDTRVEVQPPAQ--WVLDLIEASPI 74
Query: 484 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQ 543
V++DPRL DNP+I + +F +LT YS EE +GRNCRFL G T+P KIR +
Sbjct: 75 ASVVSDPRLADNPLIAINQAFTDLTGYSEEECVGRNCRFLAGSGTEPWLTDKIRQGVREH 134
Query: 544 TDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAE 603
V V+++NY K G F N + P+ D E+ YF+G Q++ + +
Sbjct: 135 KPVLVEILNYKKDGTPFRNAVLVAPIYDDDDELLYFLGSQVEVDDDQPNM-----GMARR 189
Query: 604 ESEKLVKQTAENVNEAVKELPDANLTPEDLWAN----------HSKVVHPKPHRKDSP 651
E + +T V L + L +++ A H +V K + K S
Sbjct: 190 ERAAEMLKTLSPRQLEVTTLVASGLRNKEVAARLGLSEKTVKMHRGLVMEKLNLKTSA 247
|
| >3p7n_A Sensor histidine kinase; LOV domain, light-activated transcription factor, DNA bindin; HET: FMN; 2.10A {Erythrobacter litoralis} Length = 258 | Back alignment and structure |
|---|
Score = 188 bits (479), Expect = 3e-54
Identities = 62/203 (30%), Positives = 91/203 (44%), Gaps = 14/203 (6%)
Query: 144 VARTSGGDDPNGKPGTSRRNSNNSVRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFV 203
+ R DD P T ++ + D + + V D + V
Sbjct: 21 MGRDLYDDDDKDHPFTMGQDRPIDGSGAPGADDT---RVEVQPPAQWVLDLIEASPIASV 77
Query: 204 VSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSY 263
VSD D P++ + F +TGY+ +E VGRNCRFL G+GT+P KIR+ ++ +
Sbjct: 78 VSDPRLADNPLIAINQAFTDLTGYSEEECVGRNCRFLAGSGTEPWLTDKIRQGVREHKPV 137
Query: 264 CGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLP-- 321
+LNYKKDGTPF N + +API DD+ ++L F+G QVEV
Sbjct: 138 LVEILNYKKDGTPFRNAVLVAPIYDDDDELLYFLGSQVEVDDDQPNMGMARRERAAEMLK 197
Query: 322 ---------ESLIRYDARQKEMA 335
+L+ R KE+A
Sbjct: 198 TLSPRQLEVTTLVASGLRNKEVA 220
|
| >3t50_A Blue-light-activated histidine kinase; PAS superfamily, blue-light photoreceptor, FMN binding, TRAN; HET: FMN; 1.64A {Brucella melitensis} Length = 128 | Back alignment and structure |
|---|
Score = 186 bits (474), Expect = 3e-55
Identities = 54/114 (47%), Positives = 77/114 (67%)
Query: 478 LERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIR 537
E +IT+P LPDNPI+FA+ +FL+LT Y +E++GRNCRFLQG TDPA VR I+
Sbjct: 3 SEFTLMPMLITNPHLPDNPIVFANPAFLKLTGYEADEVMGRNCRFLQGHGTDPAHVRAIK 62
Query: 538 AAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591
+AI + + + +INY KSG+ FWN H+ P+ + G +Q+F+ QLD + L
Sbjct: 63 SAIAAEKPIDIDIINYKKSGEAFWNRLHISPVHNANGRLQHFVSSQLDVTLELV 116
|
| >3t50_A Blue-light-activated histidine kinase; PAS superfamily, blue-light photoreceptor, FMN binding, TRAN; HET: FMN; 1.64A {Brucella melitensis} Length = 128 | Back alignment and structure |
|---|
Score = 179 bits (457), Expect = 8e-53
Identities = 43/113 (38%), Positives = 67/113 (59%)
Query: 194 ALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKI 253
A ++++ PD PI++A+ F K+TGY + EV+GRNCRFLQG GTDP V I
Sbjct: 2 ASEFTLMPMLITNPHLPDNPIVFANPAFLKLTGYEADEVMGRNCRFLQGHGTDPAHVRAI 61
Query: 254 RETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKH 306
+ + + ++NYKK G FWN L I+P+ + G++ F+ Q++V+
Sbjct: 62 KSAIAAEKPIDIDIINYKKSGEAFWNRLHISPVHNANGRLQHFVSSQLDVTLE 114
|
| >2l0w_A Potassium voltage-gated channel, subfamily H (EAG member 2, isoform CRA_B; HERG, PAS domain, voltage-gated potassium channel, membrane; NMR {Homo sapiens} PDB: 2l1m_A 2l4r_A Length = 138 | Back alignment and structure |
|---|
Score = 185 bits (473), Expect = 5e-55
Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 5/130 (3%)
Query: 464 RQKEMRKGIDLATTLERIEK---NFVITDPRLPDNPIIFASDSFLELTEYSREEILGR-- 518
R + L T + + E F+I + R+ + +I+ +D F EL YSR E++ R
Sbjct: 8 RGHVAPQNTFLDTIIRKFEGQSRKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPC 67
Query: 519 NCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQY 578
C FL GP T +I A+ + V++ Y K G F L + P++++ G V
Sbjct: 68 TCDFLHGPRTQRRAAAQIAQALLGAEERKVEIAFYRKDGSCFLCLVDVVPVKNEDGAVIM 127
Query: 579 FIGVQLDGSE 588
FI E
Sbjct: 128 FILNFEVVME 137
|
| >2l0w_A Potassium voltage-gated channel, subfamily H (EAG member 2, isoform CRA_B; HERG, PAS domain, voltage-gated potassium channel, membrane; NMR {Homo sapiens} PDB: 2l1m_A 2l4r_A Length = 138 | Back alignment and structure |
|---|
Score = 178 bits (454), Expect = 2e-52
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Query: 189 DIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGR--NCRFLQGAGTD 246
D + + F++++A + ++Y + GF ++ GY+ EV+ R C FL G T
Sbjct: 19 DTIIRKFEGQSRKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPRTQ 78
Query: 247 PEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304
A+I + L + + Y+KDG+ F L+ + P+K+++G V+ FI V
Sbjct: 79 RRAAAQIAQALLGAEERKVEIAFYRKDGSCFLCLVDVVPVKNEDGAVIMFILNFEVVM 136
|
| >3sw1_A Sensory box protein; light-oxygen-voltage, LOV, PAS, signaling protein; HET: FMN; 2.63A {Pseudomonas putida} Length = 162 | Back alignment and structure |
|---|
Score = 182 bits (464), Expect = 2e-53
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 3/135 (2%)
Query: 457 DSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEIL 516
V + L + ++ V+ + D +I+ + +F LT YSR+EIL
Sbjct: 13 GLVPRGSHMINAQL---LQSMVDASNDGIVVAEKEGDDTILIYVNAAFEYLTGYSRDEIL 69
Query: 517 GRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEV 576
++CRFLQG + D +IR A+ L NY K G FWN + P++ +
Sbjct: 70 YQDCRFLQGDDRDQLGRARIRKAMAEGRPCREVLRNYRKDGSAFWNELSITPVKSDFDQR 129
Query: 577 QYFIGVQLDGSEHLE 591
YFIG+Q D S +E
Sbjct: 130 TYFIGIQKDVSRQVE 144
|
| >3sw1_A Sensory box protein; light-oxygen-voltage, LOV, PAS, signaling protein; HET: FMN; 2.63A {Pseudomonas putida} Length = 162 | Back alignment and structure |
|---|
Score = 182 bits (464), Expect = 2e-53
Identities = 42/115 (36%), Positives = 66/115 (57%)
Query: 194 ALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKI 253
+ VV++ D ++Y +A F +TGY+ E++ ++CRFLQG D A+I
Sbjct: 30 MVDASNDGIVVAEKEGDDTILIYVNAAFEYLTGYSRDEILYQDCRFLQGDDRDQLGRARI 89
Query: 254 RETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTE 308
R+ + G+ L NY+KDG+ FWN L+I P+K D + FIG+Q +VS+ E
Sbjct: 90 RKAMAEGRPCREVLRNYRKDGSAFWNELSITPVKSDFDQRTYFIGIQKDVSRQVE 144
|
| >1byw_A Protein (human ERG potassium channel); PAS domain, potassium channel domain, membrane protein; 2.60A {Homo sapiens} SCOP: d.110.3.6 Length = 110 | Back alignment and structure |
|---|
Score = 180 bits (459), Expect = 2e-53
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 484 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGR--NCRFLQGPETDPATVRKIRAAID 541
F+I + R+ + +I+ +D F EL YSR E++ R C FL GP T +I A+
Sbjct: 3 KFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPCTQRRAAAQIAQALL 62
Query: 542 NQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSE 588
+ V++ Y K G F L + P++++ G V FI E
Sbjct: 63 GAEERKVEIAFYRKDGSCFLCLVDVVPVKNEDGAVIMFILNFEVVME 109
|
| >1byw_A Protein (human ERG potassium channel); PAS domain, potassium channel domain, membrane protein; 2.60A {Homo sapiens} SCOP: d.110.3.6 Length = 110 | Back alignment and structure |
|---|
Score = 178 bits (453), Expect = 1e-52
Identities = 31/107 (28%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 200 QTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGR--NCRFLQGAGTDPEDVAKIRETL 257
+ F++++A + ++Y + GF ++ GY+ EV+ R C FL G T A+I + L
Sbjct: 2 RKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPCTQRRAAAQIAQAL 61
Query: 258 QNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304
+ + Y+KDG+ F L+ + P+K+++G V+ FI V
Sbjct: 62 LGAEERKVEIAFYRKDGSCFLCLVDVVPVKNEDGAVIMFILNFEVVM 108
|
| >2pr5_A Blue-light photoreceptor; light-oxygen-voltage, LOV, PER-ARNT-SIM, PAS, flavoprotein, protein; HET: FMN; 1.45A {Bacillus subtilis} PDB: 2pr6_A* Length = 132 | Back alignment and structure |
|---|
Score = 180 bits (459), Expect = 4e-53
Identities = 58/128 (45%), Positives = 80/128 (62%), Gaps = 5/128 (3%)
Query: 478 LERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIR 537
L+ + VITDP L DNPI++ + F+++T Y EEILG+NCRFLQG TDPA V IR
Sbjct: 5 LDHVRVGVVITDPALEDNPIVYVNQGFVQMTGYETEEILGKNCRFLQGKHTDPAEVDNIR 64
Query: 538 AAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHL---EPLR 594
A+ N+ VTVQ+ NY K G FWN ++ PM + YF+G+Q D ++ + L
Sbjct: 65 TALQNKEPVTVQIQNYKKDGTMFWNELNIDPMEI--EDKTYFVGIQNDITKQKEYEKLLE 122
Query: 595 NSIPEATA 602
+S+ E TA
Sbjct: 123 DSLTEITA 130
|
| >2pr5_A Blue-light photoreceptor; light-oxygen-voltage, LOV, PER-ARNT-SIM, PAS, flavoprotein, protein; HET: FMN; 1.45A {Bacillus subtilis} PDB: 2pr6_A* Length = 132 | Back alignment and structure |
|---|
Score = 172 bits (439), Expect = 3e-50
Identities = 49/115 (42%), Positives = 73/115 (63%), Gaps = 2/115 (1%)
Query: 194 ALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKI 253
L + V++D D PI+Y + GF +MTGY ++E++G+NCRFLQG TDP +V I
Sbjct: 4 MLDHVRVGVVITDPALEDNPIVYVNQGFVQMTGYETEEILGKNCRFLQGKHTDPAEVDNI 63
Query: 254 RETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTE 308
R LQN + ++ NYKKDGT FWN L I P++ ++ F+G+Q +++K E
Sbjct: 64 RTALQNKEPVTVQIQNYKKDGTMFWNELNIDPMEIEDKTY--FVGIQNDITKQKE 116
|
| >3d72_A Vivid PAS protein VVD; circadian, photoreceptor, blue-light, LOV, signaling protein; HET: FAD; 1.65A {Neurospora crassa} PDB: 3is2_A* 2pd8_A* 3hjk_A* 2pdr_A* 2pd7_A* 2pdt_A* 3hji_A* 3rh8_B* Length = 149 | Back alignment and structure |
|---|
Score = 177 bits (452), Expect = 7e-52
Identities = 48/141 (34%), Positives = 76/141 (53%), Gaps = 26/141 (18%)
Query: 471 GIDLATTLERI--EKN-------------FVITDPRLPDNPIIFASDSFLELTEYSREEI 515
G D+ L +I N ++ D + D PI++AS++FL +T YS E+
Sbjct: 9 GYDIMGYLIQIMNRPNPQVELGPVDTSVALILCDLKQKDTPIVYASEAFLYMTGYSNAEV 68
Query: 516 LGRNCRFLQGPE-----------TDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLF 564
LGRNCRFLQ P+ D T+ +R AID +V V+++N+ K+G++F N
Sbjct: 69 LGRNCRFLQSPDGMVKPKSTRKYVDSNTINTMRKAIDRNAEVQVEVVNFKKNGQRFVNFL 128
Query: 565 HLQPMRDQKGEVQYFIGVQLD 585
+ P+RD+ GE +Y +G Q +
Sbjct: 129 TMIPVRDETGEYRYSMGFQCE 149
|
| >3d72_A Vivid PAS protein VVD; circadian, photoreceptor, blue-light, LOV, signaling protein; HET: FAD; 1.65A {Neurospora crassa} PDB: 3is2_A* 2pd8_A* 3hjk_A* 2pdr_A* 2pd7_A* 2pdt_A* 3hji_A* 3rh8_B* Length = 149 | Back alignment and structure |
|---|
Score = 169 bits (431), Expect = 4e-49
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 11/112 (9%)
Query: 202 FVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAG-----------TDPEDV 250
++ D + D PI+YAS F MTGY++ EV+GRNCRFLQ D +
Sbjct: 38 LILCDLKQKDTPIVYASEAFLYMTGYSNAEVLGRNCRFLQSPDGMVKPKSTRKYVDSNTI 97
Query: 251 AKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVE 302
+R+ + ++N+KK+G F N LT+ P++D+ G+ +G Q E
Sbjct: 98 NTMRKAIDRNAEVQVEVVNFKKNGQRFVNFLTMIPVRDETGEYRYSMGFQCE 149
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 184 bits (470), Expect = 9e-52
Identities = 62/318 (19%), Positives = 127/318 (39%), Gaps = 63/318 (19%)
Query: 641 VHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMK 700
+H H + ++ +++ + ++ +G G G LV+ G+ + +K
Sbjct: 1 MHHHHHHS-----SGVDLGTENLYFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIK 55
Query: 701 AMDKGVMLNRNK--------------------------TKTHVCLITDYCPGGELFLLLD 734
++ M ++ + + ++ DYC GG+LF ++
Sbjct: 56 EINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRIN 115
Query: 735 RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 794
Q + +ED + + ++ +AL+++H + I++RD+K +N+ L +G V L DF ++ +
Sbjct: 116 AQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL 175
Query: 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 854
+ +L + +GT Y++PEI + + D
Sbjct: 176 NSTVELA---------------------------RACIGTPYYLSPEICENKPYNNKSDI 208
Query: 855 WALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKS 914
WALG +LYE+ F + + I+ P S S + L+ +L R+P+
Sbjct: 209 WALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFP-PVSLHYSYDLRSLVSQLFKRNPRD 267
Query: 915 RLGSHEGANEIKKHPFFK 932
R N I + F
Sbjct: 268 RP----SVNSILEKGFIA 281
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 174 bits (444), Expect = 7e-49
Identities = 81/337 (24%), Positives = 120/337 (35%), Gaps = 85/337 (25%)
Query: 647 RKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV 706
R + P S +++ P + LG G + V + + +A+K +D
Sbjct: 2 RDAALPGS------HSTHGFY-ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTG 54
Query: 707 MLNRNK----------------------------------TKTHVCLITDYCPGGELFLL 732
+ + T T L+ D GELF
Sbjct: 55 GGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELF-- 112
Query: 733 LDRQPTKV-LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 791
D KV L E R ++ + LH I++RDLKPEN+LL + ++ LTDF S
Sbjct: 113 -DYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS 171
Query: 792 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA----- 846
C P L GT Y+APEII +
Sbjct: 172 CQ--LDPGEKLREV--------------------------CGTPSYLAPEIIECSMNDNH 203
Query: 847 -GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSS--TPTSLHAKQL 903
G+ VD W+ G+++Y +L G PF + + I+ + +F S S K L
Sbjct: 204 PGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDL 263
Query: 904 MYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 940
+ R L P+ R A E HPFF+ VR
Sbjct: 264 VSRFLVVQPQKRY----TAEEALAHPFFQQYVVEEVR 296
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 175 bits (445), Expect = 1e-48
Identities = 73/329 (22%), Positives = 122/329 (37%), Gaps = 64/329 (19%)
Query: 641 VHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMK 700
+H H S E N + K LG G V +GQ +A K
Sbjct: 1 MHHHHHHSSGVDLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAK 60
Query: 701 AMDKGVMLNRNK---------------------------TKTHVCLITDYCPGGELFLLL 733
+ K + + + LI +Y GGE+F L
Sbjct: 61 FLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLC 120
Query: 734 DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ---GNGHVSLTDFDL 790
+ +++ E+ V +++ + YLH I++ DLKP+N+LL G + + DF +
Sbjct: 121 LPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGM 180
Query: 791 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS 850
S +R +GT EY+APEI+ T+
Sbjct: 181 S--RKIGHA-----------------------CELR---EIMGTPEYLAPEILNYDPITT 212
Query: 851 AVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSST--PTSLHAKQLMYRLL 908
A D W +GI+ Y +L +PF G+ Q+T+ NI ++ + T S A + LL
Sbjct: 213 ATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLL 272
Query: 909 HRDPKSRLGSHEGANEIKKHPFFKGVNWA 937
++P+ R A H + + ++
Sbjct: 273 VKNPEKRP----TAEICLSHSWLQQWDFE 297
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 174 bits (442), Expect = 2e-48
Identities = 66/332 (19%), Positives = 117/332 (35%), Gaps = 75/332 (22%)
Query: 641 VHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMK 700
+H H S + + + +K +GSG + V V L Q +A+K
Sbjct: 1 MHHHHHHSSGVDLGTENLYFQS-MSVKGRIYSILKQIGSGGSSKVFQV-LNEKKQIYAIK 58
Query: 701 AMDKGVMLNRN----------------------------KTKTHVCLITDYCPGGELFLL 732
++ N+ T ++ ++ + +L
Sbjct: 59 YVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSW 117
Query: 733 LDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 792
L ++ K + + Y ++ A+ +H GI++ DLKP N L+ +G + L DF ++
Sbjct: 118 LKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIA- 173
Query: 793 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----- 847
+ P T + +S VGT Y+ PE I
Sbjct: 174 ------NQMQPDTTSVVK------------------DSQVGTVNYMPPEAIKDMSSSREN 209
Query: 848 ------HTSAVDWWALGILLYEMLYGYTPFRGKTRQ-KTFANILHKDLKFPSSTPTSLHA 900
+ D W+LG +LY M YG TPF+ Q I+ + +
Sbjct: 210 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL 269
Query: 901 KQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
+ ++ L RDPK R+ E+ HP+ +
Sbjct: 270 QDVLKCCLKRDPKQRI----SIPELLAHPYVQ 297
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 174 bits (442), Expect = 2e-48
Identities = 65/301 (21%), Positives = 106/301 (35%), Gaps = 56/301 (18%)
Query: 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDK-------------------- 704
I+ +H+ I+ LG G V LVE G ++A+K +
Sbjct: 25 IIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFN 84
Query: 705 --------GVMLNRNKTKTHVCLITDYCPGGELFLLLDRQPTKV--LKEDAVRFYAAEVV 754
L K L+ + G L+ ++R K L ED + + +
Sbjct: 85 HPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGIC 144
Query: 755 VALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKG 814
LE +H +G +RDLKP N+LL G L D S + + +
Sbjct: 145 RGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLG-----SMNQACIHVEGSRQ------ 193
Query: 815 QQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH---TSAVDWWALGILLYEMLYGYTPF 871
A ++ + T Y APE+ + H D W+LG +LY M++G P+
Sbjct: 194 -------ALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY 246
Query: 872 RGKTRQ-KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930
++ + A + L P S S QL+ ++ DP R +
Sbjct: 247 DMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRP----HIPLLLSQLE 302
Query: 931 F 931
Sbjct: 303 A 303
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 173 bits (440), Expect = 2e-48
Identities = 75/327 (22%), Positives = 125/327 (38%), Gaps = 89/327 (27%)
Query: 661 DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK-------- 712
SG+ + L + +G G G V L Y+AMK + K ++ +
Sbjct: 5 SSGDCVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPR 64
Query: 713 --------------------------------------------TKTHVCLITDYCPGGE 728
+ H+ ++ + G
Sbjct: 65 GTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGP 124
Query: 729 LFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 788
+ + +P L ED RFY +++ +EYLH Q II+RD+KP N+L+ +GH+ + DF
Sbjct: 125 VMEVPTLKP---LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADF 181
Query: 789 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH 848
+S LL T VGT ++APE ++
Sbjct: 182 GVSNEFK-GSDALLSNT--------------------------VGTPAFMAPESLSETRK 214
Query: 849 T---SAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMY 905
A+D WA+G+ LY ++G PF + + I + L+FP + K L+
Sbjct: 215 IFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLIT 274
Query: 906 RLLHRDPKSRLGSHEGANEIKKHPFFK 932
R+L ++P+SR+ EIK HP+
Sbjct: 275 RMLDKNPESRI----VVPEIKLHPWVT 297
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 172 bits (437), Expect = 3e-48
Identities = 53/301 (17%), Positives = 101/301 (33%), Gaps = 74/301 (24%)
Query: 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDK----------------------- 704
F+ I+ +GSG G V + G+ + +K +
Sbjct: 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHY 69
Query: 705 -------------GVMLNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAA 751
+ + + ++C G L ++++ + L +
Sbjct: 70 NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFE 129
Query: 752 EVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRR 811
++ ++Y+H + +I RDLKP N+ L V + DF L L ++
Sbjct: 130 QITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVT--------SLKNDGKRT-- 179
Query: 812 HKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 871
GT Y++PE I+ + VD +ALG++L E+L+
Sbjct: 180 ------------------RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHV--CD 219
Query: 872 RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
K F ++ +D K L+ +LL + P+ R +EI +
Sbjct: 220 TAFETSKFFTDL--RDGIISDI--FDKKEKTLLQKLLSKKPEDRP----NTSEILRTLTV 271
Query: 932 K 932
Sbjct: 272 W 272
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 171 bits (435), Expect = 6e-48
Identities = 71/307 (23%), Positives = 123/307 (40%), Gaps = 65/307 (21%)
Query: 657 QKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK---- 712
++ L I+ F + LGSG G VHLVE SG +K ++K +
Sbjct: 11 RENLYFQGTID-DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEA 69
Query: 713 ---------------------TKTHVCLITDYCPGGELF--LLLDRQPTKVLKEDAVRFY 749
++ ++ + C GGEL ++ + K L E V
Sbjct: 70 EIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAEL 129
Query: 750 AAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLSCLTSCKPQLLLPTTN 806
+++ AL Y H Q ++++DLKPEN+L Q + + + DF L+
Sbjct: 130 MKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA--------------- 174
Query: 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY 866
+ S + GT Y+APE+ T D W+ G+++Y +L
Sbjct: 175 ------------ELF-KSDEHSTNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLT 220
Query: 867 GYTPFRGKTRQKTFANILHKDLKFPSS-TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 925
G PF G + ++ +K+ + P + A L+ ++L +DP+ R A ++
Sbjct: 221 GCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRP----SAAQV 276
Query: 926 KKHPFFK 932
H +FK
Sbjct: 277 LHHEWFK 283
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 2e-47
Identities = 75/296 (25%), Positives = 118/296 (39%), Gaps = 72/296 (24%)
Query: 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK---------------------- 712
+ LGSG V G+G+ +A K + K + + +
Sbjct: 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 70
Query: 713 --------TKTHVCLITDYCPGGELFLLLDRQPTK-VLKEDAVRFYAAEVVVALEYLHCQ 763
KT V LI + GGELF D K L ED + +++ + YLH +
Sbjct: 71 ITLHDIFENKTDVVLILELVSGGELF---DFLAEKESLTEDEATQFLKQILDGVHYLHSK 127
Query: 764 GIIYRDLKPENVLLQ----GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPV 819
I + DLKPEN++L N + L DF ++ +
Sbjct: 128 RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA--HKIEAG-------------------- 165
Query: 820 FMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879
+ + GT E++APEI+ D W++G++ Y +L G +PF G+T+Q+T
Sbjct: 166 ---NEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQET 219
Query: 880 FANILHKDLKFPSST--PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933
NI + F TS AK + RLL +DPK R+ + +H + K
Sbjct: 220 LTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRM----TIAQSLEHSWIKA 271
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 171 bits (434), Expect = 4e-47
Identities = 62/308 (20%), Positives = 112/308 (36%), Gaps = 74/308 (24%)
Query: 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN------------- 711
+ + + +K +GSG + V V L Q +A+K ++ N+
Sbjct: 5 SVKGRIYSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 63
Query: 712 ---------------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVA 756
T ++ ++ + +L L ++ K + + Y ++ A
Sbjct: 64 LQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKK--KSIDPWERKSYWKNMLEA 120
Query: 757 LEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQ 816
+ +H GI++ DLKP N L+ +G + L DF ++ + +
Sbjct: 121 VHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIA------------------NQMQPDT 161
Query: 817 NPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-----------HTSAVDWWALGILLYEML 865
V +S VGT Y+ PE I + D W+LG +LY M
Sbjct: 162 TSVVK-------DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 214
Query: 866 YGYTPFRGKTRQ-KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 924
YG TPF+ Q I+ + + + ++ L RDPK R+ E
Sbjct: 215 YGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI----SIPE 270
Query: 925 IKKHPFFK 932
+ HP+ +
Sbjct: 271 LLAHPYVQ 278
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 170 bits (434), Expect = 6e-47
Identities = 64/304 (21%), Positives = 107/304 (35%), Gaps = 74/304 (24%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK---------------- 712
+ + +G G V +GQ FA+K +D +
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 713 -------------TKTHVCLITDYCPGGELFLLLDR-----QPTKVLKEDAVRFYAAEVV 754
+ + ++ ++ G +L V E Y +++
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLC---FEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 755 VALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRR 811
AL Y H II+RD+KP VLL + V L F ++
Sbjct: 141 EALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA-------------------- 180
Query: 812 HKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 871
+ + E + VGT ++APE++ + VD W G++L+ +L G PF
Sbjct: 181 -------IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
Query: 872 RGKTRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 929
G T+++ F I+ K + S AK L+ R+L DP R+ E HP
Sbjct: 234 YG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERI----TVYEALNHP 288
Query: 930 FFKG 933
+ K
Sbjct: 289 WLKE 292
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 169 bits (431), Expect = 6e-47
Identities = 58/335 (17%), Positives = 103/335 (30%), Gaps = 99/335 (29%)
Query: 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR------------- 710
+ + + LG G T +V +G FA+K + L
Sbjct: 4 QSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKK 63
Query: 711 --------------NKTKTHVCLITDYCPGGELF-LLLDRQPTKVLKEDAVRFYAAEVVV 755
T H LI ++CP G L+ +L + L E +VV
Sbjct: 64 LNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG 123
Query: 756 ALEYLHCQGIIYRDLKPENVLLQ----GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRR 811
+ +L GI++R++KP N++ G LTDF +
Sbjct: 124 GMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA-------------------- 163
Query: 812 HKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--------GHTSAVDWWALGILLYE 863
+ ++ S GTEEY+ P++ A + + VD W++G+ Y
Sbjct: 164 -RELEDDEQFV-------SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYH 215
Query: 864 MLYGYTPFRGKTRQKTFANILHK-------------------DLKFPSSTPTSLH----- 899
G PFR + +++K + + P S
Sbjct: 216 AATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGL 275
Query: 900 ---AKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
++ +L D + G ++
Sbjct: 276 QVLLTPVLANILEADQEKCW----GFDQFFAETSD 306
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 168 bits (427), Expect = 7e-47
Identities = 68/295 (23%), Positives = 114/295 (38%), Gaps = 66/295 (22%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK---------------- 712
Q++ +G G G V + G+ A K + K + + ++
Sbjct: 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI 68
Query: 713 --------TKTHVCLITDYCPGGELFLLLDRQPTKV-LKEDAVRFYAAEVVVALEYLHCQ 763
T + L+ + C GGELF +R K +E +V+ A+ Y H
Sbjct: 69 IRLYETFEDNTDIYLVMELCTGGELF---ERVVHKRVFRESDAARIMKDVLSAVAYCHKL 125
Query: 764 GIIYRDLKPENVLLQGNGHVS---LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVF 820
+ +RDLKPEN L + S L DF L+
Sbjct: 126 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLA---------------------------AR 158
Query: 821 MAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880
+P + + VGT Y++P+++ G + D W+ G+++Y +L GY PF T +
Sbjct: 159 F-KPGKMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVM 216
Query: 881 ANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933
I FP S A+ L+ RLL + PK R+ + + +H +F+
Sbjct: 217 LKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRI----TSLQALEHEWFEK 267
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 168 bits (428), Expect = 7e-47
Identities = 67/297 (22%), Positives = 115/297 (38%), Gaps = 67/297 (22%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK---------------- 712
++ + LG G V +G FA K ++ + R+
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 65
Query: 713 ----------TKTHVCLITDYCPGGELFLLLDRQPTKV-LKEDAVRFYAAEVVVALEYLH 761
++ L+ D GGELF + + E +++ ++ Y H
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELF---EDIVAREFYSEADASHCIQQILESIAYCH 122
Query: 762 CQGIIYRDLKPENVLLQG---NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNP 818
GI++R+LKPEN+LL V L DF L+
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--------------------------- 155
Query: 819 VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878
+ + A + F GT Y++PE++ ++ VD WA G++LY +L GY PF + + +
Sbjct: 156 IEV-NDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR 214
Query: 879 TFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933
+A I +PS + AK L+ +L +PK R+ A++ K P+
Sbjct: 215 LYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRI----TADQALKVPWICN 267
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 169 bits (430), Expect = 1e-46
Identities = 72/302 (23%), Positives = 113/302 (37%), Gaps = 72/302 (23%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK---------------- 712
+ + LGSG V +G +A K + K +
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 713 --------------TKTHVCLITDYCPGGELFLLLDRQPTK-VLKEDAVRFYAAEVVVAL 757
+T V LI + GGELF D K L E+ + +++ +
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELF---DFLAQKESLSEEEATSFIKQILDGV 128
Query: 758 EYLHCQGIIYRDLKPENVLLQ----GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 813
YLH + I + DLKPEN++L H+ L DF L+ +
Sbjct: 129 NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HEIEDG-------------- 172
Query: 814 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 873
+ + GT E++APEI+ D W++G++ Y +L G +PF G
Sbjct: 173 ---------VEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
Query: 874 KTRQKTFANILHKDLKFPSST--PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
T+Q+T ANI F TS AK + +LL ++ + RL E +HP+
Sbjct: 221 DTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRL----TIQEALRHPWI 276
Query: 932 KG 933
Sbjct: 277 TP 278
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304 | Back alignment and structure |
|---|
Score = 168 bits (428), Expect = 1e-46
Identities = 83/295 (28%), Positives = 123/295 (41%), Gaps = 66/295 (22%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK---------------- 712
+ F ++ LGSG V LV+ +G+ FA+K + K +
Sbjct: 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENI 68
Query: 713 --------TKTHVCLITDYCPGGELFLLLDRQPTKV-LKEDAVRFYAAEVVVALEYLHCQ 763
+ TH L+ GGELF DR + E +V+ A++YLH
Sbjct: 69 VTLEDIYESTTHYYLVMQLVSGGELF---DRILERGVYTEKDASLVIQQVLSAVKYLHEN 125
Query: 764 GIIYRDLKPENVLLQG---NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVF 820
GI++RDLKPEN+L N + +TDF LS K +QN +
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKIMITDFGLS---------------------KMEQNGIM 164
Query: 821 MAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880
+ GT Y+APE++A ++ AVD W++G++ Y +L GY PF +T K F
Sbjct: 165 S--------TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLF 216
Query: 881 ANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933
I +F S S AK + LL +DP R + HP+ G
Sbjct: 217 EKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERY----TCEKALSHPWIDG 267
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 169 bits (429), Expect = 2e-46
Identities = 71/294 (24%), Positives = 107/294 (36%), Gaps = 69/294 (23%)
Query: 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDK----------GVMLN----RN--------K 712
KPLG G S Q FA+K + K + N
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFH 76
Query: 713 TKTHVCLITDYCPGGELFLLLDR-QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLK 771
+ H L+ + GGELF +R + K E + ++V A+ ++H G+++RDLK
Sbjct: 77 DQLHTFLVMELLNGGELF---ERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLK 133
Query: 772 PENVLLQGNGHVS---LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRAS 828
PEN+L + DF + R K N
Sbjct: 134 PENLLFTDENDNLEIKIIDFGFA-------------------RLKPPDNQPLK------- 167
Query: 829 NSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT-------FA 881
+ T Y APE++ G+ + D W+LG++LY ML G PF+ R T
Sbjct: 168 -TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMK 226
Query: 882 NILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933
I D F S AK L+ LL DP RL + ++ + + +
Sbjct: 227 KIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRL----KMSGLRYNEWLQD 276
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 168 bits (428), Expect = 2e-46
Identities = 72/365 (19%), Positives = 117/365 (32%), Gaps = 103/365 (28%)
Query: 641 VHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMK 700
+H H + + S ++ + + +G G G V + + A+K
Sbjct: 1 MHHHHHHSSGR--ENLYFQGGSLLELQ-KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIK 57
Query: 701 AMDKGVMLNRNK-----------------------------TKTHVCLITDYCPGGELF- 730
M+K + N + ++CL+ + C GG L
Sbjct: 58 IMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLD 117
Query: 731 -------------------------------------LLLDRQPTKVLKEDAVRFYAAEV 753
V +E + ++
Sbjct: 118 KLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQI 177
Query: 754 VVALEYLHCQGIIYRDLKPENVLLQ--GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRR 811
AL YLH QGI +RD+KPEN L + + L DF LS K+
Sbjct: 178 FSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLS----------------KEFY 221
Query: 812 HKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH--TSAVDWWALGILLYEMLYGYT 869
M GT ++APE++ D W+ G+LL+ +L G
Sbjct: 222 KLNNGEYYGMTT-------KAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAV 274
Query: 870 PFRGKTRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927
PF G T + +L+K L F + S A+ L+ LL+R+ R A +
Sbjct: 275 PFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERF----DAMRALQ 330
Query: 928 HPFFK 932
HP+
Sbjct: 331 HPWIS 335
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 167 bits (426), Expect = 3e-46
Identities = 73/296 (24%), Positives = 114/296 (38%), Gaps = 72/296 (24%)
Query: 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK---------------------- 712
+ LGSG V +G +A K + K + +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 713 --------TKTHVCLITDYCPGGELFLLLDRQPTK-VLKEDAVRFYAAEVVVALEYLHCQ 763
KT V LI + GGELF D K L E+ + +++ + YLH
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELF---DFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 764 GIIYRDLKPENVLLQ----GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPV 819
I + DLKPEN++L + + DF L+
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA--HKIDFG-------------------- 171
Query: 820 FMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879
+ + GT E++APEI+ D W++G++ Y +L G +PF G T+Q+T
Sbjct: 172 ---NEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 225
Query: 880 FANILHKDLKFPSST--PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933
AN+ + +F TS AK + RLL +DPK R+ + +HP+ K
Sbjct: 226 LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM----TIQDSLQHPWIKP 277
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 166 bits (423), Expect = 4e-46
Identities = 64/308 (20%), Positives = 117/308 (37%), Gaps = 64/308 (20%)
Query: 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-------------------- 707
L F PI+ LG G G V + +A+K +
Sbjct: 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHP 63
Query: 708 -----------------LNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDA-VRFY 749
L + K ++ + C L ++ + T +E +
Sbjct: 64 GIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHI 123
Query: 750 AAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 809
++ A+E+LH +G+++RDLKP N+ + V + DF L + E++
Sbjct: 124 FLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVT--------AMDQDEEEQ 175
Query: 810 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYT 869
VGT+ Y++PE I G ++ VD ++LG++L+E+LY
Sbjct: 176 TVLTPMPAYARH-------TGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY--- 225
Query: 870 PFRGKT-RQKTFANILHKDLKFPS-STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927
PF + R +T ++ ++LKFP T ++ +L P R A I +
Sbjct: 226 PFSTQMERVRTLTDV--RNLKFPPLFTQKYPCEYVMVQDMLSPSPMERP----EAINIIE 279
Query: 928 HPFFKGVN 935
+ F+ ++
Sbjct: 280 NAVFEDLD 287
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 165 bits (421), Expect = 5e-46
Identities = 62/300 (20%), Positives = 110/300 (36%), Gaps = 67/300 (22%)
Query: 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK--------------- 712
+ + + +G+G G + G+ K +D G M K
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 713 -------------TKTHVCLITDYCPGGELFLLLDRQPTK--VLKEDAVRFYAAEVVVAL 757
T T + ++ +YC GG+L ++ + + L E+ V ++ +AL
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 758 EYLH-----CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRH 812
+ H +++RDLKP NV L G +V L DF L+
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA--------------------- 163
Query: 813 KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 872
+ + A +FVGT Y++PE + + D W+LG LLYE+ PF
Sbjct: 164 RILNHDTSFA------KTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT 217
Query: 873 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
++++ I + S +++ R+L+ R EI ++P
Sbjct: 218 AFSQKELAGKIREGKFR-RIPYRYSDELNEIITRMLNLKDYHRP----SVEEILENPLIL 272
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 168 bits (427), Expect = 6e-46
Identities = 72/302 (23%), Positives = 113/302 (37%), Gaps = 72/302 (23%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK---------------- 712
+ + LGSG V +G +A K + K +
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQ 71
Query: 713 --------------TKTHVCLITDYCPGGELFLLLDRQPTKV-LKEDAVRFYAAEVVVAL 757
+T V LI + GGELF D K L E+ + +++ +
Sbjct: 72 VLHPNIITLHDVYENRTDVVLILELVSGGELF---DFLAQKESLSEEEATSFIKQILDGV 128
Query: 758 EYLHCQGIIYRDLKPENVLLQ----GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 813
YLH + I + DLKPEN++L H+ L DF L+ +
Sbjct: 129 NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HEIEDG-------------- 172
Query: 814 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 873
+ + GT E++APEI+ D W++G++ Y +L G +PF G
Sbjct: 173 ---------VEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
Query: 874 KTRQKTFANILHKDLKFPSST--PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
T+Q+T ANI F TS AK + +LL ++ + RL E +HP+
Sbjct: 221 DTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRL----TIQEALRHPWI 276
Query: 932 KG 933
Sbjct: 277 TP 278
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 167 bits (426), Expect = 6e-46
Identities = 72/315 (22%), Positives = 114/315 (36%), Gaps = 65/315 (20%)
Query: 650 SPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN 709
+ +I + L + + +G G + FA+K +DK
Sbjct: 3 TVGVHSIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDP 62
Query: 710 RN---------------------KTKTHVCLITDYCPGGELFLLLDR-QPTKVLKEDAVR 747
+V ++T+ GGEL D+ K E
Sbjct: 63 TEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELL---DKILRQKFFSEREAS 119
Query: 748 FYAAEVVVALEYLHCQGIIYRDLKPENVLLQ----GNGHVSLTDFDLSCLTSCKPQLLLP 803
+ +EYLH QG+++RDLKP N+L + + DF +
Sbjct: 120 AVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFA------------ 167
Query: 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE 863
K+ R + + P T ++APE++ G+ +A D W+LG+LLY
Sbjct: 168 ----KQLRAENG----LLMTP-------CYTANFVAPEVLERQGYDAACDIWSLGVLLYT 212
Query: 864 MLYGYTPFRGK---TRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGS 918
ML GYTPF T ++ A I S AK L+ ++LH DP RL
Sbjct: 213 MLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRL-- 270
Query: 919 HEGANEIKKHPFFKG 933
A + +HP+
Sbjct: 271 --TAALVLRHPWIVH 283
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 167 bits (424), Expect = 6e-46
Identities = 67/288 (23%), Positives = 117/288 (40%), Gaps = 64/288 (22%)
Query: 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDK------------GVMLN---RN-------- 711
+ LG G+ G VH S + + K + ++ RN
Sbjct: 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESF 70
Query: 712 KTKTHVCLITDYCPGGELFLLLDRQPTK--VLKEDAVRFYAAEVVVALEYLHCQGIIYRD 769
++ + +I ++ G ++F +R T L E + Y +V AL++LH I + D
Sbjct: 71 ESMEELVMIFEFISGLDIF---ERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFD 127
Query: 770 LKPENVLLQ--GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRA 827
++PEN++ Q + + + +F + KP + R
Sbjct: 128 IRPENIIYQTRRSSTIKIIEFGQARQ--LKPG-----------------------DNFR- 161
Query: 828 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 887
EY APE+ ++A D W+LG L+Y +L G PF +T Q+ NI++ +
Sbjct: 162 --LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAE 219
Query: 888 LKFPSST--PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933
F S+ A + RLL ++ KSR+ A+E +HP+ K
Sbjct: 220 YTFDEEAFKEISIEAMDFVDRLLVKERKSRM----TASEALQHPWLKQ 263
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 171 bits (436), Expect = 7e-46
Identities = 77/349 (22%), Positives = 128/349 (36%), Gaps = 76/349 (21%)
Query: 641 VHPKPHRKDSPPWKAIQKILDSGEQINL--------QHFRPIKPLGSGDTGSVHLVELCG 692
+H H Q L + + + + ++ +K LGSG G V L
Sbjct: 1 MHHHHHHSSGRENLYFQGDLQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKV 60
Query: 693 SGQYFAMKAMDKGVMLNRNK--------------------------TKTHVCLITDYCPG 726
+ A+K + K + + K + L+ + G
Sbjct: 61 THVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKG 120
Query: 727 GELFLLLDR-QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ---GNGH 782
GELF D E +V+ + YLH I++RDLKPEN+LL+ +
Sbjct: 121 GELF---DEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDAL 177
Query: 783 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEI 842
+ + DF LS + E + +GT YIAPE+
Sbjct: 178 IKIVDFGLSA----------------------------VFENQKKMKERLGTAYYIAPEV 209
Query: 843 IAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSST--PTSLHA 900
+ + D W++G++L+ +L GY PF G+T Q+ + F S S A
Sbjct: 210 LRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGA 268
Query: 901 KQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDA 949
K L+ ++L D + R+ A + +HP+ K + + P L
Sbjct: 269 KDLIKQMLQFDSQRRI----SAQQALEHPWIKEMCSKKESGIELPSLAN 313
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 168 bits (428), Expect = 8e-46
Identities = 70/289 (24%), Positives = 112/289 (38%), Gaps = 65/289 (22%)
Query: 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK---------------------- 712
+ LGSG G VH +G+ F K ++ L++
Sbjct: 57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 116
Query: 713 --TKTHVCLITDYCPGGELFLLLDRQPTK--VLKEDAVRFYAAEVVVALEYLHCQGIIYR 768
K + LI ++ GGELF DR + + E V Y + L+++H I++
Sbjct: 117 FEDKYEMVLILEFLSGGELF---DRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHL 173
Query: 769 DLKPENVLLQ--GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMR 826
D+KPEN++ + V + DF L+ P
Sbjct: 174 DIKPENIMCETKKASSVKIIDFGLAT----------------------------KLNPDE 205
Query: 827 ASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 886
T E+ APEI+ D WA+G+L Y +L G +PF G+ +T N+
Sbjct: 206 IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRC 265
Query: 887 DLKFPSST--PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933
D +F S AK + LL ++P+ RL ++ +HP+ KG
Sbjct: 266 DWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRL----TVHDALEHPWLKG 310
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 171 bits (434), Expect = 9e-46
Identities = 67/313 (21%), Positives = 114/313 (36%), Gaps = 68/313 (21%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK---------------- 712
+ + + LG G G V + + Q +A+K ++K N++
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 713 ----------TKTHVCLITDYCPGGELFLLLDR-QPTKVLKEDAVRFYAAEVVVALEYLH 761
+ ++ + GGELF D K E +V + Y+H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELF---DEIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 762 CQGIIYRDLKPENVLLQ---GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNP 818
I++RDLKPEN+LL+ + + + DF LS
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF------------------------ 174
Query: 819 VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878
+ +GT YIAPE++ G + D W+ G++LY +L G PF GK
Sbjct: 175 ----QQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYD 229
Query: 879 TFANILHKDLKFPSST--PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936
+ F S AK L+ ++L P R+ A + +HP+ + +
Sbjct: 230 ILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRI----TATQCLEHPWIQKYSS 285
Query: 937 ALVRCMNPPELDA 949
+ P L++
Sbjct: 286 ETPTISDLPSLES 298
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 167 bits (425), Expect = 1e-45
Identities = 68/324 (20%), Positives = 124/324 (38%), Gaps = 68/324 (20%)
Query: 642 HPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKA 701
H + + ++++ + + ++ + LG G V +G FA K
Sbjct: 3 HMASMTGGQQMGRGSEFMMNASTKFS-DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKI 61
Query: 702 MDKGVMLNRNK--------------------------TKTHVCLITDYCPGGELFLLLDR 735
++ + R+ ++ L+ D GGELF +
Sbjct: 62 INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF---ED 118
Query: 736 QPTKV-LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLS 791
+ E +++ ++ Y H GI++R+LKPEN+LL V L DF L+
Sbjct: 119 IVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 178
Query: 792 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSA 851
+ + A + F GT Y++PE++ ++
Sbjct: 179 ---------------------------IEV-NDSEAWHGFAGTPGYLSPEVLKKDPYSKP 210
Query: 852 VDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLH 909
VD WA G++LY +L GY PF + + + +A I +PS + AK L+ +L
Sbjct: 211 VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLT 270
Query: 910 RDPKSRLGSHEGANEIKKHPFFKG 933
+PK R+ A++ K P+
Sbjct: 271 VNPKKRI----TADQALKVPWICN 290
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 1e-45
Identities = 67/300 (22%), Positives = 108/300 (36%), Gaps = 69/300 (23%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK---------------- 712
++ + LG G G V L + +GQ A+K + K + +
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 713 -----------TKTHVCLITDYCPGGELFLLLDR-QPTKVLKEDAVRFYAAEVVVALEYL 760
K + L+ + GGELF D K E +V+ + Y+
Sbjct: 86 PNIMKLYEFFEDKGYFYLVGEVYTGGELF---DEIISRKRFSEVDAARIIRQVLSGITYM 142
Query: 761 HCQGIIYRDLKPENVLLQ---GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQN 817
H I++RDLKPEN+LL+ + ++ + DF LS
Sbjct: 143 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF----------------------- 179
Query: 818 PVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877
E + +GT YIAPE++ G + D W+ G++LY +L G PF G
Sbjct: 180 -----EASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEY 233
Query: 878 KTFANILHKDLKFPSST--PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935
+ F S AK L+ ++L P R+ A + H + +
Sbjct: 234 DILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRI----SARDALDHEWIQTYT 289
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 167 bits (424), Expect = 2e-45
Identities = 88/384 (22%), Positives = 140/384 (36%), Gaps = 81/384 (21%)
Query: 595 NSIPEATAEESEKLVKQTAENVNEAVKELPDANLTPEDLWANHSKVVHPKPHRKDSPPWK 654
N E L E ++ L D +L A K+ +P ++ ++
Sbjct: 16 NKERRRARREIRHLPNLNREQRRAFIRSLRDDPSQSANLLAEAKKLNDAQPKGTENLYFQ 75
Query: 655 AIQKILDSGEQINLQHFRPI----KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR 710
++ + + + F +G G + V +G FA+K M+
Sbjct: 76 SMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLS 135
Query: 711 NK---------------------------------TKTHVCLITDYCPGGELFLLLDRQP 737
+ + + + L+ D GELF D
Sbjct: 136 PEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELF---DYLT 192
Query: 738 TKV-LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796
KV L E R ++ A+ +LH I++RDLKPEN+LL N + L+DF SC
Sbjct: 193 EKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCH--L 250
Query: 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA------GHTS 850
+P L GT Y+APEI+ + G+
Sbjct: 251 EPGEKLRE--------------------------LCGTPGYLAPEILKCSMDETHPGYGK 284
Query: 851 AVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLL 908
VD WA G++L+ +L G PF + + I+ +F S S K L+ RLL
Sbjct: 285 EVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLL 344
Query: 909 HRDPKSRLGSHEGANEIKKHPFFK 932
DP++RL A + +HPFF+
Sbjct: 345 QVDPEARL----TAEQALQHPFFE 364
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 163 bits (416), Expect = 2e-45
Identities = 65/297 (21%), Positives = 108/297 (36%), Gaps = 68/297 (22%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK---------------- 712
+ + + LG G G V + + Q +A+K ++K N++
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 713 ----------TKTHVCLITDYCPGGELFLLLDR-QPTKVLKEDAVRFYAAEVVVALEYLH 761
+ ++ + GGELF D K E +V + Y+H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELF---DEIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 762 CQGIIYRDLKPENVLLQ---GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNP 818
I++RDLKPEN+LL+ + + + DF LS
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS--------------------------- 171
Query: 819 VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878
+ +GT YIAPE++ G + D W+ G++LY +L G PF GK
Sbjct: 172 TCF-QQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD 229
Query: 879 TFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933
+ F S AK L+ ++L P R+ A + +HP+ +
Sbjct: 230 ILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRI----TATQCLEHPWIQK 282
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 166 bits (423), Expect = 3e-45
Identities = 79/380 (20%), Positives = 138/380 (36%), Gaps = 74/380 (19%)
Query: 586 GSEHLEPLRNSIPEATAEESEKLVKQTAENVNEAVKELPDANLTPEDLWANHSKVVHPKP 645
G+E+L S + + + + +P + L + P
Sbjct: 15 GTENLYFQSMKNSGDQDSRSGHNEAKEVWSNADLTERMPVKSKRTSALAVDIPAPPAPFD 74
Query: 646 HRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKG 705
HR + A+ + + LG G G VH E +G A K +
Sbjct: 75 HRIVTAKQGAVNSFYTVSKT---------EILGGGRFGQVHKCEETATGLKLAAKIIKTR 125
Query: 706 VMLNRNK------------------------TKTHVCLITDYCPGGELFLLLDRQPTK-- 739
M ++ + +K + L+ +Y GGELF DR +
Sbjct: 126 GMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELF---DRIIDESY 182
Query: 740 VLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ--GNGHVSLTDFDLSCLTSCK 797
L E + ++ + ++H I++ DLKPEN+L + + DF L+
Sbjct: 183 NLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLA------ 236
Query: 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWAL 857
RR+K + E ++ GT E++APE++ + D W++
Sbjct: 237 ------------RRYKPR-------EKLK---VNFGTPEFLAPEVVNYDFVSFPTDMWSV 274
Query: 858 GILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSST--PTSLHAKQLMYRLLHRDPKSR 915
G++ Y +L G +PF G +T NIL S AK+ + +LL ++ R
Sbjct: 275 GVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWR 334
Query: 916 LGSHEGANEIKKHPFFKGVN 935
+ A+E KHP+
Sbjct: 335 I----SASEALKHPWLSDHK 350
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 164 bits (418), Expect = 4e-45
Identities = 74/330 (22%), Positives = 126/330 (38%), Gaps = 70/330 (21%)
Query: 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN---------- 711
+ EQ ++ ++R +K +G G+ V L +G+ A+K +DK + +
Sbjct: 8 ADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRI 67
Query: 712 ----------------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVV 755
+T+ + LI +Y GGE+F L +KE R ++V
Sbjct: 68 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH--GRMKEKEARSKFRQIVS 125
Query: 756 ALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQ 815
A++Y H + I++RDLK EN+LL + ++ + DF S L
Sbjct: 126 AVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNE--FTVGGKLDA----------- 172
Query: 816 QNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT-SAVDWWALGILLYEMLYGYTPFRGK 874
F G Y APE+ G + VD W+LG++LY ++ G PF G+
Sbjct: 173 ---------------FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 217
Query: 875 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934
++ +L + P S + L+ R L +P R +I K +
Sbjct: 218 NLKELRERVLRGKYRIPFY--MSTDCENLLKRFLVLNPIKRG----TLEQIMKDRWIN-- 269
Query: 935 NWALVRCMNPPELDAPLFATDTEKEYKVVD 964
EL + + K +D
Sbjct: 270 -----AGHEEDELKPFVEPELDISDQKRID 294
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 165 bits (418), Expect = 1e-44
Identities = 36/220 (16%), Positives = 63/220 (28%), Gaps = 54/220 (24%)
Query: 726 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSL 785
G L + L A +V+ L LH G+++ L+P +++L G V L
Sbjct: 190 GEVLLSHSSTHKS--LVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFL 247
Query: 786 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG 845
T F+ A + + PE+ A
Sbjct: 248 TGFEHLVRDG-------------------------------ARVVSSVSRGFEPPELEAR 276
Query: 846 AG-----------HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSST 894
T + D WALG+++Y + P I P
Sbjct: 277 RATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFRSCKNIPQP- 335
Query: 895 PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934
+ L+ L + RL + + P ++ +
Sbjct: 336 -----VRALLEGFLRYPKEDRL----LPLQAMETPEYEQL 366
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 163 bits (415), Expect = 1e-44
Identities = 67/295 (22%), Positives = 106/295 (35%), Gaps = 72/295 (24%)
Query: 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDK------------------------GVMLNR 710
+ LG G G V +GQ A+K + V N
Sbjct: 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENM 94
Query: 711 NKTKTHVCLITDYCPGGELFLLLDR---QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIY 767
+ K + +I + GGELF R + + E ++ A+++LH I +
Sbjct: 95 HHGKRCLLIIMECMEGGELF---SRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAH 151
Query: 768 RDLKPENVLLQGNGHVS---LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEP 824
RD+KPEN+L + LTDF + K
Sbjct: 152 RDVKPENLLYTSKEKDAVLKLTDFGFA---------------------KETTQNALQ--- 187
Query: 825 MRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANIL 884
+ T Y+APE++ + + D W+LG+++Y +L G+ PF T Q +
Sbjct: 188 -----TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMK 242
Query: 885 HK----DLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933
+ FP+ + S AKQL+ LL DP RL + HP+
Sbjct: 243 RRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERL----TITQFMNHPWINQ 293
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 165 bits (419), Expect = 1e-44
Identities = 59/341 (17%), Positives = 105/341 (30%), Gaps = 95/341 (27%)
Query: 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR----------- 710
+ + + LG G T +V +G FA+K + L
Sbjct: 2 GSQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVL 61
Query: 711 ----------------NKTKTHVCLITDYCPGGELF-LLLDRQPTKVLKEDAVRFYAAEV 753
T H LI ++CP G L+ +L + L E +V
Sbjct: 62 KKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDV 121
Query: 754 VVALEYLHCQGIIYRDLKPENVLLQ----GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 809
V + +L GI++R++KP N++ G LTDF +
Sbjct: 122 VGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA------------------ 163
Query: 810 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--------GHTSAVDWWALGILL 861
+ ++ S GTEEY+ P++ A + + VD W++G+
Sbjct: 164 ---RELEDDEQF-------VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTF 213
Query: 862 YEMLYGYTPFRGKTRQKTFANILHK-------------------DLKFPSSTPTSLH--- 899
Y G PFR + +++K + + P S
Sbjct: 214 YHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSR 273
Query: 900 -----AKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935
++ +L D + G + E ++
Sbjct: 274 GLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRMVIH 314
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 166 bits (423), Expect = 1e-44
Identities = 68/297 (22%), Positives = 114/297 (38%), Gaps = 66/297 (22%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK---------------- 712
+ ++ + LG G V +GQ +A ++ + R+
Sbjct: 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHP 70
Query: 713 ----------TKTHVCLITDYCPGGELFLLLDRQPTKV-LKEDAVRFYAAEVVVALEYLH 761
+ H LI D GGELF + + E +++ A+ + H
Sbjct: 71 NIVRLHDSISEEGHHYLIFDLVTGGELF---EDIVAREYYSEADASHCIQQILEAVLHCH 127
Query: 762 CQGIIYRDLKPENVLLQG---NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNP 818
G+++R+LKPEN+LL V L DF L+
Sbjct: 128 QMGVVHRNLKPENLLLASKLKGAAVKLADFGLA--------------------------- 160
Query: 819 VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878
+ + +A F GT Y++PE++ + VD WA G++LY +L GY PF + + +
Sbjct: 161 IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR 220
Query: 879 TFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933
+ I FPS + AK L+ ++L +P R+ A E KHP+
Sbjct: 221 LYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRI----TAAEALKHPWISH 273
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 164 bits (417), Expect = 2e-44
Identities = 68/352 (19%), Positives = 122/352 (34%), Gaps = 75/352 (21%)
Query: 621 KELPDANLTPEDLWANHSKVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSG 680
+P + E A + P KA + + + + +K +GSG
Sbjct: 9 GLVPRGSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANEC-ISVKGRIYSILKQIGSG 67
Query: 681 DTGSVHLVELCGSGQYFAMKAMDKGVMLNRN----------------------------K 712
+ V V L Q +A+K ++ N+
Sbjct: 68 GSSKVFQV-LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI 126
Query: 713 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKP 772
T ++ ++ + +L L ++ K + + Y ++ A+ +H GI++ DLKP
Sbjct: 127 TDQYIYMVMECG-NIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKP 183
Query: 773 ENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFV 832
N L+ +G + L DF ++ + P T + +S V
Sbjct: 184 ANFLIV-DGMLKLIDFGIA-------NQMQPDTTSVVK------------------DSQV 217
Query: 833 GTEEYIAPEIIAGAG-----------HTSAVDWWALGILLYEMLYGYTPFRGKTRQ-KTF 880
G Y+ PE I + D W+LG +LY M YG TPF+ Q
Sbjct: 218 GAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 277
Query: 881 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
I+ + + + ++ L RDPK R+ E+ HP+ +
Sbjct: 278 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI----SIPELLAHPYVQ 325
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 167 bits (424), Expect = 3e-44
Identities = 69/343 (20%), Positives = 111/343 (32%), Gaps = 86/343 (25%)
Query: 641 VHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPI-------KPLGSGDTGSVHLVELCGS 693
+H H Q I + + I + LGSG G V L +
Sbjct: 1 MHHHHHHSSGRENLYFQGIAINPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNG 60
Query: 694 GQYFAMKAMDKGVMLNRNKT-------------------------------------KTH 716
A+K + K + K +
Sbjct: 61 HSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKY 120
Query: 717 VCLITDYCPGGELFLLLDR-QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 775
L+T++ GGELF ++ E +++ + YLH I++RD+KPEN+
Sbjct: 121 FYLVTEFYEGGELF---EQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENI 177
Query: 776 LLQ---GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFV 832
LL+ ++ + DF LS +
Sbjct: 178 LLENKNSLLNIKIVDFGLSS----------------------------FFSKDYKLRDRL 209
Query: 833 GTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPS 892
GT YIAPE++ + D W+ G+++Y +L GY PF G+ Q + F
Sbjct: 210 GTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDF 268
Query: 893 ST--PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933
+ S AK+L+ +L D R A E + K
Sbjct: 269 NDWKNISDEAKELIKLMLTYDYNKRC----TAEEALNSRWIKK 307
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 168 bits (427), Expect = 3e-44
Identities = 73/375 (19%), Positives = 131/375 (34%), Gaps = 78/375 (20%)
Query: 591 EPLRNSIPEATAEESEKLVKQTAENVNEAVKELPDANLTPEDLWANHSKVVHPKPHRKDS 650
+P + P + K ++ +V+E K + + + +
Sbjct: 92 KPCEPTAPVLIPGDERK--RRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVE 149
Query: 651 PPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR 710
+ D E+ LG+G G VH V +G FA K + ++
Sbjct: 150 IKHDHVLDHYDIHEE-----------LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK 198
Query: 711 NK------------------------TKTHVCLITDYCPGGELFLLLDRQPTK--VLKED 744
+ +I ++ GGELF ++ + + ED
Sbjct: 199 ETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELF---EKVADEHNKMSED 255
Query: 745 AVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ--GNGHVSLTDFDLSCLTSCKPQLLL 802
Y +V L ++H ++ DLKPEN++ + + L DF L+
Sbjct: 256 EAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTA---------- 305
Query: 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 862
+P ++ GT E+ APE+ G D W++G+L Y
Sbjct: 306 ------------------HLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSY 347
Query: 863 EMLYGYTPFRGKTRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHE 920
+L G +PF G+ +T N+ D S + S K + +LL DP +R+
Sbjct: 348 ILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRM---- 403
Query: 921 GANEIKKHPFFKGVN 935
++ +HP+ N
Sbjct: 404 TIHQALEHPWLTPGN 418
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 160 bits (406), Expect = 5e-44
Identities = 63/294 (21%), Positives = 115/294 (39%), Gaps = 62/294 (21%)
Query: 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK--------------- 712
++ + ++ LG G G V L + + A+K +D ++ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 713 ----------TKTHVCLITDYCPGGELFLLLDRQPTKV-LKEDAVRFYAAEVVVALEYLH 761
L +YC GGELF DR + + E + + +++ + YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELF---DRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 762 CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL-LLPTTNEKKRRHKGQQNPVF 820
GI +RD+KPEN+LL ++ ++DF L+ + + LL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--------------- 167
Query: 821 MAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTR-QK 878
GT Y+APE++ H VD W+ GI+L ML G P+ + +
Sbjct: 168 -----------CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ 216
Query: 879 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
+++ K L++++L +P +R+ +IKK ++
Sbjct: 217 EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARI----TIPDIKKDRWYN 266
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 160 bits (406), Expect = 1e-43
Identities = 79/306 (25%), Positives = 117/306 (38%), Gaps = 76/306 (24%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKTK-------------- 714
+ K LGSG G V L + + A+K + K + +
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 715 -----------------THVCLITDYCPGGELFLLLDRQPTKV-LKEDAVRFYAAEVVVA 756
++ + GGELF D+ LKE + Y ++++A
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYYIVLELMEGGELF---DKVVGNKRLKEATCKLYFYQMLLA 126
Query: 757 LEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 813
++YLH GII+RDLKPENVLL + + +TDF S K
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS---------------------K 165
Query: 814 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTP 870
M + GT Y+APE++ AG+ AVD W+LG++L+ L GY P
Sbjct: 166 ILGETSLM-------RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
Query: 871 FRGKTRQKT-FANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927
F Q + I F S A L+ +LL DPK+R E +
Sbjct: 219 FSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARF----TTEEALR 274
Query: 928 HPFFKG 933
HP+ +
Sbjct: 275 HPWLQD 280
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 158 bits (402), Expect = 2e-43
Identities = 69/297 (23%), Positives = 115/297 (38%), Gaps = 64/297 (21%)
Query: 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN------------ 711
++ + H+ LG G G V + E +G A+K +++ + + +
Sbjct: 6 GRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNL 65
Query: 712 ---------------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVA 756
T T ++ +Y GGELF + + ++E R +++ A
Sbjct: 66 KLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH--GRVEEMEARRLFQQILSA 123
Query: 757 LEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQ 816
++Y H +++RDLKPENVLL + + + DF LS + L T
Sbjct: 124 VDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEFLRT------------ 169
Query: 817 NPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKT 875
G+ Y APE+I+G VD W+ G++LY +L G PF +
Sbjct: 170 --------------SCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH 215
Query: 876 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
F I P S L+ +L DP R +I++H +FK
Sbjct: 216 VPTLFKKIRGGVFYIPEYLNRS--VATLLMHMLQVDPLKRATIK----DIREHEWFK 266
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 160 bits (407), Expect = 2e-43
Identities = 82/290 (28%), Positives = 127/290 (43%), Gaps = 64/290 (22%)
Query: 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDK-----------GVMLNRN-----------K 712
LG G T V+ + G+ + +A+K + K GV+L + +
Sbjct: 59 SELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFE 118
Query: 713 TKTHVCLITDYCPGGELFLLLDRQPTKV-LKEDAVRFYAAEVVVALEYLHCQGIIYRDLK 771
T T + L+ + GGELF DR K E +++ A+ YLH GI++RDLK
Sbjct: 119 TPTEISLVLELVTGGELF---DRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLK 175
Query: 772 PENVLLQ---GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRAS 828
PEN+L + + + DF LS + + Q+L+ T
Sbjct: 176 PENLLYATPAPDAPLKIADFGLSKI--VEHQVLMKT------------------------ 209
Query: 829 NSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK-TFANILHKD 887
GT Y APEI+ G + VD W++GI+ Y +L G+ PF + + F IL+ +
Sbjct: 210 --VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCE 267
Query: 888 LKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935
F S SL+AK L+ +L+ DPK RL + +HP+ G
Sbjct: 268 YYFISPWWDEVSLNAKDLVRKLIVLDPKKRL----TTFQALQHPWVTGKA 313
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 162 bits (412), Expect = 2e-43
Identities = 79/306 (25%), Positives = 118/306 (38%), Gaps = 76/306 (24%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKTK-------------- 714
+ K LGSG G V L + + A++ + K + +
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 715 -----------------THVCLITDYCPGGELFLLLDR-QPTKVLKEDAVRFYAAEVVVA 756
++ + GGELF D+ K LKE + Y ++++A
Sbjct: 195 KKLNHPCIIKIKNFFDAEDYYIVLELMEGGELF---DKVVGNKRLKEATCKLYFYQMLLA 251
Query: 757 LEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 813
++YLH GII+RDLKPENVLL + + +TDF S K
Sbjct: 252 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS---------------------K 290
Query: 814 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTP 870
M + GT Y+APE++ AG+ AVD W+LG++L+ L GY P
Sbjct: 291 ILGETSLM-------RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
Query: 871 FRGKTRQKT-FANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927
F Q + I F S A L+ +LL DPK+R E +
Sbjct: 344 FSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARF----TTEEALR 399
Query: 928 HPFFKG 933
HP+ +
Sbjct: 400 HPWLQD 405
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 160 bits (406), Expect = 4e-43
Identities = 76/306 (24%), Positives = 115/306 (37%), Gaps = 64/306 (20%)
Query: 657 QKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN----- 711
LD + + +K +GSG+ G L+ + + A+K +++G ++ N
Sbjct: 8 TGPLDMPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREI 67
Query: 712 ------------------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEV 753
T TH+ +I +Y GGEL+ + ED RF+ ++
Sbjct: 68 INHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNA--GRFSEDEARFFFQQL 125
Query: 754 VVALEYLHCQGIIYRDLKPENVLLQGN--GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRR 811
+ + Y H I +RDLK EN LL G+ + + DF S S +T
Sbjct: 126 LSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYS--KSSVLHSQPKST------ 177
Query: 812 HKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTP 870
VGT YIAPE++ D W+ G+ LY ML G P
Sbjct: 178 --------------------VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYP 217
Query: 871 FRGKTR----QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926
F +KT IL P S L+ R+ DP +R+ EIK
Sbjct: 218 FEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRI----SIPEIK 273
Query: 927 KHPFFK 932
H +F
Sbjct: 274 THSWFL 279
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 158 bits (401), Expect = 4e-43
Identities = 67/310 (21%), Positives = 103/310 (33%), Gaps = 71/310 (22%)
Query: 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN------------------------- 709
LG G G V V + A+K + K +
Sbjct: 11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70
Query: 710 -----RNKTKTHVCLITDYCPGG--ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC 762
N+ K + ++ +YC G E+ D P K Y +++ LEYLH
Sbjct: 71 LVDVLYNEEKQKMYMVMEYCVCGMQEML---DSVPEKRFPVCQAHGYFCQLIDGLEYLHS 127
Query: 763 QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC-KPQLLLPTTNEKKRRHKGQQNPVFM 821
QGI+++D+KP N+LL G + ++ ++ T+
Sbjct: 128 QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS---------------- 171
Query: 822 AEPMRASNSFVGTEEYIAPEIIAGAG--HTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879
G+ + PEI G VD W+ G+ LY + G PF G K
Sbjct: 172 ----------QGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKL 221
Query: 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF-KGVNWAL 938
F NI P L+ +L +P R +I++H +F K A
Sbjct: 222 FENIGKGSYAIPGDCGPP--LSDLLKGMLEYEPAKRFSIR----QIRQHSWFRKKHPPAE 275
Query: 939 VRCMNPPELD 948
PP D
Sbjct: 276 APVPIPPSPD 285
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 159 bits (403), Expect = 5e-43
Identities = 67/359 (18%), Positives = 121/359 (33%), Gaps = 83/359 (23%)
Query: 649 DSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML 708
+ PP + L + E Q + + PLGSG G V + +K + K +L
Sbjct: 4 EEPPKAVELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVL 63
Query: 709 NRN--------------------------------KTKTHVCLITD-YCPGGELFLLLDR 735
+ + L+ + + G +LF +DR
Sbjct: 64 EDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDR 123
Query: 736 QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795
P L E + ++V A+ YL + II+RD+K EN+++ + + L DF +
Sbjct: 124 HPR--LDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL- 180
Query: 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT-SAVDW 854
+ L T F GT EY APE++ G + ++
Sbjct: 181 -ERGKLFYT--------------------------FCGTIEYCAPEVLMGNPYRGPELEM 213
Query: 855 WALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKS 914
W+LG+ LY +++ PF + + P S L+ LL P+
Sbjct: 214 WSLGVTLYTLVFEENPFCE------LEETVEAAIHPPY--LVSKELMSLVSGLLQPVPER 265
Query: 915 RLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDTEKEYKVVDPGMQDLQQN 973
R ++ P+ + +N + + E V+ ++
Sbjct: 266 RT----TLEKLVTDPWVT-------QPVNLADYTWEEVFRVNKPESGVLSAASLEMGNR 313
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 157 bits (400), Expect = 9e-43
Identities = 71/310 (22%), Positives = 113/310 (36%), Gaps = 78/310 (25%)
Query: 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK---------------------- 712
LG G V + Q +A+K ++K R++
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIE 78
Query: 713 ---TKTHVCLITDYCPGGELFLLLDR-QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYR 768
+ L+ + GG + + E +V AL++LH +GI +R
Sbjct: 79 FFEEEDRFYLVFEKMRGGSIL---SHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHR 135
Query: 769 DLKPENVLLQGNGHVS---LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPM 825
DLKPEN+L + VS + DFDL +
Sbjct: 136 DLKPENILCEHPNQVSPVKICDFDLG-----------------SGIKLNGDCSPISTPEL 178
Query: 826 RASNSFVGTEEYIAPEIIAGAGHTS-----AVDWWALGILLYEMLYGYTPFRGK------ 874
+ G+ EY+APE++ + D W+LG++LY +L GY PF G+
Sbjct: 179 L---TPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCG 235
Query: 875 ---------TRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 923
+ F +I +FP S AK L+ +LL RD K RL A
Sbjct: 236 WDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRL----SAA 291
Query: 924 EIKKHPFFKG 933
++ +HP+ +G
Sbjct: 292 QVLQHPWVQG 301
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 1e-42
Identities = 62/293 (21%), Positives = 114/293 (38%), Gaps = 60/293 (20%)
Query: 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK--------------- 712
++ + ++ LG G G V L + + A+K +D ++ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 713 ----------TKTHVCLITDYCPGGELFLLLDRQPTKV-LKEDAVRFYAAEVVVALEYLH 761
L +YC GGELF DR + + E + + +++ + YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELF---DRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 762 CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFM 821
GI +RD+KPEN+LL ++ ++DF L+ + + L
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK---------------- 166
Query: 822 AEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTR-QKT 879
GT Y+APE++ H VD W+ GI+L ML G P+ + +
Sbjct: 167 ---------MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
Query: 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
+++ K L++++L +P +R+ +IKK ++
Sbjct: 218 YSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARI----TIPDIKKDRWYN 266
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 1e-42
Identities = 67/328 (20%), Positives = 111/328 (33%), Gaps = 71/328 (21%)
Query: 642 HPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKA 701
P P + P + + I + + LG G G V + + + FA+K
Sbjct: 35 PPPPPPQQFPQFHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKM 94
Query: 702 MDK------------------------GVMLNRNKTKTHVCLITDYCPGGELFLLLDR-- 735
+ V N + + ++ + GGELF R
Sbjct: 95 LQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELF---SRIQ 151
Query: 736 -QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS---LTDFDLS 791
+ + E + A++YLH I +RD+KPEN+L + LTDF +
Sbjct: 152 DRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211
Query: 792 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSA 851
T+ L + T Y+APE++ + +
Sbjct: 212 KETTSHNSL----------------------------TTPCYTPYYVAPEVLGPEKYDKS 243
Query: 852 VDWWALGILLYEMLYGYTPFRGKTRQKT----FANILHKDLKFPSS--TPTSLHAKQLMY 905
D W+LG+++Y +L GY PF I +FP+ + S K L+
Sbjct: 244 CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 303
Query: 906 RLLHRDPKSRLGSHEGANEIKKHPFFKG 933
LL +P R+ E HP+
Sbjct: 304 NLLKTEPTQRM----TITEFMNHPWIMQ 327
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 156 bits (397), Expect = 2e-42
Identities = 67/319 (21%), Positives = 112/319 (35%), Gaps = 65/319 (20%)
Query: 643 PKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAM 702
P P KA++ + L +FR K +G G V+ G A+K +
Sbjct: 9 QGPPVPQFQPQKALRPDMGYNT---LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKV 65
Query: 703 D-KGVMLNRNK--------------------------TKTHVCLITDYCPGGELFLLL-- 733
+M + + + ++ + G+L ++
Sbjct: 66 QIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKH 125
Query: 734 DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793
++ +++ E V Y ++ ALE++H + +++RD+KP NV + G V L D L
Sbjct: 126 FKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRF 185
Query: 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVD 853
S K +S VGT Y++PE I G+ D
Sbjct: 186 FSSKTTAA---------------------------HSLVGTPYYMSPERIHENGYNFKSD 218
Query: 854 WWALGILLYEMLYGYTPFRGKTRQKT--FANILHKDLKFPSSTPTSLHAKQLMYRLLHRD 911
W+LG LLYEM +PF G I D S S +QL+ ++ D
Sbjct: 219 IWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPD 278
Query: 912 PKSRLGSHEGANEIKKHPF 930
P+ R +
Sbjct: 279 PEKRP----DVTYVYDVAK 293
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 156 bits (396), Expect = 2e-41
Identities = 38/235 (16%), Positives = 66/235 (28%), Gaps = 43/235 (18%)
Query: 723 YCPGGELFLLLDRQPT--KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN 780
+L + K L A +V+ L LH G+++ L+P +++L
Sbjct: 188 QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQR 247
Query: 781 GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAP 840
G V LT F+ A + E A
Sbjct: 248 GGVFLTGFEHLV--------------------------RDGASAVSPIGRGFAPPETTAE 281
Query: 841 EIIAGAGH-----TSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTP 895
++ H T A D W LG+ +Y + P I P
Sbjct: 282 RMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRSCKNIPQP-- 339
Query: 896 TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAP 950
+ L+ L + RL + + P ++ + L + + D
Sbjct: 340 ----VRALLEGFLRYPKEDRL----LPLQAMETPEYEQLRTELSAALPLYQTDGE 386
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 154 bits (389), Expect = 6e-41
Identities = 46/307 (14%), Positives = 88/307 (28%), Gaps = 55/307 (17%)
Query: 639 KVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFA 698
KV + + + + L P + L+ + +
Sbjct: 93 KVFT-MGAENSRSELERLHEATFA--AARLLGESPEEARDR-----RRLLLPSDAVAVQS 144
Query: 699 MKAMDKGVMLNRNKTKTHVCLITDYCPG--GELFLLLDRQPTK--VLKEDAVRFYAAEVV 754
+ + + L+ LF LD A+ A+++
Sbjct: 145 QPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLI 204
Query: 755 VALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKG 814
L +G+++ P+N+ + +G + L D
Sbjct: 205 RLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSAL----------------------- 241
Query: 815 QQNPVFMAEPMRASNSFVGTEEYIAPEII--AGAGHTSAVDWWALGILLYEMLYGYTPFR 872
+ + Y E + + A T A++ W LG+ +Y + + PF
Sbjct: 242 -------WKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFG 294
Query: 873 GKT-------RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 925
T ++ + L F S TP K L+ R L+ D + RL E
Sbjct: 295 LVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRL----LPLEA 350
Query: 926 KKHPFFK 932
+ P F
Sbjct: 351 METPEFL 357
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 156 bits (396), Expect = 8e-41
Identities = 72/330 (21%), Positives = 121/330 (36%), Gaps = 76/330 (23%)
Query: 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN------------ 711
++ + H+ LG G G V + + +G A+K +++ + + +
Sbjct: 11 GRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNL 70
Query: 712 ---------------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVA 756
T + + ++ +Y GGELF + + L E R +++
Sbjct: 71 KLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKN--GRLDEKESRRLFQQILSG 128
Query: 757 LEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQ 816
++Y H +++RDLKPENVLL + + + DF LS + L T
Sbjct: 129 VDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEFLRT------------ 174
Query: 817 NPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKT 875
G+ Y APE+I+G VD W+ G++LY +L G PF
Sbjct: 175 --------------SCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH 220
Query: 876 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935
F I P S L+ +L DP R +I++H +FK
Sbjct: 221 VPTLFKKICDGIFYTPQYLNPS--VISLLKHMLQVDPMKRATIK----DIREHEWFK--- 271
Query: 936 WALVRCMNPPELDAPLFATDTEKEYKVVDP 965
+L LF D ++D
Sbjct: 272 ---------QDLPKYLFPEDPSYSSTMIDD 292
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 152 bits (385), Expect = 1e-40
Identities = 66/340 (19%), Positives = 106/340 (31%), Gaps = 65/340 (19%)
Query: 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKTK---------- 714
++ R + L G V+ + GSG+ +A+K +
Sbjct: 24 ELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLS 83
Query: 715 -----------------------THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAA 751
L+T+ C G + L + L D V
Sbjct: 84 GHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFY 143
Query: 752 EVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 809
+ A++++H Q II+RDLK EN+LL G + L DF + S P
Sbjct: 144 QTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRAL 203
Query: 810 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH---TSAVDWWALGILLYEMLY 866
+ +N T Y PEII + D WALG +LY + +
Sbjct: 204 VEEEITRN---------------TTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCF 248
Query: 867 GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926
PF + + I++ P L+ +L +P+ RL E+
Sbjct: 249 RQHPFEDGAKLR----IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERL----SIAEVV 300
Query: 927 KHPFFKGVNWALVRCMNPPELDAPLFATDTEKEYKVVDPG 966
A R +NP L + + G
Sbjct: 301 HQLQ----EIAAARNVNPKSPITELLEQNGGYGSATLSRG 336
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 4e-40
Identities = 50/354 (14%), Positives = 103/354 (29%), Gaps = 89/354 (25%)
Query: 638 SKVVHPKPHRKDSPPWKAIQKILDSGEQINL--QHFRPIKPLGSGDTGSVHLVE-----L 690
S + P ++ W+ + + L + LG G V+
Sbjct: 32 SGLSKPVSSYPNTFEWQCKLPAIKPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLND 91
Query: 691 CGSGQYFAMKAMDKGV---------MLNRNK---------------TKTHVCLITDYCPG 726
+ Q F +K ++ R K + L+ +
Sbjct: 92 AKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSY 151
Query: 727 GELFLLLDR---QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---- 779
G L ++ P KV+ + V +A ++ +E +H II+ D+KP+N +L
Sbjct: 152 GTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLE 211
Query: 780 -------NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFV 832
+ ++L D S P+ +F +
Sbjct: 212 QDDEDDLSAGLALIDLGQSIDMKLFPK-----------------GTIF--------TAKC 246
Query: 833 GTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP--------------FRGKTRQK 878
T + E+++ +D++ + +Y ML+G FR
Sbjct: 247 ETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFRRLPHLD 306
Query: 879 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
+ H L P L + L+ + L + + + ++
Sbjct: 307 MWNEFFHVMLNIPD--CHHLPSLDLLRQKLKKVFQQHYTNK---IRALRNRLIV 355
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 150 bits (380), Expect = 4e-40
Identities = 48/226 (21%), Positives = 97/226 (42%), Gaps = 25/226 (11%)
Query: 711 NKTKTHVCLITDYCPGGELFLLLDRQ-PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRD 769
+ K ++ + C L ++R+ + + ++ A+E+LH +G+++RD
Sbjct: 130 SSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRD 189
Query: 770 LKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASN 829
LKP N+ + V + DF L + E++
Sbjct: 190 LKPSNIFFTMDDVVKVGDFGLVT--------AMDQDEEEQTVLTPM-------PAYATHT 234
Query: 830 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 889
VGT+ Y++PE I G ++ VD ++LG++L+E+LY ++ R + ++ ++LK
Sbjct: 235 GQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFST--QMERVRIITDV--RNLK 290
Query: 890 FPS-STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934
FP T ++ +L P R A +I ++ F+ +
Sbjct: 291 FPLLFTQKYPQEHMMVQDMLSPSPTERP----EATDIIENAIFENL 332
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 150 bits (380), Expect = 7e-40
Identities = 74/299 (24%), Positives = 119/299 (39%), Gaps = 65/299 (21%)
Query: 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN---------- 711
+ + ++ + + LG G G V L + Q A+K + + ++ +
Sbjct: 2 AISKRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREIS 61
Query: 712 -----------------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVV 754
T T + ++ +Y GGELF + + K + ED R + +++
Sbjct: 62 YLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEK--KRMTEDEGRRFFQQII 118
Query: 755 VALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKG 814
A+EY H I++RDLKPEN+LL N +V + DF LS + L T
Sbjct: 119 CAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIM--TDGNFLKT---------- 166
Query: 815 QQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRG 873
G+ Y APE+I G VD W+ GI+LY ML G PF
Sbjct: 167 ----------------SCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDD 210
Query: 874 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
+ F + P A+ L+ R++ DP R+ EI++ P+F
Sbjct: 211 EFIPNLFKKVNSCVYVMPDFLSPG--AQSLIRRMIVADPMQRI----TIQEIRRDPWFN 263
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 148 bits (377), Expect = 7e-40
Identities = 69/327 (21%), Positives = 106/327 (32%), Gaps = 80/327 (24%)
Query: 643 PKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAM 702
+PP + +R LG G G+V A+K +
Sbjct: 5 KPLQGPPAPPGTPTPPPGGKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVI 64
Query: 703 DKGVMLNRNK----------------------------------TKTHVCLITDY-CPGG 727
+ +L + T+ L+ + P
Sbjct: 65 PRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQ 124
Query: 728 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL-QGNGHVSLT 786
+LF + + L E R + +VV A+++ H +G+++RD+K EN+L+ G L
Sbjct: 125 DLFDYITEK--GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLI 182
Query: 787 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA 846
DF L + F GT Y PE I+
Sbjct: 183 DFGSGALL--HDEPY---------------------------TDFDGTRVYSPPEWISRH 213
Query: 847 G-HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMY 905
H W+LGILLY+M+ G PF IL +L FP+ S L+
Sbjct: 214 QYHALPATVWSLGILLYDMVCGDIPFERDQE------ILEAELHFPAH--VSPDCCALIR 265
Query: 906 RLLHRDPKSRLGSHEGANEIKKHPFFK 932
R L P SR EI P+ +
Sbjct: 266 RCLAPKPSSRP----SLEEILLDPWMQ 288
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 147 bits (372), Expect = 4e-39
Identities = 69/333 (20%), Positives = 113/333 (33%), Gaps = 78/333 (23%)
Query: 638 SKVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYF 697
S +V H A + ++ ++ LGSG GSV+
Sbjct: 12 SGLVPRGSHMAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 71
Query: 698 AMKAMDKGVMLNRNK--------------------------------TKTHVCLITDYC- 724
A+K ++K + + + LI +
Sbjct: 72 AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 131
Query: 725 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHV 783
P +LF + + L+E+ R + +V+ A+ + H G+++RD+K EN+L+ N G +
Sbjct: 132 PVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 189
Query: 784 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII 843
L DF L K + F GT Y PE I
Sbjct: 190 KLIDFGSGALL--KDTVY---------------------------TDFDGTRVYSPPEWI 220
Query: 844 AGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQ 902
H + W+LGILLY+M+ G PF I+ + F + +
Sbjct: 221 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQRVSSE--CQH 272
Query: 903 LMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935
L+ L P R EI+ HP+ + V
Sbjct: 273 LIRWCLALRPSDRPTFE----EIQNHPWMQDVL 301
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 148 bits (376), Expect = 1e-38
Identities = 55/305 (18%), Positives = 103/305 (33%), Gaps = 63/305 (20%)
Query: 661 DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK-------- 712
S + F P LG G G++ + + A+K + ++
Sbjct: 16 TSVVIVGKISFCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRILPECFSFADREVQLLRES 74
Query: 713 --------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALE 758
+ + + C L ++ Q + L
Sbjct: 75 DEHPNVIRYFCTEKDRQFQYIAIELC-AATLQEYVE-QKDFAHLGLEPITLLQQTTSGLA 132
Query: 759 YLHCQGIIYRDLKPENVLLQGNGH-----VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 813
+LH I++RDLKP N+L+ ++DF L K+
Sbjct: 133 HLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLC-----------------KKLAV 175
Query: 814 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEML-YGYT 869
G+ + + GTE +IAPE+++ T VD ++ G + Y ++ G
Sbjct: 176 GRHSFSRR-------SGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSH 228
Query: 870 PFRGKTRQKTFANILHKDLKFPSSTPT-SLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928
PF +++ + L + A++L+ +++ DP+ R A + KH
Sbjct: 229 PFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRP----SAKHVLKH 284
Query: 929 PFFKG 933
PFF
Sbjct: 285 PFFWS 289
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 149 bits (378), Expect = 2e-37
Identities = 65/323 (20%), Positives = 110/323 (34%), Gaps = 89/323 (27%)
Query: 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------- 707
+ + LG+G G V +G+ A+K + +
Sbjct: 15 PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV 74
Query: 708 ---------LNRNKTKTHVCLITDYCPGGELF-LLLDRQPTKVLKEDAVRFYAAEVVVAL 757
L + L +YC GG+L L + LKE +R +++ AL
Sbjct: 75 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL 134
Query: 758 EYLHCQGIIYRDLKPENVLLQGNGHVS---LTDFDLSCLTSCKPQLLLPTTNEKKRRHKG 814
YLH II+RDLKPEN++LQ + D + L
Sbjct: 135 RYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYA--KELDQGELCTE---------- 182
Query: 815 QQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 874
FVGT +Y+APE++ +T VD+W+ G L +E + G+ PF
Sbjct: 183 ----------------FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 226
Query: 875 TRQKTFANILHK--------------DLKFPSSTPTSLH--------AKQLMYRLLHRDP 912
+ + + + +KF S PT H ++ + +L
Sbjct: 227 WQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQ 286
Query: 913 KSRLGSHEGANEIKKHPFFKGVN 935
+ R + F+ ++
Sbjct: 287 RQRGTDP----QNPNVGCFQALD 305
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 4e-36
Identities = 64/329 (19%), Positives = 116/329 (35%), Gaps = 84/329 (25%)
Query: 660 LDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------LNR 710
+ + EQ K LG G +G+V G+ A+K M L
Sbjct: 6 IPNFEQSLKNLVVSEKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIALMEIKLLTE 64
Query: 711 N-------------KTKTHVCLITDYCPGGELFLLLDR-----QPTKVLKEDAVRFYAAE 752
+ T + + + C L L++ + K+ KE +
Sbjct: 65 SDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQ 123
Query: 753 VVVALEYLHCQGIIYRDLKPENVLL-------------QGNGHVSLTDFDLSCLTSCKPQ 799
+ + +LH II+RDLKP+N+L+ N + ++DF L
Sbjct: 124 IASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC-------- 175
Query: 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-------TSAV 852
K+ GQ + N+ GT + APE++ + + T ++
Sbjct: 176 ---------KKLDSGQSS------FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSI 220
Query: 853 DWWALGILLYEML-YGYTPFRGKTRQKTFANILHKDLKFPSSTPT-----SLHAKQLMYR 906
D +++G + Y +L G PF K ++ +NI+ A L+ +
Sbjct: 221 DIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQ 278
Query: 907 LLHRDPKSRLGSHEGANEIKKHPFFKGVN 935
++ DP R A ++ +HP F +
Sbjct: 279 MIDHDPLKRP----TAMKVLRHPLFWPKS 303
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 3e-35
Identities = 58/295 (19%), Positives = 92/295 (31%), Gaps = 92/295 (31%)
Query: 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR------------------------ 710
+ LG G G V + + + FA+K + R
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENL 83
Query: 711 NKTKTHVCLITDYCPGGELFLLLDR---QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIY 767
+ + ++ + GGELF R + + E + A++YLH I +
Sbjct: 84 YAGRKCLLIVMECLDGGELF---SRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 140
Query: 768 RDLKPENVLLQ---GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEP 824
RD+KPEN+L N + LTDF
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDFGF---------------------------------- 166
Query: 825 MRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT----F 880
A E + + D W+LG+++Y +L GY PF
Sbjct: 167 --------------AKETTGE-KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK 211
Query: 881 ANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933
I +FP+ + S K L+ LL +P R+ E HP+
Sbjct: 212 TRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM----TITEFMNHPWIMQ 262
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 1e-34
Identities = 49/300 (16%), Positives = 96/300 (32%), Gaps = 60/300 (20%)
Query: 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK--------------- 712
F ++ +GSG+ GSV G +A+K K + + ++
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 713 ------------TKTHVCLITDYCPGGELFLLLD--RQPTKVLKEDAVRFYAAEVVVALE 758
H+ + +YC GG L + + KE ++ +V L
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 129
Query: 759 YLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK----G 814
Y+H +++ D+KP N+ + + + +++ K G
Sbjct: 130 YIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMF----------KIGDLG 179
Query: 815 QQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 873
+ + G ++A E++ H D +AL + + R
Sbjct: 180 ------HVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRN 233
Query: 874 KTRQKTFANILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
+ I L + P S +L+ ++H DP+ R A + KH
Sbjct: 234 G---DQWHEIRQGRLPRIPQV--LSQEFTELLKVMIHPDPERRP----SAMALVKHSVLL 284
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 8e-34
Identities = 60/320 (18%), Positives = 111/320 (34%), Gaps = 49/320 (15%)
Query: 634 WANHSKVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGS 693
+ + + P+ + K +D + + +G G G VH ++ +
Sbjct: 23 GSAKLQRLGPETEDNEGVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQT 82
Query: 694 GQYFAMKAMDKGVMLNR-------------------NKTKTHVCLITDYCPGGELFLLLD 734
G A+K + V + V + + GG L L+
Sbjct: 83 GFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI- 141
Query: 735 RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCL 793
+ L ED +Y + + LEYLH + I++ D+K +NVLL +G +L DF +
Sbjct: 142 -KQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHA-- 198
Query: 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVD 853
P + + + + GTE ++APE++ G + VD
Sbjct: 199 --------------------LCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVD 238
Query: 854 WWALGILLYEMLYGYTPFRGKTRQKTFANILHKD-LKFPSSTPTSLHAKQLMYRLLHRDP 912
W+ ++ ML G P+ R I + + Q + L ++P
Sbjct: 239 IWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEP 298
Query: 913 KSRLGSHEGANEIKKHPFFK 932
R A E+++
Sbjct: 299 VHRA----SAMELRRKVGKA 314
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 3e-30
Identities = 58/277 (20%), Positives = 98/277 (35%), Gaps = 43/277 (15%)
Query: 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK------------- 712
+ LG G G V +G+ MK + + +
Sbjct: 7 FRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEH 66
Query: 713 ----------TKT-HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH 761
K + IT+Y GG L ++ ++ V F A ++ + YLH
Sbjct: 67 PNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSF-AKDIASGMAYLH 125
Query: 762 CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFM 821
II+RDL N L++ N +V + DF L+ L+ + + + P
Sbjct: 126 SMNIIHRDLNSHNCLVRENKNVVVADFGLAR--------LMVDEKTQPEGLRSLKKPDR- 176
Query: 822 AEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT-RQKTF 880
+ + VG ++APE+I G + VD ++ GI+L E++ R F
Sbjct: 177 ----KKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF 232
Query: 881 ANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+ D P + P S + R DP+ R
Sbjct: 233 GLNVRGFLDRYCPPNCPPSFF--PITVRCCDLDPEKR 267
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 1e-29
Identities = 43/205 (20%), Positives = 79/205 (38%), Gaps = 34/205 (16%)
Query: 716 HVCLITDYCPGGELF-LLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKP 772
++ ++T+Y G L+ LL + L E A +V + YLH + I++R+LK
Sbjct: 108 NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKS 167
Query: 773 ENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFV 832
N+L+ V + DF LS A +S S
Sbjct: 168 PNLLVDKKYTVKVCDFGLSR---------------------------LKASTFLSSKSAA 200
Query: 833 GTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK--F 890
GT E++APE++ D ++ G++L+E+ P+ + A + K +
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEI 260
Query: 891 PSSTPTSLHAKQLMYRLLHRDPKSR 915
P + + ++ +P R
Sbjct: 261 PRNLNPQV--AAIIEGCWTNEPWKR 283
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 1e-29
Identities = 53/291 (18%), Positives = 101/291 (34%), Gaps = 72/291 (24%)
Query: 677 LGSGDTGSVHLVELCGSGQYFAMKAMD------------------------------KGV 706
+G G +V+ + A +
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDS 93
Query: 707 MLNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG-- 764
+ K K + L+T+ G L L R KV+K +R + +++ L++LH +
Sbjct: 94 WESTVKGKKCIVLVTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPP 151
Query: 765 IIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAE 823
II+RDLK +N+ + G G V + D L+ L
Sbjct: 152 IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-------------------------- 185
Query: 824 PMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883
+ + +GT E++APE+ + +VD +A G+ + EM P+
Sbjct: 186 ---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRR 241
Query: 884 LHKDLKFPSSTP--TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
+ +K P+S K+++ + ++ R ++ H FF+
Sbjct: 242 VTSGVK-PASFDKVAIPEVKEIIEGCIRQNKDERY----SIKDLLNHAFFQ 287
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 2e-29
Identities = 55/282 (19%), Positives = 98/282 (34%), Gaps = 62/282 (21%)
Query: 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK--------- 712
S I+ + + +G G G V + + A+K ++
Sbjct: 1 SLHMIDYKEIEVEEVVGRGAFGVVCKAKWRA--KDVAIKQIESESERKAFIVELRQLSRV 58
Query: 713 -----------TKTHVCLITDYCPGGELF-LLLDRQPTKVLKEDAVRFYAAEVVVALEYL 760
VCL+ +Y GG L+ +L +P + + + YL
Sbjct: 59 NHPNIVKLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 118
Query: 761 HC---QGIIYRDLKPENVLLQGNGHVS-LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQ 816
H + +I+RDLKP N+LL G V + DF +C
Sbjct: 119 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC------------------------ 154
Query: 817 NPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG-KT 875
+ M + G+ ++APE+ G+ ++ D ++ GI+L+E++ PF
Sbjct: 155 ---DIQTHM---TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGG 208
Query: 876 RQKTFANILHKDL--KFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+H + P + + LM R +DP R
Sbjct: 209 PAFRIMWAVHNGTRPPLIKNLPKPI--ESLMTRCWSKDPSQR 248
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 2e-29
Identities = 48/212 (22%), Positives = 80/212 (37%), Gaps = 37/212 (17%)
Query: 713 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKP 772
T + ++T +C G L+ L TK + + A + ++YLH + II+RDLK
Sbjct: 90 TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDI-ARQTARGMDYLHAKSIIHRDLKS 148
Query: 773 ENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFV 832
N+ L + V + DF L+ S
Sbjct: 149 NNIFLHEDNTVKIGDFGLATEKS-------------------------RWSGSHQFEQLS 183
Query: 833 GTEEYIAPEIIAGAGH---TSAVDWWALGILLYEMLYGYTPFRGKT-RQKTFANILHKDL 888
G+ ++APE+I + D +A GI+LYE++ G P+ R + + L
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
Query: 889 K-----FPSSTPTSLHAKQLMYRLLHRDPKSR 915
S+ P + K+LM L + R
Sbjct: 244 SPDLSKVRSNCPKRM--KRLMAECLKKKRDER 273
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 7e-28
Identities = 66/285 (23%), Positives = 108/285 (37%), Gaps = 60/285 (21%)
Query: 677 LGSGDTGSVHLVELCGSGQYFAMK-----------AMDKGVMLNRN-------------K 712
LG G G V+ + A+K + + + L+++
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 713 TKTHVCLITDYCPGGELFLLLDRQPTKV-LKEDAVRFYAAEVVVALEYLHCQGIIYRDLK 771
+ + + PGG L LL + + E + FY +++ L+YLH I++RD+K
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIK 149
Query: 772 PENVLL-QGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNS 830
+NVL+ +G + ++DF S KR +A + +
Sbjct: 150 GDNVLINTYSGVLKISDFGTS-----------------KR----------LAGINPCTET 182
Query: 831 FVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLYGYTPFRG-KTRQKTFANILHKD 887
F GT +Y+APEII G+ A D W+LG + EM G PF Q +
Sbjct: 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK 242
Query: 888 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
+ S AK + + DP R AN++ F K
Sbjct: 243 VHPEIPESMSAEAKAFILKCFEPDPDKRA----CANDLLVDEFLK 283
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 1e-27
Identities = 51/292 (17%), Positives = 94/292 (32%), Gaps = 75/292 (25%)
Query: 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKTKTHV-------- 717
+ K +G G G VH L A+K++ G +
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 718 ---------------------CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVA 756
++ ++ P G+L+ L + + +R ++ +
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRL-MLDIALG 134
Query: 757 LEYLHCQG--IIYRDLKPENVLL-----QGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 809
+EY+ Q I++RDL+ N+ L + DF LS +
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSV-------------- 180
Query: 810 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--HTSAVDWWALGILLYEMLYG 867
+ + +G +++APE I +T D ++ ++LY +L G
Sbjct: 181 ----------------HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
Query: 868 YTPFRGKTRQK--TFANILHKDL--KFPSSTPTSLHAKQLMYRLLHRDPKSR 915
PF + K I + L P P L + ++ DPK R
Sbjct: 225 EGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRL--RNVIELCWSGDPKKR 274
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 2e-27
Identities = 33/207 (15%), Positives = 69/207 (33%), Gaps = 41/207 (19%)
Query: 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPE 773
H LIT + P G L+ +L V+ + +A ++ + +LH I L
Sbjct: 83 HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSR 142
Query: 774 NVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVG 833
+V++ + ++ D+ +
Sbjct: 143 SVMIDEDMTARISMADVKFSFQSP--------------------------------GRMY 170
Query: 834 TEEYIAPEIIAGAG---HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDL-- 888
++APE + + + D W+ +LL+E++ PF + + + + L
Sbjct: 171 APAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRP 230
Query: 889 KFPSSTPTSLHAKQLMYRLLHRDPKSR 915
P + +LM ++ DP R
Sbjct: 231 TIPPGISPHV--SKLMKICMNEDPAKR 255
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 3e-27
Identities = 46/212 (21%), Positives = 80/212 (37%), Gaps = 39/212 (18%)
Query: 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 775
H+ +IT C G L+ ++ R VL + R A E+V + YLH +GI+++DLK +NV
Sbjct: 103 HLAIITSLCKGRTLYSVV-RDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNV 161
Query: 776 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTE 835
NG V +TDF L + + + + G
Sbjct: 162 FY-DNGKVVITDFGLFSI---------------SGVLQAGRREDKLRIQ-------NGWL 198
Query: 836 EYIAPEIIAGAG---------HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 886
++APEII + D +ALG + YE+ PF+ + + +
Sbjct: 199 CHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQM-GT 257
Query: 887 DLKF---PSSTPTSLHAKQLMYRLLHRDPKSR 915
+K + ++ + + R
Sbjct: 258 GMKPNLSQIGMGKEI--SDILLFCWAFEQEER 287
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 3e-27
Identities = 67/291 (23%), Positives = 118/291 (40%), Gaps = 63/291 (21%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMD------KGVMLN----------RNK 712
+ + + +G G +G+V+ +GQ A++ M+ K +++N N
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 713 TKTHVC--------LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG 764
++ +Y GG L ++ + E + E + ALE+LH
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC---MDEGQIAAVCRECLQALEFLHSNQ 136
Query: 765 IIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEP 824
+I+RD+K +N+LL +G V LTDF Q+ T E+ +R
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCA------QI----TPEQSKR------------- 173
Query: 825 MRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANIL 884
++ VGT ++APE++ + VD W+LGI+ EM+ G P+ + + I
Sbjct: 174 ----STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA 229
Query: 885 HKD---LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
L+ P + + R L D + R A E+ +H F K
Sbjct: 230 TNGTPELQNPEKLSAIF--RDFLNRCLEMDVEKR----GSAKELLQHQFLK 274
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 3e-27
Identities = 66/316 (20%), Positives = 107/316 (33%), Gaps = 81/316 (25%)
Query: 659 ILDSGEQ---INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKTK- 714
L G Q + + +GSG G V + +G A+K M + NK +
Sbjct: 12 YLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMR----RSGNKEEN 67
Query: 715 -----------------------------THVCLITDYCPGGELFLLLDRQPTKVLKEDA 745
T V + + L ++ + E
Sbjct: 68 KRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTC--AEKLKKRMQGPIPERI 125
Query: 746 VRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLS-CLTSCKPQLLLP 803
+ +V AL YL + G+I+RD+KP N+LL G + L DF +S L
Sbjct: 126 LGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD-------- 177
Query: 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII-----AGAGHTSAVDWWALG 858
+A + G Y+APE I + D W+LG
Sbjct: 178 ---------------------DKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLG 216
Query: 859 ILLYEMLYGYTPFRG-KTRQKTFANILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRL 916
I L E+ G P++ KT + +L ++ P S + + L +D + R
Sbjct: 217 ISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRP 276
Query: 917 GSHEGANEIKKHPFFK 932
N++ +H F K
Sbjct: 277 ----KYNKLLEHSFIK 288
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 9e-27
Identities = 61/298 (20%), Positives = 107/298 (35%), Gaps = 60/298 (20%)
Query: 649 DSPPWKAIQKILDSGE---QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKG 705
D K ++ L + ++ F I LG+G+ G V V SG A K +
Sbjct: 10 DEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE 69
Query: 706 V-------------MLNRNK------------TKTHVCLITDYCPGGELFLLLDRQPTKV 740
+ +L+ + + + ++ GG L +L +
Sbjct: 70 IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGR 127
Query: 741 LKEDAVRFYAAEVVVALEYLHCQG-IIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799
+ E + + V+ L YL + I++RD+KP N+L+ G + L DF +S
Sbjct: 128 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS-------- 179
Query: 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGI 859
GQ + + M NSFVGT Y++PE + G ++ D W++G+
Sbjct: 180 --------------GQ-----LIDSMA--NSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 218
Query: 860 LLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLG 917
L EM G P ++ + + TP D + +
Sbjct: 219 SLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMA 276
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 1e-26
Identities = 72/291 (24%), Positives = 122/291 (41%), Gaps = 63/291 (21%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMD------KGVMLN----------RNK 712
+G G TG V L SG+ A+K MD + ++ N N
Sbjct: 45 LLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNV 104
Query: 713 TKTHVC--------LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG 764
+ + ++ ++ GG L ++ + L E+ + V+ AL YLH QG
Sbjct: 105 VEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR---LNEEQIATVCEAVLQALAYLHAQG 161
Query: 765 IIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEP 824
+I+RD+K +++LL +G V L+DF Q+ + + +R
Sbjct: 162 VIHRDIKSDSILLTLDGRVKLSDFGFCA------QI----SKDVPKR------------- 198
Query: 825 MRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANIL 884
S VGT ++APE+I+ + + + VD W+LGI++ EM+ G P+ + + +
Sbjct: 199 ----KSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLR 254
Query: 885 HKD---LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
LK L + + R+L RDP+ R A E+ HPF
Sbjct: 255 DSPPPKLKNSHKVSPVL--RDFLERMLVRDPQER----ATAQELLDHPFLL 299
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 1e-26
Identities = 52/213 (24%), Positives = 85/213 (39%), Gaps = 47/213 (22%)
Query: 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG---IIYRDLKP 772
++CL+ ++ GG L +L + + D + +A ++ + YLH + II+RDLK
Sbjct: 80 NLCLVMEFARGGPLNRVLSGKR---IPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKS 136
Query: 773 ENVLL--------QGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEP 824
N+L+ N + +TDF L+
Sbjct: 137 SNILILQKVENGDLSNKILKITDFGLAREWHRT--------------------------- 169
Query: 825 MRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANIL 884
S G ++APE+I + + D W+ G+LL+E+L G PFRG +
Sbjct: 170 --TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVA 227
Query: 885 HKD--LKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
L PS+ P +LM + DP SR
Sbjct: 228 MNKLALPIPSTCPEPF--AKLMEDCWNPDPHSR 258
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 2e-26
Identities = 71/312 (22%), Positives = 123/312 (39%), Gaps = 60/312 (19%)
Query: 647 RKDSPPWKAIQKILDSGEQIN-LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDK- 704
+ +PP + ++K+ + + F ++ LG G GSV+ +GQ A+K +
Sbjct: 6 QLRNPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE 65
Query: 705 ----------GVMLN---RNKTKTHVC--------LITDYCPGGELFLLLDRQPTKVLKE 743
+M + K + ++ +YC G + ++ + K L E
Sbjct: 66 SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN-KTLTE 124
Query: 744 DAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803
D + + LEYLH I+RD+K N+LL GH L DF ++ QL
Sbjct: 125 DEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAG------QL--- 175
Query: 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE 863
T+ +R N+ +GT ++APE+I G+ D W+LGI E
Sbjct: 176 -TDTMAKR-----------------NTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIE 217
Query: 864 MLYGYTPFRGKTRQKTFANILHKD---LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 920
M G P+ + I + P S + + + L + P+ R
Sbjct: 218 MAEGKPPYADIHPMRAIFMIPTNPPPTFRKPEL--WSDNFTDFVKQCLVKSPEQRA---- 271
Query: 921 GANEIKKHPFFK 932
A ++ +HPF +
Sbjct: 272 TATQLLQHPFVR 283
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 2e-26
Identities = 64/301 (21%), Positives = 108/301 (35%), Gaps = 65/301 (21%)
Query: 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMK--------------AMDKGVMLNR 710
++ PI LG G G V + SGQ A+K MD + +
Sbjct: 3 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRT 62
Query: 711 NK------------TKTHVCLITDYCPGG-ELFLLLDRQPTKVLKEDAVRFYAAEVVVAL 757
+ V + + + F + + ED + A +V AL
Sbjct: 63 VDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKAL 122
Query: 758 EYLHCQG-IIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQ 816
E+LH + +I+RD+KP NVL+ G V + DF +S G
Sbjct: 123 EHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS----------------------GY- 159
Query: 817 NPVFMAEPMRASNSFVGTEEYIAPEIIAG----AGHTSAVDWWALGILLYEMLYGYTPFR 872
+ + + A + G + Y+APE I G++ D W+LGI + E+ P+
Sbjct: 160 ----LVDDV-AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD 214
Query: 873 G-KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
T + ++ + + S + L ++ K R E+ +HPFF
Sbjct: 215 SWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERP----TYPELMQHPFF 270
Query: 932 K 932
Sbjct: 271 T 271
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 2e-26
Identities = 71/312 (22%), Positives = 114/312 (36%), Gaps = 76/312 (24%)
Query: 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKT------------ 713
IN + + +GSG T V + A+K ++ L + +T
Sbjct: 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN----LEKCQTSMDELLKEIQAM 67
Query: 714 -----------------KTHVCLITDYCPGGELFLLL------DRQPTKVLKEDAVRFYA 750
K + L+ GG + ++ + VL E +
Sbjct: 68 SQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATIL 127
Query: 751 AEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS-CLTSCKPQLLLPTTNEKK 809
EV+ LEYLH G I+RD+K N+LL +G V + DF +S L + T K
Sbjct: 128 REVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATG-----GDITRNKV 182
Query: 810 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEMLYGY 868
R +FVGT ++APE++ G+ D W+ GI E+ G
Sbjct: 183 R------------------KTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGA 224
Query: 869 TPFRGKTRQKTFANILHKD---LKFPSSTPTSLHA-----KQLMYRLLHRDPKSRLGSHE 920
P+ K L D L+ L ++++ L +DP+ R
Sbjct: 225 APYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRP---- 280
Query: 921 GANEIKKHPFFK 932
A E+ +H FF+
Sbjct: 281 TAAELLRHKFFQ 292
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 2e-26
Identities = 71/306 (23%), Positives = 113/306 (36%), Gaps = 80/306 (26%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMD------------------------- 703
F ++ +G+G G V+ +GQ A+K MD
Sbjct: 24 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNI 83
Query: 704 ---KGVMLNRNKTKTHVCL--ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALE 758
G + +N L + ++C G + L+ LKE+ + + E++ L
Sbjct: 84 ATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLS 143
Query: 759 YLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNP 818
+LH +I+RD+K +NVLL N V L DF +S QL RR
Sbjct: 144 HLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSA------QL----DRTVGRR------- 186
Query: 819 VFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRG 873
N+F+GT ++APE+IA A + D W+LGI EM G P
Sbjct: 187 ----------NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD 236
Query: 874 KTRQKTFANILHKDLKFPSSTPTSLHAKQL-------MYRLLHRDPKSRLGSHEGANEIK 926
+ I P + L +K+ + L ++ R ++
Sbjct: 237 MHPMRALFLI-------PRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRP----ATEQLM 285
Query: 927 KHPFFK 932
KHPF +
Sbjct: 286 KHPFIR 291
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 2e-26
Identities = 73/294 (24%), Positives = 115/294 (39%), Gaps = 70/294 (23%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDK--------------GVML---NRN 711
+ F ++ +G G G V + + A+K +D V+ +
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 712 KTKTHVC--------LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ 763
TK + +I +Y GG LL+ L E + E++ L+YLH +
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSE 138
Query: 764 GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAE 823
I+RD+K NVLL +G V L DF ++ QL T+ + +R
Sbjct: 139 KKIHRDIKAANVLLSEHGEVKLADFGVAG------QL----TDTQIKR------------ 176
Query: 824 PMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883
N+FVGT ++APE+I + + S D W+LGI E+ G P K I
Sbjct: 177 -----NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 231
Query: 884 LHKDLKFPSSTPT-----SLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
+ PT S K+ + L+++P R A E+ KH F
Sbjct: 232 PKNN------PPTLEGNYSKPLKEFVEACLNKEPSFRP----TAKELLKHKFIL 275
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 6e-25
Identities = 62/305 (20%), Positives = 97/305 (31%), Gaps = 69/305 (22%)
Query: 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK------------ 712
+ + + +G G GSV+ + SGQ A+K + V K
Sbjct: 18 DFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRS 77
Query: 713 --------------TKTHVCLITDYCPGGELFLLLD--RQPTKVLKEDAVRFYAAEVVVA 756
+ + + V+ E+ + V A
Sbjct: 78 SDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKA 137
Query: 757 LEYLHCQG-IIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQ 815
L +L II+RD+KP N+LL +G++ L DF +S QL + +
Sbjct: 138 LNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS------GQL----VDSIAKTR--- 184
Query: 816 QNPVFMAEPMRASNSFVGTEEYIAPEIIAG----AGHTSAVDWWALGILLYEMLYGYTPF 871
G Y+APE I G+ D W+LGI LYE+ G P+
Sbjct: 185 ---------------DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPY 229
Query: 872 RG-KTRQKTFANILHKD---LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927
+ ++ D L S + L +D R E+ K
Sbjct: 230 PKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRP----KYKELLK 285
Query: 928 HPFFK 932
HPF
Sbjct: 286 HPFIL 290
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 106 bits (265), Expect = 1e-24
Identities = 55/365 (15%), Positives = 115/365 (31%), Gaps = 103/365 (28%)
Query: 642 HPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSG--DTGSVHLVELCGSGQYFAM 699
H H ++ ++ + L G + + +G G D +V+L +G+Y +
Sbjct: 3 HHHHHHMENLYFQGMSSFLPEGG-----CYELLTVIGKGFEDLMTVNLARYKPTGEYVTV 57
Query: 700 KAMD------KGV--------MLNRNK------------TKTHVCLITDYCPGGELFLLL 733
+ ++ + V + + ++T + G L+
Sbjct: 58 RRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLI 117
Query: 734 DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793
+ E A+ + V+ AL+Y+H G ++R +K ++L+ +G V L+ +
Sbjct: 118 CTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNL- 176
Query: 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA--GAGHTSA 851
+ + +R+ P V +++PE++ G+ +
Sbjct: 177 -----SM----ISHGQRQRVVHDFP----------KYSVKVLPWLSPEVLQQNLQGYDAK 217
Query: 852 VDWWALGILLYEMLYGYTPF---------------------------------------- 871
D +++GI E+ G+ PF
Sbjct: 218 SDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVA 277
Query: 872 ----RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927
T P S H + + L R+P +R A+ +
Sbjct: 278 NSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARP----SASTLLN 333
Query: 928 HPFFK 932
H FFK
Sbjct: 334 HSFFK 338
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 2e-24
Identities = 63/298 (21%), Positives = 115/298 (38%), Gaps = 66/298 (22%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDK-------------GVMLN---RNK 712
+ + + LG G G V+ + +G A K ++ ++
Sbjct: 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI 78
Query: 713 TKTHVC--------LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG 764
K ++ ++CPGG + ++ + L E ++ +++ AL +LH +
Sbjct: 79 VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSKR 137
Query: 765 IIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEP 824
II+RDLK NVL+ G + L DF +S + ++R
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSA------KN----LKTLQKR------------- 174
Query: 825 MRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879
+SF+GT ++APE++ + D W+LGI L EM P +
Sbjct: 175 ----DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV 230
Query: 880 FANILHKD---LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934
I D L PS S+ + + L ++P++R A ++ +HPF +
Sbjct: 231 LLKIAKSDPPTLLTPSK--WSVEFRDFLKIALDKNPETRP----SAAQLLEHPFVSSI 282
|
| >3ewk_A Sensor protein; PAS domain, alpha/beta fold, kinase, phosphoprotein, transfe flavoprotein; HET: FAD; 2.34A {Methylococcus capsulatus} Length = 227 | Back alignment and structure |
|---|
Score = 98.6 bits (246), Expect = 3e-23
Identities = 27/101 (26%), Positives = 51/101 (50%)
Query: 208 TKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRL 267
T I+YA+ F ++ Y +E+VG++ R + + + T+ G + G
Sbjct: 5 TDLQGRILYANDNFCAVSRYGREELVGQDHRIVNSGYHGKAYIRDMWRTISRGNIWQGEF 64
Query: 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTE 308
N +KDGT +W TI P+ D+ GK ++I ++ +++ E
Sbjct: 65 CNRRKDGTRYWVDSTIVPLMDNAGKPRQYISIRRDITAQKE 105
|
| >3ewk_A Sensor protein; PAS domain, alpha/beta fold, kinase, phosphoprotein, transfe flavoprotein; HET: FAD; 2.34A {Methylococcus capsulatus} Length = 227 | Back alignment and structure |
|---|
Score = 97.9 bits (244), Expect = 5e-23
Identities = 37/186 (19%), Positives = 75/186 (40%), Gaps = 15/186 (8%)
Query: 486 VITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD 545
ITD I++A+D+F ++ Y REE++G++ R + A +R + I
Sbjct: 3 SITDL---QGRILYANDNFCAVSRYGREELVGQDHRIVNSGYHGKAYIRDMWRTISRGNI 59
Query: 546 VTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSE------HLEPLRNSIPE 599
+ N K G ++W + P+ D G+ + +I ++ D + L L+ ++
Sbjct: 60 WQGEFCNRRKDGTRYWVDSTIVPLMDNAGKPRQYISIRRDITAQKEAEAQLARLKQAMDA 119
Query: 600 ATAEESEKLVKQTAENVNEAVKELPDANLTPEDLW-ANHSKVVHPKPHRKDSPPWKAIQK 658
+ N A+ + + +L + S + P D A+Q+
Sbjct: 120 NSEMILLTDRAGRIIYANPALCRF--SGMAEGELLGQSPSILDSP---LADQETLAAMQE 174
Query: 659 ILDSGE 664
L +G+
Sbjct: 175 ALQAGQ 180
|
| >3ewk_A Sensor protein; PAS domain, alpha/beta fold, kinase, phosphoprotein, transfe flavoprotein; HET: FAD; 2.34A {Methylococcus capsulatus} Length = 227 | Back alignment and structure |
|---|
Score = 95.2 bits (237), Expect = 4e-22
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 208 TKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRL 267
T I+YA+ + +G E++G++ L D E +A ++E LQ GQ + GRL
Sbjct: 127 TDRAGRIIYANPALCRFSGMAEGELLGQSPSILDSPLADQETLAAMQEALQAGQPWSGRL 186
Query: 268 LNYKK------DGTPFWNLLTIAPIKDDEGKVLKFIGMQ 300
LN ++ D +W ++ PI D ++ ++ +Q
Sbjct: 187 LNRRRTGPAPHDAEDYWAEISTTPIHTDGNGLVGYVQIQ 225
|
| >3ewk_A Sensor protein; PAS domain, alpha/beta fold, kinase, phosphoprotein, transfe flavoprotein; HET: FAD; 2.34A {Methylococcus capsulatus} Length = 227 | Back alignment and structure |
|---|
Score = 87.1 bits (216), Expect = 3e-19
Identities = 21/128 (16%), Positives = 53/128 (41%), Gaps = 9/128 (7%)
Query: 464 RQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFL 523
+++ + L ++ + ++TD II+A+ + + + E+LG++ L
Sbjct: 103 QKEAEAQLARLKQAMDANSEMILLTDR---AGRIIYANPALCRFSGMAEGELLGQSPSIL 159
Query: 524 QGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKK------FWNLFHLQPMRDQKGEVQ 577
P D T+ ++ A+ + +L+N ++G +W P+ +
Sbjct: 160 DSPLADQETLAAMQEALQAGQPWSGRLLNRRRTGPAPHDAEDYWAEISTTPIHTDGNGLV 219
Query: 578 YFIGVQLD 585
++ +Q D
Sbjct: 220 GYVQIQHD 227
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 104 bits (260), Expect = 5e-23
Identities = 41/176 (23%), Positives = 63/176 (35%), Gaps = 42/176 (23%)
Query: 743 EDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802
+A+ Y E++ AL YLH G++Y DLKPEN++L + L D
Sbjct: 182 AEAIA-YLLEILPALSYLHSIGLVYNDLKPENIMLTEEQ-LKLIDLGA------------ 227
Query: 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 862
+ + GT + APEI+ G T A D + +G L
Sbjct: 228 -------------------VSRINSFGYLYGTPGFQAPEIVRT-GPTVATDIYTVGRTLA 267
Query: 863 EMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS 918
+ G+ L +D T S L+ R + DP+ R +
Sbjct: 268 ALTLDLPTRNGRYVDG-----LPEDDPVL-KTYDSYGR--LLRRAIDPDPRQRFTT 315
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 98.5 bits (246), Expect = 1e-22
Identities = 45/227 (19%), Positives = 89/227 (39%), Gaps = 58/227 (25%)
Query: 743 EDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802
+ A+ F +++ +++ H I++RD+KP+N+L+ N + + DF ++ S
Sbjct: 111 DTAINF-TNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS------- 162
Query: 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 862
+ +N +GT +Y +PE G D +++GI+LY
Sbjct: 163 -------------------ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLY 203
Query: 863 EMLYGYTPFRGKT------RQKTFANILHKDLKFPSST-----PTSLHAKQLMYRLLHRD 911
EML G PF G+T + + + ++ P SL ++ R +D
Sbjct: 204 EMLVGEPPFNGETAVSIAIKH------IQDSVPNVTTDVRKDIPQSLSN--VILRATEKD 255
Query: 912 PKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDTEK 958
+R + E+K L ++ + ++ D K
Sbjct: 256 KANRYKT---IQEMKD---------DLSSVLHENRANEDVYELDKMK 290
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 97.3 bits (243), Expect = 4e-22
Identities = 55/246 (22%), Positives = 98/246 (39%), Gaps = 56/246 (22%)
Query: 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 782
Y G L ++ + + A+ AL + H GII+RD+KP N+++
Sbjct: 97 YVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA 154
Query: 783 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEI 842
V + DF ++ R + + + +GT +Y++PE
Sbjct: 155 VKVMDFGIA-------------------RAIADS-----GNSVTQTAAVIGTAQYLSPEQ 190
Query: 843 IAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT------RQKTFANILHKDLKFPSST-- 894
G + D ++LG +LYE+L G PF G + + + +D PS+
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH------VREDPIPPSARHE 244
Query: 895 --PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLF 952
L A ++ + L ++P++R + A E++ LVR N +AP
Sbjct: 245 GLSADLDA--VVLKALAKNPENRYQT---AAEMRA---------DLVRVHNGEPPEAPKV 290
Query: 953 ATDTEK 958
TD E+
Sbjct: 291 LTDAER 296
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 96.9 bits (242), Expect = 5e-22
Identities = 42/178 (23%), Positives = 76/178 (42%), Gaps = 30/178 (16%)
Query: 743 EDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802
AV ++ AL+ H G +RD+KPEN+L+ + L DF ++ T+
Sbjct: 134 PRAVA-IVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATT------- 185
Query: 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 862
E + + VGT Y+APE + + T D +AL +LY
Sbjct: 186 -------------------DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLY 226
Query: 863 EMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAK--QLMYRLLHRDPKSRLGS 918
E L G P++G A+ +++ + PS+ + ++ R + ++P+ R +
Sbjct: 227 ECLTGSPPYQGDQLSVMGAH-INQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVT 283
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 97.1 bits (242), Expect = 9e-22
Identities = 62/332 (18%), Positives = 104/332 (31%), Gaps = 91/332 (27%)
Query: 642 HPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKA 701
P R S + ++ + + F ++ +G G G+V+ + + A+K
Sbjct: 29 MPAGGRAGSLKDPDVAELFFKDD--PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKK 86
Query: 702 MDKGVMLNRNKTKTHVCLIT-------------------------------DYCPGGELF 730
M + ++ I +YC G
Sbjct: 87 MS----YSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASD 142
Query: 731 LLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 790
LL + K L+E + + L YLH +I+RD+K N+LL G V L DF
Sbjct: 143 LLEVHK--KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGS 200
Query: 791 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AG 847
+ + NSFVGT ++APE+I
Sbjct: 201 AS------IM-------APA------------------NSFVGTPYWMAPEVILAMDEGQ 229
Query: 848 HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQL---- 903
+ VD W+LGI E+ P +I + +L +
Sbjct: 230 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI-------AQNESPALQSGHWSEYF 282
Query: 904 ---MYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
+ L + P+ R + + KH F
Sbjct: 283 RNFVDSCLQKIPQDRP----TSEVLLKHRFVL 310
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 95.6 bits (238), Expect = 3e-21
Identities = 54/257 (21%), Positives = 95/257 (36%), Gaps = 64/257 (24%)
Query: 705 GVMLNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ- 763
N T T + L++DY G LF L+R V E ++ A L +LH +
Sbjct: 103 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV--EGMIKL-ALSTASGLAHLHMEI 159
Query: 764 -------GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQ 816
I +RDLK +N+L++ NG + D L+ RH
Sbjct: 160 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA------------------VRHDSAT 201
Query: 817 NPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS------AVDWWALGILLYEMLYGYT- 869
+ + + A N VGT+ Y+APE++ + + D +A+G++ +E+ +
Sbjct: 202 DTIDI-----APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSI 256
Query: 870 ---------PFRGKT-RQKTFANI----LHKDL--KFPS---STPTSLHAKQLMYRLLHR 910
P+ + + + L P+ S ++M +
Sbjct: 257 GGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYA 316
Query: 911 DPKSRLGSHEGANEIKK 927
+ +RL A IKK
Sbjct: 317 NGAARL----TALRIKK 329
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 93.6 bits (233), Expect = 7e-21
Identities = 56/260 (21%), Positives = 91/260 (35%), Gaps = 70/260 (26%)
Query: 705 GVMLNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ- 763
+ + T + LIT Y G L+ L +R + L +LH +
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDT--VSCLRI-VLSIASGLAHLHIEI 125
Query: 764 -------GIIYRDLKPENVLLQGNGHVSLTDFDLSCL-TSCKPQLLLPTTNEKKRRHKGQ 815
I +RDLK +N+L++ NG + D L+ + + QL +
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR-------- 177
Query: 816 QNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSA------VDWWALGILLYEMLYGYT 869
VGT+ Y+APE++ VD WA G++L+E+
Sbjct: 178 ----------------VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMV 221
Query: 870 ----------PFRGKT-RQKTFANI----LHKDL--KFPSS-----TPTSLHAKQLMYRL 907
PF +F ++ P+ T TSL +LM
Sbjct: 222 SNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSL--AKLMKEC 279
Query: 908 LHRDPKSRLGSHEGANEIKK 927
+++P +RL A IKK
Sbjct: 280 WYQNPSARL----TALRIKK 295
|
| >2gj3_A Nitrogen fixation regulatory protein; PAS domain, FAD, redox sensor, atomic resolution, transferase; HET: FAD; 1.04A {Azotobacter vinelandii} Length = 120 | Back alignment and structure |
|---|
Score = 87.9 bits (219), Expect = 8e-21
Identities = 29/92 (31%), Positives = 51/92 (55%)
Query: 214 IMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKD 273
I+YA+ F +TGY S+EV+G+N L T + L + + G L+N +KD
Sbjct: 27 ILYANRAFRTITGYGSEEVLGKNESILSNGTTPRLVYQALWGRLAQKKPWSGVLVNRRKD 86
Query: 274 GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSK 305
T + LT+AP+ ++ G+ + ++GM + S+
Sbjct: 87 KTLYLAELTVAPVLNEAGETIYYLGMHRDTSE 118
|
| >2gj3_A Nitrogen fixation regulatory protein; PAS domain, FAD, redox sensor, atomic resolution, transferase; HET: FAD; 1.04A {Azotobacter vinelandii} Length = 120 | Back alignment and structure |
|---|
Score = 74.1 bits (183), Expect = 5e-16
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
Query: 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATV 533
T+E ITD I++A+ +F +T Y EE+LG+N L T
Sbjct: 7 FRQTVEHAPIAISITDL---KANILYANRAFRTITGYGSEEVLGKNESILSNGTTPRLVY 63
Query: 534 RKIRAAIDNQTDV-TVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSE 588
+ + + Q + L+N K + + P+ ++ GE Y++G+ D SE
Sbjct: 64 QALWGRL-AQKKPWSGVLVNRRKDKTLYLAELTVAPVLNEAGETIYYLGMHRDTSE 118
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 93.6 bits (233), Expect = 1e-20
Identities = 50/257 (19%), Positives = 92/257 (35%), Gaps = 60/257 (23%)
Query: 705 GVMLNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ- 763
+ + T + LITDY G L+ L + + ++ A V L +LH +
Sbjct: 98 AADIKGTGSWTQLYLITDYHENGSLYDYLKSTT--LDAKSMLKL-AYSSVSGLCHLHTEI 154
Query: 764 -------GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQ 816
I +RDLK +N+L++ NG + D L+ +
Sbjct: 155 FSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA------------------VKFISDT 196
Query: 817 NPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS------AVDWWALGILLYEMLYGYT- 869
N V + N+ VGT+ Y+ PE++ + + + D ++ G++L+E+
Sbjct: 197 NEVDI-----PPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVS 251
Query: 870 ---------PFRGKT-RQKTFANI----LHKDL-----KFPSSTPTSLHAKQLMYRLLHR 910
P+ ++ ++ K L SS +LM
Sbjct: 252 GGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAH 311
Query: 911 DPKSRLGSHEGANEIKK 927
+P SRL + + K
Sbjct: 312 NPASRLTALRVKKTLAK 328
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397 | Back alignment and structure |
|---|
Score = 93.8 bits (233), Expect = 2e-20
Identities = 37/192 (19%), Positives = 70/192 (36%), Gaps = 23/192 (11%)
Query: 715 THVCLITDYCPGGE-LFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKP 772
TH+C++ + G L + + + L V+ +V+ L+YLH + II+ D+KP
Sbjct: 118 THICMVFE--VLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKP 175
Query: 773 ENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRAS---- 828
EN+LL N + + V EP A
Sbjct: 176 ENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKV 235
Query: 829 ---------------NSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 873
+ T +Y + E++ G+G+ + D W+ + +E+ G F
Sbjct: 236 KIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEP 295
Query: 874 KTRQKTFANILH 885
+ ++ + H
Sbjct: 296 HSGEEYTRDEDH 307
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 90.7 bits (226), Expect = 6e-20
Identities = 53/252 (21%), Positives = 89/252 (35%), Gaps = 58/252 (23%)
Query: 706 VMLNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGI 765
+R + V L+ ++ +L LD+ P L + ++ + + L++LH I
Sbjct: 83 CATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCI 141
Query: 766 IYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPM 825
++RDLKPEN+L+ G V L DF L+ R M
Sbjct: 142 VHRDLKPENILVTSGGTVKLADFGLA-------------------RIYS--------YQM 174
Query: 826 RASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH 885
+ V T Y APE++ + + + VD W++G + EM F G + I
Sbjct: 175 ALTPVVV-TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFD 233
Query: 886 ----------------KDLKFPSSTPTSL---------HAKQLMYRLLHRDPKSRLGSHE 920
FP P + QL+ +L +P R+
Sbjct: 234 LIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRI---- 289
Query: 921 GANEIKKHPFFK 932
A +H +
Sbjct: 290 SAFRALQHSYLH 301
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326 | Back alignment and structure |
|---|
Score = 89.6 bits (223), Expect = 2e-19
Identities = 56/280 (20%), Positives = 105/280 (37%), Gaps = 64/280 (22%)
Query: 706 VMLNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGI 765
++R +T + L+ ++ +L LD+ P + + ++ +++ L++LH +
Sbjct: 83 CTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRV 141
Query: 766 IYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPM 825
++RDLKP+N+L+ +G + L DF L+ R M
Sbjct: 142 VHRDLKPQNILVTSSGQIKLADFGLA-------------------RIYS--------FQM 174
Query: 826 RASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH 885
++ V T Y APE++ + + + VD W++G + EM FRG + IL
Sbjct: 175 ALTSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILD 233
Query: 886 ----------------KDLKFPSSTPTSL---------HAKQLMYRLLHRDPKSRLGSHE 920
F S + + K L+ + L +P R+
Sbjct: 234 VIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRI---- 289
Query: 921 GANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDTEKEY 960
A HP+F+ + LD+ L + E
Sbjct: 290 SAYSALSHPYFQDLE------RCKENLDSHLPPSQNTSEL 323
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 89.9 bits (223), Expect = 2e-19
Identities = 53/251 (21%), Positives = 86/251 (34%), Gaps = 68/251 (27%)
Query: 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKG--------------VMLN-R 710
++L + + ++ +G G G+V+ L + A+K ++
Sbjct: 10 LDLDNLKLLELIGRGRYGAVYKGSLDE--RPVAVKVFSFANRQNFINEKNIYRVPLMEHD 67
Query: 711 N-------------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVAL 757
N + L+ +Y P G L L + A V L
Sbjct: 68 NIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGL 124
Query: 758 EYLHCQ---------GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEK 808
YLH + I +RDL NVL++ +G ++DF LS
Sbjct: 125 AYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR--------------- 169
Query: 809 KRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-------GHTSAVDWWALGILL 861
V E A+ S VGT Y+APE++ GA VD +ALG++
Sbjct: 170 ----LTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIY 225
Query: 862 YEMLYGYTPFR 872
+E+ T
Sbjct: 226 WEIFMRCTDLF 236
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373 | Back alignment and structure |
|---|
Score = 90.2 bits (224), Expect = 2e-19
Identities = 51/319 (15%), Positives = 98/319 (30%), Gaps = 101/319 (31%)
Query: 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKTKTHVCLITDYCPGG 727
LQ G+ H+++L + + HV ++ + G
Sbjct: 69 LQRVNDADNTKEDSMGANHILKLLDHFNH-------------KGPNGVHVVMVFEVL-GE 114
Query: 728 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLL------QGN 780
L L+ + + + V+ + ++++ L+Y+H + GII+ D+KPENVL+ +
Sbjct: 115 NLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENL 174
Query: 781 GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAP 840
+ + D +C + + + T EY +P
Sbjct: 175 IQIKIADLGNACWYD--------------EHY----------------TNSIQTREYRSP 204
Query: 841 EIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH--------------- 885
E++ GA D W+ L++E++ G F + H
Sbjct: 205 EVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYL 264
Query: 886 ---------------KDLKFPSSTPTSLH-------------AKQ---LMYRLLHRDPKS 914
L AK+ + +L DP+
Sbjct: 265 LRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRK 324
Query: 915 RLGSHEGANEIKKHPFFKG 933
R A + HP+ K
Sbjct: 325 RA----DAGGLVNHPWLKD 339
|
| >3lyx_A Sensory BOX/ggdef domain protein; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Colwellia psychrerythraea} Length = 124 | Back alignment and structure |
|---|
Score = 83.3 bits (207), Expect = 3e-19
Identities = 16/86 (18%), Positives = 37/86 (43%)
Query: 214 IMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKD 273
I+ + G + GY+ ++ +G+ L G +++ ++N + G + KD
Sbjct: 29 IIDWNKGSETLYGYSKEQAIGQPVNMLHVPGDTEHITSEVISAVENQGKWTGEIRMLHKD 88
Query: 274 GTPFWNLLTIAPIKDDEGKVLKFIGM 299
G W PI + +++ +G+
Sbjct: 89 GHIGWIESMCVPIYGENYQMVGALGI 114
|
| >3lyx_A Sensory BOX/ggdef domain protein; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Colwellia psychrerythraea} Length = 124 | Back alignment and structure |
|---|
Score = 77.5 bits (192), Expect = 3e-17
Identities = 22/103 (21%), Positives = 43/103 (41%), Gaps = 3/103 (2%)
Query: 486 VITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD 545
V+TD II + L YS+E+ +G+ L P ++ +A++NQ
Sbjct: 21 VVTDL---QGFIIDWNKGSETLYGYSKEQAIGQPVNMLHVPGDTEHITSEVISAVENQGK 77
Query: 546 VTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSE 588
T ++ K G W P+ + ++ +G+ D ++
Sbjct: 78 WTGEIRMLHKDGHIGWIESMCVPIYGENYQMVGALGINRDITK 120
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 87.9 bits (218), Expect = 7e-19
Identities = 51/315 (16%), Positives = 93/315 (29%), Gaps = 93/315 (29%)
Query: 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDK-------------------- 704
+ ++ G G V +L +Y A+K
Sbjct: 20 YFQSMPLQLLEVKARGRFGCVWKAQLLN--EYVAVKIFPIQDKQSWQNEYEVYSLPGMKH 77
Query: 705 -------GVMLNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVAL 757
G + LIT + G L L + + + A + L
Sbjct: 78 ENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANV---VSWNELCHIAETMARGL 134
Query: 758 EYLHCQ----------GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 807
YLH I +RD+K +NVLL+ N + DF L+
Sbjct: 135 AYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA---------------- 178
Query: 808 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSA-----VDWWALGILLY 862
+ + ++ + VGT Y+APE++ GA + +D +A+G++L+
Sbjct: 179 --LKFEAGKSAGDT-------HGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLW 229
Query: 863 EMLYGYTPFRGKT------------RQKTFANIL------HKDLKFPSSTPTSLHAK--- 901
E+ T G + + ++ K
Sbjct: 230 ELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLC 289
Query: 902 QLMYRLLHRDPKSRL 916
+ + D ++RL
Sbjct: 290 ETIEECWDHDAEARL 304
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 2e-17
Identities = 78/354 (22%), Positives = 125/354 (35%), Gaps = 93/354 (26%)
Query: 639 KVVHPKPHRKDSPPWKAIQKILDSGEQINLQ---HFRPIKPLGSGDTGSVHLVELCGSGQ 695
+D K + G+ + + K +G+G G V+ +LC SG+
Sbjct: 21 SAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGE 80
Query: 696 YFAMK-----AMDKG--------------VML-------NRNKTKTHVCLITDYCPGGEL 729
A+K K V L K + ++ L+ DY P +
Sbjct: 81 LVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TV 139
Query: 730 FLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLT 786
+ + + L V+ Y ++ +L Y+H GI +RD+KP+N+LL + + L
Sbjct: 140 YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLC 199
Query: 787 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA 846
DF + + L+ EP S++ + Y APE+I GA
Sbjct: 200 DFGSA-------KQLVRG------------------EPNV---SYICSRYYRAPELIFGA 231
Query: 847 GH-TSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANIL-----------------HKDL 888
TS++D W+ G +L E+L G F G + I+ + +
Sbjct: 232 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF 291
Query: 889 KFPSSTPTSLH----------AKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
KFP A L RLL P +RL E H FF
Sbjct: 292 KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL----TPLEACAHSFFD 341
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 3e-17
Identities = 55/254 (21%), Positives = 91/254 (35%), Gaps = 63/254 (24%)
Query: 712 KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLK 771
+ K + L+ +YC + LDR + + E V+ + + A+ + H I+RD+K
Sbjct: 72 RRKRRLHLVFEYCDH-TVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVK 129
Query: 772 PENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSF 831
PEN+L+ + + L DF + R + + E
Sbjct: 130 PENILITKHSVIKLCDFGFA-------------------RLLTGPSDYYDDE-------- 162
Query: 832 VGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTR----QKTF------ 880
V T Y +PE++ G VD WA+G + E+L G + GK+
Sbjct: 163 VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDL 222
Query: 881 ---------ANILHKDLKFPSSTPT----------SLHAKQLMYRLLHRDPKSRLGSHEG 921
N +K P S A L+ LH DP RL
Sbjct: 223 IPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERL----T 278
Query: 922 ANEIKKHPFFKGVN 935
++ HP+F+ +
Sbjct: 279 CEQLLHHPYFENIR 292
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 83.8 bits (208), Expect = 3e-17
Identities = 57/314 (18%), Positives = 111/314 (35%), Gaps = 58/314 (18%)
Query: 629 TPEDLWANHSKVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLV 688
+ L + P + +A+ K D +N + + +G G+ G V
Sbjct: 77 SIPLLIDHLLSTQQPLTKKSGVVLHRAVPK--DKWV-LNHEDLVLGEQIGRGNFGEVFSG 133
Query: 689 ELCGSGQYFAMKAMDKGVMLNRN----------KTKTH--------VC-------LITDY 723
L A+K+ + + + K +H VC ++ +
Sbjct: 134 RLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMEL 193
Query: 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHV 783
GG+ L + ++ + ++ + +EYL + I+RDL N L+ +
Sbjct: 194 VQGGDFLTFLRTEGARLRVKTLLQM-VGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVL 252
Query: 784 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII 843
++DF +S + +Q PV ++ APE +
Sbjct: 253 KISDFGMSREEA---------DGVYAASGGLRQVPV----------------KWTAPEAL 287
Query: 844 AGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILHKD-LKFPSSTPTSLHAK 901
++S D W+ GILL+E G +P+ + Q+T + L P P ++
Sbjct: 288 NYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVF-- 345
Query: 902 QLMYRLLHRDPKSR 915
+LM + +P R
Sbjct: 346 RLMEQCWAYEPGQR 359
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 3e-17
Identities = 62/291 (21%), Positives = 110/291 (37%), Gaps = 70/291 (24%)
Query: 713 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKP 772
T+ + L+ +Y +L LD + V+ + +++ L Y H Q +++RDLKP
Sbjct: 71 TEKSLTLVFEYLDK-DLKQYLDDCGNI-INMHNVKLFLFQLLRGLAYCHRQKVLHRDLKP 128
Query: 773 ENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFV 832
+N+L+ G + L DF L+ R K P + ++ V
Sbjct: 129 QNLLINERGELKLADFGLA-------------------RAKS--------IPTKTYDNEV 161
Query: 833 GTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTR----QKTFANIL--- 884
T Y P+I+ G+ ++ +D W +G + YEM G F G T F IL
Sbjct: 162 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIF-RILGTP 220
Query: 885 -------------HKDLKFPSSTPTSL---------HAKQLMYRLLHRDPKSRLGSHEGA 922
K +P +L L+ +LL + ++R+ A
Sbjct: 221 TEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRI----SA 276
Query: 923 NEIKKHPFFKGVNWALVRCMNPPELDAPLFATDTEKEYKVVDPGMQDLQQN 973
+ KHPFF +L ++ +FA + K + ++ +
Sbjct: 277 EDAMKHPFF----LSLGERIHKLPDTTSIFALKEIQLQK--EASLRSAHHH 321
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 3e-17
Identities = 60/270 (22%), Positives = 92/270 (34%), Gaps = 66/270 (24%)
Query: 712 KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLK 771
K K L+ ++ + L+ P L V+ Y +++ + + H II+RD+K
Sbjct: 94 KKKKRWYLVFEFVDH-TILDDLELFPNG-LDYQVVQKYLFQIINGIGFCHSHNIIHRDIK 151
Query: 772 PENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSF 831
PEN+L+ +G V L DF + R V+ E
Sbjct: 152 PENILVSQSGVVKLCDFGFA-------------------RTLAAPGEVYDDE-------- 184
Query: 832 VGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH----- 885
V T Y APE++ G AVD WA+G L+ EM G F G + +I+
Sbjct: 185 VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNL 244
Query: 886 --------------KDLKFPSSTPT----------SLHAKQLMYRLLHRDPKSRLGSHEG 921
++ P S L + LH DP R
Sbjct: 245 IPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRP----F 300
Query: 922 ANEIKKHPFFKGVNWALVRCMNPPELDAPL 951
E+ H FF+ + EL +
Sbjct: 301 CAELLHHDFFQMDGF---AERFSQELQLKV 327
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 82.2 bits (204), Expect = 4e-17
Identities = 54/252 (21%), Positives = 99/252 (39%), Gaps = 63/252 (25%)
Query: 713 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKP 772
TK + L+ ++ +L LLD L+ + + +++ + Y H + +++RDLKP
Sbjct: 71 TKKRLVLVFEHLDQ-DLKKLLDVCEGG-LESVTAKSFLLQLLNGIAYCHDRRVLHRDLKP 128
Query: 773 ENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFV 832
+N+L+ G + + DF L+ R G P+R +
Sbjct: 129 QNLLINREGELKIADFGLA-------------------RAFG--------IPVRKYTHEI 161
Query: 833 GTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTR----QKTFANIL--- 884
T Y AP+++ G+ ++ +D W++G + EM+ G F G + + F IL
Sbjct: 162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIF-RILGTP 220
Query: 885 -------HKDL-----KFPSSTPTSL---------HAKQLMYRLLHRDPKSRLGSHEGAN 923
+L F P L+ ++L DP R+ A
Sbjct: 221 NSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRI----TAK 276
Query: 924 EIKKHPFFKGVN 935
+ +H +FK N
Sbjct: 277 QALEHAYFKENN 288
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 82.2 bits (204), Expect = 5e-17
Identities = 57/253 (22%), Positives = 103/253 (40%), Gaps = 64/253 (25%)
Query: 713 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKP 772
++ + L+ ++ +L +LD T L++ ++ Y +++ + + H I++RDLKP
Sbjct: 90 SERCLTLVFEFMEK-DLKKVLDENKTG-LQDSQIKIYLYQLLRGVAHCHQHRILHRDLKP 147
Query: 773 ENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFV 832
+N+L+ +G + L DF L+ R G P+R+ V
Sbjct: 148 QNLLINSDGALKLADFGLA-------------------RAFG--------IPVRSYTHEV 180
Query: 833 GTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTR----QKTFANIL--- 884
T Y AP+++ G+ +++VD W++G + EM+ G F G T K F +IL
Sbjct: 181 VTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIF-SILGTP 239
Query: 885 -------------HKDLKFPSSTPTSL---------HAKQLMYRLLHRDPKSRLGSHEGA 922
K F L+ +L DP R+ A
Sbjct: 240 NPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRI----SA 295
Query: 923 NEIKKHPFFKGVN 935
+ HP+FK ++
Sbjct: 296 RDAMNHPYFKDLD 308
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 7e-17
Identities = 50/230 (21%), Positives = 87/230 (37%), Gaps = 58/230 (25%)
Query: 738 TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797
T++L +D ++++ + + A++ LH +I+RDLKP N+L+ N + + DF L+ +
Sbjct: 106 TQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID-- 163
Query: 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWA 856
+ M E FV T Y APE++ + + A+D W+
Sbjct: 164 --------ESAADNSEPTGQQSGMVE-------FVATRWYRAPEVMLTSAKYSRAMDVWS 208
Query: 857 LGILLYEMLYGYTPFRGK----------------TRQKTFANIL---------------H 885
G +L E+ F G+ I
Sbjct: 209 CGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPA 268
Query: 886 KDLK--FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933
L+ FP P + L+ R+L DP R+ A E +HP+ +
Sbjct: 269 APLEKMFPRVNPKGID---LLQRMLVFDPAKRI----TAKEALEHPYLQT 311
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 8e-17
Identities = 59/351 (16%), Positives = 115/351 (32%), Gaps = 91/351 (25%)
Query: 642 HPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMK- 700
H H + + + + + + +G G G V + A+K
Sbjct: 1 HHHHHHMAAAAAAGPEMVRGQVFDV-GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKK 59
Query: 701 --AMDKGVMLNRN-------KTKTH---VCLITDYCPGG-----ELFLLLDRQPT----- 738
+ R H + + +++++ D T
Sbjct: 60 ISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKL 119
Query: 739 ---KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795
+ L D + ++ +++ L+Y+H +++RDLKP N+LL + + DF L+ +
Sbjct: 120 LKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179
Query: 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDW 854
+ F+ E +V T Y APEI+ + T ++D
Sbjct: 180 -----------------PDHDHTGFLTE-------YVATRWYRAPEIMLNSKGYTKSIDI 215
Query: 855 WALGILLYEMLYGYTPFRGKTRQKTFANILH----------------------------- 885
W++G +L EML F GK +IL
Sbjct: 216 WSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKN 275
Query: 886 -KDLK--FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933
FP++ +L L+ ++L +P R+ + HP+ +
Sbjct: 276 KVPWNRLFPNADSKALD---LLDKMLTFNPHKRI----EVEQALAHPYLEQ 319
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388 | Back alignment and structure |
|---|
Score = 81.3 bits (201), Expect = 2e-16
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 9/139 (6%)
Query: 738 TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS-CLTSC 796
+L+ ++ +++ ++YLH G+++RD+KP N+LL HV + DF LS +
Sbjct: 103 ANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNI 162
Query: 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWW 855
+ + + + + + +V T Y APEI+ G+ T +D W
Sbjct: 163 RRVTNNIPLSINENTENFDDDQPILTD-------YVATRWYRAPEILLGSTKYTKGIDMW 215
Query: 856 ALGILLYEMLYGYTPFRGK 874
+LG +L E+L G F G
Sbjct: 216 SLGCILGEILCGKPIFPGS 234
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 3e-16
Identities = 81/366 (22%), Positives = 134/366 (36%), Gaps = 93/366 (25%)
Query: 644 KPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMK--- 700
P + K + +GEQ + + K +G+G G V +L S + A+K
Sbjct: 16 NPLDDPNKVIKVLASDGKTGEQREIA-YTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVL 73
Query: 701 --AMDKG--------------VML-------NRNKTKTHVCLITDYCPGGELFLLLD--R 735
K V L K + + L+ +Y P ++
Sbjct: 74 QDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYA 132
Query: 736 QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLT 794
+ + + ++ Y +++ +L Y+H GI +RD+KP+N+LL G + L DF +
Sbjct: 133 KLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSA--- 189
Query: 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVD 853
+ + S++ + Y APE+I GA + T+ +D
Sbjct: 190 ----------------KI---------LIAGEPNVSYICSRYYRAPELIFGATNYTTNID 224
Query: 854 WWALGILLYEMLYGYTPFRGKT-----------------RQKTFANILHKDLKFPSSTPT 896
W+ G ++ E++ G F G++ Q N + + KFP P
Sbjct: 225 IWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPH 284
Query: 897 SLH----------AKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPE 946
A L+ RLL P +RL A E HPFF + R N E
Sbjct: 285 PFSKVFRPRTPPDAIDLISRLLEYTPSARL----TAIEALCHPFFDELRTGEARMPNGRE 340
Query: 947 LDAPLF 952
L PLF
Sbjct: 341 LP-PLF 345
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 4e-16
Identities = 44/233 (18%), Positives = 82/233 (35%), Gaps = 69/233 (29%)
Query: 735 RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 794
V+ ++++ +++ L LH G+++RDL P N+LL N +++ DF+L+
Sbjct: 125 HDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA--- 181
Query: 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVD 853
R +V Y APE++ T VD
Sbjct: 182 ----------------REDTADA--NKTH-------YVTHRWYRAPELVMQFKGFTKLVD 216
Query: 854 WWALGILLYEMLYGYTPFRGKTRQKTFANILH---------------------------- 885
W+ G ++ EM FRG T I+
Sbjct: 217 MWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSN 276
Query: 886 ---KDLK--FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933
+ P++ P +L L+ ++L +P+ R+ + +HP+F+
Sbjct: 277 VPARAWTAVVPTADPVALD---LIAKMLEFNPQRRI----STEQALRHPYFES 322
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 79.6 bits (197), Expect = 4e-16
Identities = 62/319 (19%), Positives = 117/319 (36%), Gaps = 83/319 (26%)
Query: 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYF----AMKAMDKGVMLNRNK------- 712
+ F+ IK LGSG G+V+ G+ A+K + + NK
Sbjct: 10 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 713 -----------------TKTHVCLITDYCPGGEL--FLLLDRQPTKVLKEDAVRFYAAEV 753
+ V LIT P G L ++ R+ + + + ++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQI 126
Query: 754 VVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 813
+ YL + +++RDL NVL++ HV +TDF L+ +LL EK+ +
Sbjct: 127 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA-------KLL--GAEEKEYHAE 177
Query: 814 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFR 872
G + P+ +++A E I +T D W+ G+ ++E++ +G P+
Sbjct: 178 GGKVPI----------------KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
Query: 873 GKTRQKTFANI-----LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927
G + + + L + P ++ +M + D SR
Sbjct: 222 GIPASEISSILEKGERLPQ----PPICTIDVY--MIMRKCWMIDADSR------------ 263
Query: 928 HPFFKGVNWALVRCMNPPE 946
P F+ + + P+
Sbjct: 264 -PKFRELIIEFSKMARDPQ 281
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 78.8 bits (195), Expect = 6e-16
Identities = 53/257 (20%), Positives = 100/257 (38%), Gaps = 69/257 (26%)
Query: 713 TKTHVCLITDYCPGGELFLLLDRQPTKV----LKEDAVRFYAAEVVVALEYLHCQGIIYR 768
T+ + L+ ++ +L +D + L+ + V+++ +++ L + H I++R
Sbjct: 74 TENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHR 132
Query: 769 DLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRAS 828
DLKP+N+L+ G + L DF L+ R G P+
Sbjct: 133 DLKPQNLLINKRGQLKLGDFGLA-------------------RAFG--------IPVNTF 165
Query: 829 NSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKT------------ 875
+S V T Y AP+++ G+ ++++D W+ G +L EM+ G F G
Sbjct: 166 SSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIM 225
Query: 876 --------------------RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
Q+ L + L+ + P + ++ LL +P R
Sbjct: 226 GTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMR 285
Query: 916 LGSHEGANEIKKHPFFK 932
L A + HP+F
Sbjct: 286 L----SAKQALHHPWFA 298
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 9e-16
Identities = 54/232 (23%), Positives = 88/232 (37%), Gaps = 73/232 (31%)
Query: 735 RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 794
E+ +++ +++ L+Y+H G+++RDLKP N+ + + + + DF L+
Sbjct: 120 GLK---FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA--- 173
Query: 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVD 853
RH + M +V T Y APE+I H VD
Sbjct: 174 ----------------RHADAE----MTG-------YVVTRWYRAPEVILSWMHYNQTVD 206
Query: 854 WWALGILLYEMLYGYTPFRGKTRQKTFANILH---------------------------- 885
W++G ++ EML G T F+GK IL
Sbjct: 207 IWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQT 266
Query: 886 --KDLK--FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933
KD FP ++P + L+ ++L D RL A + HPFF+
Sbjct: 267 PRKDFTQLFPRASPQAAD---LLEKMLELDVDKRL----TAAQALTHPFFEP 311
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 1e-15
Identities = 50/228 (21%), Positives = 82/228 (35%), Gaps = 70/228 (30%)
Query: 738 TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797
+ L +D V+F +++ L+Y+H II+RDLKP N+ + + + + DF L+
Sbjct: 126 CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------ 179
Query: 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWA 856
RH M +V T Y APEI+ H VD W+
Sbjct: 180 -------------RHTAD----EMTG-------YVATRWYRAPEIMLNWMHYNQTVDIWS 215
Query: 857 LGILLYEMLYGYTPFRGKTRQKTFANILH------------------------------K 886
+G ++ E+L G T F G IL
Sbjct: 216 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKM 275
Query: 887 DLK--FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
+ F + P ++ L+ ++L D R+ A + H +F
Sbjct: 276 NFANVFIGANPLAVD---LLEKMLVLDSDKRI----TAAQALAHAYFA 316
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371 | Back alignment and structure |
|---|
Score = 78.6 bits (194), Expect = 1e-15
Identities = 47/239 (19%), Positives = 84/239 (35%), Gaps = 75/239 (31%)
Query: 735 RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 794
+ L + + + +++ +++LH GII+RDLKP N++++ + + + DF L+
Sbjct: 121 QME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA--- 174
Query: 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 854
+ M +V T Y APE+I G G+ VD
Sbjct: 175 ------------------RTAGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDI 209
Query: 855 WALGILLYEMLYGYTPFRGK-------------------------------------TRQ 877
W++G ++ EM+ G F G
Sbjct: 210 WSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAG 269
Query: 878 KTFANILHKDLKFPSSTPTSLHAKQ---LMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933
+F + L S L A Q L+ ++L D R+ +E +HP+
Sbjct: 270 YSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRI----SVDEALQHPYINV 324
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458 | Back alignment and structure |
|---|
Score = 79.5 bits (196), Expect = 2e-15
Identities = 45/226 (19%), Positives = 79/226 (34%), Gaps = 21/226 (9%)
Query: 741 LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800
L E ++ ++V ++Y+H GI++RDLKP N L+ + V + DF L+
Sbjct: 153 LTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENG 212
Query: 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGI 859
+ R V T Y APE+I + T A+D W++G
Sbjct: 213 NSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGC 272
Query: 860 LLYEMLYGYTP-----------FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQL--MYR 906
+ E+L F G + F + T + QL ++
Sbjct: 273 IFAELLNMIKENVAYHADRGPLFPGSS---CFPLSPDQKAGNDFKFHTRGNRDQLNVIFN 329
Query: 907 LL---HRDPKSRLGSHEGANEIKKHPFFKGVNWA-LVRCMNPPELD 948
+L + L + I+ P +G + A + +
Sbjct: 330 ILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIH 375
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464 | Back alignment and structure |
|---|
Score = 79.1 bits (195), Expect = 2e-15
Identities = 47/239 (19%), Positives = 85/239 (35%), Gaps = 75/239 (31%)
Query: 735 RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 794
+ L + + + +++ +++LH GII+RDLKP N++++ + + + DF L+
Sbjct: 158 QME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA--- 211
Query: 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 854
+ M +V T Y APE+I G G+ VD
Sbjct: 212 ------------------RTAGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDI 246
Query: 855 WALGILLYEMLYGYTPFRGK-------------------------------------TRQ 877
W++G ++ EM+ F G+
Sbjct: 247 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG 306
Query: 878 KTFANILHKDLKFPSSTPTSLHAKQ---LMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933
TF + L S L A Q L+ ++L DP R+ ++ +HP+
Sbjct: 307 LTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYINV 361
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 79.0 bits (195), Expect = 2e-15
Identities = 63/298 (21%), Positives = 106/298 (35%), Gaps = 55/298 (18%)
Query: 644 KPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMD 703
P K + P ++ LG G G V+ A+K +
Sbjct: 195 YPAPKRNKPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK 254
Query: 704 KGVMLNRN--------KTKTH--------VC-------LITDYCPGGELF-LLLDRQPTK 739
+ M K H VC +IT++ G L L + +
Sbjct: 255 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 314
Query: 740 VLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799
V + A ++ A+EYL + I+R+L N L+ N V + DF LS +
Sbjct: 315 VSAVVLLYM-ATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLS-------R 366
Query: 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGI 859
L+ T + H G + P+ + APE +A + D WA G+
Sbjct: 367 LM---TGDTYTAHAGAKFPIK----------------WTAPESLAYNKFSIKSDVWAFGV 407
Query: 860 LLYEML-YGYTPFRGKTRQKTFANILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
LL+E+ YG +P+ G + + + ++ P P ++ +LM +P R
Sbjct: 408 LLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY--ELMRACWQWNPSDR 463
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367 | Back alignment and structure |
|---|
Score = 77.8 bits (192), Expect = 2e-15
Identities = 52/229 (22%), Positives = 88/229 (38%), Gaps = 70/229 (30%)
Query: 738 TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797
+ L ED ++F +++ L Y+H GII+RDLKP N+ + + + + DF L+
Sbjct: 122 HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA------ 175
Query: 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWA 856
R M +V T Y APE+I T VD W+
Sbjct: 176 -------------RQADS----EMTG-------YVVTRWYRAPEVILNWMRYTQTVDIWS 211
Query: 857 LGILLYEMLYGYTPFRGKTRQKTFANILH------------------------------K 886
+G ++ EM+ G T F+G I+ K
Sbjct: 212 VGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKK 271
Query: 887 DLK--FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933
D +++P +++ L+ ++L D + R+ A E HP+F+
Sbjct: 272 DFASILTNASPLAVN---LLEKMLVLDAEQRV----TAGEALAHPYFES 313
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355 | Back alignment and structure |
|---|
Score = 77.4 bits (191), Expect = 3e-15
Identities = 57/274 (20%), Positives = 86/274 (31%), Gaps = 84/274 (30%)
Query: 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 775
H+C+ + G F L + VR A ++ AL +LH + + DLKPEN+
Sbjct: 96 HMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENI 154
Query: 776 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPV----------FMAEPM 825
L + K K +N F E
Sbjct: 155 LF------------------VNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH 196
Query: 826 RASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT---------- 875
+ V T Y PE+I G D W++G +L+E G+T F+
Sbjct: 197 ---TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEK 253
Query: 876 --------------RQKTFANILHKDLKFPSSTPTSLHAKQ------------------- 902
+QK F L + ++ + K+
Sbjct: 254 ILGPIPSHMIHRTRKQKYFY---KGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQL 310
Query: 903 --LMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934
LM R+L DP R+ E HPFF G+
Sbjct: 311 FDLMRRMLEFDPAQRI----TLAEALLHPFFAGL 340
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 76.4 bits (189), Expect = 3e-15
Identities = 52/253 (20%), Positives = 99/253 (39%), Gaps = 64/253 (25%)
Query: 713 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKP 772
+ + L+ ++C +L D L + V+ + +++ L + H + +++RDLKP
Sbjct: 72 SDKKLTLVFEFCDQ-DLKKYFDSCNGD-LDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKP 129
Query: 773 ENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFV 832
+N+L+ NG + L +F L+ R G P+R ++ V
Sbjct: 130 QNLLINRNGELKLANFGLA-------------------RAFGI--------PVRCYSAEV 162
Query: 833 GTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTP-FRGKTR----QKTFANIL-- 884
T Y P+++ GA ++++D W+ G + E+ P F G ++ F +L
Sbjct: 163 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIF-RLLGT 221
Query: 885 --------HKDL----KFPSSTPT----------SLHAKQLMYRLLHRDPKSRLGSHEGA 922
L +P T + + L+ LL +P R+ A
Sbjct: 222 PTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRI----SA 277
Query: 923 NEIKKHPFFKGVN 935
E +HP+F
Sbjct: 278 EEALQHPYFSDFC 290
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360 | Back alignment and structure |
|---|
Score = 76.6 bits (189), Expect = 6e-15
Identities = 56/272 (20%), Positives = 86/272 (31%), Gaps = 76/272 (27%)
Query: 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 775
H+CLI + G L+ ++ R + ++ Y E++ AL YL + + DLKPEN+
Sbjct: 110 HMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENI 168
Query: 776 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK-----------RRHKGQQNPVFMAEP 824
LL K Q+ + K H
Sbjct: 169 LLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH------------ 216
Query: 825 MRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG----------- 873
S + T +Y APE+I G + D W+ G +L E+ G FR
Sbjct: 217 ----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMME 272
Query: 874 ---------------KTRQKTFANILHKDLKFPSSTPTSLHAKQ---------------- 902
KT + N L +P + + K
Sbjct: 273 SIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELF 332
Query: 903 --LMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
+Y +L DP R E+ KH F +
Sbjct: 333 CDFLYSILQIDPTLRP----SPAELLKHKFLE 360
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383 | Back alignment and structure |
|---|
Score = 77.1 bits (190), Expect = 6e-15
Identities = 45/220 (20%), Positives = 85/220 (38%), Gaps = 61/220 (27%)
Query: 741 LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLTSCKPQ 799
+ + + Y ++ A+ ++H GI +RD+KP+N+L+ + L DF +
Sbjct: 138 IPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSA-------- 189
Query: 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALG 858
+ P S +++ + Y APE++ GA T ++D W++G
Sbjct: 190 -----------KK---------LIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIG 229
Query: 859 ILLYEMLYGYTPFRGKTR-----------------QKTFANILHKDLKFPSSTPTSLH-- 899
+ E++ G F G+T Q N + +++FP+
Sbjct: 230 CVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKI 289
Query: 900 --------AKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931
A L+ ++L +P R+ E HPFF
Sbjct: 290 LPEGTPSLAIDLLEQILRYEPDLRI----NPYEAMAHPFF 325
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 75.6 bits (186), Expect = 6e-15
Identities = 27/207 (13%), Positives = 47/207 (22%), Gaps = 65/207 (31%)
Query: 715 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 774
++ ++ GG L + D P+ A+R + A + H G+ P
Sbjct: 104 AGGLVVAEWIRGGSLQEVADTSPSP---VGAIR-AMQSLAAAADAAHRAGVALSIDHPSR 159
Query: 775 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGT 834
V + +G V L
Sbjct: 160 VRVSIDGDVVLAYP---------------------------------------------- 173
Query: 835 EEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSST 894
+ D +G LY +L P + A +D
Sbjct: 174 -ATMPDA-------NPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA-PAERDTAGQPIE 224
Query: 895 PTSLHAK------QLMYRLLHRDPKSR 915
P + + R + D R
Sbjct: 225 PADIDRDIPFQISAVAARSVQGDGGIR 251
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339 | Back alignment and structure |
|---|
Score = 75.8 bits (187), Expect = 9e-15
Identities = 53/271 (19%), Positives = 89/271 (32%), Gaps = 78/271 (28%)
Query: 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 775
H+C++ + G + + + D +R A ++ ++ +LH + + DLKPEN+
Sbjct: 91 HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENI 149
Query: 776 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPV----------FMAEPM 825
L + + KR + NP + E
Sbjct: 150 LF------------------VQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHH 191
Query: 826 RASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT---------- 875
++ V T Y APE+I G + D W++G +L E G+T F
Sbjct: 192 ---STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMER 248
Query: 876 --------------RQKTFANIL----------------HKDLK--FPSSTPTSLHAKQL 903
++K F + K LK S L
Sbjct: 249 ILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDL 308
Query: 904 MYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934
+ ++L DP R+ E KHPFF +
Sbjct: 309 IQKMLEYDPAKRI----TLREALKHPFFDLL 335
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429 | Back alignment and structure |
|---|
Score = 76.7 bits (189), Expect = 1e-14
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 33/162 (20%)
Query: 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 775
H+C+ + L+ L+ + + VR +A ++ L+ LH II+ DLKPEN+
Sbjct: 173 HICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENI 231
Query: 776 LLQGNGH--VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVG 833
LL+ G + + DF SC V+ +++
Sbjct: 232 LLKQQGRSGIKVIDFGSSCYEH---------------------QRVY---------TYIQ 261
Query: 834 TEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 875
+ Y APE+I GA + +D W+LG +L E+L GY G+
Sbjct: 262 SRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 75.7 bits (187), Expect = 1e-14
Identities = 66/275 (24%), Positives = 99/275 (36%), Gaps = 66/275 (24%)
Query: 713 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKP 772
K+++ L+ D+ +L +++ L ++ Y + LEYLH I++RDLKP
Sbjct: 83 HKSNISLVFDFMET-DLEVIIKDNSLV-LTPSHIKAYMLMTLQGLEYLHQHWILHRDLKP 140
Query: 773 ENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFV 832
N+LL NG + L DF L+ + G P RA V
Sbjct: 141 NNLLLDENGVLKLADFGLA-------------------KSFG--------SPNRAYTHQV 173
Query: 833 GTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTR----QKTFANIL--- 884
T Y APE++ GA VD WA+G +L E+L G + + F L
Sbjct: 174 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIF-ETLGTP 232
Query: 885 -------HKDL----KFPSSTPTSLHAK---------QLMYRLLHRDPKSRLGSHEGANE 924
L F S LH L+ L +P +R+ A +
Sbjct: 233 TEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARI----TATQ 288
Query: 925 IKKHPFFKGVNWALVRCMNPPELDAPLFATDTEKE 959
K +F +L P +T KE
Sbjct: 289 ALKMKYF----SNRPGPTPGCQLPRPNCPVETLKE 319
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432 | Back alignment and structure |
|---|
Score = 75.9 bits (187), Expect = 2e-14
Identities = 42/230 (18%), Positives = 81/230 (35%), Gaps = 37/230 (16%)
Query: 741 LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL--SCLTSCKP 798
L E+ ++ +++ ++H GII+RDLKP N LL + V + DF L + +
Sbjct: 126 LTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDT 185
Query: 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWAL 857
++ ++ + + V T Y APE+I + T ++D W+
Sbjct: 186 NIVNDLEENEEPGPHNKNLKKQLTS-------HVVTRWYRAPELILLQENYTKSIDIWST 238
Query: 858 GILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPK---- 913
G + E+L + L FP S+ L + ++ + +
Sbjct: 239 GCIFAELLNMLQSHINDPTNR-------FPL-FPGSSCFPLSPDRNSKKVHEKSNRDQLN 290
Query: 914 --------------SRLGSHEGANEIKKHPFFKGVNWA-LVRCMNPPELD 948
+ E IK P K +N ++ ++
Sbjct: 291 IIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGIN 340
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 73.8 bits (182), Expect = 3e-14
Identities = 62/332 (18%), Positives = 108/332 (32%), Gaps = 83/332 (25%)
Query: 652 PWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYF---AMKAMDKGVML 708
P +++ ++ + + L ++ LG G G V E A+K + V+
Sbjct: 7 PLQSLTCLIGE-KDLRL-----LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLS 60
Query: 709 NRNK--------------------------TKTHVCLITDYCPGGEL--FLLLDRQPTKV 740
+ ++T+ P G L L R+
Sbjct: 61 QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRL---RKHQGH 117
Query: 741 LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800
+ YA +V + YL + I+RDL N+LL V + DF L
Sbjct: 118 FLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM--------R 169
Query: 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGIL 860
LP ++ + ++ P + APE + + A D W G+
Sbjct: 170 ALPQNDDHYVMQEHRKVPF----------------AWCAPESLKTRTFSHASDTWMFGVT 213
Query: 861 LYEML-YGYTPFRGKTRQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKSRLG 917
L+EM YG P+ G + I + L P P ++ +M + P+ R
Sbjct: 214 LWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY--NVMVQCWAHKPEDR-- 269
Query: 918 SHEGANEIKKHPFFKGVNWALVRCMNPPELDA 949
P F + L+ P ++ A
Sbjct: 270 -----------PTFVALRDFLLE-AQPTDMRA 289
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360 | Back alignment and structure |
|---|
Score = 74.6 bits (184), Expect = 3e-14
Identities = 65/334 (19%), Positives = 115/334 (34%), Gaps = 105/334 (31%)
Query: 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMK-----AMDKGVMLNRN-------KTKT 715
+ F+ + G G G+V L + +G A+K + NR
Sbjct: 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFR----NRELQIMQDLAVLH 77
Query: 716 H---VCLITDYCPGGE-------LFLLLDRQPT---KVLK----------EDAVRFYAAE 752
H V L + + GE L ++++ P + + ++ + +
Sbjct: 78 HPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQ 137
Query: 753 VVVALEYLHCQ--GIIYRDLKPENVLL-QGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 809
++ ++ LH + +RD+KP NVL+ + +G + L DF +
Sbjct: 138 LIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSA------------------ 179
Query: 810 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGY 868
+ P + +++ + Y APE+I G H T+AVD W++G + EM+ G
Sbjct: 180 -K---------KLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGE 229
Query: 869 TPFRGKT-----------------RQKTFANILHKDLKFPSSTPTSLH------------ 899
FRG N H D+ +S
Sbjct: 230 PIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAK 289
Query: 900 -AKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
A L+ LL P+ R+ E HP+F
Sbjct: 290 EAYDLLSALLQYLPEERM----KPYEALCHPYFD 319
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 3e-14
Identities = 45/229 (19%), Positives = 81/229 (35%), Gaps = 64/229 (27%)
Query: 738 TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL-QGNGHVSLTDFDLSCLTSC 796
L E+ R + +++ L+Y+H +++RDLKP N+ + + + + DF L+ +
Sbjct: 114 QGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMD- 172
Query: 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWW 855
+ ++E + T+ Y +P ++ + T A+D W
Sbjct: 173 ----------------PHYSHKGHLSE-------GLVTKWYRSPRLLLSPNNYTKAIDMW 209
Query: 856 ALGILLYEMLYGYTPFRGKTRQKTFANILH-----------------------------K 886
A G + EML G T F G + IL K
Sbjct: 210 AAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHK 269
Query: 887 DLK--FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933
L P + ++ + ++L P RL A E HP+
Sbjct: 270 PLTQLLPGISREAVD---FLEQILTFSPMDRL----TAEEALSHPYMSI 311
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 3e-14
Identities = 54/235 (22%), Positives = 86/235 (36%), Gaps = 76/235 (32%)
Query: 741 LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL-QGNGHVSLTDFDLSCLTSCKPQ 799
L + +RFY E++ AL+Y H GI++RD+KP NV++ + + L D+ L
Sbjct: 127 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL--------- 177
Query: 800 LLLPTTNEKKRRHKGQQNPVFMAE---PMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWW 855
AE P + N V + + PE++ ++D W
Sbjct: 178 ----------------------AEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMW 215
Query: 856 ALGILLYEMLYGYTP-FRGK---------------------------TRQKTFANIL--- 884
+LG +L M++ P F G F +IL
Sbjct: 216 SLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRH 275
Query: 885 -HKDLK--FPSSTPTSLH--AKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934
K + S + A + +LL D +SRL A E +HP+F V
Sbjct: 276 SRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRL----TAREAMEHPYFYTV 326
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 74.4 bits (183), Expect = 5e-14
Identities = 63/314 (20%), Positives = 112/314 (35%), Gaps = 60/314 (19%)
Query: 631 EDLWANHSKVVHPKPHRKDSPPW---KAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHL 687
+ L A +SK HR + Q + +I + R LG G G V +
Sbjct: 143 QQLVAYYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWM 202
Query: 688 VELCGSGQYFAMKAMDKGVMLNRNK-----------------------TKTHVCLITDYC 724
G+ + A+K + G M + ++ + ++T+Y
Sbjct: 203 GTWNGTTR-VAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYM 260
Query: 725 PGGELF-LLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHV 783
G L L + V AA++ + Y+ ++RDL+ N+L+ N
Sbjct: 261 SKGSLLDFLKGETGKYLRLPQLVDM-AAQIASGMAYVERMNYVHRDLRAANILVGENLVC 319
Query: 784 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII 843
+ DF L+ +L+ + + +G + P+ + APE
Sbjct: 320 KVADFGLA-------RLI---EDNEYTARQGAKFPIK----------------WTAPEAA 353
Query: 844 AGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILHKD-LKFPSSTPTSLHAK 901
T D W+ GILL E+ G P+ G ++ + + P P SLH
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH-- 411
Query: 902 QLMYRLLHRDPKSR 915
LM + ++P+ R
Sbjct: 412 DLMCQCWRKEPEER 425
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 5e-14
Identities = 59/284 (20%), Positives = 110/284 (38%), Gaps = 62/284 (21%)
Query: 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYF----AMKAMDKGVMLNRNK------- 712
+ F+ IK LGSG G+V+ G+ A+K + + NK
Sbjct: 10 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 713 -----------------TKTHVCLITDYCPGGEL--FLLLDRQPTKVLKEDAVRFYAAEV 753
+ V LIT P G L ++ R+ + + + ++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQI 126
Query: 754 VVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 813
+ YL + +++RDL NVL++ HV +TDF L+ +LL EK+ +
Sbjct: 127 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA-------KLL--GAEEKEYHAE 177
Query: 814 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFR 872
G + P+ +++A E I +T D W+ G+ ++E++ +G P+
Sbjct: 178 GGKVPI----------------KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
Query: 873 GKTRQKTFANILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
G + + + + L P ++ +M + D SR
Sbjct: 222 GIPASEISSILEKGERLPQPPICTIDVY--MIMVKCWMIDADSR 263
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 75.7 bits (185), Expect = 5e-14
Identities = 112/677 (16%), Positives = 187/677 (27%), Gaps = 216/677 (31%)
Query: 192 KDALSTFQQTFV-------VSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAG 244
KD LS F+ FV V D K I+ + +E+
Sbjct: 19 KDILSVFEDAFVDNFDCKDVQDMPK---SIL------------SKEEI------------ 51
Query: 245 TDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304
+ + ++ + + RL FW LL+ K +E V KF+
Sbjct: 52 ---DHIIMSKDAVS--GTL--RL---------FWTLLS----KQEEM-VQKFVE------ 84
Query: 305 KHTEGAKDKMLRPN-GLPESLIRYDARQKEMATSSVTELVQAMKK-PRSLSE-STNRPPI 361
++LR N S I+ + RQ M T E + + ++ + +R
Sbjct: 85 --------EVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQP 136
Query: 362 IRKSEGGVEEERA-------GALGRRKS-------ENVPPPRRNSYG------GGCRTSM 401
K + E R G LG K+ + + + C +
Sbjct: 137 YLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPE 196
Query: 402 QRISEVPEKKKQKSGRRSFMGLIGRKSQSTDDHDS---FENEIIMEGDDDYESDDERPDS 458
+ + QK + I S DH S I +
Sbjct: 197 TVL-----EMLQK-----LLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENC 246
Query: 459 ---VDDKVRQKEMRKGID-----LATTLERIEKNFVITDPRLPDNPIIFASDSFLE-LTE 509
+ + V+ + + L TT + +TD + D LT
Sbjct: 247 LLVLLN-VQNAKAWNAFNLSCKILLTT-----RFKQVTDFLSAATTTHISLDHHSMTLTP 300
Query: 510 YSREEILGR--NCRFLQGPE----TDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNL 563
+ +L + +CR P T+P + I +I + G W+
Sbjct: 301 DEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESI--------------RDGLATWDN 346
Query: 564 FHLQPMRDQKGEVQYFIGVQLDGSEHLEP--LRNS------------IPEAT-------- 601
+ D+ + I L LEP R IP
Sbjct: 347 W-KHVNCDKLTTI---IESSL---NVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDV 399
Query: 602 -AEESE----KLVKQT--AENVNEAVKELPDANL----TPEDLWANHSKVVHPKPHRKDS 650
+ KL K + + E+ +P L E+ +A H +V K
Sbjct: 400 IKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTF 459
Query: 651 PPWKAIQKILDSGEQIN--LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML 708
I LD H +G HL + + M V L
Sbjct: 460 DSDDLIPPYLD-----QYFYSH------IGH------HLKN-IEHPERMTLFRM---VFL 498
Query: 709 N----RNKTKTHVCLITDYCPGGELFLLLDRQPTK--VLKEDAVRFYAAEVVVALEYLH- 761
+ K + H + G L L + K + D Y V L++L
Sbjct: 499 DFRFLEQKIR-HDSTAWN-ASGSILNTLQQLKFYKPYICDNDPK--YERLVNAILDFLPK 554
Query: 762 CQGIIYRDLKPENVLLQ 778
+ + LL+
Sbjct: 555 IEENLICS--KYTDLLR 569
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.9 bits (126), Expect = 5e-07
Identities = 86/602 (14%), Positives = 165/602 (27%), Gaps = 172/602 (28%)
Query: 437 FENEIIMEGDDDYESDDERP----DSVDDKVRQKEMRKGID-LATTL----ERIEKNFVI 487
FE+ + D D + + +D + K+ G L TL E + + FV
Sbjct: 25 FEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVE 84
Query: 488 TDPRLPDNPIIFAS------DSFLELTEYS--REEILGRNCRFLQGPETDPATVRKIRAA 539
R + + + + Y R+ + N F + + K+R A
Sbjct: 85 EVLR-INYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQA 143
Query: 540 I---DNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQ-LD-GSEHLEPLR 594
+ +V + SGK + L K + + + L+ + +
Sbjct: 144 LLELRPAKNVLID--GVLGSGK--TWVA-LDVCLSYKVQCKMDFKIFWLNLKNCN----- 193
Query: 595 NSIPEATAEESEKLVKQTAENVNEAVKELPDANLTPEDLWANHSKVVHPKPHRKDSPPWK 654
PE E +KL+ Q N + L + A +++ KP+
Sbjct: 194 --SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENC----- 246
Query: 655 AIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKTK 714
+ +L N+Q+ + C K ++ R K
Sbjct: 247 LL--VLL-----NVQNAKAWNAFNLS----------C------------KILLTTRFKQ- 276
Query: 715 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYL-HCQGIIYRDLKPE 773
+TD FL L ++ E L +DL E
Sbjct: 277 -----VTD-------FLSAATTTHISLDHHSMTLTPDE---VKSLLLKYLDCRPQDLPRE 321
Query: 774 NVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKG------QQNPVFMAEPMRA 827
+L N P L E R N + + +
Sbjct: 322 --VLTTN-----------------P-RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIES 361
Query: 828 SNSFVGTEEY--------IAPE---IIAGAGHTSAVDWWALGILLYEMLYGYTP------ 870
S + + EY + P I + + L ++ ++++
Sbjct: 362 SLNVLEPAEYRKMFDRLSVFPPSAHI------PTIL----LSLIWFDVIK-SDVMVVVNK 410
Query: 871 FRGKT----RQKTFANILHK---DLKFPSSTPTSLHAKQL-MYRLLHRDPK--------- 913
+ + K + +LK +LH + Y +
Sbjct: 411 LHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLD 470
Query: 914 ----SRLGSH-EGANEIKKHPFFKGV----NW--ALVRCMNPPELDAPLFATDT---EKE 959
S +G H + ++ F+ V + +R + +A +T K
Sbjct: 471 QYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTA-WNASGSILNTLQQLKF 529
Query: 960 YK 961
YK
Sbjct: 530 YK 531
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 1e-13
Identities = 70/313 (22%), Positives = 111/313 (35%), Gaps = 65/313 (20%)
Query: 637 HSKVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQY 696
K+ P+ + + + + +I K +GSGD+G V L GQ
Sbjct: 17 QGKLPEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQR 76
Query: 697 F---AMKAMDKGVMLNRN----------KTKTH--------VC-------LITDYCPGGE 728
A+KA+ G + H V ++T+Y G
Sbjct: 77 DVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGS 136
Query: 729 LFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 788
L L + V V + YL G ++RDL NVL+ N ++DF
Sbjct: 137 LDTFLRTHDGQFTIMQLVGM-LRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDF 195
Query: 789 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH 848
LS +L + G + P+ + APE IA
Sbjct: 196 GLSR--------VLEDDPDAAYTTTGGKIPI----------------RWTAPEAIAFRTF 231
Query: 849 TSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANI-----LHKDLKFPSSTPTSLHAKQ 902
+SA D W+ G++++E+L YG P+ T + +++ L P P +LH Q
Sbjct: 232 SSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA----PMGCPHALH--Q 285
Query: 903 LMYRLLHRDPKSR 915
LM H+D R
Sbjct: 286 LMLDCWHKDRAQR 298
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 73.4 bits (180), Expect = 2e-13
Identities = 63/314 (20%), Positives = 112/314 (35%), Gaps = 60/314 (19%)
Query: 631 EDLWANHSKVVHPKPHRKDSPPWK---AIQKILDSGEQINLQHFRPIKPLGSGDTGSVHL 687
+ L A +SK HR + Q + +I + R LG G G V +
Sbjct: 226 QQLVAYYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWM 285
Query: 688 VELCGSGQYFAMKAMDKGVMLNRNK-----------------------TKTHVCLITDYC 724
G+ + A+K + G M + ++ + ++T+Y
Sbjct: 286 GTWNGTTR-VAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYM 343
Query: 725 PGGELF-LLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHV 783
G L L + V AA++ + Y+ ++RDL+ N+L+ N
Sbjct: 344 SKGSLLDFLKGETGKYLRLPQLVDM-AAQIASGMAYVERMNYVHRDLRAANILVGENLVC 402
Query: 784 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII 843
+ DF L+ +L+ + + +G + P+ + APE
Sbjct: 403 KVADFGLA-------RLI---EDNEYTARQGAKFPIK----------------WTAPEAA 436
Query: 844 AGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILHKD-LKFPSSTPTSLHAK 901
T D W+ GILL E+ G P+ G ++ + + P P SLH
Sbjct: 437 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH-- 494
Query: 902 QLMYRLLHRDPKSR 915
LM + ++P+ R
Sbjct: 495 DLMCQCWRKEPEER 508
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 2e-13
Identities = 60/277 (21%), Positives = 101/277 (36%), Gaps = 55/277 (19%)
Query: 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN--------KTKTH 716
++ LG G G V+ A+K + + M K H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 717 --------VC-------LITDYCPGGELF-LLLDRQPTKVLKEDAVRFYAAEVVVALEYL 760
VC +IT++ G L L + +V + A ++ A+EYL
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM-ATQISSAMEYL 127
Query: 761 HCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVF 820
+ I+RDL N L+ N V + DF LS L + + H G + P+
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT----------GDTYTAHAGAKFPI- 176
Query: 821 MAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKT 879
++ APE +A + D WA G+LL+E+ YG +P+ G +
Sbjct: 177 ---------------KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 221
Query: 880 FANILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+ + ++ P P ++ +LM +P R
Sbjct: 222 YELLEKDYRMERPEGCPEKVY--ELMRACWQWNPSDR 256
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 2e-13
Identities = 53/255 (20%), Positives = 93/255 (36%), Gaps = 70/255 (27%)
Query: 713 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKP 772
+ LI +Y +L +D+ P + ++ + +++ + + H + ++RDLKP
Sbjct: 104 HNHRLHLIFEYAEN-DLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKP 160
Query: 773 ENVLL-----QGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRA 827
+N+LL + + DF L+ R G P+R
Sbjct: 161 QNLLLSVSDASETPVLKIGDFGLA-------------------RAFG--------IPIRQ 193
Query: 828 SNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTR----QKTFAN 882
+ T Y PEI+ G+ H +++VD W++ + EML F G + K F
Sbjct: 194 FTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIF-E 252
Query: 883 IL----------HKDL-----KFPSSTPTSL----------HAKQLMYRLLHRDPKSRLG 917
+L L FP +L L+ +L DP R+
Sbjct: 253 VLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRI- 311
Query: 918 SHEGANEIKKHPFFK 932
A +HP+F
Sbjct: 312 ---SAKNALEHPYFS 323
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382 | Back alignment and structure |
|---|
Score = 72.1 bits (177), Expect = 2e-13
Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 35/166 (21%)
Query: 714 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--GIIYRDLK 771
+ H+CL+ + L+ LL + + + R +A ++ AL +L II+ DLK
Sbjct: 128 RNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLK 186
Query: 772 PENVLL--QGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASN 829
PEN+LL + + DF SC GQ+
Sbjct: 187 PENILLCNPKRSAIKIVDFGSSC-------------------QLGQR-----------IY 216
Query: 830 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 875
++ + Y +PE++ G + A+D W+LG +L EM G F G
Sbjct: 217 QYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 70.4 bits (173), Expect = 3e-13
Identities = 57/272 (20%), Positives = 98/272 (36%), Gaps = 61/272 (22%)
Query: 675 KPLGSGDTGSVHLVELCGSGQYF--AMKAMDKGVMLNRNK-------------------- 712
K LGSG+ G+V A+K + K
Sbjct: 23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 82
Query: 713 -----TKTHVCLITDYCPGGEL--FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGI 765
L+ + G L +L +R +K+ + +V + ++YL
Sbjct: 83 MIGICEAESWMLVMEMAELGPLNKYLQQNRH----VKDKNIIELVHQVSMGMKYLEESNF 138
Query: 766 IYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPM 825
++RDL NVLL + ++DF LS + L N K + G+ P+
Sbjct: 139 VHRDLAARNVLLVTQHYAKISDFGLS-------KALRADENYYKAQTHGKW-------PV 184
Query: 826 RASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANIL 884
+ + APE I +S D W+ G+L++E YG P+RG + A +
Sbjct: 185 K----------WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 234
Query: 885 H-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+ + P+ P ++ LM D ++R
Sbjct: 235 KGERMGCPAGCPREMY--DLMNLCWTYDVENR 264
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 3e-13
Identities = 65/341 (19%), Positives = 120/341 (35%), Gaps = 75/341 (21%)
Query: 637 HSKVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQY 696
++ ++ + P Q +L +I+ K +G+G+ G V+ L S
Sbjct: 16 TTENLYFQGAMGSDPN----QAVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGK 71
Query: 697 F----AMKAMDKGVMLNRNK------------------------TKTH-VCLITDYCPGG 727
A+K + G + +K + +IT+Y G
Sbjct: 72 KEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENG 131
Query: 728 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTD 787
L L + + V + ++YL ++RDL N+L+ N ++D
Sbjct: 132 ALDKFLREKDGEFSVLQLVGM-LRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSD 190
Query: 788 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG 847
F LS + L E G + P+ + APE I+
Sbjct: 191 FGLSRV--------LEDDPEATYTTSGGKIPI----------------RWTAPEAISYRK 226
Query: 848 HTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILHKD-LKFPSSTPTSLHAKQLMY 905
TSA D W+ GI+++E++ YG P+ + + I L P P++++ QLM
Sbjct: 227 FTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIY--QLMM 284
Query: 906 RLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPE 946
+ ++ R P F + L + + P+
Sbjct: 285 QCWQQERARR-------------PKFADIVSILDKLIRAPD 312
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 72.6 bits (178), Expect = 4e-13
Identities = 62/239 (25%), Positives = 98/239 (41%), Gaps = 48/239 (20%)
Query: 713 TKTHVCLITDYCPGGEL--FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 770
T+ V +I + C GEL FL + L ++ YA ++ AL YL + ++RD+
Sbjct: 461 TENPVWIIMELCTLGELRSFL---QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDI 517
Query: 771 KPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNS 830
NVL+ N V L DF LS + + +T K + K P++
Sbjct: 518 AARNVLVSSNDCVKLGDFGLS-------RYMEDSTYYKASKGK---------LPIK---- 557
Query: 831 FVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILHKD-L 888
++APE I TSA D W G+ ++E+L +G PF+G I + + L
Sbjct: 558 ------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL 611
Query: 889 KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPEL 947
P + P +L+ LM + DP R P F + L + +L
Sbjct: 612 PMPPNCPPTLY--SLMTKCWAYDPSRR-------------PRFTELKAQLSTILEEEKL 655
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 4e-13
Identities = 55/258 (21%), Positives = 90/258 (34%), Gaps = 62/258 (24%)
Query: 707 MLNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGII 766
N+ K + L+ D+C +L LL K ++ ++ L Y+H I+
Sbjct: 89 ASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVK-FTLSEIKRVMQMLLNGLYYIHRNKIL 146
Query: 767 YRDLKPENVLLQGNGHVSLTDFDLS-CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPM 825
+RD+K NVL+ +G + L DF L+ + K TN
Sbjct: 147 HRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNR------------------ 188
Query: 826 RASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI- 883
V T Y PE++ G +D W G ++ EM +G T Q A I
Sbjct: 189 ------VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS 242
Query: 884 ------------------LHKDLKFPSSTPTSL-----------HAKQLMYRLLHRDPKS 914
L++ L+ + +A L+ +LL DP
Sbjct: 243 QLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQ 302
Query: 915 RLGSHEGANEIKKHPFFK 932
R+ +++ H FF
Sbjct: 303 RI----DSDDALNHDFFW 316
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 71.7 bits (176), Expect = 4e-13
Identities = 61/304 (20%), Positives = 114/304 (37%), Gaps = 63/304 (20%)
Query: 638 SKVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYF 697
K+ P K PW+ +I + + K LG+G G V + +
Sbjct: 163 QKLSVPCMSSKPQKPWEKDAW------EIPRESLKLEKKLGAGQFGEVWMATYNKHTK-V 215
Query: 698 AMKAMDKGVMLNRNK-----------------------TKTHVCLITDYCPGGELF-LLL 733
A+K M G M + TK + +IT++ G L L
Sbjct: 216 AVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLK 274
Query: 734 DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793
+ +K + F +A++ + ++ + I+RDL+ N+L+ + + DF L+
Sbjct: 275 SDEGSKQPLPKLIDF-SAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA-- 331
Query: 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVD 853
+++ + + +G + P+ ++ APE I T D
Sbjct: 332 -----RVI---EDNEYTAREGAKFPI----------------KWTAPEAINFGSFTIKSD 367
Query: 854 WWALGILLYEML-YGYTPFRGKTRQKTFANILHKD-LKFPSSTPTSLHAKQLMYRLLHRD 911
W+ GILL E++ YG P+ G + + + + P + P L+ +M R
Sbjct: 368 VWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELY--NIMMRCWKNR 425
Query: 912 PKSR 915
P+ R
Sbjct: 426 PEER 429
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 5e-13
Identities = 56/304 (18%), Positives = 105/304 (34%), Gaps = 86/304 (28%)
Query: 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYF----AMKAMDKGVMLNRN--------- 711
Q +H + ++ LG G+ GSV + A+K + +
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 65
Query: 712 KTKTH--------VC---------LITDYCPGGEL--FLLLDRQPTKVLKEDAVRFYAAE 752
K+ H VC LI +Y P G L +L ++ + + + Y ++
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQ 122
Query: 753 VVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRH 812
+ +EYL + I+RDL N+L++ V + DF L+ +LP E +
Sbjct: 123 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT--------KVLPQDKEFFKVK 174
Query: 813 KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML------- 865
+ ++P+F + APE + + + A D W+ G++LYE+
Sbjct: 175 EPGESPIF----------------WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 218
Query: 866 ---------YGYTPFRGKTRQKTFANI-----LHKDLKFPSSTPTSLHAKQLMYRLLHRD 911
G + L + P P ++ +M + +
Sbjct: 219 SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR----PDGCPDEIY--MIMTECWNNN 272
Query: 912 PKSR 915
R
Sbjct: 273 VNQR 276
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 71.9 bits (176), Expect = 6e-13
Identities = 58/315 (18%), Positives = 106/315 (33%), Gaps = 56/315 (17%)
Query: 630 PEDLWANHSKVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKP-LGSGDTGSVHLV 688
P + + P P+ +++ D + + LG G+ GSV
Sbjct: 296 PARITSPDKPRPMPMDTSVFESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQG 355
Query: 689 ELCGSGQYF--AMKAMDKGVMLNRNK------------------------TKTHVCLITD 722
+ A+K + +G + + L+ +
Sbjct: 356 VYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVME 415
Query: 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 782
GG L L + + V +V + ++YL + ++R+L NVLL +
Sbjct: 416 MAGGGPLHKFL-VGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHY 474
Query: 783 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEI 842
++DF LS + L + R G+ P++ + APE
Sbjct: 475 AKISDFGLS-------KALGADDSYYTARSAGKW-------PLK----------WYAPEC 510
Query: 843 IAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILH-KDLKFPSSTPTSLHA 900
I +S D W+ G+ ++E L YG P++ + A I K ++ P P L+
Sbjct: 511 INFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELY- 569
Query: 901 KQLMYRLLHRDPKSR 915
LM + R
Sbjct: 570 -ALMSDCWIYKWEDR 583
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 6e-13
Identities = 45/217 (20%), Positives = 80/217 (36%), Gaps = 47/217 (21%)
Query: 717 VCLITDYCPGGEL--FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 774
+ L+ +Y P G L FL ++ L + Y++++ +EYL + ++RDL N
Sbjct: 101 LRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARN 157
Query: 775 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGT 834
+L++ HV + DF L+ LLP + + Q+P+F
Sbjct: 158 ILVESEAHVKIADFGLA--------KLLPLDKDYYVVREPGQSPIF-------------- 195
Query: 835 EEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILHKDLKF--- 890
+ APE ++ + D W+ G++LYE+ Y
Sbjct: 196 --WYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRL 253
Query: 891 ------------PSSTPTSLHAKQLMYRLLHRDPKSR 915
P + P +H +LM P+ R
Sbjct: 254 LELLEEGQRLPAPPACPAEVH--ELMKLCWAPSPQDR 288
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 7e-13
Identities = 40/207 (19%), Positives = 82/207 (39%), Gaps = 34/207 (16%)
Query: 713 TKTHVCLITDYCPGGEL--FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 770
+ + L+T Y P G L + RQ L + + ++ + YL G+++R+L
Sbjct: 85 PGSSLQLVTQYLPLGSLLDHV---RQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNL 141
Query: 771 KPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNS 830
NVLL+ V + DF ++ L ++K+ + + P+
Sbjct: 142 AARNVLLKSPSQVQVADFGVADLLP---------PDDKQLLYSEAKTPI----------- 181
Query: 831 FVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILHKD-L 888
+++A E I +T D W+ G+ ++E++ +G P+ G + + + L
Sbjct: 182 -----KWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERL 236
Query: 889 KFPSSTPTSLHAKQLMYRLLHRDPKSR 915
P ++ +M + D R
Sbjct: 237 AQPQICTIDVY--MVMVKCWMIDENIR 261
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 8e-13
Identities = 55/259 (21%), Positives = 95/259 (36%), Gaps = 50/259 (19%)
Query: 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 776
V ++T+Y G L L + + V + ++YL G ++RDL N+L
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LRGIASGMKYLSDMGYVHRDLAARNIL 179
Query: 777 LQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEE 836
+ N ++DF L + L E +G + P+
Sbjct: 180 INSNLVCKVSDFGLGRV--------LEDDPEAAYTTRGGKIPI----------------R 215
Query: 837 YIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANI-----LHKDLKF 890
+ +PE IA TSA D W+ GI+L+E++ YG P+ + Q + L
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP---- 271
Query: 891 PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAP 950
P P +L+ QLM +D +R P F+ + L + + P
Sbjct: 272 PMDCPAALY--QLMLDCWQKDRNNR-------------PKFEQIVSILDKLIRNPGSLKI 316
Query: 951 LFATDTEKEYKVVDPGMQD 969
+ + ++D D
Sbjct: 317 ITSAAARPSNLLLDQSNVD 335
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 1e-12
Identities = 58/333 (17%), Positives = 115/333 (34%), Gaps = 87/333 (26%)
Query: 636 NHSKVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCG--- 692
+H + + + + D + +H + ++ LG G+ GSV +
Sbjct: 9 HHDYDIPTTENLYFQGAMGSAFEDRDPTQ-FEERHLKFLQQLGKGNFGSVEMCRYDPLQD 67
Query: 693 -SGQYFAMKAMDKGVMLNRN---------KTKTH--------VC---------LITDYCP 725
+G+ A+K + + K+ H VC LI +Y P
Sbjct: 68 NTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 127
Query: 726 GGEL--FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHV 783
G L +L ++ + + + Y +++ +EYL + I+RDL N+L++ V
Sbjct: 128 YGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV 184
Query: 784 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII 843
+ DF L+ +LP E + + ++P+F + APE +
Sbjct: 185 KIGDFGLT--------KVLPQDKEYYKVKEPGESPIF----------------WYAPESL 220
Query: 844 AGAGHTSAVDWWALGILLYEML----------------YGYTPFRGKTRQKTFANI---- 883
+ + A D W+ G++LYE+ G +
Sbjct: 221 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 280
Query: 884 -LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
L + P P ++ +M + + R
Sbjct: 281 RLPR----PDGCPDEIY--MIMTECWNNNVNQR 307
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 69.7 bits (171), Expect = 2e-12
Identities = 57/304 (18%), Positives = 112/304 (36%), Gaps = 66/304 (21%)
Query: 639 KVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFA 698
+++ PK + SG +N++ + ++ +G G+ G V L + G A
Sbjct: 166 RLIKPKVMEGTVAAQDEFYR---SGWALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVA 220
Query: 699 MKAMDKGVMLN--------------RN---------KTKTHVCLITDYCPGGEL--FLLL 733
+K + N + K + ++T+Y G L +L
Sbjct: 221 VKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR- 279
Query: 734 DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793
R + + + ++F + +V A+EYL ++RDL NVL+ + ++DF L+
Sbjct: 280 SRGRSVLGGDCLLKF-SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK- 337
Query: 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVD 853
E + PV ++ APE + ++ D
Sbjct: 338 -------------EASSTQDTGKLPV----------------KWTAPEALREKKFSTKSD 368
Query: 854 WWALGILLYEML-YGYTPFRGKTRQKTFANILHKD-LKFPSSTPTSLHAKQLMYRLLHRD 911
W+ GILL+E+ +G P+ + + + P P +++ +M H D
Sbjct: 369 VWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVY--DVMKNCWHLD 426
Query: 912 PKSR 915
+R
Sbjct: 427 AATR 430
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 2e-12
Identities = 69/313 (22%), Positives = 112/313 (35%), Gaps = 75/313 (23%)
Query: 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYF---AMKAMDKGVMLNRNK--------- 712
+I + + +G G G VH A+K + +
Sbjct: 11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 70
Query: 713 ---------------TKTHVCLITDYCPGGEL--FLLLDRQPTKVLKEDAVRFYAAEVVV 755
T+ V +I + C GEL FL + L ++ YA ++
Sbjct: 71 RQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLST 127
Query: 756 ALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQ 815
AL YL + ++RD+ NVL+ N V L DF LS + + +T K + K
Sbjct: 128 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-------RYMEDSTYYKASKGK-- 178
Query: 816 QNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGK 874
P++ ++APE I TSA D W G+ ++E+L +G PF+G
Sbjct: 179 -------LPIK----------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 221
Query: 875 TRQKTFANILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933
I + + L P + P +L+ LM + DP R P F
Sbjct: 222 KNNDVIGRIENGERLPMPPNCPPTLY--SLMTKCWAYDPSRR-------------PRFTE 266
Query: 934 VNWALVRCMNPPE 946
+ L + +
Sbjct: 267 LKAQLSTILEEEK 279
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 67.2 bits (165), Expect = 3e-12
Identities = 56/280 (20%), Positives = 107/280 (38%), Gaps = 63/280 (22%)
Query: 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN--------KTKTH 716
I+ ++ +GSG G VHL + A+K + +G M + +H
Sbjct: 4 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEEDFIEEAEVMMKLSH 62
Query: 717 --------VC-------LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH 761
VC L+T++ G L L Q E + +V + YL
Sbjct: 63 PKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGM-CLDVCEGMAYLE 121
Query: 762 CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFM 821
+I+RDL N L+ N + ++DF ++ +++ G + PV
Sbjct: 122 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFV----------LDDQYTSSTGTKFPV-- 169
Query: 822 AEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTF 880
++ +PE+ + + ++S D W+ G+L++E+ G P+ ++ +
Sbjct: 170 --------------KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 215
Query: 881 ANI-----LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+I L+K P T ++ Q+M P+ R
Sbjct: 216 EDISTGFRLYK----PRLASTHVY--QIMNHCWRERPEDR 249
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 4e-12
Identities = 63/297 (21%), Positives = 111/297 (37%), Gaps = 68/297 (22%)
Query: 644 KPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMD 703
KP +D W ++ + + ++ LG+G G V + G + A+K++
Sbjct: 1 KPWWEDE--W-----------EVPRETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLK 46
Query: 704 KGVMLNRN--------KTKTH--------VC------LITDYCPGGELFLLL-DRQPTKV 740
+G M K H V +IT+Y G L L K+
Sbjct: 47 QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKL 106
Query: 741 LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800
+ AA++ + ++ + I+RDL+ N+L+ + DF L+ +L
Sbjct: 107 TINKLLDM-AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-------RL 158
Query: 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGIL 860
+ +G + P+ ++ APE I T D W+ GIL
Sbjct: 159 IEDNEYT---AREGAKFPI----------------KWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 861 LYEML-YGYTPFRGKTRQKTFANILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
L E++ +G P+ G T + N+ + P + P L+ QLM P+ R
Sbjct: 200 LTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY--QLMRLCWKERPEDR 254
|
| >3mqq_A Transcriptional regulator, LUXR family; PAS domain, PSI, MCSG, structural genomics, center for structural genomics; 1.65A {Burkholderia thailandensis} PDB: 3mqo_A Length = 120 | Back alignment and structure |
|---|
Score = 63.0 bits (154), Expect = 4e-12
Identities = 13/87 (14%), Positives = 30/87 (34%), Gaps = 2/87 (2%)
Query: 214 IMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAK-IRETLQNGQSYCGRLLNYKK 272
I + + +++GR+ L + + E + + I + SY + +
Sbjct: 24 IEDCNDELAAIFRCARADLIGRSFEVLYPSSDEFERIGERISPVMIAHGSYADDRIMKRA 83
Query: 273 DGTPFWNLLTIAPIKDDEGKVLKFIGM 299
G FW +T + D + +
Sbjct: 84 GGELFWCHVTGRAL-DRTAPLAAGVWT 109
|
| >3mqq_A Transcriptional regulator, LUXR family; PAS domain, PSI, MCSG, structural genomics, center for structural genomics; 1.65A {Burkholderia thailandensis} PDB: 3mqo_A Length = 120 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 6e-10
Identities = 14/95 (14%), Positives = 30/95 (31%), Gaps = 2/95 (2%)
Query: 492 LPDNPIIFASDSFLELTEYSREEILGRNCRFLQ-GPETDPATVRKIRAAIDNQTDVTVQL 550
D I +D + +R +++GR+ L + +I +
Sbjct: 19 SRDRVIEDCNDELAAIFRCARADLIGRSFEVLYPSSDEFERIGERISPVMIAHGSYADDR 78
Query: 551 INYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLD 585
I G+ FW + + D+ + + D
Sbjct: 79 IMKRAGGELFWCHVTGRAL-DRTAPLAAGVWTFED 112
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 5e-12
Identities = 44/205 (21%), Positives = 79/205 (38%), Gaps = 29/205 (14%)
Query: 713 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKP 772
+ L+ + GG L L + ++ + +V + ++YL + ++RDL
Sbjct: 80 QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAEL-LHQVSMGMKYLEEKNFVHRDLAA 138
Query: 773 ENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFV 832
NVLL + ++DF LS + L + R G+ P++
Sbjct: 139 RNVLLVNRHYAKISDFGLS-------KALGADDSYYTARSAGKW-------PLK------ 178
Query: 833 GTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILHKD-LKF 890
+ APE I +S D W+ G+ ++E L YG P++ + A I ++
Sbjct: 179 ----WYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMEC 234
Query: 891 PSSTPTSLHAKQLMYRLLHRDPKSR 915
P P L+ LM + R
Sbjct: 235 PPECPPELY--ALMSDCWIYKWEDR 257
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 6e-12
Identities = 53/253 (20%), Positives = 83/253 (32%), Gaps = 64/253 (25%)
Query: 717 VCLITDYCPGGEL--FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 774
+ L+ +Y P G L +L L +A ++ + YLH Q I+RDL N
Sbjct: 110 LQLVMEYVPLGSLRDYLPRHSIGLAQLLL-----FAQQICEGMAYLHAQHYIHRDLAARN 164
Query: 775 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVF-MAEPMRASNSFVG 833
VLL + V + DF L+ +P +E R + +PVF
Sbjct: 165 VLLDNDRLVKIGDFGLA--------KAVPEGHEYYRVREDGDSPVFWY------------ 204
Query: 834 TEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILHKDLKF-- 890
APE + A D W+ G+ LYE+L + + T+ I +
Sbjct: 205 -----APECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLR 259
Query: 891 -------------PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 937
P P ++ LM + R P F+ +
Sbjct: 260 LTELLERGERLPRPDKCPAEVY--HLMKNCWETEASFR-------------PTFENLIPI 304
Query: 938 LVRCMNPPELDAP 950
L + AP
Sbjct: 305 LKTVHEKYQGQAP 317
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 7e-12
Identities = 57/276 (20%), Positives = 101/276 (36%), Gaps = 55/276 (19%)
Query: 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN--------KTKTH 716
++ + +K LGSG G V L + G A+K + +G M +H
Sbjct: 4 ELKREEITLLKELGSGQFGVVKLGKWKGQ-YDVAVKMIKEGSMSEDEFFQEAQTMMKLSH 62
Query: 717 --------VC-------LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH 761
VC ++T+Y G L L + + +V + +L
Sbjct: 63 PKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEM-CYDVCEGMAFLE 121
Query: 762 CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFM 821
I+RDL N L+ + V ++DF ++ +++ G + PV
Sbjct: 122 SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYV----------LDDQYVSSVGTKFPV-- 169
Query: 822 AEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTF 880
++ APE+ ++S D WA GIL++E+ G P+ T +
Sbjct: 170 --------------KWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVV 215
Query: 881 ANILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+ L P +++ Q+MY H P+ R
Sbjct: 216 LKVSQGHRLYRPHLASDTIY--QIMYSCWHELPEKR 249
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 1e-11
Identities = 43/215 (20%), Positives = 83/215 (38%), Gaps = 35/215 (16%)
Query: 705 GVMLNRNKTKTHVCLITDYCPGGEL--FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC 762
G+ L +++ ++ Y G+L F+ + V +D + F +V ++YL
Sbjct: 93 GICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGF-GLQVAKGMKYLAS 146
Query: 763 QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 822
+ ++RDL N +L V + DF L+ + + G + PV
Sbjct: 147 KKFVHRDLAARNCMLDEKFTVKVADFGLA-------RDMYDKEYYSVHNKTGAKLPV--- 196
Query: 823 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFA 881
+++A E + T+ D W+ G+LL+E++ G P+
Sbjct: 197 -------------KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 243
Query: 882 NILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+L L P P L+ ++M + H + R
Sbjct: 244 YLLQGRRLLQPEYCPDPLY--EVMLKCWHPKAEMR 276
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 2e-11
Identities = 44/218 (20%), Positives = 77/218 (35%), Gaps = 49/218 (22%)
Query: 717 VCLITDYCPGGEL--FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 774
+ LI ++ P G L +L + + YA ++ ++YL + ++RDL N
Sbjct: 100 IKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARN 156
Query: 775 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVF-MAEPMRASNSFVG 833
VL++ V + DF L+ + T E + +PVF
Sbjct: 157 VLVESEHQVKIGDFGLT--------KAIETDKEYYTVKDDRDSPVFWY------------ 196
Query: 834 TEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILHKDLKF-- 890
APE + + A D W+ G+ L+E+L Y + H +
Sbjct: 197 -----APECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTR 251
Query: 891 -------------PSSTPTSLHAKQLMYRLLHRDPKSR 915
P + P ++ QLM + P +R
Sbjct: 252 LVNTLKEGKRLPCPPNCPDEVY--QLMRKCWEFQPSNR 287
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 66.0 bits (161), Expect = 2e-11
Identities = 61/313 (19%), Positives = 103/313 (32%), Gaps = 88/313 (28%)
Query: 704 KGVMLNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEV-------VVA 756
+ V L+ K V L+ DY +L+ ++ + V+ V +
Sbjct: 84 QKVFLSHADRK--VWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDG 140
Query: 757 LEYLHCQGIIYRDLKPENVLLQG----NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRH 812
+ YLH +++RDLKP N+L+ G G V + D + R
Sbjct: 141 IHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA-------------------RL 181
Query: 813 KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPF 871
+P+ +P+ + V T Y APE++ GA H T A+D WA+G + E+L F
Sbjct: 182 FN--SPL---KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 236
Query: 872 RGKT---------------------------------------------RQKTFANILHK 886
+ R+ T+ N
Sbjct: 237 HCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLI 296
Query: 887 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPE 946
A L+ +LL DP R+ + + + P+F +
Sbjct: 297 KYMEKHKVKPDSKAFHLLQKLLTMDPIKRI----TSEQAMQDPYFLEDPLPTSDVFAGCQ 352
Query: 947 LDAPLFATDTEKE 959
+ P TE+E
Sbjct: 353 IPYPKREFLTEEE 365
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 65.2 bits (159), Expect = 3e-11
Identities = 42/215 (19%), Positives = 84/215 (39%), Gaps = 35/215 (16%)
Query: 705 GVMLNRNKTKTHVCLITDYCPGGEL--FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC 762
G+ L +++ ++ Y G+L F+ + V +D + F +V +++L
Sbjct: 157 GICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGF-GLQVAKGMKFLAS 210
Query: 763 QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 822
+ ++RDL N +L V + DF L+ + + + G + PV
Sbjct: 211 KKFVHRDLAARNCMLDEKFTVKVADFGLA-------RDMYDKEFDSVHNKTGAKLPV--- 260
Query: 823 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFA 881
+++A E + T+ D W+ G+LL+E++ G P+
Sbjct: 261 -------------KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 307
Query: 882 NILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+L L P P L+ ++M + H + R
Sbjct: 308 YLLQGRRLLQPEYCPDPLY--EVMLKCWHPKAEMR 340
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 6e-11
Identities = 58/294 (19%), Positives = 91/294 (30%), Gaps = 86/294 (29%)
Query: 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYF---AMKAMDKGVMLNRNK--------- 712
I + + LG G G V+ A+K K L+ +
Sbjct: 8 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIM 67
Query: 713 ---------------TKTHVCLITDYCPGGEL--FLLLDRQPTKVLKEDAVRFYAAEVVV 755
+ +I + P GEL +L + LK + Y+ ++
Sbjct: 68 KNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYL---ERNKNSLKVLTLVLYSLQICK 124
Query: 756 ALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQ 815
A+ YL ++RD+ N+L+ V L DF LS
Sbjct: 125 AMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS------------------------ 160
Query: 816 QNPVFMAEPMRASNSFVGTEEYI------------APEIIAGAGHTSAVDWWALGILLYE 863
R + E+Y +PE I T+A D W + ++E
Sbjct: 161 ----------RY----IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWE 206
Query: 864 ML-YGYTPFRGKTRQKTFANILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+L +G PF + + D L P P L+ LM R DP R
Sbjct: 207 ILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLY--TLMTRCWDYDPSDR 258
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 63.0 bits (154), Expect = 8e-11
Identities = 57/287 (19%), Positives = 106/287 (36%), Gaps = 59/287 (20%)
Query: 654 KAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN---- 709
A + SG +N++ + ++ +G G+ G V L + G A+K +
Sbjct: 6 AAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLA 63
Query: 710 ----------RN---------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYA 750
N + K + ++T+Y G L L + VL D + ++
Sbjct: 64 EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 123
Query: 751 AEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKR 810
+V A+EYL ++RDL NVL+ + ++DF L+ E
Sbjct: 124 LDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT--------------KEASS 169
Query: 811 RHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYT 869
+ PV ++ APE + ++ D W+ GILL+E+ +G
Sbjct: 170 TQDTGKLPV----------------KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 213
Query: 870 PFRGKTRQKTFANILH-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
P+ + + + P P +++ ++M H D R
Sbjct: 214 PYPRIPLKDVVPRVEKGYKMDAPDGCPPAVY--EVMKNCWHLDAAMR 258
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 63.0 bits (154), Expect = 9e-11
Identities = 61/276 (22%), Positives = 102/276 (36%), Gaps = 55/276 (19%)
Query: 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN--------KTKTH 716
+I+ + +K LG+G G V + G A+K + +G M +H
Sbjct: 20 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAKVMMNLSH 78
Query: 717 --------VC-------LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH 761
VC +IT+Y G L L + + + +V A+EYL
Sbjct: 79 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLE 137
Query: 762 CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFM 821
+ ++RDL N L+ G V ++DF LS + +L G + PV
Sbjct: 138 SKQFLHRDLAARNCLVNDQGVVKVSDFGLS-------RYVLDDEYT---SSVGSKFPV-- 185
Query: 822 AEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTF 880
+ PE++ + +S D WA G+L++E+ G P+ T +T
Sbjct: 186 --------------RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 231
Query: 881 ANILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+I L P ++ +MY H R
Sbjct: 232 EHIAQGLRLYRPHLASEKVY--TIMYSCWHEKADER 265
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 2e-10
Identities = 63/304 (20%), Positives = 112/304 (36%), Gaps = 72/304 (23%)
Query: 649 DSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYF---AMKAMDKG 705
DS ++ +L E++ + +G G G V+ E Q A+K++ +
Sbjct: 4 DSALLAEVKDVLIPHERVVTHS---DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI 60
Query: 706 --------------VMLNRNKTKTH--------VCL--------ITDYCPGGEL--FLLL 733
+M + H + L + Y G+L F+
Sbjct: 61 TEMQQVEAFLREGLLM----RGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRS 116
Query: 734 DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793
++ V +D + F +V +EYL Q ++RDL N +L + V + DF L+
Sbjct: 117 PQRNPTV--KDLISF-GLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLA-- 171
Query: 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVD 853
+ +L ++H+ + PV ++ A E + T+ D
Sbjct: 172 -----RDILDREYYSVQQHRHARLPV----------------KWTALESLQTYRFTTKSD 210
Query: 854 WWALGILLYEML-YGYTPFRGKTRQKTFANILHKD-LKFPSSTPTSLHAKQLMYRLLHRD 911
W+ G+LL+E+L G P+R + L P P SL+ Q+M + D
Sbjct: 211 VWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLY--QVMQQCWEAD 268
Query: 912 PKSR 915
P R
Sbjct: 269 PAVR 272
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 8e-10
Identities = 49/205 (23%), Positives = 88/205 (42%), Gaps = 35/205 (17%)
Query: 718 CLITDYCPGGEL--FLLLDR---QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKP 772
+I + G+L FLL R P + + VRF ++ +EYL + I+RDL
Sbjct: 107 MVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF-MVDIACGMEYLSSRNFIHRDLAA 165
Query: 773 ENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFV 832
N +L + V + DF LS + + + ++ + P++
Sbjct: 166 RNCMLAEDMTVCVADFGLS--------RKIYSGDYYRQGCASKL-------PVK------ 204
Query: 833 GTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILHKD-LKF 890
++A E +A +T D WA G+ ++E++ G TP+ G + + ++ + LK
Sbjct: 205 ----WLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQ 260
Query: 891 PSSTPTSLHAKQLMYRLLHRDPKSR 915
P ++ LMY+ DPK R
Sbjct: 261 PPECMEEVY--DLMYQCWSADPKQR 283
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 9e-10
Identities = 47/247 (19%), Positives = 91/247 (36%), Gaps = 53/247 (21%)
Query: 717 VCLITDYCPGGEL--FLLLDR----QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 770
++ + GG+L FL R QP+ + D + A ++ +YL I+RD+
Sbjct: 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV-ARDIACGCQYLEENHFIHRDI 166
Query: 771 KPENVLLQGNGH---VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRA 827
N LL G + DF ++ + + ++ P++
Sbjct: 167 AARNCLLTCPGPGRVAKIGDFGMA--------RDIYRASYYRKGGCAML-------PVK- 210
Query: 828 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILH- 885
++ PE TS D W+ G+LL+E+ GY P+ K+ Q+ +
Sbjct: 211 ---------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 261
Query: 886 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCM-NP 944
+ P + P ++ ++M + P+ R P F + + C +P
Sbjct: 262 GRMDPPKNCPGPVY--RIMTQCWQHQPEDR-------------PNFAIILERIEYCTQDP 306
Query: 945 PELDAPL 951
++ L
Sbjct: 307 DVINTAL 313
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 1e-09
Identities = 46/252 (18%), Positives = 93/252 (36%), Gaps = 50/252 (19%)
Query: 717 VCLITDYCPGGEL--FLLLDRQPTKVLKEDAVR------FYAAEVVVALEYLHCQGIIYR 768
+I + G+L +L R A A E+ + YL+ ++R
Sbjct: 103 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 162
Query: 769 DLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRAS 828
DL N ++ + V + DF ++ + T+ ++ KG P+R
Sbjct: 163 DLAARNCMVAEDFTVKIGDFGMT--------RDIYETDYYRKGGKGLL-------PVR-- 205
Query: 829 NSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILH-K 886
+++PE + T+ D W+ G++L+E+ P++G + ++ ++
Sbjct: 206 --------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 257
Query: 887 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPE 946
L P + P L +LM +PK R P F + ++ M P
Sbjct: 258 LLDKPDNCPDMLF--ELMRMCWQYNPKMR-------------PSFLEIISSIKEEMEPGF 302
Query: 947 LDAPLFATDTEK 958
+ + ++ K
Sbjct: 303 REVSFYYSEENK 314
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 2e-09
Identities = 47/247 (19%), Positives = 90/247 (36%), Gaps = 53/247 (21%)
Query: 717 VCLITDYCPGGEL--FLLLDR----QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 770
++ + GG+L FL R QP+ + D + A ++ +YL I+RD+
Sbjct: 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV-ARDIACGCQYLEENHFIHRDI 207
Query: 771 KPENVLLQGNGH---VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRA 827
N LL G + DF ++ + ++ P++
Sbjct: 208 AARNCLLTCPGPGRVAKIGDFGMA--------RDIYRAGYYRKGGCAML-------PVK- 251
Query: 828 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILH- 885
++ PE TS D W+ G+LL+E+ GY P+ K+ Q+ +
Sbjct: 252 ---------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 302
Query: 886 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCM-NP 944
+ P + P ++ ++M + P+ R P F + + C +P
Sbjct: 303 GRMDPPKNCPGPVY--RIMTQCWQHQPEDR-------------PNFAIILERIEYCTQDP 347
Query: 945 PELDAPL 951
++ L
Sbjct: 348 DVINTAL 354
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 2e-09
Identities = 49/321 (15%), Positives = 93/321 (28%), Gaps = 89/321 (27%)
Query: 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYF-------AMKAMDKGVMLNRN------ 711
+I + + LG G + G Y +K +DK
Sbjct: 4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAA 63
Query: 712 ---KTKTH--------VC-------LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEV 753
+H VC L+ ++ G L L + + + A ++
Sbjct: 64 SMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEV-AKQL 122
Query: 754 VVALEYLHCQGIIYRDLKPENVLLQG--------NGHVSLTDFDLSCLTSCKPQLLLPTT 805
A+ +L +I+ ++ +N+LL + L+D +S +LP
Sbjct: 123 AAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS-------ITVLPKD 175
Query: 806 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEM 864
++ + ++ PE I + A D W+ G L+E+
Sbjct: 176 ILQE--------------RIP----------WVPPECIENPKNLNLATDKWSFGTTLWEI 211
Query: 865 L-YGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 923
G P Q+ + P+ L L+ + +P R
Sbjct: 212 CSGGDKPLSALDSQRKLQFY-EDRHQLPAPKAAELA--NLINNCMDYEPDHR-------- 260
Query: 924 EIKKHPFFKGVNWALVRCMNP 944
P F+ + L P
Sbjct: 261 -----PSFRAIIRDLNSLFTP 276
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 5e-09
Identities = 66/320 (20%), Positives = 116/320 (36%), Gaps = 74/320 (23%)
Query: 637 HSKVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQY 696
H R ++ ++ + L K LG G+ GSV L
Sbjct: 7 HHHHSSGLVPRGSEELQNKLEDVVIDRNLLIL-----GKILGEGEFGSVMEGNLKQEDGT 61
Query: 697 F---AMKAMDKGVMLNRNKTK-----------TH--------VCL------------ITD 722
A+K M R + +H VC+ I
Sbjct: 62 SLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILP 121
Query: 723 YCPGGEL--FLLLDR---QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL 777
+ G+L +LL R P + + ++F ++ + +EYL + ++RDL N +L
Sbjct: 122 FMKYGDLHTYLLYSRLETGPKHIPLQTLLKF-MVDIALGMEYLSNRNFLHRDLAARNCML 180
Query: 778 QGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEY 837
+ + V + DF LS + + + ++ + P++ +
Sbjct: 181 RDDMTVCVADFGLS--------KKIYSGDYYRQGRIAKM-------PVK----------W 215
Query: 838 IAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILHKD-LKFPSSTP 895
IA E +A +TS D WA G+ ++E+ G TP+ G + + +LH LK P
Sbjct: 216 IAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCL 275
Query: 896 TSLHAKQLMYRLLHRDPKSR 915
L+ ++MY DP R
Sbjct: 276 DELY--EIMYSCWRTDPLDR 293
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 6e-09
Identities = 47/246 (19%), Positives = 89/246 (36%), Gaps = 57/246 (23%)
Query: 717 VCLITDYCPGGEL--FL------------LLDRQPTKVLKEDAVRFYAAEVVVALEYLHC 762
+ ++ +Y G+L FL D P + + A++V + YL
Sbjct: 118 LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV-ASQVAAGMVYLAG 176
Query: 763 QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 822
++RDL N L+ V + DF +S + +T+ + +
Sbjct: 177 LHFVHRDLATRNCLVGQGLVVKIGDFGMS--------RDIYSTDYYRVGGRTML------ 222
Query: 823 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFA 881
P+R ++ PE I T+ D W+ G++L+E+ YG P+ + +
Sbjct: 223 -PIR----------WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID 271
Query: 882 NILH-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 940
I ++L+ P + P ++ +M R+P+ R K V+ L
Sbjct: 272 CITQGRELERPRACPPEVY--AIMRGCWQREPQQR-------------HSIKDVHARLQA 316
Query: 941 CMNPPE 946
P
Sbjct: 317 LAQAPP 322
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 6e-09
Identities = 50/253 (19%), Positives = 92/253 (36%), Gaps = 55/253 (21%)
Query: 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV----------MLNRNKTKTHVCL 719
+R + +GSG G ++L +G+ A+K + + +
Sbjct: 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPT 69
Query: 720 ITDYCPGG---------------ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG 764
I G +LF R+ + LK V A +++ +EY+H +
Sbjct: 70 IRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFS--LK--TVLLLADQMISRIEYIHSKN 125
Query: 765 IIYRDLKPENVLLQGNGH---VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFM 821
I+RD+KP+N L+ V + DF L+ + + +H
Sbjct: 126 FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK----------KYRDARTHQHI-------- 167
Query: 822 AEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG---KTRQK 878
P R + + GT Y + G + D +LG +L G P++G T+++
Sbjct: 168 --PYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ 225
Query: 879 TFANILHKDLKFP 891
+ I K + P
Sbjct: 226 KYERISEKKMSTP 238
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 9e-09
Identities = 47/257 (18%), Positives = 90/257 (35%), Gaps = 61/257 (23%)
Query: 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV----------MLNRNKTKTHVCL 719
H++ + +G G G + + Q A+K + T +
Sbjct: 11 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPN 70
Query: 720 ITDYCPGG---------------ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG 764
+ + G +L L R+ + +K V A +++ ++ +H +
Sbjct: 71 VYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFS--VK--TVAMAAKQMLARVQSIHEKS 126
Query: 765 IIYRDLKPENVLL-QGNGH----VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPV 819
++YRD+KP+N L+ + N + + DF + K R + +
Sbjct: 127 LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV----------------KFYRDPVTKQHI 170
Query: 820 FMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAV--DWWALGILLYEMLYGYTPFRG---K 874
P R + GT Y++ I G + D ALG + L G P++G
Sbjct: 171 ----PYREKKNLSGTARYMS--INTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA 224
Query: 875 TRQKTFANILHKDLKFP 891
T ++ + I K P
Sbjct: 225 TNKQKYERIGEKKQSTP 241
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 56.4 bits (137), Expect = 1e-08
Identities = 47/215 (21%), Positives = 82/215 (38%), Gaps = 43/215 (20%)
Query: 717 VCLITDYCPGGEL--FLLLDRQPTKVLKEDAVRF------------YAAEVVVALEYLHC 762
+ +I YC G+L FL++ + V D R A++ +EYL
Sbjct: 87 LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS 146
Query: 763 QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 822
++++DL NVL+ +V ++D L + + K
Sbjct: 147 HHVVHKDLATRNVLVYDKLNVKISDLGLF--------REVYAADYYKLLGNSLL------ 192
Query: 823 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFA 881
P+R ++APE I + D W+ G++L+E+ YG P+ G + Q
Sbjct: 193 -PIR----------WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVE 241
Query: 882 NILH-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
I + + L P P ++ LM + P R
Sbjct: 242 MIRNRQVLPCPDDCPAWVY--ALMIECWNEFPSRR 274
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 2e-08
Identities = 44/215 (20%), Positives = 83/215 (38%), Gaps = 43/215 (20%)
Query: 717 VCLITDYCPGGEL--FLLLDRQPTKVLKEDAVR------------FYAAEVVVALEYLHC 762
+ ++ +Y G+L FL +L + R A+++ + YL
Sbjct: 92 LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS 151
Query: 763 QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 822
Q ++RDL N L+ N V + DF +S + +T+ +
Sbjct: 152 QHFVHRDLATRNCLVGANLLVKIGDFGMS--------RDVYSTDYYRVGGHTML------ 197
Query: 823 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFA 881
P+R ++ PE I T+ D W+ G++L+E+ YG P+ + +
Sbjct: 198 -PIR----------WMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIE 246
Query: 882 NILH-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
I + L+ P P ++ +M R+P+ R
Sbjct: 247 CITQGRVLERPRVCPKEVY--DVMLGCWQREPQQR 279
|
| >3luq_A Sensor protein; PAS, histidine, kinase, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: PGE; 2.49A {Geobacter sulfurreducens} Length = 114 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 5e-08
Identities = 14/88 (15%), Positives = 29/88 (32%), Gaps = 1/88 (1%)
Query: 498 IFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSG 557
+ S + E +ILG + + PE R + + + G
Sbjct: 26 LAVSRRWREDYGLGDGDILGMSHYDI-FPEIGEEWKSVHRRGLAGEVIRVEEDCFVRADG 84
Query: 558 KKFWNLFHLQPMRDQKGEVQYFIGVQLD 585
+ W + ++P + +G V + D
Sbjct: 85 RTQWLRWEVRPWYEGEGRVGGVVIFTED 112
|
| >3luq_A Sensor protein; PAS, histidine, kinase, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: PGE; 2.49A {Geobacter sulfurreducens} Length = 114 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 7e-05
Identities = 13/93 (13%), Positives = 27/93 (29%), Gaps = 17/93 (18%)
Query: 215 MYASAGFFKMTGYTSKEVVGRNCRFLQGAGTD----PEDVAKIRET----LQNGQSYCGR 266
+ S + + G +++G + PE + + L
Sbjct: 26 LAVSRRWREDYGLGDGDILGM---------SHYDIFPEIGEEWKSVHRRGLAGEVIRVEE 76
Query: 267 LLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGM 299
+ DG W + P + EG+V +
Sbjct: 77 DCFVRADGRTQWLRWEVRPWYEGEGRVGGVVIF 109
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 5e-08
Identities = 48/216 (22%), Positives = 84/216 (38%), Gaps = 48/216 (22%)
Query: 717 VCLITDYCPGGEL--FLLLDRQPTKVLK-------------EDAVRFYAAEVVVALEYLH 761
+ L +Y P G L FL R + + F AA+V ++YL
Sbjct: 101 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF-AADVARGMDYLS 159
Query: 762 CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFM 821
+ I+RDL N+L+ N + DF LS ++ G+
Sbjct: 160 QKQFIHRDLAARNILVGENYVAKIADFGLS-----------RGQEVYVKKTMGRL----- 203
Query: 822 AEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTF 880
P+R ++A E + + +T+ D W+ G+LL+E++ G TP+ G T + +
Sbjct: 204 --PVR----------WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY 251
Query: 881 ANILH-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+ L+ P + ++ LM + P R
Sbjct: 252 EKLPQGYRLEKPLNCDDEVY--DLMRQCWREKPYER 285
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 6e-08
Identities = 48/221 (21%), Positives = 84/221 (38%), Gaps = 44/221 (19%)
Query: 712 KTKTHVCLITDYCPGGEL--FLLLDRQPTKVLKEDAVRF------------YAAEVVVAL 757
K + +I ++C G L +L R K Y+ +V +
Sbjct: 102 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGM 161
Query: 758 EYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQN 817
E+L + I+RDL N+LL V + DF L+ + + R+ +
Sbjct: 162 EFLASRKCIHRDLAARNILLSEKNVVKICDFGLA--------RDIYKDPDYVRKGDAR-- 211
Query: 818 PVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTR 876
P++ ++APE I +T D W+ G+LL+E+ G +P+ G
Sbjct: 212 -----LPLK----------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 256
Query: 877 QKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+ F L + ++ P T ++ Q M H +P R
Sbjct: 257 DEEFCRRLKEGTRMRAPDYTTPEMY--QTMLDCWHGEPSQR 295
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 54.6 bits (131), Expect = 7e-08
Identities = 40/170 (23%), Positives = 69/170 (40%), Gaps = 30/170 (17%)
Query: 749 YAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEK 808
Y+ +V +E+L + I+RDL N+LL V + DF L+ +
Sbjct: 198 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI---------YKDPD 248
Query: 809 KRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YG 867
R + P+ +++APE I +T D W+ G+LL+E+ G
Sbjct: 249 YVRKGDARLPL----------------KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 292
Query: 868 YTPFRGKTRQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+P+ G + F L + ++ P T ++ Q M H +P R
Sbjct: 293 ASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY--QTMLDCWHGEPSQR 340
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 7e-08
Identities = 46/215 (21%), Positives = 83/215 (38%), Gaps = 43/215 (20%)
Query: 717 VCLITDYCPGGEL--FLLLDRQPTKVLKEDAVRF------------YAAEVVVALEYLHC 762
+ +I +Y G L +L R P D R ++ +EYL
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 763 QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 822
Q I+RDL NVL+ N + + DF L+ + + K+ G+
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLA--------RDINNIDYYKKTTNGR------- 220
Query: 823 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFA 881
P++ ++APE + +T D W+ G+L++E+ G +P+ G ++ F
Sbjct: 221 LPVK----------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 882 NILH-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+ + P++ L+ +M H P R
Sbjct: 271 LLKEGHRMDKPANCTNELY--MMMRDCWHAVPSQR 303
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 9e-08
Identities = 44/282 (15%), Positives = 78/282 (27%), Gaps = 65/282 (23%)
Query: 642 HPKPHRKDSPPWKAIQKI-LDSGEQINL---QHFRPIKPLGSGDTGSVHLVELCGSGQYF 697
H Q + G+ ++ + K +GSG G ++L +
Sbjct: 6 HHSSGVDLGTENLYFQSMPFPEGKVLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKD 65
Query: 698 AMKAM-----DKGV------MLNRNKTKTHVCLITDYCPGGEL----------------- 729
A + + G R K + + L
Sbjct: 66 ARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRS 125
Query: 730 --FLLLDR---------QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL- 777
F++++R K+ V ++ LEY+H ++ D+K N+LL
Sbjct: 126 YRFMVMERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLG 185
Query: 778 QGNGH-VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEE 836
N V L D+ LS + G GT E
Sbjct: 186 YKNPDQVYLADYGLS----------------YRYCPNGNHKQY----QENPRKGHNGTIE 225
Query: 837 YIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878
+ + + G + D LG + L G P+ +
Sbjct: 226 FTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP 267
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 53.7 bits (130), Expect = 1e-07
Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 28/112 (25%)
Query: 757 LEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQ 816
+ +LH I+RD+K N+LL ++DF L+ + Q
Sbjct: 146 INFLHENHHIHRDIKSANILLDEAFTAKISDFGLA-----R---ASEK---------FAQ 188
Query: 817 NPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYG 867
+ ++ VGT Y+APE + G T D ++ G++L E++ G
Sbjct: 189 TVM--------TSRIVGTTAYMAPEAL--RGEITPKSDIYSFGVVLLEIITG 230
|
| >3b33_A Sensor protein; structural genomics, PAS domain, nitrogen regulation protein APC91440.4, PSI-2; HET: MSE; 1.83A {Vibrio parahaemolyticus rimd 2210633} Length = 115 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 1e-07
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 214 IMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKD 273
I YA+ + ++K +V ++ Q D+A + + LQ+GQS + + D
Sbjct: 29 IRYANPAAELLFSQSAKRIVEQSLS--QLIQHASLDLALLTQPLQSGQSITDSDVTFVVD 86
Query: 274 GTPFWNLLTIAPIKDDEGKVL 294
G P +T++PI +L
Sbjct: 87 GRPLMLEVTVSPITWQRQLML 107
|
| >3b33_A Sensor protein; structural genomics, PAS domain, nitrogen regulation protein APC91440.4, PSI-2; HET: MSE; 1.83A {Vibrio parahaemolyticus rimd 2210633} Length = 115 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 4e-05
Identities = 14/92 (15%), Positives = 35/92 (38%), Gaps = 7/92 (7%)
Query: 486 VITDPRLPDNPIIFASDSFLELTEYSREEILGRNC-RFLQGPETDPATVRKIRAAIDNQT 544
+I D I +A+ + L S + I+ ++ + +Q D A + + +
Sbjct: 21 LILDD---GLAIRYANPAAELLFSQSAKRIVEQSLSQLIQHASLDLAL---LTQPLQSGQ 74
Query: 545 DVTVQLINYTKSGKKFWNLFHLQPMRDQKGEV 576
+T + + G+ + P+ Q+ +
Sbjct: 75 SITDSDVTFVVDGRPLMLEVTVSPITWQRQLM 106
|
| >2r78_A Sensor protein; sensory box sensor histidine kinase/response regulator, structural genomics, PSI, MCSG; 1.60A {Geobacter sulfurreducens pca} Length = 117 | Back alignment and structure |
|---|
Score = 50.2 bits (121), Expect = 1e-07
Identities = 13/93 (13%), Positives = 28/93 (30%), Gaps = 12/93 (12%)
Query: 210 PDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQ---NGQSYCGR 266
+ + + GYT E + + L + D +L G+
Sbjct: 29 AEGHYLDVNPAICSAIGYTRDEFLALDWGVL----SRGVDSGWAAASLARIVGGEPLREE 84
Query: 267 LLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGM 299
+ ++G L+ + D K +G+
Sbjct: 85 RTVWTRNGDQLTVELSAHLLPDG-----KILGI 112
|
| >2r78_A Sensor protein; sensory box sensor histidine kinase/response regulator, structural genomics, PSI, MCSG; 1.60A {Geobacter sulfurreducens pca} Length = 117 | Back alignment and structure |
|---|
Score = 49.1 bits (118), Expect = 3e-07
Identities = 10/86 (11%), Positives = 28/86 (32%), Gaps = 6/86 (6%)
Query: 497 IIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKS 556
+ + + Y+R+E L + L + + + + + +T++
Sbjct: 33 YLDVNPAICSAIGYTRDEFLALDWGVLSRGVDSGWAAASLARIVGGEP-LREERTVWTRN 91
Query: 557 GKKFWNLFHLQPMRDQKGEVQYFIGV 582
G + + D K +G+
Sbjct: 92 GDQLTVELSAHLLPDGK-----ILGI 112
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 1e-07
Identities = 54/274 (19%), Positives = 95/274 (34%), Gaps = 59/274 (21%)
Query: 717 VCLITDYCPGGEL--FLLLDRQPTKVLKEDAVRF------------YAAEVVVALEYLHC 762
+ +I +Y G L +L R P + A +V +EYL
Sbjct: 150 LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS 209
Query: 763 QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPV-FM 821
+ I+RDL NVL+ + + + DF L+ + ++ + PV +M
Sbjct: 210 KKCIHRDLAARNVLVTEDNVMKIADFGLARDIH---------HIDYYKKTTNGRLPVKWM 260
Query: 822 AEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTF 880
APE + +T D W+ G+LL+E+ G +P+ G ++ F
Sbjct: 261 -----------------APEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 303
Query: 881 ANILH-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 939
+ + PS+ L+ +M H P R P FK + L
Sbjct: 304 KLLKEGHRMDKPSNCTNELY--MMMRDCWHAVPSQR-------------PTFKQLVEDLD 348
Query: 940 RCMNPPELDAPLFATDTEKEYKVVDPGMQDLQQN 973
R + + + + P ++L N
Sbjct: 349 RIVALTS-NQEMGYYHHHHHHDYDIPTTENLYFN 381
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 2e-07
Identities = 41/223 (18%), Positives = 87/223 (39%), Gaps = 51/223 (22%)
Query: 717 VCLITDYCPGGEL--FLLLDRQPTKVLKEDAVRF--------------------YAAEVV 754
+ LI +Y G L FL R+ +A ++
Sbjct: 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQIS 160
Query: 755 VALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKG 814
++YL +++RDL N+L+ + ++DF LS + + +R +G
Sbjct: 161 QGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLS--------RDVYEEDSYVKRSQG 212
Query: 815 QQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRG 873
+ P++ ++A E + +T+ D W+ G+LL+E++ G P+ G
Sbjct: 213 R-------IPVK----------WMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 255
Query: 874 KTRQKTFANILH-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
++ F + ++ P + ++ +LM + ++P R
Sbjct: 256 IPPERLFNLLKTGHRMERPDNCSEEMY--RLMLQCWKQEPDKR 296
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 2e-07
Identities = 46/215 (21%), Positives = 83/215 (38%), Gaps = 43/215 (20%)
Query: 717 VCLITDYCPGGEL--FLLLDRQPTKVLKEDAVRF------------YAAEVVVALEYLHC 762
+ +I +Y G L +L R P D R ++ +EYL
Sbjct: 162 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 221
Query: 763 QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 822
Q I+RDL NVL+ N + + DF L+ + + K+ G+
Sbjct: 222 QKCIHRDLAARNVLVTENNVMKIADFGLA--------RDINNIDYYKKTTNGR------- 266
Query: 823 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFA 881
P++ ++APE + +T D W+ G+L++E+ G +P+ G ++ F
Sbjct: 267 LPVK----------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 316
Query: 882 NILH-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+ + P++ L+ +M H P R
Sbjct: 317 LLKEGHRMDKPANCTNELY--MMMRDCWHAVPSQR 349
|
| >2vlg_A Sporulation kinase A; histidine kinase, two-component regulatory system, two-component signal transduction, transferase, phosphorylation, SCOD; 1.7A {Bacillus subtilis} Length = 111 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 5e-07
Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 9/99 (9%)
Query: 210 PDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG---R 266
+ I+Y SA GY E++G + ED + N R
Sbjct: 17 SNGRIIYISANSKLHLGYLQGEMIGSFLKTF----LHEEDQFLVESYFYNEHHLMPCTFR 72
Query: 267 LLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSK 305
+ KKD T W + + + + I ++++V +
Sbjct: 73 FI--KKDHTIVWVEAAVEIVTTRAERTEREIILKMKVLE 109
|
| >2vlg_A Sporulation kinase A; histidine kinase, two-component regulatory system, two-component signal transduction, transferase, phosphorylation, SCOD; 1.7A {Bacillus subtilis} Length = 111 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 3e-04
Identities = 15/96 (15%), Positives = 32/96 (33%), Gaps = 3/96 (3%)
Query: 493 PDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 552
+ II+ S + Y + E++G + E D V + T + I
Sbjct: 17 SNGRIIYISANSKLHLGYLQGEMIGSFLKTFLHEE-DQFLVESYFYNEHHLMPCTFRFI- 74
Query: 553 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSE 588
K W ++ + + + I +++ E
Sbjct: 75 -KKDHTIVWVEAAVEIVTTRAERTEREIILKMKVLE 109
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 5e-07
Identities = 53/254 (20%), Positives = 86/254 (33%), Gaps = 64/254 (25%)
Query: 717 VCLITDYCPGGEL--FLLLDRQPTKVLKEDAVRFY--------------------AAEVV 754
+CL+ +Y G+L FL T + A +V
Sbjct: 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVA 184
Query: 755 VALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKG 814
+ YL + ++RDL N L+ N V + DF LS + + + K
Sbjct: 185 AGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLS--------RNIYSADYYKADGND 236
Query: 815 QQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRG 873
P+R ++ PE I +T+ D WA G++L+E+ YG P+ G
Sbjct: 237 AI-------PIR----------WMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 279
Query: 874 KTRQKTFANILH-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
++ + L P + P L+ LM + P R P F
Sbjct: 280 MAHEEVIYYVRDGNILACPENCPLELY--NLMRLCWSKLPADR-------------PSFC 324
Query: 933 GVNWALVRCMNPPE 946
++ L R E
Sbjct: 325 SIHRILQRMCERAE 338
|
| >3bwl_A Sensor protein; structural genomics, APC87707.1, PAS domain, HTR-like protei protein structure initiative; HET: MSE I3A; 1.73A {Haloarcula marismortui atcc 43049} Length = 126 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 5e-07
Identities = 15/98 (15%), Positives = 26/98 (26%), Gaps = 6/98 (6%)
Query: 485 FVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQT 544
+ D D I + F Y E+LGR+ D V+ +
Sbjct: 30 IDVLDA---DGTICEVNQRFCAELGYDESEVLGRSIWEF-DLMFDAEDVQTQLSGFSVDE 85
Query: 545 DVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGV 582
+ + + G HL F+ +
Sbjct: 86 RRKFEGLYERRDGSTMSVEVHLLRFNL--EGEDRFLAI 121
|
| >3bwl_A Sensor protein; structural genomics, APC87707.1, PAS domain, HTR-like protei protein structure initiative; HET: MSE I3A; 1.73A {Haloarcula marismortui atcc 43049} Length = 126 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 6e-07
Identities = 15/81 (18%), Positives = 25/81 (30%), Gaps = 1/81 (1%)
Query: 214 IMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKD 273
I + F GY EV+GR+ D EDV + L ++D
Sbjct: 39 ICEVNQRFCAELGYDESEVLGRSIWEF-DLMFDAEDVQTQLSGFSVDERRKFEGLYERRD 97
Query: 274 GTPFWNLLTIAPIKDDEGKVL 294
G+ + + +
Sbjct: 98 GSTMSVEVHLLRFNLEGEDRF 118
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 7e-07
Identities = 56/255 (21%), Positives = 97/255 (38%), Gaps = 57/255 (22%)
Query: 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMK----------AMDKGVMLNRNKTKTHVCL 719
+FR K +G G+ G + L + + +Y A+K + + + +
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQ 69
Query: 720 ITDYCPGG---------------ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG 764
+ + P G +LF L DR + LK V A +++ +EY+H +
Sbjct: 70 VYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFS--LK--TVLMIAIQLISRMEYVHSKN 125
Query: 765 IIYRDLKPENVLLQGNGH-----VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPV 819
+IYRD+KPEN L+ G+ + + DF L+ K+ + +
Sbjct: 126 LIYRDVKPENFLIGRPGNKTQQVIHIIDFALA----------------KEYIDPETKKHI 169
Query: 820 FMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG---KTR 876
P R S GT Y++ G + D ALG + L G P++G T
Sbjct: 170 ----PYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL 225
Query: 877 QKTFANILHKDLKFP 891
++ + I P
Sbjct: 226 KERYQKIGDTKRATP 240
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 7e-07
Identities = 30/144 (20%), Positives = 58/144 (40%), Gaps = 22/144 (15%)
Query: 732 LLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL--QGNGHVSLTDFD 789
LD P VL E +V A ++ ALE+LH ++ ++ EN+ + + V+L +
Sbjct: 147 ALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYG 206
Query: 790 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT 849
+ + G+ + + G E+I+ ++ G G +
Sbjct: 207 FA----------------FRYCPSGKHVA----YVEGSRSPHEGDLEFISMDLHKGCGPS 246
Query: 850 SAVDWWALGILLYEMLYGYTPFRG 873
D +LG + + LYG+ P+
Sbjct: 247 RRSDLQSLGYCMLKWLYGFLPWTN 270
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 1e-06
Identities = 25/131 (19%), Positives = 46/131 (35%), Gaps = 22/131 (16%)
Query: 750 AAEVVVALEYLHCQGIIYRDLKPENVLL-QGNGH-VSLTDFDLSCLTSCKPQLLLPTTNE 807
+ ++ LEY+H ++ D+K N+LL N V L D+ L+
Sbjct: 158 SLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLA---------------- 201
Query: 808 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYG 867
+ +G GT E+ + + G + D LG + + L G
Sbjct: 202 YRYCPEGVHKAY----AADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTG 257
Query: 868 YTPFRGKTRQK 878
+ P+ +
Sbjct: 258 HLPWEDNLKDP 268
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 1e-06
Identities = 47/216 (21%), Positives = 82/216 (37%), Gaps = 46/216 (21%)
Query: 717 VCLITDYCPGGEL--FLLLDRQPTKVLK-----------EDAVRFYAAEVVVALEYLHCQ 763
V +IT+YC G+L FL + + D + F +++V + +L +
Sbjct: 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF-SSQVAQGMAFLASK 183
Query: 764 GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPV-FMA 822
I+RD+ NVLL + DF L+ + + + + PV +M
Sbjct: 184 NCIHRDVAARNVLLTNGHVAKIGDFGLA--------RDIMNDSNYIVKGNARL-PVKWM- 233
Query: 823 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRG-KTRQKTF 880
APE I +T D W+ GILL+E+ G P+ G K +
Sbjct: 234 ----------------APESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY 277
Query: 881 ANILH-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+ + P+ P +++ +M +P R
Sbjct: 278 KLVKDGYQMAQPAFAPKNIY--SIMQACWALEPTHR 311
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483 | Back alignment and structure |
|---|
Score = 51.2 bits (122), Expect = 1e-06
Identities = 45/232 (19%), Positives = 85/232 (36%), Gaps = 52/232 (22%)
Query: 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV----------MLNRNKTKTHVCL 719
FR + +GSG G ++L + + A+K + + + T +
Sbjct: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPN 67
Query: 720 ITDYCPGG---------------ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG 764
+ + G +LF R+ + LK V A +++ +E++H +
Sbjct: 68 VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLS--LK--TVLMLADQMINRVEFVHSKS 123
Query: 765 IIYRDLKPENVLLQGNGH---VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFM 821
++RD+KP+N L+ V + DF L+ + +H
Sbjct: 124 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAK----------KYRDTSTHQHI-------- 165
Query: 822 AEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 873
P R + + GT Y + G + D +LG +L L G P++G
Sbjct: 166 --PYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 215
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 2e-06
Identities = 47/219 (21%), Positives = 76/219 (34%), Gaps = 48/219 (21%)
Query: 717 VCLITDYCPGGEL--FLLLDRQPTKVLKEDAVRF--------------YAAEVVVALEYL 760
+IT+YC G+L FL R K ++ +V + +L
Sbjct: 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL 161
Query: 761 HCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPV- 819
+ I+RDL N+LL + DF L+ + + + + PV
Sbjct: 162 ASKNCIHRDLAARNILLTHGRITKICDFGLA--------RDIKNDSNYVVKGNA-RLPVK 212
Query: 820 FMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRG-KTRQ 877
+M APE I +T D W+ GI L+E+ G +P+ G
Sbjct: 213 WM-----------------APESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 255
Query: 878 KTFANILH-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
K + I + P P ++ +M DP R
Sbjct: 256 KFYKMIKEGFRMLSPEHAPAEMY--DIMKTCWDADPLKR 292
|
| >3mjq_A Uncharacterized protein; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium; 2.60A {Desulfitobacterium hafniense} Length = 126 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 4e-06
Identities = 12/98 (12%), Positives = 32/98 (32%), Gaps = 6/98 (6%)
Query: 485 FVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQT 544
+I + + +++A+ + + Y+ EE++ + + A KI A +
Sbjct: 12 ILIINR---EGRLLYANTAVPKKLGYTHEELMSMHILTIT-SAGKMAEGEKILAELFAGK 67
Query: 545 DVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGV 582
++ L K G + + +
Sbjct: 68 KESLPLSLEKKEGTSIPAKARIWQGKW--HNEPCLFAI 103
|
| >3mjq_A Uncharacterized protein; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium; 2.60A {Desulfitobacterium hafniense} Length = 126 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 2e-05
Identities = 19/81 (23%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Query: 214 IMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKD 273
++YA+ K GYT +E++ + + + + KI L G+ L KK+
Sbjct: 21 LLYANTAVPKKLGYTHEELMSMHILTIT-SAGKMAEGEKILAELFAGKKESLPLSLEKKE 79
Query: 274 GTPFWNLLTIAPIKDDEGKVL 294
GT I K L
Sbjct: 80 GTSIPAKARIWQGKWHNEPCL 100
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 1e-05
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 757 LEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 791
L YLH + II+RD+K N+LL N +TDF +S
Sbjct: 152 LHYLHTRAIIHRDVKSINILLDENFVPKITDFGIS 186
|
| >3olo_A Two-component sensor histidine kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, TRA; 2.09A {Nostoc SP} Length = 118 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 1e-05
Identities = 18/98 (18%), Positives = 37/98 (37%), Gaps = 10/98 (10%)
Query: 485 FVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQT 544
+ ++ +D+ +TEYSRE++L N + + D I +
Sbjct: 26 SFCLGD---NWQFLYVNDATCRMTEYSREQLLSMNLQDI-----DVDFALHDWEEIRQKN 77
Query: 545 DVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGV 582
+ T + ++SG+ F L + DQ+ +
Sbjct: 78 NYTFKTRYRSQSGRIFLVEMSLTFLEDQERR--FSCVF 113
|
| >3olo_A Two-component sensor histidine kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, TRA; 2.09A {Nostoc SP} Length = 118 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 3e-05
Identities = 12/81 (14%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Query: 214 IMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKD 273
+Y + +MT Y+ ++++ N + + D + E ++ +Y + +
Sbjct: 35 FLYVNDATCRMTEYSREQLLSMNLQDI-----DVDFALHDWEEIRQKNNYTFKTRYRSQS 89
Query: 274 GTPFWNLLTIAPIKDDEGKVL 294
G F +++ ++D E +
Sbjct: 90 GRIFLVEMSLTFLEDQERRFS 110
|
| >3fc7_A HTR-like protein, sensor protein; APC87712.1, HTR-like protein,haloarcula marismortui ATCC 430 structural genomics, PSI-2; 2.65A {Haloarcula marismortui} Length = 125 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 2e-05
Identities = 12/86 (13%), Positives = 30/86 (34%), Gaps = 6/86 (6%)
Query: 497 IIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKS 556
I+ + S + ++G+ + E + ++A++N T +
Sbjct: 41 ILSVNPSMAGRLGADPDTLVGQQLSAVMDSEAANQRLEAGKSAVENGTATRSE---DAVG 97
Query: 557 GKKFWNLFHLQPMRDQKGEVQYFIGV 582
G+ + N + P+ + F V
Sbjct: 98 GRHYHNQYI--PVDSH-RKSDTFQLV 120
|
| >3fc7_A HTR-like protein, sensor protein; APC87712.1, HTR-like protein,haloarcula marismortui ATCC 430 structural genomics, PSI-2; 2.65A {Haloarcula marismortui} Length = 125 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 3e-04
Identities = 12/86 (13%), Positives = 27/86 (31%), Gaps = 6/86 (6%)
Query: 214 IMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKD 273
I+ + G +VG+ + + + + + ++NG +
Sbjct: 41 ILSVNPSMAGRLGADPDTLVGQQLSAVMDSEAANQRLEAGKSAVENGTA---TRSEDAVG 97
Query: 274 GTPFWNLLTIAPIKDDEGKVLKFIGM 299
G + N P+ D K F +
Sbjct: 98 GRHYHN--QYIPV-DSHRKSDTFQLV 120
|
| >3eeh_A Putative light and redox sensing histidine kinase; structural genomic MCSG, protein structure initiative, midwest center for STRU genomics; HET: PG5; 1.95A {Haloarcula marismortui} Length = 125 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 3e-05
Identities = 18/90 (20%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Query: 214 IMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQ---NGQSYCG--RLL 268
++ ++ + + G + ++ FL G PED +++T+Q +G+S R+
Sbjct: 34 VLVINSAYEDIWGRSVAKLRENPHDFLNG--IHPEDRELMKDTMQSLMDGESADVECRVN 91
Query: 269 NYKKDGTPFWNLLTIAPIKDDEGKVLKFIG 298
+ W + PI +D G+ ++ G
Sbjct: 92 A--TEEYQRWVWIQGEPITNDAGETVRVAG 119
|
| >3icy_A Sensor protein; sensory box histidine kinase/response regulator domain, kinase, chlorobium tepidum TLS, PSI-2; 2.68A {Chlorobaculum tepidum} Length = 118 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 3e-05
Identities = 16/99 (16%), Positives = 28/99 (28%), Gaps = 12/99 (12%)
Query: 493 PDNPIIFASDSFLELTEYSREEILGRNCRFLQG--PETDPATVRK-IRAAIDNQTDVTVQ 549
I F +FL+ E L + D + + + +T+
Sbjct: 24 GQATIRFRPPAFLKT--LVSEHAGTTRLNTLSMIHHD-DRHMLSNAYSKLREAKHSLTLV 80
Query: 550 LINY---TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLD 585
Y T GK W H++ G G+ +
Sbjct: 81 ---YRIVTPEGKLHWIEDHMRSSFSDDGLFSGIDGILCE 116
|
| >3icy_A Sensor protein; sensory box histidine kinase/response regulator domain, kinase, chlorobium tepidum TLS, PSI-2; 2.68A {Chlorobaculum tepidum} Length = 118 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 2e-04
Identities = 12/95 (12%), Positives = 21/95 (22%), Gaps = 12/95 (12%)
Query: 210 PDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQ----NGQSYCG 265
I + F K N + +D + S
Sbjct: 24 GQATIRFRPPAFLKTLVSEHAGTTRLNTL----SMIHHDDRHMLSNAYSKLREAKHSLTL 79
Query: 266 --RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIG 298
R++ +G W + D+G G
Sbjct: 80 VYRIVT--PEGKLHWIEDHMRSSFSDDGLFSGIDG 112
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 3e-05
Identities = 40/309 (12%), Positives = 88/309 (28%), Gaps = 39/309 (12%)
Query: 639 KVVH-PKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDT------GSVHLV--- 688
K++ P + K ++IL E I + + T SVH V
Sbjct: 49 KIIAIEGPDLVNGSHQKTFEEILP--EIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGS 106
Query: 689 ---ELCGSGQYFAMKAMDKGVMLNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDA 745
L + ++ + K + ++ ++ GG L++ TK+
Sbjct: 107 YPPLLLKAWDHYNSTKGSANDRPDFFK-DDQLFIVLEFEFGGID---LEQMRTKLSSLAT 162
Query: 746 VRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 804
+ ++ +L +RDL NVLL+ L
Sbjct: 163 AKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNG------------- 209
Query: 805 TNEKKRRHKGQQNPV--FMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 862
G Q + + + V + + ++ G G + +
Sbjct: 210 -KSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGDGDYQFDIYRLMKKENN 268
Query: 863 EMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGA 922
Y P+ + + K + F + T + + R + ++ + + A
Sbjct: 269 NRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQ--IKRKI-QEFHRTMLNFSSA 325
Query: 923 NEIKKHPFF 931
++
Sbjct: 326 TDLLCQHSL 334
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 4e-05
Identities = 31/119 (26%), Positives = 47/119 (39%), Gaps = 31/119 (26%)
Query: 757 LEYLHCQG---IIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 813
L YLH II+RD+K N+LL + DF L+ K L+ + H
Sbjct: 144 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-----K---LMDYKDT----H- 190
Query: 814 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPF 871
+ + GT +IAPE G + D + G++L E++ G F
Sbjct: 191 -------------VTTAVRGTIGHIAPE-YLSTGKSSEKTDVFGYGVMLLELITGQRAF 235
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 8e-05
Identities = 43/222 (19%), Positives = 80/222 (36%), Gaps = 51/222 (22%)
Query: 718 CLITDYCPGGEL--FLLLDRQPTKVLKEDAVRF-------------------YAAEVVVA 756
LI +YC G+L +L R+ + + +A +V
Sbjct: 125 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKG 184
Query: 757 LEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQ 816
+E+L + ++RDL NVL+ V + DF L+ + + + R +
Sbjct: 185 MEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLA--------RDIMSDSNYVVRGNAR- 235
Query: 817 NPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRG-K 874
P++ ++APE + +T D W+ GILL+E+ G P+ G
Sbjct: 236 ------LPVK----------WMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279
Query: 875 TRQKTFANILH-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+ I + + P ++ +M D + R
Sbjct: 280 VDANFYKLIQNGFKMDQPFYATEEIY--IIMQSCWAFDSRKR 319
|
| >3kx0_X Uncharacterized protein RV1364C/MT1410; PAS domain, sensory domain, mycobacteium tuberculos molecule binding domain; 2.30A {Mycobacterium tuberculosis} Length = 185 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 7e-04
Identities = 12/125 (9%), Positives = 40/125 (32%), Gaps = 9/125 (7%)
Query: 497 IIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDN-----QTDVTVQLI 551
+ + ++ + + +G+ R + + ++ +Q
Sbjct: 60 FVAVNAAYRGFSP--LLDTVGQPAREVYPELEGQQIYEMLDRVYQTGEPQSGSEWRLQTD 117
Query: 552 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQ 611
++ + F + P R G ++ + D + + + + EA EE + +
Sbjct: 118 YDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVRARQAA--EARVEELSERYRN 175
Query: 612 TAENV 616
++
Sbjct: 176 VRDSA 180
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 975 | |||
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 3ewk_A | 227 | Sensor protein; PAS domain, alpha/beta fold, kinas | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 99.98 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 99.98 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.97 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 99.97 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.97 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.9 | |
| 4f3l_A | 361 | Mclock, circadian locomoter output cycles protein | 99.82 | |
| 4f3l_B | 387 | BMAL1B; BHLH, PAS, circadian rhythm proteins, tran | 99.81 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.8 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.79 | |
| 2gj3_A | 120 | Nitrogen fixation regulatory protein; PAS domain, | 99.78 | |
| 2gj3_A | 120 | Nitrogen fixation regulatory protein; PAS domain, | 99.77 | |
| 4hia_A | 176 | LOV protein; PAS, HTH, signaling protein; HET: FMN | 99.75 | |
| 1n9l_A | 109 | PHOT-LOV1, putative blue light receptor; phototrop | 99.74 | |
| 2pr5_A | 132 | Blue-light photoreceptor; light-oxygen-voltage, LO | 99.74 | |
| 1n9l_A | 109 | PHOT-LOV1, putative blue light receptor; phototrop | 99.73 | |
| 2pr5_A | 132 | Blue-light photoreceptor; light-oxygen-voltage, LO | 99.72 | |
| 4hia_A | 176 | LOV protein; PAS, HTH, signaling protein; HET: FMN | 99.72 | |
| 3rty_A | 339 | Period circadian protein; PAS domain, signalling, | 99.71 | |
| 3ue6_A | 166 | Aureochrome1; PAS/LOV domain, FMN-binding blue-lig | 99.71 | |
| 3f1p_B | 121 | ARYL hydrocarbon receptor nuclear translocator; PA | 99.69 | |
| 3p7n_A | 258 | Sensor histidine kinase; LOV domain, light-activat | 99.69 | |
| 3ewk_A | 227 | Sensor protein; PAS domain, alpha/beta fold, kinas | 99.69 | |
| 3p7n_A | 258 | Sensor histidine kinase; LOV domain, light-activat | 99.69 | |
| 3ue6_A | 166 | Aureochrome1; PAS/LOV domain, FMN-binding blue-lig | 99.67 | |
| 3mr0_A | 142 | Sensory box histidine kinase/response regulator; P | 99.67 | |
| 3f1p_B | 121 | ARYL hydrocarbon receptor nuclear translocator; PA | 99.66 | |
| 3mr0_A | 142 | Sensory box histidine kinase/response regulator; P | 99.66 | |
| 3f1p_A | 117 | Endothelial PAS domain-containing protein 1; PAS d | 99.65 | |
| 3t50_A | 128 | Blue-light-activated histidine kinase; PAS superfa | 99.65 | |
| 3t50_A | 128 | Blue-light-activated histidine kinase; PAS superfa | 99.65 | |
| 4eet_B | 115 | Phototropin-2; LOV, blue light photoreceptor, sign | 99.64 | |
| 1d06_A | 130 | Nitrogen fixation regulatory protein FIXL; oxygen | 99.64 | |
| 1d06_A | 130 | Nitrogen fixation regulatory protein FIXL; oxygen | 99.64 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.63 | |
| 3mqq_A | 120 | Transcriptional regulator, LUXR family; PAS domain | 99.63 | |
| 3f1p_A | 117 | Endothelial PAS domain-containing protein 1; PAS d | 99.62 | |
| 4eet_B | 115 | Phototropin-2; LOV, blue light photoreceptor, sign | 99.62 | |
| 2r78_A | 117 | Sensor protein; sensory box sensor histidine kinas | 99.62 | |
| 3sw1_A | 162 | Sensory box protein; light-oxygen-voltage, LOV, PA | 99.61 | |
| 2vv6_A | 119 | FIXL, sensor protein FIXL; signaling protein, tran | 99.61 | |
| 3mqq_A | 120 | Transcriptional regulator, LUXR family; PAS domain | 99.61 | |
| 2v0u_A | 146 | NPH1-1, LOV2; kinase, transferase, ATP-binding, se | 99.61 | |
| 3nja_A | 125 | Probable ggdef family protein; structural genomics | 99.6 | |
| 2z6d_A | 130 | Phototropin-2; PAS-fold, LOV-fold, alternative spl | 99.6 | |
| 2r78_A | 117 | Sensor protein; sensory box sensor histidine kinas | 99.6 | |
| 3k3c_A | 158 | Protein RV1364C/MT1410; sensor, PAS, signal transd | 99.6 | |
| 3nja_A | 125 | Probable ggdef family protein; structural genomics | 99.59 | |
| 2z6d_A | 130 | Phototropin-2; PAS-fold, LOV-fold, alternative spl | 99.59 | |
| 2vv6_A | 119 | FIXL, sensor protein FIXL; signaling protein, tran | 99.59 | |
| 3lyx_A | 124 | Sensory BOX/ggdef domain protein; structural genom | 99.58 | |
| 3mxq_A | 152 | Sensor protein; PSI2, MCSG, structural genomics, p | 99.57 | |
| 2wkq_A | 332 | NPH1-1, RAS-related C3 botulinum toxin substrate 1 | 99.57 | |
| 3lyx_A | 124 | Sensory BOX/ggdef domain protein; structural genom | 99.56 | |
| 3bwl_A | 126 | Sensor protein; structural genomics, APC87707.1, P | 99.55 | |
| 3h9w_A | 115 | Diguanylate cyclase with PAS/PAC sensor; alpha-bet | 99.55 | |
| 3kx0_X | 185 | Uncharacterized protein RV1364C/MT1410; PAS domain | 99.55 | |
| 2wkq_A | 332 | NPH1-1, RAS-related C3 botulinum toxin substrate 1 | 99.54 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.54 | |
| 3luq_A | 114 | Sensor protein; PAS, histidine, kinase, PSI, MCSG, | 99.53 | |
| 3sw1_A | 162 | Sensory box protein; light-oxygen-voltage, LOV, PA | 99.53 | |
| 4dj3_A | 317 | Period circadian protein homolog 3; PAS domain, ci | 99.53 | |
| 3bwl_A | 126 | Sensor protein; structural genomics, APC87707.1, P | 99.52 | |
| 3k3c_A | 158 | Protein RV1364C/MT1410; sensor, PAS, signal transd | 99.52 | |
| 3h9w_A | 115 | Diguanylate cyclase with PAS/PAC sensor; alpha-bet | 99.52 | |
| 3luq_A | 114 | Sensor protein; PAS, histidine, kinase, PSI, MCSG, | 99.51 | |
| 3mxq_A | 152 | Sensor protein; PSI2, MCSG, structural genomics, p | 99.51 | |
| 2kdk_A | 121 | ARYL hydrocarbon receptor nuclear translocator-LI | 99.51 | |
| 3kx0_X | 185 | Uncharacterized protein RV1364C/MT1410; PAS domain | 99.5 | |
| 3eeh_A | 125 | Putative light and redox sensing histidine kinase; | 99.48 | |
| 2v0u_A | 146 | NPH1-1, LOV2; kinase, transferase, ATP-binding, se | 99.47 | |
| 3icy_A | 118 | Sensor protein; sensory box histidine kinase/respo | 99.47 | |
| 2kdk_A | 121 | ARYL hydrocarbon receptor nuclear translocator-LI | 99.47 | |
| 3olo_A | 118 | Two-component sensor histidine kinase; structural | 99.47 | |
| 1byw_A | 110 | Protein (human ERG potassium channel); PAS domain, | 99.46 | |
| 3icy_A | 118 | Sensor protein; sensory box histidine kinase/respo | 99.46 | |
| 3olo_A | 118 | Two-component sensor histidine kinase; structural | 99.45 | |
| 3eeh_A | 125 | Putative light and redox sensing histidine kinase; | 99.45 | |
| 1byw_A | 110 | Protein (human ERG potassium channel); PAS domain, | 99.45 | |
| 4dj2_A | 320 | Period circadian protein homolog 1; PAS domains, c | 99.45 | |
| 2l0w_A | 138 | Potassium voltage-gated channel, subfamily H (EAG | 99.44 | |
| 1v9y_A | 167 | Heme PAS sensor protein; signaling protein; HET: H | 99.44 | |
| 3gdi_A | 309 | Period circadian protein homolog 2; tandem PAS dom | 99.44 | |
| 3d72_A | 149 | Vivid PAS protein VVD; circadian, photoreceptor, b | 99.43 | |
| 4eho_A | 635 | Bacteriophytochrome, PAS/PAC sensor; photoreceptor | 99.42 | |
| 3mjq_A | 126 | Uncharacterized protein; NESG, structural genomics | 99.42 | |
| 3mjq_A | 126 | Uncharacterized protein; NESG, structural genomics | 99.42 | |
| 3mfx_A | 129 | Sensory BOX/ggdef family protein; alpha-beta prote | 99.41 | |
| 3d72_A | 149 | Vivid PAS protein VVD; circadian, photoreceptor, b | 99.4 | |
| 1v9y_A | 167 | Heme PAS sensor protein; signaling protein; HET: H | 99.4 | |
| 2l0w_A | 138 | Potassium voltage-gated channel, subfamily H (EAG | 99.4 | |
| 3vol_A | 233 | Aerotaxis transducer AER2; heme, oxygen sensor pro | 99.39 | |
| 3mfx_A | 129 | Sensory BOX/ggdef family protein; alpha-beta prote | 99.36 | |
| 4eho_A | 635 | Bacteriophytochrome, PAS/PAC sensor; photoreceptor | 99.34 | |
| 4hi4_A | 121 | Aerotaxis transducer AER2; PAS domain, diatomic GA | 99.27 | |
| 2qkp_A | 151 | Uncharacterized protein; structural genomics, unkn | 99.26 | |
| 3fc7_A | 125 | HTR-like protein, sensor protein; APC87712.1, HTR- | 99.25 | |
| 4hi4_A | 121 | Aerotaxis transducer AER2; PAS domain, diatomic GA | 99.22 | |
| 3vol_A | 233 | Aerotaxis transducer AER2; heme, oxygen sensor pro | 99.21 | |
| 3fg8_A | 118 | Uncharacterized protein RHA05790; PAS domain, stru | 99.21 | |
| 3fg8_A | 118 | Uncharacterized protein RHA05790; PAS domain, stru | 99.21 | |
| 3fc7_A | 125 | HTR-like protein, sensor protein; APC87712.1, HTR- | 99.21 | |
| 2vlg_A | 111 | Sporulation kinase A; histidine kinase, two-compon | 99.21 | |
| 4f3l_A | 361 | Mclock, circadian locomoter output cycles protein | 99.2 | |
| 3a0r_A | 349 | Sensor protein; four helix bundle, PAS fold, kinas | 99.2 | |
| 2vlg_A | 111 | Sporulation kinase A; histidine kinase, two-compon | 99.19 | |
| 3b33_A | 115 | Sensor protein; structural genomics, PAS domain, n | 99.18 | |
| 2qkp_A | 151 | Uncharacterized protein; structural genomics, unkn | 99.17 | |
| 3b33_A | 115 | Sensor protein; structural genomics, PAS domain, n | 99.15 | |
| 4f3l_B | 387 | BMAL1B; BHLH, PAS, circadian rhythm proteins, tran | 99.12 | |
| 1ll8_A | 114 | PAS kinase; PAS domain, ligand binding, ligand scr | 99.11 | |
| 1ll8_A | 114 | PAS kinase; PAS domain, ligand binding, ligand scr | 99.08 | |
| 2w0n_A | 118 | Sensor protein DCUS; signal transduction, two-comp | 99.03 | |
| 3cax_A | 369 | Uncharacterized protein PF0695; structural genomic | 99.0 | |
| 2ykf_A | 305 | Pdtas, probable sensor histidine kinase pdtas; tra | 98.55 | |
| 3a0r_A | 349 | Sensor protein; four helix bundle, PAS fold, kinas | 98.97 | |
| 1mzu_A | 129 | PPR; photoactive yellow protein, PAS, PYP, signali | 98.97 | |
| 3a0s_A | 96 | Sensor protein; PAS-fold, kinase, phosphoprotein, | 98.95 | |
| 1nwz_A | 125 | PYP, photoactive yellow protein; PAS, LOV, GAF, do | 98.94 | |
| 3cax_A | 369 | Uncharacterized protein PF0695; structural genomic | 98.92 | |
| 2w0n_A | 118 | Sensor protein DCUS; signal transduction, two-comp | 98.91 | |
| 3a0s_A | 96 | Sensor protein; PAS-fold, kinase, phosphoprotein, | 98.89 | |
| 2jhe_A | 190 | Transcription regulator TYRR; aromatic hydrocarbon | 98.82 | |
| 2jhe_A | 190 | Transcription regulator TYRR; aromatic hydrocarbon | 98.81 | |
| 1nwz_A | 125 | PYP, photoactive yellow protein; PAS, LOV, GAF, do | 98.79 | |
| 3rty_A | 339 | Period circadian protein; PAS domain, signalling, | 98.77 | |
| 1mzu_A | 129 | PPR; photoactive yellow protein, PAS, PYP, signali | 98.76 | |
| 2ykf_A | 305 | Pdtas, probable sensor histidine kinase pdtas; tra | 98.19 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 98.67 | |
| 4dj3_A | 317 | Period circadian protein homolog 3; PAS domain, ci | 98.61 | |
| 3gdi_A | 309 | Period circadian protein homolog 2; tandem PAS dom | 98.53 | |
| 4dj2_A | 320 | Period circadian protein homolog 1; PAS domains, c | 98.5 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 98.42 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 98.27 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.18 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 97.78 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 97.45 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 97.35 | |
| 1oj5_A | 132 | Steroid receptor coactivator 1A; transcriptional c | 97.11 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 97.1 | |
| 1oj5_A | 132 | Steroid receptor coactivator 1A; transcriptional c | 96.96 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 96.82 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 96.81 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 96.62 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 96.32 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 96.02 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 95.68 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 95.65 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 94.4 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 93.92 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 93.35 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 92.14 | |
| 3g15_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 88.49 | |
| 2ool_A | 337 | Sensor protein; bacteriophytochrome, photoconversi | 86.87 | |
| 2ool_A | 337 | Sensor protein; bacteriophytochrome, photoconversi | 83.48 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 80.14 | |
| 1p0z_A | 131 | Sensor kinase CITA; transferase; HET: FLC MO7; 1.6 | 80.03 |
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-53 Score=468.83 Aligned_cols=252 Identities=35% Similarity=0.619 Sum_probs=222.1
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEE
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCL 719 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~l 719 (975)
..++|++++.||+|+||+||+|+++.+|+.||||++.+..+ .....+.+++||
T Consensus 30 ~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yi 109 (311)
T 4aw0_A 30 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYF 109 (311)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred CccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 45689999999999999999999999999999999976432 122237889999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
|||||+||+|.+++.+. +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+.+....
T Consensus 110 vmEy~~gG~L~~~i~~~--~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~- 186 (311)
T 4aw0_A 110 GLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES- 186 (311)
T ss_dssp EECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT-
T ss_pred EEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC-
Confidence 99999999999999875 569999999999999999999999999999999999999999999999999997654211
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
......+++||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+..++
T Consensus 187 ------------------------~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~ 242 (311)
T 4aw0_A 187 ------------------------KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLI 242 (311)
T ss_dssp ------------------------TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred ------------------------CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 11233567999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChh--hHHHHHcCCCccCCCcchhhccCCCCC
Q 002051 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE--GANEIKKHPFFKGVNWALVRCMNPPEL 947 (975)
Q Consensus 880 ~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~--~~~elL~Hp~f~~~~~~~~~~~~~~~~ 947 (975)
+.++.+..+.+|. .+|+++++||.+||++||.+|||+.+ ...+|++||||++++|..++...||.+
T Consensus 243 ~~~i~~~~~~~p~--~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~l~~~~pP~l 310 (311)
T 4aw0_A 243 FAKIIKLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310 (311)
T ss_dssp HHHHHHTCCCCCT--TCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGGGSCCCCC
T ss_pred HHHHHcCCCCCCc--ccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCHHHhcCCCCCCC
Confidence 9999998887775 47999999999999999999999654 245689999999999999988877754
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-52 Score=455.06 Aligned_cols=246 Identities=41% Similarity=0.749 Sum_probs=213.9
Q ss_pred ccCCCcccccccccCCceEEEEEEEe---CCCeEEEEEEeccchh--------------------------ccccccCCe
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVM--------------------------LNRNKTKTH 716 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~---~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~ 716 (975)
++.++|++++.||+|+||+||+|++. .+++.||||++++... .....+.++
T Consensus 21 ~~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 100 (304)
T 3ubd_A 21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGK 100 (304)
T ss_dssp CCGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTE
T ss_pred CCccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCE
Confidence 44568999999999999999999985 4688999999875421 122236788
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
+|||||||+||+|.+++.+. +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+....
T Consensus 101 ~~ivmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 101 LYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EEEEECCCTTCEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEEEEEcCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 99999999999999999875 5699999999999999999999999999999999999999999999999999965321
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 876 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~ 876 (975)
. .....+.+||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+.
T Consensus 179 ~---------------------------~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~ 231 (304)
T 3ubd_A 179 H---------------------------EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR 231 (304)
T ss_dssp -----------------------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred C---------------------------CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH
Confidence 1 1123457899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhcc
Q 002051 877 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCM 942 (975)
Q Consensus 877 ~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~~ 942 (975)
.+++.++.+..+.+|. .+|+++++||++||++||++|||+. ..++||++||||+++||..+...
T Consensus 232 ~~~~~~i~~~~~~~p~--~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw~~l~~~ 296 (304)
T 3ubd_A 232 KETMTMILKAKLGMPQ--FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRR 296 (304)
T ss_dssp HHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCHHHHHTT
T ss_pred HHHHHHHHcCCCCCCC--cCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCCCHHHHHhC
Confidence 9999999998877664 4799999999999999999999954 35799999999999999988543
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-54 Score=512.42 Aligned_cols=416 Identities=27% Similarity=0.451 Sum_probs=262.6
Q ss_pred eeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEccCCcEEEEEEEEeeeecCCCCE
Q 002051 497 IIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEV 576 (975)
Q Consensus 497 I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~i 576 (975)
-+.+|.++.+..+++.++..|+....+..|+.. ....+++.+.......++..+..+-|..+|-.+...+..+..+.+
T Consensus 6 ~i~a~~~~l~a~~~~~~~~~~~~~~~~~~p~~~--~~~~~~~~~~~~~~~~~~~i~~q~ig~~~f~~f~~~~~~~~~~~~ 83 (689)
T 3v5w_A 6 AVLADVSYLMAMEKSKATPAARASKKILLPEPS--IRSVMQKYLEDRGEVTFEKIFSQKLGYLLFRDFCLNHLEEARPLV 83 (689)
T ss_dssp ------------------------CCCCCCCTT--HHHHHHHHHHHTTCCSHHHHHTSHHHHHHHHHHHHHHCGGGHHHH
T ss_pred hhHhhHHHHHHhccCCCCcchhhhhhhhCCCch--HHHHHHHHHhhccccccceecCccHHHHHHHHHhcCcchhhhHHH
Confidence 568999999999999999999988777766643 234466666655443333323344566655554434443332222
Q ss_pred EEEEEEeecCCcccccccCCCcchhhHH-HHHH-HHHH-------hhhhhhhhhcCCCCCCCcchhccccccccCCC---
Q 002051 577 QYFIGVQLDGSEHLEPLRNSIPEATAEE-SEKL-VKQT-------AENVNEAVKELPDANLTPEDLWANHSKVVHPK--- 644 (975)
Q Consensus 577 ~~~v~i~rDITerk~~e~~~~~~~~~~e-~~~~-v~~~-------~~~i~~~v~~l~~~n~~pe~l~an~s~~~~~~--- 644 (975)
. +..||.+=...+....+.....+ ..+. .+.. ...+...+.+....+..|.+++....+.+...
T Consensus 84 ~----~~~~v~~~~~~~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~l~~ 159 (689)
T 3v5w_A 84 E----FYEEIKKYEKLETEEERVARSREIFDSYIMKELLACSHPFSKSATEHVQGHLGKKQVPPDLFQPYIEEICQNLRG 159 (689)
T ss_dssp H----HHHHHHHHHTCCSHHHHHHHHHHHHTSHHHHHHHSSSSCCCHHHHHHHHHHHHTTCCCTTTTHHHHHHHHHHHTT
T ss_pred H----HHHHHHhhhccCchhhHHHHHHHHHHHhcchhhhhccCccchHHHHHHHHhhhhccCChHHHHHHHHHHHHHhcc
Confidence 2 22333221000000000000000 0000 1111 01111222223333445566665444332211
Q ss_pred -CCCCC--CC--chHHHHhhhcccccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh------------
Q 002051 645 -PHRKD--SP--PWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM------------ 707 (975)
Q Consensus 645 -p~~~~--~~--~~~~~~~~~~~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~------------ 707 (975)
|.... ++ .+....+.+.....+.+++|++++.||+|+||+||+|+++.+|+.||||++++..+
T Consensus 160 ~~f~~~~~s~~~~r~~q~k~~e~~~~~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E 239 (689)
T 3v5w_A 160 DVFQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNE 239 (689)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHHTTCCCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHH
T ss_pred CcccccccChhHHHHHhccccccCCCCchHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHH
Confidence 10000 00 00111122333446778999999999999999999999999999999999976431
Q ss_pred ------------------ccccccCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecC
Q 002051 708 ------------------LNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRD 769 (975)
Q Consensus 708 ------------------~~~~~~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrD 769 (975)
...+.+..++|||||||+||+|+++|.+. +.+++..++.|+.||+.||+|||++||||||
T Consensus 240 ~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~~~--~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRD 317 (689)
T 3v5w_A 240 RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNRFVVYRD 317 (689)
T ss_dssp HHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHTTTEECCC
T ss_pred HHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence 11223678999999999999999999875 5699999999999999999999999999999
Q ss_pred CCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhc-CCCC
Q 002051 770 LKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGH 848 (975)
Q Consensus 770 IKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-~~~~ 848 (975)
|||+|||++.+|++||+|||+|+.+.. ....+.+||+.|||||++. +..|
T Consensus 318 LKPeNILld~~G~vKL~DFGlA~~~~~-----------------------------~~~~t~~GTp~YmAPEvl~~~~~y 368 (689)
T 3v5w_A 318 LKPANILLDEHGHVRISDLGLACDFSK-----------------------------KKPHASVGTHGYMAPEVLQKGVAY 368 (689)
T ss_dssp CSGGGEEECTTSCEEECCCTTCEECSS-----------------------------CCCCSCCSCGGGCCHHHHSTTCCC
T ss_pred CchHHeEEeCCCCEEecccceeeecCC-----------------------------CCCCCccCCcCccCHHHHhCCCCC
Confidence 999999999999999999999965431 1224579999999999996 4679
Q ss_pred CChhHHHHHHHHHHHHHhCCCCCCCC---CHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHH
Q 002051 849 TSAVDWWALGILLYEMLYGYTPFRGK---TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANE 924 (975)
Q Consensus 849 ~~k~DIWSLG~il~ell~G~~Pf~~~---~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~e 924 (975)
+.++|||||||++|+|++|.+||.+. +...+...+......+|. .+|+++++||.+||++||.+|+++. ..++|
T Consensus 369 ~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p~--~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~e 446 (689)
T 3v5w_A 369 DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD--SFSPELRSLLEGLLQRDVNRRLGCLGRGAQE 446 (689)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSCGGGCTTCSSSTHHH
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCc--cCCHHHHHHHHHHccCCHhHCCCCCCCCHHH
Confidence 99999999999999999999999763 344566677777766664 4899999999999999999999853 46899
Q ss_pred HHcCCCccCCCcchhhc--cCCCCCCCCCcc
Q 002051 925 IKKHPFFKGVNWALVRC--MNPPELDAPLFA 953 (975)
Q Consensus 925 lL~Hp~f~~~~~~~~~~--~~~~~~~~p~~~ 953 (975)
|++||||+++||..+.. ..+|- .|...
T Consensus 447 i~~HpfF~~idW~~l~~~~~~pP~--~P~~~ 475 (689)
T 3v5w_A 447 VKESPFFRSLDWQMVFLQKYPPPL--IPPRG 475 (689)
T ss_dssp HTTSGGGTTCCHHHHHTTCSCCSC--CCCTT
T ss_pred HhcCccccCCCHHHHHcCCCCcCc--cCCCC
Confidence 99999999999998854 44443 46443
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-50 Score=452.82 Aligned_cols=235 Identities=25% Similarity=0.485 Sum_probs=202.6
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------------------hccccccCCeEEEE
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------------------MLNRNKTKTHVCLI 720 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------------~~~~~~~~~~~~lV 720 (975)
.+++|+++++||+|+||+||+|+++.+|+.||||++++.. ++....+.+++|||
T Consensus 22 sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 4679999999999999999999999999999999997542 12223377899999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 800 (975)
||||+||+|.++|.......+++..++.|+.||+.||+|||++|||||||||+|||++.+|.+||+|||+|+.....
T Consensus 102 mEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~--- 178 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST--- 178 (350)
T ss_dssp EECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH---
T ss_pred EeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCC---
Confidence 99999999999998766677899999999999999999999999999999999999999999999999999764311
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~ 880 (975)
.......+||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+..+++
T Consensus 179 ------------------------~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~ 234 (350)
T 4b9d_A 179 ------------------------VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV 234 (350)
T ss_dssp ------------------------HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred ------------------------cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH
Confidence 01123568999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 881 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 881 ~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
.++..+.++ +....+|.++++||.+||++||++||| ++|+|+||||+.
T Consensus 235 ~~i~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~R~s----~~e~l~hp~~~~ 282 (350)
T 4b9d_A 235 LKIISGSFP-PVSLHYSYDLRSLVSQLFKRNPRDRPS----VNSILEKGFIAK 282 (350)
T ss_dssp HHHHHTCCC-CCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHTSHHHHT
T ss_pred HHHHcCCCC-CCCccCCHHHHHHHHHHccCChhHCcC----HHHHhcCHHhhc
Confidence 999987654 334568999999999999999999999 999999999975
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-50 Score=445.46 Aligned_cols=232 Identities=31% Similarity=0.485 Sum_probs=204.4
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEEec
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITDY 723 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~Ey 723 (975)
.+.|+++++||+|+||+||+|+++.+|+.||||++++.. ++....+.+++||||||
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 152 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 357999999999999999999999999999999986542 12223367899999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
|+||+|.+++.+ +.+++..++.|+.||+.||+|||++|||||||||+|||++.+|.+||+|||+|+.+...
T Consensus 153 ~~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~------ 223 (346)
T 4fih_A 153 LEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE------ 223 (346)
T ss_dssp CTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSS------
T ss_pred CCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCC------
Confidence 999999999986 45999999999999999999999999999999999999999999999999999764321
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i 883 (975)
.....+.+||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+..+.+..+
T Consensus 224 ---------------------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i 282 (346)
T 4fih_A 224 ---------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 282 (346)
T ss_dssp ---------------------SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred ---------------------CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH
Confidence 11234679999999999999999999999999999999999999999999999988888
Q ss_pred HhcCC-CCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 884 LHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 884 ~~~~~-~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
..... .++....+|+++++||.+||++||++||| ++|+|+||||+.
T Consensus 283 ~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~t----a~e~l~Hp~~~~ 329 (346)
T 4fih_A 283 RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRAT----AAELLKHPFLAK 329 (346)
T ss_dssp HHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCC----HHHHTTCGGGGG
T ss_pred HcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcC----HHHHhcCHhhcC
Confidence 76543 33444568999999999999999999999 999999999974
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-49 Score=428.96 Aligned_cols=228 Identities=32% Similarity=0.535 Sum_probs=190.8
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLI 720 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV 720 (975)
.++|++++.||+|+||+||+|+++.+|+.||||++++..+ .....+.+++|||
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 3689999999999999999999999999999999875421 1222377899999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 800 (975)
|||| +|+|.+++.+. +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.....
T Consensus 92 mEy~-~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~--- 165 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--- 165 (275)
T ss_dssp EECC-CEEHHHHHHHS--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC---------
T ss_pred EeCC-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCC---
Confidence 9999 78999999875 56999999999999999999999999999999999999999999999999999654311
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCC-CChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
....+.+||+.|||||++.+..| +.++|||||||++|+|++|++||.+.+...+
T Consensus 166 -------------------------~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~ 220 (275)
T 3hyh_A 166 -------------------------NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL 220 (275)
T ss_dssp ----------------------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred -------------------------CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHH
Confidence 12235689999999999998876 5799999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCcc
Q 002051 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932 (975)
Q Consensus 880 ~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~ 932 (975)
+..+..+.+.+|. .+|+++++||.+||++||++||| ++|+|+||||+
T Consensus 221 ~~~i~~~~~~~p~--~~s~~~~~li~~~L~~dP~~R~s----~~eil~hpw~k 267 (275)
T 3hyh_A 221 FKNISNGVYTLPK--FLSPGAAGLIKRMLIVNPLNRIS----IHEIMQDDWFK 267 (275)
T ss_dssp HHHHHHTCCCCCT--TSCHHHHHHHHHHSCSSGGGSCC----HHHHHHCHHHH
T ss_pred HHHHHcCCCCCCC--CCCHHHHHHHHHHccCChhHCcC----HHHHHcCcccc
Confidence 9999988877764 47999999999999999999999 99999999996
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-49 Score=448.23 Aligned_cols=232 Identities=31% Similarity=0.485 Sum_probs=205.0
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEEec
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITDY 723 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~Ey 723 (975)
.+.|+++++||+|+||.||+|+++.+|+.||||++.+.. ++..+.+.+++||||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 457999999999999999999999999999999986542 12233367899999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
|+||+|.+++.. +.+++..++.|+.||+.||+|||++|||||||||+|||++.+|.+||+|||+|+.+...
T Consensus 230 ~~gG~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~------ 300 (423)
T 4fie_A 230 LEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE------ 300 (423)
T ss_dssp CTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSS------
T ss_pred CCCCcHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCC------
Confidence 999999999976 45999999999999999999999999999999999999999999999999999764321
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i 883 (975)
.....+.+||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+..+.+..+
T Consensus 301 ---------------------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i 359 (423)
T 4fie_A 301 ---------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 359 (423)
T ss_dssp ---------------------CCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred ---------------------CccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH
Confidence 11234679999999999999999999999999999999999999999999999988888
Q ss_pred HhcCC-CCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 884 LHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 884 ~~~~~-~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
..... .++....+|+++++||.+||++||++||| +.|||+||||+.
T Consensus 360 ~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~t----a~ell~Hp~~~~ 406 (423)
T 4fie_A 360 RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRAT----AAELLKHPFLAK 406 (423)
T ss_dssp HHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCC----HHHHTTCGGGGG
T ss_pred HcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcC----HHHHhcCHHhcC
Confidence 77543 34445678999999999999999999999 999999999974
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-48 Score=433.03 Aligned_cols=240 Identities=24% Similarity=0.362 Sum_probs=202.3
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-------------------ccccccCCeEEEEEeccCCC
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-------------------LNRNKTKTHVCLITDYCPGG 727 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-------------------~~~~~~~~~~~lV~Ey~~gg 727 (975)
..+.|++.++||+|+||+||+|+++.+|+.||||++++... +....+..++|||||||+||
T Consensus 56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg 135 (336)
T 4g3f_A 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGG 135 (336)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTC
T ss_pred chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCC
Confidence 45679999999999999999999999999999999976532 22223678899999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC-cEEEeeccCCCccCCCCCCCCCcch
Q 002051 728 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKPQLLLPTTN 806 (975)
Q Consensus 728 sL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g-~vkL~DFG~a~~~~~~~~~~~~~~~ 806 (975)
+|.+++.+. +.+++..++.|+.||+.||+|||++|||||||||+|||++.+| .+||+|||+|+.+.....
T Consensus 136 ~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~------- 206 (336)
T 4g3f_A 136 SLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL------- 206 (336)
T ss_dssp BHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCc-------
Confidence 999999875 5699999999999999999999999999999999999999887 699999999976542110
Q ss_pred hhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 002051 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 886 (975)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~ 886 (975)
.........++||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+...++.++...
T Consensus 207 ---------------~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~ 271 (336)
T 4g3f_A 207 ---------------GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASE 271 (336)
T ss_dssp ----------------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHS
T ss_pred ---------------ccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcC
Confidence 00111234578999999999999999999999999999999999999999998888888888887
Q ss_pred CCCCC-CCCCCcHHHHHHHHHhcccCccccCCChhhHHHH-------------HcCCCccCC
Q 002051 887 DLKFP-SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI-------------KKHPFFKGV 934 (975)
Q Consensus 887 ~~~~p-~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~el-------------L~Hp~f~~~ 934 (975)
..+++ .+..+++.+.+||.+||++||.+||| +.|| |+|||+...
T Consensus 272 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s----a~el~~~l~~~l~~~~~l~hPw~~~~ 329 (336)
T 4g3f_A 272 PPPIREIPPSCAPLTAQAIQEGLRKEPVHRAS----AMELRRKVGKALQEVGGLKSPWKGEY 329 (336)
T ss_dssp CCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHHHHHHHHHTTSSCSCSSSSC
T ss_pred CCCchhcCccCCHHHHHHHHHHccCCHhHCcC----HHHHHHHHHHHHhhhhhccCCCcCCC
Confidence 65433 23568999999999999999999999 7776 579998765
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-47 Score=418.41 Aligned_cols=229 Identities=22% Similarity=0.352 Sum_probs=189.6
Q ss_pred CCc-ccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc--------------------------ccc----ccCCeE
Q 002051 669 QHF-RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--------------------------NRN----KTKTHV 717 (975)
Q Consensus 669 ~~y-~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~--------------------------~~~----~~~~~~ 717 (975)
++| ++.++||+|+||+||+|.++.+++.||+|++.+.... ... ....++
T Consensus 25 gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~ 104 (290)
T 3fpq_A 25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 104 (290)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEE
Confidence 344 7788999999999999999999999999998654211 100 124568
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEEec-CCcEEEeeccCCCcc
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQG-NGHVSLTDFDLSCLT 794 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~g--IiHrDIKp~NILl~~-~g~vkL~DFG~a~~~ 794 (975)
|||||||+||+|.+++.+. +.+++..++.++.||+.||+|||++| ||||||||+|||++. +|.+||+|||+|+..
T Consensus 105 ~lvmEy~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~ 182 (290)
T 3fpq_A 105 VLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence 9999999999999999874 56999999999999999999999998 999999999999984 789999999999642
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCC
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 874 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~ 874 (975)
.. ....+.+||+.|||||++.+ .|+.++|||||||++|+|++|++||.+.
T Consensus 183 ~~-----------------------------~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~ 232 (290)
T 3fpq_A 183 RA-----------------------------SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSEC 232 (290)
T ss_dssp CT-----------------------------TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred CC-----------------------------CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 21 12235689999999999876 5999999999999999999999999876
Q ss_pred CHHHHH-HHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 875 TRQKTF-ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 875 ~~~~~~-~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
+....+ ..+..+..+.......++++++||.+||++||++||| ++|+|+||||+.
T Consensus 233 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s----~~e~l~Hp~~~~ 288 (290)
T 3fpq_A 233 QNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYS----IKDLLNHAFFQE 288 (290)
T ss_dssp SSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCC----HHHHHTSGGGC-
T ss_pred CcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcC----HHHHhcCccccC
Confidence 554444 4444443333333457889999999999999999999 999999999974
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-47 Score=432.86 Aligned_cols=239 Identities=25% Similarity=0.382 Sum_probs=198.7
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------cc------ccccCCe
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LN------RNKTKTH 716 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~------~~~~~~~ 716 (975)
++|++++.||+|+||+||+|+++.+|+.||||++++... .. ...+..+
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 579999999999999999999999999999999865320 00 0113468
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
+||||||| +|+|.+++... +.+++..++.|++||+.||.|||++|||||||||+|||++.+|.+||+|||+|+.+..
T Consensus 134 ~~ivmE~~-~g~L~~~i~~~--~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~ 210 (398)
T 4b99_A 134 VYVVLDLM-ESDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCT 210 (398)
T ss_dssp EEEEEECC-SEEHHHHHTSS--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC--
T ss_pred EEEEEeCC-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeeccc
Confidence 99999999 57899999764 6799999999999999999999999999999999999999999999999999976532
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
... .......+.+||+.|||||++.+. .|+.++||||+||++|+|++|++||.+.+
T Consensus 211 ~~~-----------------------~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~ 267 (398)
T 4b99_A 211 SPA-----------------------EHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN 267 (398)
T ss_dssp ----------------------------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSS
T ss_pred Ccc-----------------------ccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCC
Confidence 110 011233467999999999999875 46899999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCC--------------------C---------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 876 RQKTFANILHKDLKFP--------------------S---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 876 ~~~~~~~i~~~~~~~p--------------------~---------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
..+++..|......++ . ...++.++++||.+||++||.+||| ++|+|
T Consensus 268 ~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t----a~e~L 343 (398)
T 4b99_A 268 YVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARIS----AAAAL 343 (398)
T ss_dssp HHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCC----HHHHT
T ss_pred HHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcC----HHHHh
Confidence 9998888865322111 0 1246889999999999999999999 99999
Q ss_pred cCCCccCCCcc
Q 002051 927 KHPFFKGVNWA 937 (975)
Q Consensus 927 ~Hp~f~~~~~~ 937 (975)
+||||+.....
T Consensus 344 ~Hp~f~~~~~p 354 (398)
T 4b99_A 344 RHPFLAKYHDP 354 (398)
T ss_dssp TSGGGTTTCCG
T ss_pred cCHhhCcCCCC
Confidence 99999987554
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-46 Score=419.65 Aligned_cols=259 Identities=26% Similarity=0.374 Sum_probs=189.1
Q ss_pred CCCcccccccccCCceEEEEEEEe---CCCeEEEEEEeccch-----------------------hccccccCCeEEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGV-----------------------MLNRNKTKTHVCLIT 721 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~---~t~~~vAiK~l~~~~-----------------------~~~~~~~~~~~~lV~ 721 (975)
.++|+++++||+|+||+||+|+++ .+++.||||.+.+.. +.....+.+++||||
T Consensus 20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvm 99 (361)
T 4f9c_A 20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAM 99 (361)
T ss_dssp GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEE
T ss_pred cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEE
Confidence 367999999999999999999986 467899999886432 112223678999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC-CcEEEeeccCCCccCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~-g~vkL~DFG~a~~~~~~~~~ 800 (975)
|||+||+|.+++. .+++..++.+++||+.||+|||++||+||||||+|||++.+ +.+||+|||+|+........
T Consensus 100 E~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~ 174 (361)
T 4f9c_A 100 PYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIE 174 (361)
T ss_dssp ECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCG
T ss_pred eCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccc
Confidence 9999999999984 38999999999999999999999999999999999999976 79999999999765432211
Q ss_pred CCCcchhhhhcc-CCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCC-CCHH
Q 002051 801 LLPTTNEKKRRH-KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRG-KTRQ 877 (975)
Q Consensus 801 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~-~~~~ 877 (975)
............ ...................+||+.|||||++.+. .|+.++||||+||++|+|++|++||.. .+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~ 254 (361)
T 4f9c_A 175 LLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDL 254 (361)
T ss_dssp GGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHH
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHH
Confidence 100000000000 0000000001111233457899999999999876 489999999999999999999999854 4455
Q ss_pred HHHHHHHhc--------------------------------------C--------------CCCCCCCCCcHHHHHHHH
Q 002051 878 KTFANILHK--------------------------------------D--------------LKFPSSTPTSLHAKQLMY 905 (975)
Q Consensus 878 ~~~~~i~~~--------------------------------------~--------------~~~p~~~~~s~~~~~li~ 905 (975)
+.+..|... . ...+....+|++++|||+
T Consensus 255 ~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~ 334 (361)
T 4f9c_A 255 TALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLD 334 (361)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHH
T ss_pred HHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHH
Confidence 555444320 0 001122457889999999
Q ss_pred HhcccCccccCCChhhHHHHHcCCCccCCC
Q 002051 906 RLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935 (975)
Q Consensus 906 ~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~ 935 (975)
+||++||.+|+| ++|+|+||||++++
T Consensus 335 ~lL~~dP~~R~t----a~eaL~Hp~f~~i~ 360 (361)
T 4f9c_A 335 KLLDLNPASRIT----AEEALLHPFFKDMS 360 (361)
T ss_dssp HHTCSCTTTSCC----HHHHHTSGGGTTC-
T ss_pred HHCcCChhHCcC----HHHHhcCcccCCCC
Confidence 999999999999 99999999999875
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-46 Score=411.48 Aligned_cols=245 Identities=24% Similarity=0.381 Sum_probs=176.8
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-------------------------cccc------------
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-------------------------LNRN------------ 711 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-------------------------~~~~------------ 711 (975)
++|++++.||+|+||+||+|+++.+|+.||||+++.... ....
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 469999999999999999999999999999999864310 0000
Q ss_pred ccCCeEEEEEeccCCCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccC
Q 002051 712 KTKTHVCLITDYCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 790 (975)
Q Consensus 712 ~~~~~~~lV~Ey~~ggsL~~~l~~~~~-~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~ 790 (975)
....++|||||||+||+|.+++..... ...+...++.++.||+.||+|||++|||||||||+|||++.+|.+||+|||+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGl 164 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL 164 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCcc
Confidence 012357999999999999999986432 2345677899999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCC
Q 002051 791 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 870 (975)
Q Consensus 791 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~P 870 (975)
|+............ ............+||+.|||||++.+..|+.++|||||||++|+|++ |
T Consensus 165 a~~~~~~~~~~~~~---------------~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---P 226 (299)
T 4g31_A 165 VTAMDQDEEEQTVL---------------TPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---P 226 (299)
T ss_dssp C-----------------------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---C
T ss_pred ceecCCCccccccc---------------cccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---C
Confidence 98765322110000 00011122345789999999999999999999999999999999996 7
Q ss_pred CCCCCHH-HHHHHHHhcCCCCCC-CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcc
Q 002051 871 FRGKTRQ-KTFANILHKDLKFPS-STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 937 (975)
Q Consensus 871 f~~~~~~-~~~~~i~~~~~~~p~-~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~ 937 (975)
|.+.... ..+..+... .+|. ....++.+.+||.+||++||.+||| +.|||+||||++++|.
T Consensus 227 f~~~~~~~~~~~~~~~~--~~p~~~~~~~~~~~~li~~~L~~dP~~Rps----~~eil~h~~~~~~~~p 289 (299)
T 4g31_A 227 FSTQMERVRTLTDVRNL--KFPPLFTQKYPCEYVMVQDMLSPSPMERPE----AINIIENAVFEDLDFP 289 (299)
T ss_dssp CSSHHHHHHHHHHHHTT--CCCHHHHHHCHHHHHHHHHHTCSSGGGSCC----HHHHHTSGGGCCC---
T ss_pred CCCccHHHHHHHHHhcC--CCCCCCcccCHHHHHHHHHHcCCChhHCcC----HHHHhcCHhhCCCCCC
Confidence 8653222 223333332 2222 2234567889999999999999999 9999999999999985
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=433.81 Aligned_cols=237 Identities=28% Similarity=0.473 Sum_probs=209.7
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEEec
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITDY 723 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~Ey 723 (975)
+++|++++.||+|+||+||+|+++.+|+.||||++.+.. +...+.+..++||||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 468999999999999999999999999999999986542 12233478899999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC--CcEEEeeccCCCccCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN--GHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~--g~vkL~DFG~a~~~~~~~~~~ 801 (975)
|+||+|+++|... .+.+++..++.++.||+.||.|||++||+||||||+|||++.+ +.+||+|||+|+.+...
T Consensus 236 ~~gg~L~~~i~~~-~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~---- 310 (573)
T 3uto_A 236 MSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK---- 310 (573)
T ss_dssp CCCCBHHHHHTCT-TSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT----
T ss_pred cCCCcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCC----
Confidence 9999999999653 3569999999999999999999999999999999999999854 89999999999765421
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~ 881 (975)
......+||+.|||||++.+..|+.++|||||||++|+|++|.+||.+.+..+.+.
T Consensus 311 ------------------------~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~ 366 (573)
T 3uto_A 311 ------------------------QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLR 366 (573)
T ss_dssp ------------------------SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH
T ss_pred ------------------------CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH
Confidence 12235689999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcc
Q 002051 882 NILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 937 (975)
Q Consensus 882 ~i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~ 937 (975)
++....+.++.. ..+|.++++||++||++||.+||| +.|+|+||||+..+|.
T Consensus 367 ~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t----~~e~l~Hpw~~~~~~~ 420 (573)
T 3uto_A 367 NVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMT----IHQALEHPWLTPGNAP 420 (573)
T ss_dssp HHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHHSTTTSCCCCT
T ss_pred HHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcC----HHHHhcCcCcCCCCCC
Confidence 999887766543 568999999999999999999999 9999999999988875
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-44 Score=405.99 Aligned_cols=262 Identities=35% Similarity=0.673 Sum_probs=214.7
Q ss_pred cccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh----------------------------ccccccC
Q 002051 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM----------------------------LNRNKTK 714 (975)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~----------------------------~~~~~~~ 714 (975)
...+..++|++++.||+|+||.||+|+++.+|+.||||++++... .....+.
T Consensus 17 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~ 96 (353)
T 3txo_A 17 SNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTP 96 (353)
T ss_dssp ------CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred cCCCchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeC
Confidence 345678899999999999999999999999999999999876421 1112267
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCcc
Q 002051 715 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 794 (975)
Q Consensus 715 ~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~ 794 (975)
.++|||||||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+..
T Consensus 97 ~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 97 DRLFFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp SEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred CEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeec
Confidence 7899999999999999999874 56999999999999999999999999999999999999999999999999998643
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCC
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 874 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~ 874 (975)
... .......+||+.|+|||++.+..|+.++|||||||++|+|++|.+||.+.
T Consensus 175 ~~~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~ 227 (353)
T 3txo_A 175 ICN---------------------------GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE 227 (353)
T ss_dssp CC------------------------------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccC---------------------------CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCC
Confidence 211 11234568999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh--hhHHHHHcCCCccCCCcchhhccCCCCCCCCCc
Q 002051 875 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH--EGANEIKKHPFFKGVNWALVRCMNPPELDAPLF 952 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~--~~~~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~ 952 (975)
+..+++..+......+|. .++..+.+||++||++||.+||++. ..+++|++||||++++|..+.....+....|.+
T Consensus 228 ~~~~~~~~i~~~~~~~p~--~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~w~~l~~~~~~~p~~p~~ 305 (353)
T 3txo_A 228 NEDDLFEAILNDEVVYPT--WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQIEPPFRPRI 305 (353)
T ss_dssp SHHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCC
T ss_pred CHHHHHHHHHcCCCCCCC--CCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCCCHHHHhcCcCCCCccCCC
Confidence 999999999998877765 4789999999999999999999941 234899999999999999874433222234655
Q ss_pred ccC
Q 002051 953 ATD 955 (975)
Q Consensus 953 ~~~ 955 (975)
.+.
T Consensus 306 ~~~ 308 (353)
T 3txo_A 306 KSR 308 (353)
T ss_dssp CST
T ss_pred CCc
Confidence 443
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-43 Score=396.73 Aligned_cols=257 Identities=40% Similarity=0.761 Sum_probs=217.9
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVC 718 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~ 718 (975)
+..++|++++.||+|+||+||+|+++.+|+.||||++++... ........++|
T Consensus 2 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 81 (337)
T 1o6l_A 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLC 81 (337)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEE
T ss_pred CChHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEE
Confidence 456799999999999999999999999999999999976421 11122677899
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
+|||||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 82 lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~- 158 (337)
T 1o6l_A 82 FVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD- 158 (337)
T ss_dssp EEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT-
T ss_pred EEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccC-
Confidence 999999999999999874 56999999999999999999999999999999999999999999999999998643211
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~ 878 (975)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+...
T Consensus 159 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~ 212 (337)
T 1o6l_A 159 --------------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER 212 (337)
T ss_dssp --------------------------TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred --------------------------CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHH
Confidence 112345689999999999999999999999999999999999999999999989
Q ss_pred HHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhc--cCCCCCCCCCcccC
Q 002051 879 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC--MNPPELDAPLFATD 955 (975)
Q Consensus 879 ~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~--~~~~~~~~p~~~~~ 955 (975)
.+..+......+|. .++.++.+||.+||+.||.+||++. ..+++|++||||++++|..+.. ..+|. .|...++
T Consensus 213 ~~~~i~~~~~~~p~--~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~~~~~~~~~~~~pp~--~p~~~~~ 288 (337)
T 1o6l_A 213 LFELILMEEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPF--KPQVTSE 288 (337)
T ss_dssp HHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSC--CCCCSST
T ss_pred HHHHHHcCCCCCCC--CCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCC--CCCCCCc
Confidence 99999888777664 4789999999999999999999321 1299999999999999987743 34443 3544433
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-44 Score=392.30 Aligned_cols=239 Identities=22% Similarity=0.307 Sum_probs=188.2
Q ss_pred ccccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCC
Q 002051 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKT 715 (975)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~ 715 (975)
..|.|+.++|++.++||+|+||+||+|++.. .||||+++.... +. ....+
T Consensus 29 ~~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g-~~~~~ 104 (307)
T 3omv_A 29 YYWEIEASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG-YMTKD 104 (307)
T ss_dssp CCCBCCTTSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEE-EECSS
T ss_pred cCcEEcHHHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEE-EEECC
Confidence 3567889999999999999999999998643 599999864310 11 11456
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
.+|||||||+||+|.++|... ...+++..+..|+.||+.||+|||+++||||||||+|||++.++.+||+|||+|+...
T Consensus 105 ~~~iVmEy~~gGsL~~~l~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 183 (307)
T 3omv_A 105 NLAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp SCEEEEECCSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC--
T ss_pred eEEEEEEcCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecc
Confidence 789999999999999999764 3569999999999999999999999999999999999999999999999999997543
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC---CCCCChhHHHHHHHHHHHHHhCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPFR 872 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~---~~~~~k~DIWSLG~il~ell~G~~Pf~ 872 (975)
... ........+||+.|||||++.+ ..|+.++|||||||+||||++|+.||.
T Consensus 184 ~~~-------------------------~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~ 238 (307)
T 3omv_A 184 RWS-------------------------GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYS 238 (307)
T ss_dssp -----------------------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred cCC-------------------------cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCC
Confidence 110 0112345689999999999964 358899999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCCCCCC----CCCCcHHHHHHHHHhcccCccccCCChhhHH--HHHcCCC
Q 002051 873 GKTRQKTFANILHKDLKFPS----STPTSLHAKQLMYRLLHRDPKSRLGSHEGAN--EIKKHPF 930 (975)
Q Consensus 873 ~~~~~~~~~~i~~~~~~~p~----~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~--elL~Hp~ 930 (975)
+.+....+..++......|. ...++..+.+||.+||+.||++|||+.++++ ++|+|++
T Consensus 239 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 239 HINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp TCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred CCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 87776666666655443332 2457899999999999999999999433222 2355654
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-43 Score=401.95 Aligned_cols=262 Identities=37% Similarity=0.689 Sum_probs=217.4
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc----------------------------cccccCCe
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML----------------------------NRNKTKTH 716 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~----------------------------~~~~~~~~ 716 (975)
.+..++|++++.||+|+||.||+|+++.+++.||||++++.... ....+..+
T Consensus 48 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~ 127 (396)
T 4dc2_A 48 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR 127 (396)
T ss_dssp -CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCE
Confidence 35678999999999999999999999999999999999765311 11126778
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
+|||||||+||+|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++....
T Consensus 128 ~~lV~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 128 LFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEEEcCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 99999999999999999874 5699999999999999999999999999999999999999999999999999864221
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCC--
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK-- 874 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~-- 874 (975)
. .......+||+.|+|||++.+..|+.++|||||||++|+|++|++||...
T Consensus 206 ~---------------------------~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~ 258 (396)
T 4dc2_A 206 P---------------------------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGS 258 (396)
T ss_dssp T---------------------------TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC
T ss_pred C---------------------------CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccc
Confidence 0 11234578999999999999999999999999999999999999999642
Q ss_pred -------CHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh--hhHHHHHcCCCccCCCcchhhccCCC
Q 002051 875 -------TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH--EGANEIKKHPFFKGVNWALVRCMNPP 945 (975)
Q Consensus 875 -------~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~--~~~~elL~Hp~f~~~~~~~~~~~~~~ 945 (975)
........+......+|. .++.++++||++||++||.+||++. ..++||++||||++++|..+.....+
T Consensus 259 ~~~~~~~~~~~~~~~i~~~~~~~p~--~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~w~~l~~~~~~ 336 (396)
T 4dc2_A 259 SDNPDQNTEDYLFQVILEKQIRIPR--SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVV 336 (396)
T ss_dssp ------CCHHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCCHHHHHTTCSC
T ss_pred ccccchhhHHHHHHHHhccccCCCC--cCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCCCHHHHHcCCCC
Confidence 234456677777766665 4789999999999999999999964 34789999999999999988543322
Q ss_pred CCCCCCcccCcc
Q 002051 946 ELDAPLFATDTE 957 (975)
Q Consensus 946 ~~~~p~~~~~~~ 957 (975)
....|....+.+
T Consensus 337 pp~~p~~~~~~d 348 (396)
T 4dc2_A 337 PPFKPNISGEFG 348 (396)
T ss_dssp CSCCCCCCSSTT
T ss_pred CCCcCCCCCccc
Confidence 224566655443
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-43 Score=400.45 Aligned_cols=258 Identities=38% Similarity=0.678 Sum_probs=221.5
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc----------------------------cccccCCe
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML----------------------------NRNKTKTH 716 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~----------------------------~~~~~~~~ 716 (975)
.+..++|++++.||+|+||.||+|+++.+++.||||++.+..+. ....+..+
T Consensus 34 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~ 113 (373)
T 2r5t_A 34 HAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADK 113 (373)
T ss_dssp TCCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSE
T ss_pred CCChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCE
Confidence 45678999999999999999999999999999999998764321 11125678
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
+|||||||+||+|.+++.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++....
T Consensus 114 ~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 114 LYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 99999999999999999874 5699999999999999999999999999999999999999999999999999864221
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 876 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~ 876 (975)
. .......+||+.|+|||++.+..|+.++|||||||++|+|++|..||.+.+.
T Consensus 192 ~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~ 244 (373)
T 2r5t_A 192 H---------------------------NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT 244 (373)
T ss_dssp C---------------------------CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH
T ss_pred C---------------------------CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH
Confidence 0 1123457899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhc--cCCCCCCCCCccc
Q 002051 877 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRC--MNPPELDAPLFAT 954 (975)
Q Consensus 877 ~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~--~~~~~~~~p~~~~ 954 (975)
.+++.++......++. .++..+++||.+||+.||.+||++.+.+.+|++||||++++|..+.. ..+| ..|....
T Consensus 245 ~~~~~~i~~~~~~~~~--~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~~w~~l~~~~~~pp--~~p~~~~ 320 (373)
T 2r5t_A 245 AEMYDNILNKPLQLKP--NITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKITPP--FNPNVSG 320 (373)
T ss_dssp HHHHHHHHHSCCCCCS--SSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTCCHHHHHTTCSCCS--CCCSCCC
T ss_pred HHHHHHHHhcccCCCC--CCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCCCHHHHHhCCCCCC--CCCCCCC
Confidence 9999999988766654 47899999999999999999999877789999999999999998744 3444 3455543
Q ss_pred C
Q 002051 955 D 955 (975)
Q Consensus 955 ~ 955 (975)
+
T Consensus 321 ~ 321 (373)
T 2r5t_A 321 P 321 (373)
T ss_dssp -
T ss_pred c
Confidence 3
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=391.13 Aligned_cols=237 Identities=21% Similarity=0.333 Sum_probs=195.5
Q ss_pred ccccCCCcccccccccCCceEEEEEEEe-----CCCeEEEEEEeccch------------------------hccccccC
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGV------------------------MLNRNKTK 714 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~-----~t~~~vAiK~l~~~~------------------------~~~~~~~~ 714 (975)
..|..++|.+.++||+|+||+||+|++. .+++.||||+++... ++....+.
T Consensus 8 ~~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~ 87 (299)
T 4asz_A 8 QHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEG 87 (299)
T ss_dssp CBCCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred cccCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeC
Confidence 3567788999999999999999999875 368899999987531 12222367
Q ss_pred CeEEEEEeccCCCCHHHHHhhCC-----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcE
Q 002051 715 THVCLITDYCPGGELFLLLDRQP-----------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHV 783 (975)
Q Consensus 715 ~~~~lV~Ey~~ggsL~~~l~~~~-----------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~v 783 (975)
+.+|||||||+||+|.++|.... ...+++..+..|+.||+.||.|||+++||||||||+|||++.++.+
T Consensus 88 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~ 167 (299)
T 4asz_A 88 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLV 167 (299)
T ss_dssp SSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCE
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcE
Confidence 78999999999999999997632 3469999999999999999999999999999999999999999999
Q ss_pred EEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHH
Q 002051 784 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE 863 (975)
Q Consensus 784 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~e 863 (975)
||+|||+|+...... ........+||+.|||||++.+..|+.++|||||||++||
T Consensus 168 Ki~DFGla~~~~~~~-------------------------~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~E 222 (299)
T 4asz_A 168 KIGDFGMSRDVYSTD-------------------------YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWE 222 (299)
T ss_dssp EECCCSCHHHHTGGG-------------------------CEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred EECCcccceecCCCC-------------------------ceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHH
Confidence 999999996543110 0112234579999999999999999999999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCcc
Q 002051 864 MLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932 (975)
Q Consensus 864 ll~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~ 932 (975)
|++ |+.||.+.+..+++..+..+.. ++.+..++.++.+||.+||+.||++||| +++| |+|++
T Consensus 223 llt~G~~Pf~~~~~~~~~~~i~~~~~-~~~p~~~~~~~~~li~~cl~~dP~~RPs----~~~i--~~~L~ 285 (299)
T 4asz_A 223 IFTYGKQPWYQLSNNEVIECITQGRV-LQRPRTCPQEVYELMLGCWQREPHMRKN----IKGI--HTLLQ 285 (299)
T ss_dssp HHTTTCCTTTTSCHHHHHHHHHHTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHH--HHHHH
T ss_pred HHcCCCCCCCCCCHHHHHHHHHcCCC-CCCCccchHHHHHHHHHHcCCChhHCcC----HHHH--HHHHH
Confidence 998 9999999999998888887653 3344568999999999999999999999 7887 34554
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-43 Score=396.13 Aligned_cols=257 Identities=35% Similarity=0.683 Sum_probs=218.8
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc----------------------------cccccCCe
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML----------------------------NRNKTKTH 716 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~----------------------------~~~~~~~~ 716 (975)
.+..++|++++.||+|+||.||+|+++.+++.||||++++.... ....+..+
T Consensus 16 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~ 95 (353)
T 2i0e_A 16 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 95 (353)
T ss_dssp ---CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSE
T ss_pred CCchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCE
Confidence 45678999999999999999999999999999999998764211 11125678
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
+|||||||+||+|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++....
T Consensus 96 ~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 96 LYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 99999999999999999874 4699999999999999999999999999999999999999999999999999864321
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 876 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~ 876 (975)
. .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.
T Consensus 174 ~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~ 226 (353)
T 2i0e_A 174 D---------------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE 226 (353)
T ss_dssp T---------------------------TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred C---------------------------CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH
Confidence 1 1123456899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhc--cCCCCCCCCCcc
Q 002051 877 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC--MNPPELDAPLFA 953 (975)
Q Consensus 877 ~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~--~~~~~~~~p~~~ 953 (975)
..++..+......+|. .++.++.+||++||..||.+||++. ..+++|++||||++++|..+.. ..+| ..|...
T Consensus 227 ~~~~~~i~~~~~~~p~--~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~~w~~l~~~~~~~p--~~p~~~ 302 (353)
T 2i0e_A 227 DELFQSIMEHNVAYPK--SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPP--YKPKAC 302 (353)
T ss_dssp HHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTCCHHHHHTTCSCCS--CCCCCC
T ss_pred HHHHHHHHhCCCCCCC--CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCCCHHHHHhCCCCCC--cCCCCC
Confidence 9999999998877764 5789999999999999999999753 3589999999999999998844 4444 345544
Q ss_pred c
Q 002051 954 T 954 (975)
Q Consensus 954 ~ 954 (975)
.
T Consensus 303 ~ 303 (353)
T 2i0e_A 303 G 303 (353)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-43 Score=391.19 Aligned_cols=234 Identities=20% Similarity=0.286 Sum_probs=189.5
Q ss_pred cccCCCcccccccccCCceEEEEEEEe-----CCCeEEEEEEeccch------------------------hccccccCC
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGV------------------------MLNRNKTKT 715 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~-----~t~~~vAiK~l~~~~------------------------~~~~~~~~~ 715 (975)
.+..++|.+.++||+|+||+||+|++. .+++.||||+++... ++....+..
T Consensus 37 ~i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~ 116 (329)
T 4aoj_A 37 HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR 116 (329)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred ccCHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence 466678999999999999999999875 368999999987532 112223677
Q ss_pred eEEEEEeccCCCCHHHHHhhCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc
Q 002051 716 HVCLITDYCPGGELFLLLDRQP-------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 782 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~-------------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~ 782 (975)
.+|||||||++|+|.+++.+.. ...+++..+..|+.||+.||.|||+++||||||||+|||++.++.
T Consensus 117 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~ 196 (329)
T 4aoj_A 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLV 196 (329)
T ss_dssp SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTE
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCc
Confidence 8999999999999999997642 246899999999999999999999999999999999999999999
Q ss_pred EEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHH
Q 002051 783 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 862 (975)
Q Consensus 783 vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ 862 (975)
+||+|||+|+...... ........+||+.|||||++.+..|+.++|||||||+||
T Consensus 197 ~Ki~DFGla~~~~~~~-------------------------~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~ 251 (329)
T 4aoj_A 197 VKIGDFGMSRDIYSTD-------------------------YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLW 251 (329)
T ss_dssp EEECCCC-----------------------------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred EEEcccccceeccCCC-------------------------cceecCcccccccccChhhhcCCCCCccccccchHHHHH
Confidence 9999999997643211 011223467999999999999999999999999999999
Q ss_pred HHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 863 EMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 863 ell~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
||++ |+.||.+.+..+.+..+..+. .++.+..+++++.+||.+||+.||++||| ++||+.+
T Consensus 252 Ellt~G~~Pf~~~~~~~~~~~i~~g~-~~~~p~~~~~~~~~li~~cl~~dP~~RPs----~~ei~~~ 313 (329)
T 4aoj_A 252 EIFTYGKQPWYQLSNTEAIDCITQGR-ELERPRACPPEVYAIMRGCWQREPQQRHS----IKDVHAR 313 (329)
T ss_dssp HHHTTSCCTTCSSCHHHHHHHHHHTC-CCCCCTTCCHHHHHHHHHHCCSSTTTSCC----HHHHHHH
T ss_pred HHHcCCCCCCCCCCHHHHHHHHHcCC-CCCCcccccHHHHHHHHHHcCcChhHCcC----HHHHHHH
Confidence 9998 999999999988888887754 34444568999999999999999999999 7777653
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-43 Score=396.60 Aligned_cols=256 Identities=35% Similarity=0.685 Sum_probs=212.9
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh----------------------------ccccccCCe
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM----------------------------LNRNKTKTH 716 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~----------------------------~~~~~~~~~ 716 (975)
.+..++|++++.||+|+||.||+|+++.+|+.||||++++... .....+..+
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 4567899999999999999999999999999999999976421 111226778
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
+|+|||||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++....
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 170 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENML 170 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence 99999999999999999874 5699999999999999999999999999999999999999999999999999864321
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 876 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~ 876 (975)
. .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.
T Consensus 171 ~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~ 223 (345)
T 1xjd_A 171 G---------------------------DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE 223 (345)
T ss_dssp T---------------------------TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred C---------------------------CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH
Confidence 1 1123457899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHH-HHHcCCCccCCCcchhhccCCCCCCCCCcccC
Q 002051 877 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN-EIKKHPFFKGVNWALVRCMNPPELDAPLFATD 955 (975)
Q Consensus 877 ~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~-elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~ 955 (975)
..++..+......+|. .++..+.+||.+||..||.+||+ +. +|++||||++++|..+.....+....|...++
T Consensus 224 ~~~~~~i~~~~~~~p~--~~s~~~~~li~~lL~~dp~~R~~----~~~~i~~hp~f~~~~w~~l~~~~~~~p~~p~~~~~ 297 (345)
T 1xjd_A 224 EELFHSIRMDNPFYPR--WLEKEAKDLLVKLFVREPEKRLG----VRGDIRQHPLFREINWEELERKEIDPPFRPKVKSP 297 (345)
T ss_dssp HHHHHHHHHCCCCCCT--TSCHHHHHHHHHHSCSSGGGSBT----TBSCGGGSGGGTTCCHHHHHTTCSCC---------
T ss_pred HHHHHHHHhCCCCCCc--ccCHHHHHHHHHHhcCCHhHcCC----ChHHHHcCccccCCCHHHHhhCCCCCCcCCCCCCc
Confidence 9999999888766654 47899999999999999999999 65 99999999999999885433322234554443
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-43 Score=407.55 Aligned_cols=263 Identities=35% Similarity=0.643 Sum_probs=222.0
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHV 717 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~ 717 (975)
.+..++|+++++||+|+||+||+|+++.+++.||||++.+... .....+..++
T Consensus 70 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~ 149 (437)
T 4aw2_A 70 RLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNL 149 (437)
T ss_dssp SCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEE
T ss_pred cCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEE
Confidence 4667899999999999999999999999999999999976321 1122367889
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|||||||+||+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+.....
T Consensus 150 ~lV~Ey~~gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~ 228 (437)
T 4aw2_A 150 YLVMDYYVGGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 228 (437)
T ss_dssp EEEECCCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEEEecCCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccC
Confidence 9999999999999999763 356999999999999999999999999999999999999999999999999999654311
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhc-----CCCCCChhHHHHHHHHHHHHHhCCCCCC
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFR 872 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~~~k~DIWSLG~il~ell~G~~Pf~ 872 (975)
. .......+||+.|+|||++. ...|+.++|||||||++|+|++|++||.
T Consensus 229 ~--------------------------~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~ 282 (437)
T 4aw2_A 229 G--------------------------TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFY 282 (437)
T ss_dssp S--------------------------CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred C--------------------------CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCC
Confidence 1 11223468999999999997 5668999999999999999999999999
Q ss_pred CCCHHHHHHHHHhc--CCCCCCC-CCCcHHHHHHHHHhcccCccc--cCCChhhHHHHHcCCCccCCCcchhhccCCCCC
Q 002051 873 GKTRQKTFANILHK--DLKFPSS-TPTSLHAKQLMYRLLHRDPKS--RLGSHEGANEIKKHPFFKGVNWALVRCMNPPEL 947 (975)
Q Consensus 873 ~~~~~~~~~~i~~~--~~~~p~~-~~~s~~~~~li~~~L~~dP~~--R~t~~~~~~elL~Hp~f~~~~~~~~~~~~~~~~ 947 (975)
+.+..+.+.+++.. .+.+|.. ..++.++++||++||..+|++ |++ ++|+++||||++++|..++...+|.+
T Consensus 283 ~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~----~~eil~Hpff~~i~w~~l~~~~~p~~ 358 (437)
T 4aw2_A 283 AESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNG----IEDFKKHPFFSGIDWDNIRNCEAPYI 358 (437)
T ss_dssp CSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTT----THHHHTSGGGTTCCTTTGGGSCCSCC
T ss_pred CCChhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCC----HHHHhCCCccCCCCHHHHhhCCCCCC
Confidence 99999999888763 3455544 458999999999999998888 888 99999999999999999988877755
Q ss_pred CCCCcccCccccc
Q 002051 948 DAPLFATDTEKEY 960 (975)
Q Consensus 948 ~~p~~~~~~~~~~ 960 (975)
|.+..+.+..+
T Consensus 359 --P~~~~~~d~~~ 369 (437)
T 4aw2_A 359 --PEVSSPTDTSN 369 (437)
T ss_dssp --CCCSSTTCCTT
T ss_pred --CcCCCccchhh
Confidence 66555444433
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-43 Score=388.26 Aligned_cols=235 Identities=22% Similarity=0.348 Sum_probs=194.5
Q ss_pred ccccCCCcccccccccCCceEEEEEEEe-----CCCeEEEEEEeccch-------------------------hcccccc
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGV-------------------------MLNRNKT 713 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~-----~t~~~vAiK~l~~~~-------------------------~~~~~~~ 713 (975)
..+...+++++++||+|+||+||+|... .+++.||||+++... ++.....
T Consensus 21 ~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~ 100 (308)
T 4gt4_A 21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK 100 (308)
T ss_dssp CBCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE
Confidence 3466778999999999999999999864 467899999986431 1122225
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec
Q 002051 714 KTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG 779 (975)
Q Consensus 714 ~~~~~lV~Ey~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~ 779 (975)
...+|||||||++|+|.++|.... ...+++..+..|+.||+.||+|||+++||||||||+|||++.
T Consensus 101 ~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~ 180 (308)
T 4gt4_A 101 DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYD 180 (308)
T ss_dssp SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG
T ss_pred CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECC
Confidence 678899999999999999996532 235899999999999999999999999999999999999999
Q ss_pred CCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHH
Q 002051 780 NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGI 859 (975)
Q Consensus 780 ~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~ 859 (975)
++.+||+|||+|+...... ........+||+.|||||++.+..|+.++|||||||
T Consensus 181 ~~~~Ki~DFGlar~~~~~~-------------------------~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGv 235 (308)
T 4gt4_A 181 KLNVKISDLGLFREVYAAD-------------------------YYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGV 235 (308)
T ss_dssp GGCEEECCSCCBCGGGGGG-------------------------CBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred CCCEEECCcccceeccCCC-------------------------ceeEecccccCCcccCHHHHhCCCCCccchhhhHHH
Confidence 9999999999997543111 112234568999999999999999999999999999
Q ss_pred HHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 860 LLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 860 il~ell~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
+||||++ |..||.+.+..+++..+..+. ..|.+..++..+.+||.+||+.||.+||| +.||+++
T Consensus 236 vl~El~t~g~~Pf~~~~~~~~~~~i~~~~-~~~~p~~~~~~~~~li~~C~~~dP~~RPs----~~ei~~~ 300 (308)
T 4gt4_A 236 VLWEVFSYGLQPYCGYSNQDVVEMIRNRQ-VLPCPDDCPAWVYALMIECWNEFPSRRPR----FKDIHSR 300 (308)
T ss_dssp HHHHHHTTTCCTTTTCCHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCCcccchHHHHHHHHHHcCCChhHCcC----HHHHHHH
Confidence 9999998 899999999988888877654 34455668999999999999999999999 6666543
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-43 Score=403.34 Aligned_cols=257 Identities=35% Similarity=0.632 Sum_probs=218.7
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHV 717 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~ 717 (975)
.+..++|++++.||+|+||+||+|+++.+++.||+|++.+... .....+..++
T Consensus 65 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 144 (410)
T 3v8s_A 65 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL 144 (410)
T ss_dssp SCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEE
Confidence 4567899999999999999999999999999999999876321 1222367889
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|||||||+||+|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 145 ~lV~E~~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~ 221 (410)
T 3v8s_A 145 YMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE 221 (410)
T ss_dssp EEEECCCTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEEEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccC
Confidence 999999999999999976 35899999999999999999999999999999999999999999999999999654311
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC----CCChhHHHHHHHHHHHHHhCCCCCCC
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGILLYEMLYGYTPFRG 873 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~----~~~k~DIWSLG~il~ell~G~~Pf~~ 873 (975)
. .......+||+.|+|||++.+.. |+.++|||||||++|+|++|++||.+
T Consensus 222 ~--------------------------~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 275 (410)
T 3v8s_A 222 G--------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 275 (410)
T ss_dssp S--------------------------EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred C--------------------------cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCC
Confidence 1 11233568999999999998765 78899999999999999999999999
Q ss_pred CCHHHHHHHHHhc--CCCCCCCCCCcHHHHHHHHHhcccCccc--cCCChhhHHHHHcCCCccCCCcchh--hccCCCCC
Q 002051 874 KTRQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKS--RLGSHEGANEIKKHPFFKGVNWALV--RCMNPPEL 947 (975)
Q Consensus 874 ~~~~~~~~~i~~~--~~~~p~~~~~s~~~~~li~~~L~~dP~~--R~t~~~~~~elL~Hp~f~~~~~~~~--~~~~~~~~ 947 (975)
.+....+.+++.. .+.+|....++.++++||++||+.+|.+ |++ ++||++||||++++|..+ +...+|.
T Consensus 276 ~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~----~~ei~~Hp~f~~~~w~~~~~~~~~~p~- 350 (410)
T 3v8s_A 276 DSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNG----VEEIKRHLFFKNDQWAWETLRDTVAPV- 350 (410)
T ss_dssp SSHHHHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSC----HHHHHTSGGGCCSSCCSTTGGGSCCSC-
T ss_pred CChhhHHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCC----HHHHhcCccccCCCHHHHhhcccCCCC-
Confidence 9999999988874 3566766678999999999999988988 999 999999999999998644 5555654
Q ss_pred CCCCcccCc
Q 002051 948 DAPLFATDT 956 (975)
Q Consensus 948 ~~p~~~~~~ 956 (975)
.|.+.++.
T Consensus 351 -~p~~~~~~ 358 (410)
T 3v8s_A 351 -VPDLSSDI 358 (410)
T ss_dssp -CCCCSSTT
T ss_pred -CCcCCCcc
Confidence 46655443
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=387.49 Aligned_cols=243 Identities=42% Similarity=0.807 Sum_probs=213.2
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVC 718 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~ 718 (975)
+..++|++++.||+|+||.||+|+++.+|+.||+|++++... .....+..++|
T Consensus 3 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~ 82 (318)
T 1fot_A 3 YSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIF 82 (318)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEE
T ss_pred CChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEE
Confidence 456789999999999999999999999999999999876421 11122677899
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
+|||||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++....
T Consensus 83 lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~-- 158 (318)
T 1fot_A 83 MIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-- 158 (318)
T ss_dssp EEECCCCSCBHHHHHHHT--SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS--
T ss_pred EEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCC--
Confidence 999999999999999875 5699999999999999999999999999999999999999999999999999865321
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~ 878 (975)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+...
T Consensus 159 ----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~ 210 (318)
T 1fot_A 159 ----------------------------VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK 210 (318)
T ss_dssp ----------------------------CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred ----------------------------ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH
Confidence 1234689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChh-hHHHHHcCCCccCCCcchhhcc
Q 002051 879 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVRCM 942 (975)
Q Consensus 879 ~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~-~~~elL~Hp~f~~~~~~~~~~~ 942 (975)
.+..+......+|. .++.++.+||++||..||.+||+... ++++|++||||++++|..+...
T Consensus 211 ~~~~i~~~~~~~p~--~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~~~~~~~~~ 273 (318)
T 1fot_A 211 TYEKILNAELRFPP--FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSR 273 (318)
T ss_dssp HHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCCHHHHHTT
T ss_pred HHHHHHhCCCCCCC--CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCCCHHHHHhC
Confidence 99999988777664 47899999999999999999994321 3999999999999999987443
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=398.79 Aligned_cols=237 Identities=25% Similarity=0.379 Sum_probs=196.4
Q ss_pred cccccCCCcccccccccCCceEEEEEEEeCC-----CeEEEEEEeccchh--------------------------cccc
Q 002051 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVM--------------------------LNRN 711 (975)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t-----~~~vAiK~l~~~~~--------------------------~~~~ 711 (975)
.|+|+.++|+++++||+|+||+||+|.+..+ ++.||||.++.... +...
T Consensus 58 ~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~ 137 (353)
T 4ase_A 58 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC 137 (353)
T ss_dssp HHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred ccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEE
Confidence 3578889999999999999999999998764 36899999865310 1111
Q ss_pred -ccCCeEEEEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 002051 712 -KTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 776 (975)
Q Consensus 712 -~~~~~~~lV~Ey~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NIL 776 (975)
.....+|||||||++|+|.++|.... ...+++..+..|+.||+.||+|||+++||||||||+|||
T Consensus 138 ~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NIL 217 (353)
T 4ase_A 138 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL 217 (353)
T ss_dssp CCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred EecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCcccee
Confidence 13457899999999999999997532 245899999999999999999999999999999999999
Q ss_pred EecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHH
Q 002051 777 LQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWA 856 (975)
Q Consensus 777 l~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWS 856 (975)
++.++.+||+|||+|+....... .......+||+.|||||++.+..|+.++||||
T Consensus 218 l~~~~~vKi~DFGlar~~~~~~~-------------------------~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS 272 (353)
T 4ase_A 218 LSEKNVVKICDFGLARDIYKDPD-------------------------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 272 (353)
T ss_dssp ECGGGCEEECCCGGGSCTTTCTT-------------------------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHH
T ss_pred eCCCCCEEECcchhhhhcccCCC-------------------------ceeeccccccccccCHHHHhcCCCCCcccEee
Confidence 99999999999999976532111 11234567999999999999999999999999
Q ss_pred HHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 857 LGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 857 LG~il~ell~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
|||+||||++ |..||.+.+..+.+..++.....++.+..+++++.+||.+||+.||++||| +.||++|
T Consensus 273 ~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt----~~eil~~ 341 (353)
T 4ase_A 273 FGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT----FSELVEH 341 (353)
T ss_dssp HHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred hHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcC----HHHHHHH
Confidence 9999999997 999999876555555555555555556678999999999999999999999 8888876
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-42 Score=390.83 Aligned_cols=258 Identities=38% Similarity=0.659 Sum_probs=220.2
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc---------------------------cccccCCeE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML---------------------------NRNKTKTHV 717 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~---------------------------~~~~~~~~~ 717 (975)
....++|++++.||+|+||.||+|+++.+|+.||||++.+.... ....+..++
T Consensus 37 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 116 (350)
T 1rdq_E 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNL 116 (350)
T ss_dssp CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred CCCHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence 34567999999999999999999999999999999998654211 112257789
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|||||||+||+|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++....
T Consensus 117 ~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~- 193 (350)
T 1rdq_E 117 YMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG- 193 (350)
T ss_dssp EEEEECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS-
T ss_pred EEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccC-
Confidence 9999999999999999874 4699999999999999999999999999999999999999999999999999865321
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
.....+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..
T Consensus 194 -----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~ 244 (350)
T 1rdq_E 194 -----------------------------RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244 (350)
T ss_dssp -----------------------------CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred -----------------------------CcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH
Confidence 123468999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCC-hhhHHHHHcCCCccCCCcchhhccCCCCCCCCCcccCc
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDT 956 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~-~~~~~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~~ 956 (975)
..+..+..+...+|. .++..+.+||.+||+.||.+||+. ...+++|++||||++++|..+.....+....|.+..+.
T Consensus 245 ~~~~~i~~~~~~~p~--~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~~w~~~~~~~~~~p~~p~~~~~~ 322 (350)
T 1rdq_E 245 QIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 322 (350)
T ss_dssp HHHHHHHHCCCCCCT--TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCSTT
T ss_pred HHHHHHHcCCCCCCC--CCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCCCHHHHhhccCCCCCCCCCCCcc
Confidence 999999988777664 478999999999999999999984 34589999999999999987754332222346554443
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-42 Score=388.14 Aligned_cols=260 Identities=37% Similarity=0.701 Sum_probs=215.0
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc----------------------------cccccCCe
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML----------------------------NRNKTKTH 716 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~----------------------------~~~~~~~~ 716 (975)
.+..++|++++.||+|+||.||+|+++.+++.||||++.+.... ....+..+
T Consensus 5 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~ 84 (345)
T 3a8x_A 5 PLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR 84 (345)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred CCchhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCE
Confidence 45678999999999999999999999999999999999764211 11125678
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
+|+|||||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++....
T Consensus 85 ~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~ 162 (345)
T 3a8x_A 85 LFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 162 (345)
T ss_dssp EEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred EEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence 99999999999999999874 5699999999999999999999999999999999999999999999999999864221
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCC---
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG--- 873 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~--- 873 (975)
. .......+||+.|+|||++.+..++.++|||||||++|+|++|..||..
T Consensus 163 ~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 215 (345)
T 3a8x_A 163 P---------------------------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGS 215 (345)
T ss_dssp T---------------------------TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC
T ss_pred C---------------------------CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCccc
Confidence 1 1123456899999999999999999999999999999999999999975
Q ss_pred ------CCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh--hhHHHHHcCCCccCCCcchhhccCCC
Q 002051 874 ------KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH--EGANEIKKHPFFKGVNWALVRCMNPP 945 (975)
Q Consensus 874 ------~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~--~~~~elL~Hp~f~~~~~~~~~~~~~~ 945 (975)
.........+......+|. .++..+.+||.+||++||.+||++. ..+.++++||||++++|..+.....+
T Consensus 216 ~~~~~~~~~~~~~~~i~~~~~~~p~--~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~~w~~~~~~~~~ 293 (345)
T 3a8x_A 216 SDNPDQNTEDYLFQVILEKQIRIPR--SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVV 293 (345)
T ss_dssp -------CHHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTCCHHHHHTTCSC
T ss_pred ccccccccHHHHHHHHHcCCCCCCC--CCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCCCHHHHHhCCCC
Confidence 3344556667777666654 4789999999999999999999953 34689999999999999887543322
Q ss_pred CCCCCCcccC
Q 002051 946 ELDAPLFATD 955 (975)
Q Consensus 946 ~~~~p~~~~~ 955 (975)
....|.+..+
T Consensus 294 ~p~~p~~~~~ 303 (345)
T 3a8x_A 294 PPFKPNISGE 303 (345)
T ss_dssp CSCCCCCCTT
T ss_pred CCcCCCCCCc
Confidence 2245665543
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=401.06 Aligned_cols=262 Identities=35% Similarity=0.640 Sum_probs=214.9
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCe
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTH 716 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~ 716 (975)
..+..++|++++.||+|+||.||+|+++.+|+.||||++++... .....+..+
T Consensus 56 ~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~ 135 (412)
T 2vd5_A 56 VRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENY 135 (412)
T ss_dssp HSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSE
T ss_pred ccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCE
Confidence 34667899999999999999999999999999999999975321 111236788
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
+|||||||+||+|.+++.+. ...+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||+++....
T Consensus 136 ~~lVmE~~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~ 214 (412)
T 2vd5_A 136 LYLVMEYYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRA 214 (412)
T ss_dssp EEEEECCCCSCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEEcCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccC
Confidence 99999999999999999764 23699999999999999999999999999999999999999999999999999965432
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhc-------CCCCCChhHHHHHHHHHHHHHhCCC
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-------GAGHTSAVDWWALGILLYEMLYGYT 869 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-------~~~~~~k~DIWSLG~il~ell~G~~ 869 (975)
.. .......+||+.|+|||++. ...|+.++|||||||++|+|++|+.
T Consensus 215 ~~--------------------------~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~ 268 (412)
T 2vd5_A 215 DG--------------------------TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQT 268 (412)
T ss_dssp TS--------------------------CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSC
T ss_pred CC--------------------------ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCC
Confidence 11 01123468999999999997 3568999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHhc--CCCCCC-CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhccCCCC
Q 002051 870 PFRGKTRQKTFANILHK--DLKFPS-STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPE 946 (975)
Q Consensus 870 Pf~~~~~~~~~~~i~~~--~~~~p~-~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~~~~~~ 946 (975)
||.+.+..+.+.+++.. ...+|. ...++.++++||++||. +|.+|++ +..++||++||||++++|..++...+|.
T Consensus 269 Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlg-r~~~~ei~~Hpff~~i~w~~l~~~~~p~ 346 (412)
T 2vd5_A 269 PFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLG-RGGAGDFRTHPFFFGLDWDGLRDSVPPF 346 (412)
T ss_dssp TTCCSSHHHHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTT-TTTHHHHHTSGGGTTCCSTTSTTSCCSC
T ss_pred CCCCCCHHHHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCC-CCCHHHHhcCCCcCCCCHHHHhhcCCCC
Confidence 99999999888888763 244443 24689999999999999 9999963 1239999999999999999998776664
Q ss_pred CCCCCcccCc
Q 002051 947 LDAPLFATDT 956 (975)
Q Consensus 947 ~~~p~~~~~~ 956 (975)
+ |.+..+.
T Consensus 347 ~--p~~~~~~ 354 (412)
T 2vd5_A 347 T--PDFEGAT 354 (412)
T ss_dssp C--CC-----
T ss_pred C--CcCCCcc
Confidence 4 6654433
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-41 Score=387.57 Aligned_cols=259 Identities=30% Similarity=0.581 Sum_probs=213.4
Q ss_pred hcccccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccc
Q 002051 660 LDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNK 712 (975)
Q Consensus 660 ~~~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~ 712 (975)
+.....+..++|++++.||+|+||.||+|.+..+++.||||++.+... .....
T Consensus 6 ~~~~~~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~ 85 (384)
T 4fr4_A 6 FDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQ 85 (384)
T ss_dssp --CCCCCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred cCCCCCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 344567788999999999999999999999999999999999875421 12223
Q ss_pred cCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCC
Q 002051 713 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 792 (975)
Q Consensus 713 ~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~ 792 (975)
+..++|+|||||.||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++
T Consensus 86 ~~~~~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~ 163 (384)
T 4fr4_A 86 DEEDMFMVVDLLLGGDLRYHLQQN--VHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAA 163 (384)
T ss_dssp CSSEEEEEECCCTTEEHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred eCCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceee
Confidence 677899999999999999999874 569999999999999999999999999999999999999999999999999996
Q ss_pred ccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC---CCCCChhHHHHHHHHHHHHHhCCC
Q 002051 793 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYT 869 (975)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~---~~~~~k~DIWSLG~il~ell~G~~ 869 (975)
..... ......+||+.|+|||++.+ ..|+.++|||||||++|+|++|..
T Consensus 164 ~~~~~----------------------------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~ 215 (384)
T 4fr4_A 164 MLPRE----------------------------TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215 (384)
T ss_dssp ECCTT----------------------------CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSC
T ss_pred eccCC----------------------------CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCC
Confidence 54311 12345689999999999964 458899999999999999999999
Q ss_pred CCCC---CCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhccCCCC
Q 002051 870 PFRG---KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPE 946 (975)
Q Consensus 870 Pf~~---~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~~~~~~ 946 (975)
||.. ......+..+......+|. .++..+.+||.+||++||.+||++ +++|+.||||++++|..+.......
T Consensus 216 Pf~~~~~~~~~~~~~~~~~~~~~~p~--~~s~~~~~li~~lL~~dP~~R~s~---~~~l~~hp~f~~~~w~~~~~~~~~p 290 (384)
T 4fr4_A 216 PYHIRSSTSSKEIVHTFETTVVTYPS--AWSQEMVSLLKKLLEPNPDQRFSQ---LSDVQNFPYMNDINWDAVFQKRLIP 290 (384)
T ss_dssp SSCCCTTSCHHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHSCSSGGGSCCS---HHHHHTSGGGTTCCHHHHHTTCSCC
T ss_pred CCCCCCCccHHHHHHHHhhcccCCCC--cCCHHHHHHHHHHhcCCHhHhccc---HHHHHcChhhhcCCHHHHHhCCCCC
Confidence 9975 3344555556555555543 478999999999999999999984 8999999999999998875543333
Q ss_pred CCCCCcc
Q 002051 947 LDAPLFA 953 (975)
Q Consensus 947 ~~~p~~~ 953 (975)
...|...
T Consensus 291 ~~~p~~~ 297 (384)
T 4fr4_A 291 GFIPNKG 297 (384)
T ss_dssp CCCCSCC
T ss_pred CCCCCCC
Confidence 3345543
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-41 Score=396.84 Aligned_cols=266 Identities=39% Similarity=0.740 Sum_probs=221.2
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCe
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTH 716 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~ 716 (975)
..+..++|++++.||+|+||.||+|+++.+|+.||||++.+... ........+
T Consensus 143 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~ 222 (446)
T 4ejn_A 143 HRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDR 222 (446)
T ss_dssp -CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTE
T ss_pred cCCChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCE
Confidence 34667899999999999999999999999999999999875421 111125678
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~-~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
+|||||||+||+|.+++... ..+++..++.++.||+.||.|||+ +||+||||||+|||++.++.+||+|||+++...
T Consensus 223 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 300 (446)
T 4ejn_A 223 LCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 300 (446)
T ss_dssp EEEEECCCSSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred EEEEEeeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence 99999999999999999774 569999999999999999999998 999999999999999999999999999986432
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
.. .......+||+.|+|||++.+..|+.++|||||||++|+|++|..||.+.+
T Consensus 301 ~~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 353 (446)
T 4ejn_A 301 KD---------------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 353 (446)
T ss_dssp C--------------------------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CC---------------------------CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC
Confidence 11 112235689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhccCCCCCCCCCccc
Q 002051 876 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPLFAT 954 (975)
Q Consensus 876 ~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~ 954 (975)
....+..+......+|. .+++.+.+||.+||++||.+||+.. ++++|+++||||++++|..+.....+....|...+
T Consensus 354 ~~~~~~~i~~~~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~~~~~~~~~~~~pp~~p~~~~ 431 (446)
T 4ejn_A 354 HEKLFELILMEEIRFPR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTS 431 (446)
T ss_dssp HHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCSCSS
T ss_pred HHHHHHHHHhCCCCCCc--cCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCCCHHHHhhCcCCCCccCCCCC
Confidence 99999999888777664 4789999999999999999999111 12999999999999999987544333334576665
Q ss_pred Cccccc
Q 002051 955 DTEKEY 960 (975)
Q Consensus 955 ~~~~~~ 960 (975)
+.+..+
T Consensus 432 ~~~~~~ 437 (446)
T 4ejn_A 432 ETDTRY 437 (446)
T ss_dssp TTCCTT
T ss_pred ccchhh
Confidence 555443
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-41 Score=415.17 Aligned_cols=257 Identities=35% Similarity=0.683 Sum_probs=219.8
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh----------------------------ccccccCC
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM----------------------------LNRNKTKT 715 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~----------------------------~~~~~~~~ 715 (975)
..+..++|++++.||+|+||.||+|+++.+++.||||++++... .....+..
T Consensus 336 ~~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~ 415 (674)
T 3pfq_A 336 DRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD 415 (674)
T ss_dssp ----CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSS
T ss_pred ccccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCC
Confidence 34667899999999999999999999999999999999876421 11123567
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
++||||||++||+|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+...
T Consensus 416 ~~~lV~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 416 RLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EEEEEEeCcCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 899999999999999999875 569999999999999999999999999999999999999999999999999986432
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
.. .......+||+.|+|||++.+..|+.++|||||||++|+|++|.+||.+.+
T Consensus 494 ~~---------------------------~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~ 546 (674)
T 3pfq_A 494 WD---------------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 546 (674)
T ss_dssp CT---------------------------TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cC---------------------------CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC
Confidence 11 112345789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCC-hhhHHHHHcCCCccCCCcchhhc--cCCCCCCCCCc
Q 002051 876 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWALVRC--MNPPELDAPLF 952 (975)
Q Consensus 876 ~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~-~~~~~elL~Hp~f~~~~~~~~~~--~~~~~~~~p~~ 952 (975)
..+++..|......+|. .++.++.+||++||++||.+||++ .+.+++|++||||++++|..+.. ..+|. .|..
T Consensus 547 ~~~~~~~i~~~~~~~p~--~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~w~~l~~~~~~pp~--~p~~ 622 (674)
T 3pfq_A 547 EDELFQSIMEHNVAYPK--SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPY--KPKA 622 (674)
T ss_dssp HHHHHHHHHSSCCCCCT--TSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCCHHHHTTTCSCCSC--CCBC
T ss_pred HHHHHHHHHhCCCCCCc--cCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCCCHHHHHhCCCCCCC--CCcC
Confidence 99999999998877775 479999999999999999999995 24569999999999999998844 44443 4554
Q ss_pred c
Q 002051 953 A 953 (975)
Q Consensus 953 ~ 953 (975)
.
T Consensus 623 ~ 623 (674)
T 3pfq_A 623 S 623 (674)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-41 Score=376.31 Aligned_cols=263 Identities=41% Similarity=0.740 Sum_probs=213.3
Q ss_pred ccccCCCcccccccccCCceEEEEEEEe---CCCeEEEEEEeccchh----------------------------ccccc
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVM----------------------------LNRNK 712 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~---~t~~~vAiK~l~~~~~----------------------------~~~~~ 712 (975)
..+..++|++++.||+|+||.||+|++. .+++.||+|++++... .....
T Consensus 12 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 91 (327)
T 3a62_A 12 EKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQ 91 (327)
T ss_dssp -CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEE
T ss_pred CCCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEE
Confidence 3466789999999999999999999986 6899999999875421 11122
Q ss_pred cCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCC
Q 002051 713 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 792 (975)
Q Consensus 713 ~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~ 792 (975)
...++|+|||||+|++|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus 92 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 92 TGGKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp CSSCEEEEEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred cCCEEEEEEeCCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 567899999999999999999874 568999999999999999999999999999999999999999999999999985
Q ss_pred ccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCC
Q 002051 793 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 872 (975)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~ 872 (975)
..... .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus 170 ~~~~~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 222 (327)
T 3a62_A 170 ESIHD---------------------------GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFT 222 (327)
T ss_dssp ------------------------------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred ccccC---------------------------CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCC
Confidence 43211 012234679999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhccCCCCCCCCC
Q 002051 873 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPL 951 (975)
Q Consensus 873 ~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 951 (975)
+.+....+..+......+|. .++..+.+||.+||..||.+||++. ..+.++++||||++++|..+.....+....|.
T Consensus 223 ~~~~~~~~~~i~~~~~~~p~--~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~~~~~~~~~~~~~p~~p~ 300 (327)
T 3a62_A 223 GENRKKTIDKILKCKLNLPP--YLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPL 300 (327)
T ss_dssp CSSHHHHHHHHHHTCCCCCT--TSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSCCHHHHHTTCSCCSCCCC
T ss_pred CCCHHHHHHHHHhCCCCCCC--CCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCCCHHHHhhccCCCCCCCC
Confidence 99999999999887766654 4789999999999999999999533 24999999999999999877543333334566
Q ss_pred cccCcc
Q 002051 952 FATDTE 957 (975)
Q Consensus 952 ~~~~~~ 957 (975)
..+..+
T Consensus 301 ~~~~~~ 306 (327)
T 3a62_A 301 LQSEED 306 (327)
T ss_dssp ------
T ss_pred cCChhh
Confidence 554433
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-41 Score=397.87 Aligned_cols=254 Identities=31% Similarity=0.603 Sum_probs=215.1
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc---------------------------cccccCCeE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML---------------------------NRNKTKTHV 717 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~---------------------------~~~~~~~~~ 717 (975)
.+..++|.+++.||+|+||.||+|+++.+|+.||||++.+.... .......++
T Consensus 181 ~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l 260 (543)
T 3c4z_A 181 PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDL 260 (543)
T ss_dssp CCCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred cCChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEE
Confidence 45678999999999999999999999999999999999754321 112267789
Q ss_pred EEEEeccCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 718 CLITDYCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~--~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
|+|||||+||+|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++...
T Consensus 261 ~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp EEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 99999999999999997643 3469999999999999999999999999999999999999999999999999996543
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCC-
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK- 874 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~- 874 (975)
.. .......+||+.|+|||++.+..|+.++|||||||++|+|++|.+||.+.
T Consensus 341 ~~---------------------------~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~ 393 (543)
T 3c4z_A 341 AG---------------------------QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG 393 (543)
T ss_dssp TT---------------------------CCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTT
T ss_pred CC---------------------------CcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCc
Confidence 11 01123468999999999999999999999999999999999999999875
Q ss_pred ---CHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChh-hHHHHHcCCCccCCCcchhhc--cCCCCC
Q 002051 875 ---TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVRC--MNPPEL 947 (975)
Q Consensus 875 ---~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~-~~~elL~Hp~f~~~~~~~~~~--~~~~~~ 947 (975)
....+...+......+| ..++..+.+||++||++||.+||++.+ .+++|+.||||++++|..+.. ..+|.+
T Consensus 394 ~~~~~~~~~~~i~~~~~~~p--~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i~w~~l~~~~~~pp~~ 470 (543)
T 3c4z_A 394 EKVENKELKQRVLEQAVTYP--DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFV 470 (543)
T ss_dssp CCCCHHHHHHHHHHCCCCCC--TTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTCCHHHHHTTCSCCSCC
T ss_pred cchhHHHHHHHHhhcccCCC--cccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCCCHHHHHcCCCCCCCC
Confidence 34667777777766665 357899999999999999999998653 579999999999999998864 344443
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-41 Score=374.55 Aligned_cols=236 Identities=29% Similarity=0.489 Sum_probs=206.6
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVC 718 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~ 718 (975)
....++|++++.||+|+||.||+|.+..+|+.||||++.+... .........+|
T Consensus 11 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 90 (328)
T 3fe3_A 11 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLY 90 (328)
T ss_dssp CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CCccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEE
Confidence 3456799999999999999999999999999999999865421 11222678899
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
+|||||+||+|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 91 lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~- 167 (328)
T 3fe3_A 91 LIMEYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG- 167 (328)
T ss_dssp EEECCCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS-
T ss_pred EEEECCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCC-
Confidence 999999999999999774 56999999999999999999999999999999999999999999999999998654311
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCC-ChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT-SAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~-~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
......+||+.|+|||++.+..+. .++|||||||++|+|++|+.||.+.+..
T Consensus 168 ---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~ 220 (328)
T 3fe3_A 168 ---------------------------GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 220 (328)
T ss_dssp ---------------------------CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ---------------------------CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH
Confidence 122356899999999999988875 7899999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCc
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~ 936 (975)
.....+..+.+.+|. .++.++.+||++||..||.+||| ++|+++||||+....
T Consensus 221 ~~~~~i~~~~~~~p~--~~s~~~~~li~~~L~~dP~~R~t----~~eil~h~~~~~~~~ 273 (328)
T 3fe3_A 221 ELRERVLRGKYRIPF--YMSTDCENLLKRFLVLNPIKRGT----LEQIMKDRWINAGHE 273 (328)
T ss_dssp HHHHHHHHCCCCCCT--TSCHHHHHHHHHHCCSSTTTSCC----HHHHTTCTTTTTTCT
T ss_pred HHHHHHHhCCCCCCC--CCCHHHHHHHHHHCCCChhHCcC----HHHHhcCHhhcCCCc
Confidence 999999988777665 47899999999999999999999 999999999986543
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-41 Score=379.07 Aligned_cols=238 Identities=30% Similarity=0.484 Sum_probs=208.6
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc------------------------------cccccCCeE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML------------------------------NRNKTKTHV 717 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~------------------------------~~~~~~~~~ 717 (975)
.++|++++.||+|+||.||+|.++.+|+.||+|++.+.... ....+..++
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 45799999999999999999999999999999998754211 112266789
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC----cEEEeeccCCCc
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG----HVSLTDFDLSCL 793 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g----~vkL~DFG~a~~ 793 (975)
|+|||||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++..
T Consensus 91 ~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~ 168 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC--SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence 9999999999999999764 5699999999999999999999999999999999999998776 799999999965
Q ss_pred cCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCC
Q 002051 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 873 (975)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~ 873 (975)
.... ......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+
T Consensus 169 ~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~ 220 (361)
T 2yab_A 169 IEDG----------------------------VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220 (361)
T ss_dssp CCTT----------------------------CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred cCCC----------------------------CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 4311 112346799999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchh
Q 002051 874 KTRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 939 (975)
Q Consensus 874 ~~~~~~~~~i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~ 939 (975)
.+..+.+..+....+.++.. ..++..+++||.+||.+||.+||| +.|+|+||||++++|...
T Consensus 221 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t----~~e~l~hp~~~~~~~~~~ 284 (361)
T 2yab_A 221 DTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLT----IQEALRHPWITPVDTQQA 284 (361)
T ss_dssp SSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC----HHHHHTSTTTSCSSHHHH
T ss_pred CCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcC----HHHHhcCcCcCCCchhhh
Confidence 99999999998887766533 467899999999999999999999 999999999999998654
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-41 Score=397.45 Aligned_cols=254 Identities=34% Similarity=0.600 Sum_probs=213.2
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc---------------------------cccccCCe
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML---------------------------NRNKTKTH 716 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~---------------------------~~~~~~~~ 716 (975)
..+..++|++++.||+|+||.||+|+++.+|+.||||++.+..+. ....+..+
T Consensus 179 ~~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~ 258 (576)
T 2acx_A 179 QPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDA 258 (576)
T ss_dssp SCCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cCccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCE
Confidence 346678999999999999999999999999999999998654211 11226788
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
+|||||||+||+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++....
T Consensus 259 l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 259 LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp EEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 99999999999999999876555699999999999999999999999999999999999999999999999999965431
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC-
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT- 875 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~- 875 (975)
. ......+||+.|+|||++.+..|+.++|||||||++|+|++|.+||.+..
T Consensus 339 ~----------------------------~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~ 390 (576)
T 2acx_A 339 G----------------------------QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKK 390 (576)
T ss_dssp T----------------------------CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSS
T ss_pred C----------------------------ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCccccc
Confidence 1 11224589999999999999999999999999999999999999998753
Q ss_pred ---HHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhc--cCCCCC
Q 002051 876 ---RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC--MNPPEL 947 (975)
Q Consensus 876 ---~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~--~~~~~~ 947 (975)
...+...+......++ ..++.++++||++||++||.+||++. ..++||++||||++++|..+.. ..+|..
T Consensus 391 ~~~~~~i~~~i~~~~~~~p--~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i~w~~l~~~~~~pp~~ 466 (576)
T 2acx_A 391 KIKREEVERLVKEVPEEYS--ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFK 466 (576)
T ss_dssp CCCHHHHHHHHHHCCCCCC--TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTCCHHHHHTTCSCCSCC
T ss_pred chhHHHHHHHhhcccccCC--ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccCCHHHHhcCCCCCCCC
Confidence 3455556665555554 45799999999999999999999533 1499999999999999998854 344444
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-40 Score=361.72 Aligned_cols=233 Identities=26% Similarity=0.441 Sum_probs=200.7
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEEec
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITDY 723 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~Ey 723 (975)
.++|++++.||+|+||+||+|.+..+++.||||++.... +........++|+||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 568999999999999999999999999999999986432 11222367789999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
|+||+|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 99 ~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----- 170 (297)
T 3fxz_A 99 LAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ----- 170 (297)
T ss_dssp CTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT-----
T ss_pred CCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc-----
Confidence 999999999987 358999999999999999999999999999999999999999999999999986543211
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i 883 (975)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+
T Consensus 171 ----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~ 228 (297)
T 3fxz_A 171 ----------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 228 (297)
T ss_dssp ----------------------CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred ----------------------cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 1223467999999999999999999999999999999999999999998887777666
Q ss_pred HhcC-CCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 884 LHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 884 ~~~~-~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
.... ..+.....++..+.+||.+||+.||.+||| +.|+|+||||+..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~ell~h~~~~~~ 276 (297)
T 3fxz_A 229 ATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGS----AKELLQHQFLKIA 276 (297)
T ss_dssp HHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCC----HHHHTTCGGGGGC
T ss_pred HhCCCCCCCCccccCHHHHHHHHHHccCChhHCcC----HHHHhhChhhccc
Confidence 5543 334444568899999999999999999999 9999999999854
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=368.33 Aligned_cols=264 Identities=41% Similarity=0.721 Sum_probs=210.7
Q ss_pred cccCCCcccccccccCCceEEEEEEEe---CCCeEEEEEEeccchh-----------------------------ccccc
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVM-----------------------------LNRNK 712 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~---~t~~~vAiK~l~~~~~-----------------------------~~~~~ 712 (975)
.+..++|++++.||+|+||.||+|++. .+++.||||++++... .....
T Consensus 50 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 129 (355)
T 1vzo_A 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ 129 (355)
T ss_dssp CCCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEE
T ss_pred cccccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEe
Confidence 345678999999999999999999995 5899999999865321 01112
Q ss_pred cCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCC
Q 002051 713 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 792 (975)
Q Consensus 713 ~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~ 792 (975)
....+|||||||++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus 130 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 130 TETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp ETTEEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred eCceEEEEeecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 567889999999999999999874 469999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC--CCCCChhHHHHHHHHHHHHHhCCCC
Q 002051 793 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTP 870 (975)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~~~k~DIWSLG~il~ell~G~~P 870 (975)
..... ........+||+.|+|||++.+ ..++.++|||||||++|+|++|..|
T Consensus 208 ~~~~~--------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~p 261 (355)
T 1vzo_A 208 EFVAD--------------------------ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261 (355)
T ss_dssp ECCGG--------------------------GGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCT
T ss_pred ecccC--------------------------CCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 54211 0112234679999999999986 3478899999999999999999999
Q ss_pred CCCC----CHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhccCCC
Q 002051 871 FRGK----TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPP 945 (975)
Q Consensus 871 f~~~----~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~~~~~ 945 (975)
|... ....+...+......++ ..++..+.+||.+||..||.+||++. .+++++++||||+.++|..+.....|
T Consensus 262 f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~~~~~l~~~~~~ 339 (355)
T 1vzo_A 262 FTVDGEKNSQAEISRRILKSEPPYP--QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVP 339 (355)
T ss_dssp TSCTTSCCCHHHHHHHHHHCCCCCC--TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCHHHHHTTCSC
T ss_pred CccCCccchHHHHHHHHhccCCCCC--cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcCChhHhhhccCC
Confidence 9753 33445555555544443 45788999999999999999999221 12999999999999999988776666
Q ss_pred CCCCCCcccCccc
Q 002051 946 ELDAPLFATDTEK 958 (975)
Q Consensus 946 ~~~~p~~~~~~~~ 958 (975)
....|.++...+.
T Consensus 340 ~p~~p~~~~~~d~ 352 (355)
T 1vzo_A 340 APFKPVIRDELDV 352 (355)
T ss_dssp CSCCCCCCC-CCC
T ss_pred CCCCCcccccccc
Confidence 6667887765544
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-39 Score=361.89 Aligned_cols=237 Identities=30% Similarity=0.489 Sum_probs=205.8
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh------------------------------ccccccCCeEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM------------------------------LNRNKTKTHVC 718 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~------------------------------~~~~~~~~~~~ 718 (975)
++|.+.+.||+|+||.||+|.++.+|+.||+|++.+... ........++|
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 469999999999999999999999999999999865321 11122667899
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC----cEEEeeccCCCcc
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG----HVSLTDFDLSCLT 794 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g----~vkL~DFG~a~~~ 794 (975)
+|||||+|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++...
T Consensus 91 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~ 168 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168 (326)
T ss_dssp EEEECCCSCBHHHHHTTS--SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEEEcCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeEC
Confidence 999999999999999764 5699999999999999999999999999999999999999877 7999999999654
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCC
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 874 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~ 874 (975)
... ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus 169 ~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 220 (326)
T 2y0a_A 169 DFG----------------------------NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220 (326)
T ss_dssp CTT----------------------------SCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred CCC----------------------------CccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCC
Confidence 311 1123457999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchh
Q 002051 875 TRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 939 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~ 939 (975)
+..+.+..+......++.. ..++..+.+||.+||..||.+||| +.++|+||||+..++...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e~l~hp~~~~~~~~~~ 283 (326)
T 2y0a_A 221 TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMT----IQDSLQHPWIKPKDTQQA 283 (326)
T ss_dssp SHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCC----HHHHHHSTTTSCCSHHHH
T ss_pred CHHHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCC----HHHHhcCCCccCCcchhh
Confidence 9888888888776655432 457889999999999999999999 999999999999988644
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-39 Score=376.01 Aligned_cols=233 Identities=29% Similarity=0.485 Sum_probs=202.3
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~lV~ 721 (975)
.++|++++.||+|+||.||+|.++.+|+.||+|++.+... .....+..++|+||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 3579999999999999999999999999999999865421 12223678899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe---cCCcEEEeeccCCCccCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ---GNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~---~~g~vkL~DFG~a~~~~~~~ 798 (975)
|||.||+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.......
T Consensus 90 E~~~gg~L~~~i~~~--~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~ 167 (444)
T 3soa_A 90 DLVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 167 (444)
T ss_dssp CCCBCCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC
T ss_pred EeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC
Confidence 999999999999875 5699999999999999999999999999999999999998 45789999999996543211
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~ 878 (975)
......+||+.|+|||++.+..|+.++|||||||++|+|++|.+||.+.+...
T Consensus 168 ---------------------------~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~ 220 (444)
T 3soa_A 168 ---------------------------QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR 220 (444)
T ss_dssp ---------------------------CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred ---------------------------ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH
Confidence 11234679999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 879 TFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 879 ~~~~i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
.+..+..+.+.++.. ..+++.+.+||.+||++||.+||| +.|+|+||||+.
T Consensus 221 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt----a~e~L~hp~~~~ 273 (444)
T 3soa_A 221 LYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRIT----AAEALKHPWISH 273 (444)
T ss_dssp HHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCC----HHHHHHSCTTHH
T ss_pred HHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCC----HHHHhcCccccC
Confidence 999999887766554 468999999999999999999999 999999999974
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-40 Score=363.27 Aligned_cols=227 Identities=23% Similarity=0.306 Sum_probs=170.8
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc-----------------------cccc----cCCeEEEEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----------------------NRNK----TKTHVCLIT 721 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~-----------------------~~~~----~~~~~~lV~ 721 (975)
++|.+.++||+|+||+||+|++ +|+.||||+++..... .... ...++||||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 4688999999999999999987 6899999998754210 0000 113689999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--------GIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~--------gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
|||+||+|.+++.. ..+++..+..++.|++.||+|||++ +||||||||+|||++.++.+||+|||+|+.
T Consensus 81 Ey~~~gsL~~~l~~---~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~ 157 (303)
T 3hmm_A 81 DYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp ECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred cCCCCCcHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence 99999999999987 4589999999999999999999987 999999999999999999999999999976
Q ss_pred cCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC------CCCChhHHHHHHHHHHHHHhC
Q 002051 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA------GHTSAVDWWALGILLYEMLYG 867 (975)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~------~~~~k~DIWSLG~il~ell~G 867 (975)
....... ........+||+.|||||++.+. .|+.++|||||||+||||++|
T Consensus 158 ~~~~~~~-----------------------~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg 214 (303)
T 3hmm_A 158 HDSATDT-----------------------IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 214 (303)
T ss_dssp EETTTTE-----------------------ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCc-----------------------eeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHC
Confidence 4321100 01122346899999999999765 356799999999999999999
Q ss_pred CCCCCCC---------------CHHHHHHHHHhcCCCCCCC-----CCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 868 YTPFRGK---------------TRQKTFANILHKDLKFPSS-----TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 868 ~~Pf~~~---------------~~~~~~~~i~~~~~~~p~~-----~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
.+||... ........+.......+.+ ...+..+.+||.+||+.||++||| +.||++
T Consensus 215 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt----~~ei~~ 290 (303)
T 3hmm_A 215 CSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT----ALRIKK 290 (303)
T ss_dssp BCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCC----HHHHHH
T ss_pred CCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcC----HHHHHH
Confidence 7765321 2233334444444332222 112346889999999999999999 666654
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=364.46 Aligned_cols=234 Identities=26% Similarity=0.429 Sum_probs=203.9
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-----------------------hccccccCCeEEEEEecc
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-----------------------MLNRNKTKTHVCLITDYC 724 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-----------------------~~~~~~~~~~~~lV~Ey~ 724 (975)
.++|++++.||+|+||.||+|.+..+++.||+|++.... +.....+..++|+|||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 83 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI 83 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence 468999999999999999999999999999999986431 112223678899999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec--CCcEEEeeccCCCccCCCCCCCC
Q 002051 725 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG--NGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 725 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~--~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
+|++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||++......
T Consensus 84 ~g~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~----- 157 (321)
T 1tki_A 84 SGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG----- 157 (321)
T ss_dssp CCCBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT-----
T ss_pred CCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC-----
Confidence 999999999753 346999999999999999999999999999999999999987 789999999999654311
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 882 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~ 882 (975)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..
T Consensus 158 -----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~ 214 (321)
T 1tki_A 158 -----------------------DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIEN 214 (321)
T ss_dssp -----------------------CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH
T ss_pred -----------------------CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHH
Confidence 112245789999999999998899999999999999999999999999999999999
Q ss_pred HHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 883 ILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 883 i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
+......++.. ..++.++.+||.+||..||.+||| +.|+|+||||+..
T Consensus 215 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt----~~e~l~hp~~~~~ 264 (321)
T 1tki_A 215 IMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMT----ASEALQHPWLKQK 264 (321)
T ss_dssp HHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHHSHHHHSC
T ss_pred HHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcC----HHHHhcChhhccC
Confidence 98887766542 467899999999999999999999 9999999999864
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-39 Score=355.91 Aligned_cols=236 Identities=26% Similarity=0.409 Sum_probs=193.1
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------c------------ccccc
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------L------------NRNKT 713 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------~------------~~~~~ 713 (975)
+..++|+++++||+|+||+||+|++..+++.||||++..... + .....
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 346789999999999999999999999999999999863210 0 00001
Q ss_pred -----CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeec
Q 002051 714 -----KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 788 (975)
Q Consensus 714 -----~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DF 788 (975)
..++|+||||+. ++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Df 164 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADF 164 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSC
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeC
Confidence 126899999995 69999998876666999999999999999999999999999999999999999999999999
Q ss_pred cCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCC
Q 002051 789 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGY 868 (975)
Q Consensus 789 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~ 868 (975)
|++...... ......+||+.|+|||++.+..++.++|||||||++|+|++|.
T Consensus 165 g~a~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~ 216 (308)
T 3g33_A 165 GLARIYSYQ----------------------------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216 (308)
T ss_dssp SCTTTSTTC----------------------------CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSS
T ss_pred ccccccCCC----------------------------cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCC
Confidence 999654311 1123457899999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHhcCCCCCC-------------------------CCCCcHHHHHHHHHhcccCccccCCChhhHH
Q 002051 869 TPFRGKTRQKTFANILHKDLKFPS-------------------------STPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 923 (975)
Q Consensus 869 ~Pf~~~~~~~~~~~i~~~~~~~p~-------------------------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~ 923 (975)
+||.+.+....+..+.......+. ...++..+.+||.+||++||.+||| +.
T Consensus 217 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~ 292 (308)
T 3g33_A 217 PLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRIS----AF 292 (308)
T ss_dssp CSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCC----HH
T ss_pred CCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCC----HH
Confidence 999999988888777652111110 1246788999999999999999999 99
Q ss_pred HHHcCCCccCC
Q 002051 924 EIKKHPFFKGV 934 (975)
Q Consensus 924 elL~Hp~f~~~ 934 (975)
|+|+||||+..
T Consensus 293 e~l~h~~~~~~ 303 (308)
T 3g33_A 293 RALQHSYLHKD 303 (308)
T ss_dssp HHHTSTTC---
T ss_pred HHhcCccccCC
Confidence 99999999864
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=367.25 Aligned_cols=237 Identities=29% Similarity=0.484 Sum_probs=201.0
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch---------------------hccccccCCeEEEEEeccCC
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV---------------------MLNRNKTKTHVCLITDYCPG 726 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~---------------------~~~~~~~~~~~~lV~Ey~~g 726 (975)
.++|++++.||+|+||.||+|.++.+|+.||||++.+.. +.....+..++|+|||||+|
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~g 100 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKG 100 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCC
Confidence 457999999999999999999999999999999987642 11222367889999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC----CcEEEeeccCCCccCCCCCCCC
Q 002051 727 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN----GHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 727 gsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~----g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
|+|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||+... +.+||+|||+++.....
T Consensus 101 g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~----- 173 (342)
T 2qr7_A 101 GELLDKILRQ--KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE----- 173 (342)
T ss_dssp CBHHHHHHTC--TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCT-----
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCC-----
Confidence 9999999874 569999999999999999999999999999999999999543 35999999999654311
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCC---CCHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG---KTRQKT 879 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~---~~~~~~ 879 (975)
.......+||+.|+|||++.+..|+.++|||||||++|+|++|..||.+ .+..++
T Consensus 174 ----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~ 231 (342)
T 2qr7_A 174 ----------------------NGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEI 231 (342)
T ss_dssp ----------------------TCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHH
T ss_pred ----------------------CCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHH
Confidence 1122346899999999999888889999999999999999999999986 456677
Q ss_pred HHHHHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchh
Q 002051 880 FANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 939 (975)
Q Consensus 880 ~~~i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~ 939 (975)
+..+..+.+.++.. ..++..+++||++||..||.+||| +.++|+||||.+ |..+
T Consensus 232 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t----~~~il~hp~~~~--~~~~ 287 (342)
T 2qr7_A 232 LARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLT----AALVLRHPWIVH--WDQL 287 (342)
T ss_dssp HHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCC----HHHHTTSHHHHT--GGGS
T ss_pred HHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcC----HHHHhcCCeecC--cccc
Confidence 88888877766543 468999999999999999999999 999999999954 5544
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-39 Score=370.67 Aligned_cols=256 Identities=27% Similarity=0.431 Sum_probs=188.2
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch---------------------------hcccc--ccCCeEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV---------------------------MLNRN--KTKTHVC 718 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~---------------------------~~~~~--~~~~~~~ 718 (975)
.++|++++.||+|+||.||+|.+..+|+.||||++.+.. +.... .+..++|
T Consensus 8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~ 87 (388)
T 3oz6_A 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY 87 (388)
T ss_dssp HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEE
T ss_pred cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEE
Confidence 568999999999999999999999999999999885321 00111 1345799
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
+|||||. ++|..++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.+....
T Consensus 88 lv~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 163 (388)
T 3oz6_A 88 LVFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163 (388)
T ss_dssp EEEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred EEecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence 9999995 699999976 469999999999999999999999999999999999999999999999999997654211
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
........ ...................+||+.|+|||++.+ ..|+.++|||||||++|+|++|++||.+.+..
T Consensus 164 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~ 237 (388)
T 3oz6_A 164 RVTNNIPL------SINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM 237 (388)
T ss_dssp CCCCCGGG------CCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred cccccccc------cccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 10000000 000000000111123345689999999999987 67899999999999999999999999999988
Q ss_pred HHHHHHHhcCCCCC----------------------------------------------CCCCCcHHHHHHHHHhcccC
Q 002051 878 KTFANILHKDLKFP----------------------------------------------SSTPTSLHAKQLMYRLLHRD 911 (975)
Q Consensus 878 ~~~~~i~~~~~~~p----------------------------------------------~~~~~s~~~~~li~~~L~~d 911 (975)
..+..++... ..| ....++.++.+||.+||++|
T Consensus 238 ~~~~~i~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~d 316 (388)
T 3oz6_A 238 NQLERIIGVI-DFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFN 316 (388)
T ss_dssp HHHHHHHHHH-CCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSS
T ss_pred HHHHHHHHhc-CCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccC
Confidence 8887775311 111 11256889999999999999
Q ss_pred ccccCCChhhHHHHHcCCCccCCCcch
Q 002051 912 PKSRLGSHEGANEIKKHPFFKGVNWAL 938 (975)
Q Consensus 912 P~~R~t~~~~~~elL~Hp~f~~~~~~~ 938 (975)
|.+||| ++|+|+||||+.+....
T Consensus 317 P~~R~t----~~e~l~Hp~~~~~~~~~ 339 (388)
T 3oz6_A 317 PNKRIS----ANDALKHPFVSIFHNPN 339 (388)
T ss_dssp GGGSCC----HHHHTTSTTTTTTCCGG
T ss_pred cccCCC----HHHHhCCHHHHHhcCCc
Confidence 999999 99999999998765443
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-39 Score=363.52 Aligned_cols=241 Identities=27% Similarity=0.444 Sum_probs=203.6
Q ss_pred CCcccc-cccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEE
Q 002051 669 QHFRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLI 720 (975)
Q Consensus 669 ~~y~i~-~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV 720 (975)
++|.+. +.||+|+||.||+|.++.+++.||+|++.+... .........+|+|
T Consensus 28 ~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv 107 (327)
T 3lm5_A 28 NFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILI 107 (327)
T ss_dssp HHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEE
Confidence 457777 899999999999999999999999999875321 1112257789999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec---CCcEEEeeccCCCccCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~---~g~vkL~DFG~a~~~~~~ 797 (975)
||||.||+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++......
T Consensus 108 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 187 (327)
T 3lm5_A 108 LEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA 187 (327)
T ss_dssp EECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---
T ss_pred EEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCc
Confidence 99999999999987655577999999999999999999999999999999999999987 789999999999654311
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus 188 ----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~ 239 (327)
T 3lm5_A 188 ----------------------------CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ 239 (327)
T ss_dssp ----------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ----------------------------cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch
Confidence 1122357999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHhcCCCCCC--CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhc
Q 002051 878 KTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRC 941 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~--~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~ 941 (975)
..+..+......++. ...++..+.+||.+||++||.+||| ++++|+||||++++|..+..
T Consensus 240 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~~ll~h~~~~~~~~~~~~~ 301 (327)
T 3lm5_A 240 ETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPT----AEICLSHSWLQQWDFENLFH 301 (327)
T ss_dssp HHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCC----HHHHTTCGGGCCCCTTCC--
T ss_pred HHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcC----HHHHhCCHhhcccccccccC
Confidence 888888776555443 3568899999999999999999999 99999999999999986644
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-39 Score=370.87 Aligned_cols=249 Identities=20% Similarity=0.317 Sum_probs=196.9
Q ss_pred ccCCCcccccccccC--CceEEEEEEEeCCCeEEEEEEeccch--------------------------hccccccCCeE
Q 002051 666 INLQHFRPIKPLGSG--DTGSVHLVELCGSGQYFAMKAMDKGV--------------------------MLNRNKTKTHV 717 (975)
Q Consensus 666 i~~~~y~i~~~LG~G--~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------------~~~~~~~~~~~ 717 (975)
...++|++++.||+| +||.||+|+++.+|+.||||++.... +.........+
T Consensus 22 ~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 101 (389)
T 3gni_B 22 PEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNEL 101 (389)
T ss_dssp CCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred CCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEE
Confidence 356789999999999 99999999999999999999987542 11222367789
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|+|||||++|+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||.+......
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~ 181 (389)
T 3gni_B 102 WVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISH 181 (389)
T ss_dssp EEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEET
T ss_pred EEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeeccc
Confidence 99999999999999998865667999999999999999999999999999999999999999999999999988543211
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC--CCCCChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
.... ..........+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+
T Consensus 182 ~~~~--------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 241 (389)
T 3gni_B 182 GQRQ--------------------RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP 241 (389)
T ss_dssp TEEC--------------------SCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred cccc--------------------cccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC
Confidence 1000 000112234579999999999988 578999999999999999999999998866
Q ss_pred HHHHHHHHHhcCCC--------------------------------------------CCCCCCCcHHHHHHHHHhcccC
Q 002051 876 RQKTFANILHKDLK--------------------------------------------FPSSTPTSLHAKQLMYRLLHRD 911 (975)
Q Consensus 876 ~~~~~~~i~~~~~~--------------------------------------------~p~~~~~s~~~~~li~~~L~~d 911 (975)
....+..+..+... .+....++..+.+||.+||++|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~d 321 (389)
T 3gni_B 242 ATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRN 321 (389)
T ss_dssp STTHHHHC--------------------------------------------------------CCHHHHHHHHHHTCSC
T ss_pred HHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcC
Confidence 55554443322111 1122346788999999999999
Q ss_pred ccccCCChhhHHHHHcCCCccCCCcch
Q 002051 912 PKSRLGSHEGANEIKKHPFFKGVNWAL 938 (975)
Q Consensus 912 P~~R~t~~~~~~elL~Hp~f~~~~~~~ 938 (975)
|.+||| +.|+|+||||+.+.+..
T Consensus 322 P~~Rpt----a~ell~hp~f~~~~~~~ 344 (389)
T 3gni_B 322 PDARPS----ASTLLNHSFFKQIKRRA 344 (389)
T ss_dssp TTTSCC----HHHHTTSGGGGGC---C
T ss_pred cccCCC----HHHHhcCHHHHHHhhcc
Confidence 999999 99999999999988753
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-39 Score=365.66 Aligned_cols=233 Identities=27% Similarity=0.442 Sum_probs=195.4
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch----------------------------hccccccCCe
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV----------------------------MLNRNKTKTH 716 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~----------------------------~~~~~~~~~~ 716 (975)
.+..++|+++++||+|+||+||+|++..+++.||||++.... +........+
T Consensus 31 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~ 110 (360)
T 3llt_A 31 MLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDH 110 (360)
T ss_dssp CEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTE
T ss_pred eEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCe
Confidence 445689999999999999999999999999999999986421 0111125678
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-----------------
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG----------------- 779 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~----------------- 779 (975)
+|+||||| +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 111 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~ 189 (360)
T 3llt_A 111 MCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGK 189 (360)
T ss_dssp EEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCC
T ss_pred eEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccc
Confidence 99999999 999999999876667999999999999999999999999999999999999975
Q ss_pred --------CCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCCh
Q 002051 780 --------NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSA 851 (975)
Q Consensus 780 --------~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k 851 (975)
++.+||+|||++..... .....+||+.|+|||++.+..++.+
T Consensus 190 ~~~~~~~~~~~~kl~DFG~a~~~~~------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~ 239 (360)
T 3llt_A 190 KIQIYRTKSTGIKLIDFGCATFKSD------------------------------YHGSIINTRQYRAPEVILNLGWDVS 239 (360)
T ss_dssp EEEEEEESCCCEEECCCTTCEETTS------------------------------CCCSCCSCGGGCCHHHHTTCCCCTT
T ss_pred cccccccCCCCEEEEeccCceecCC------------------------------CCcCccCcccccCcHHHcCCCCCCc
Confidence 78899999999854321 1234578999999999999999999
Q ss_pred hHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCC--------------------------CC-----------
Q 002051 852 VDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPS--------------------------ST----------- 894 (975)
Q Consensus 852 ~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~--------------------------~~----------- 894 (975)
+|||||||++|+|++|+.||.+.+..+.+..+......+|. ..
T Consensus 240 ~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 319 (360)
T 3llt_A 240 SDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKK 319 (360)
T ss_dssp HHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhh
Confidence 99999999999999999999998887777666543222221 00
Q ss_pred -------CCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCcc
Q 002051 895 -------PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932 (975)
Q Consensus 895 -------~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~ 932 (975)
..+..+.+||.+||++||.+||| +.|+|+||||+
T Consensus 320 ~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt----a~elL~hp~f~ 360 (360)
T 3llt_A 320 CLPLYKIIKHELFCDFLYSILQIDPTLRPS----PAELLKHKFLE 360 (360)
T ss_dssp CCCHHHHCCCHHHHHHHHHHCCSSGGGSCC----HHHHTTSGGGC
T ss_pred cccccccchHHHHHHHHHHHhcCChhhCCC----HHHHhcCcccC
Confidence 12367789999999999999999 99999999995
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-39 Score=365.71 Aligned_cols=232 Identities=28% Similarity=0.501 Sum_probs=202.2
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~lV~ 721 (975)
.++|++.+.||+|+||.||+|.++.+|+.||+|++..... .....+..++|+||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 3579999999999999999999999999999999865321 11223677899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC---cEEEeeccCCCccCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g---~vkL~DFG~a~~~~~~~ 798 (975)
|||.||+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||++......
T Consensus 108 e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~- 184 (362)
T 2bdw_A 108 DLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS- 184 (362)
T ss_dssp CCCCSCBHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC-
T ss_pred ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCC-
Confidence 999999999999764 5699999999999999999999999999999999999998654 5999999998654311
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~ 878 (975)
......+||+.|+|||++.+..|+.++|||||||++|+|++|.+||.+.+...
T Consensus 185 ---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~ 237 (362)
T 2bdw_A 185 ---------------------------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR 237 (362)
T ss_dssp ---------------------------CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred ---------------------------cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH
Confidence 11234679999999999999999999999999999999999999999999989
Q ss_pred HHHHHHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 879 TFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 879 ~~~~i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
.+..+..+.+.++.. ..++..+.+||.+||.+||.+||| +.++|+||||..
T Consensus 238 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l~hp~~~~ 290 (362)
T 2bdw_A 238 LYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRIT----ADQALKVPWICN 290 (362)
T ss_dssp HHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCC----HHHHTTSHHHHT
T ss_pred HHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcC----HHHHhcCcccCC
Confidence 998888887776654 457899999999999999999999 999999999975
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-39 Score=374.02 Aligned_cols=234 Identities=26% Similarity=0.452 Sum_probs=189.5
Q ss_pred CCCcccc-cccccCCceEEEEEEEeCCCeEEEEEEeccch--------------------hcccc----ccCCeEEEEEe
Q 002051 668 LQHFRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------------MLNRN----KTKTHVCLITD 722 (975)
Q Consensus 668 ~~~y~i~-~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------~~~~~----~~~~~~~lV~E 722 (975)
.++|.++ +.||+|+||+||+|.++.+|+.||||++.... +.... ....++|||||
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E 139 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME 139 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcchhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEE
Confidence 4578887 78999999999999999999999999986431 01111 12567899999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec---CCcEEEeeccCCCccCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~---~g~vkL~DFG~a~~~~~~~~ 799 (975)
||+||+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||+++.....
T Consensus 140 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~-- 217 (400)
T 1nxk_A 140 CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH-- 217 (400)
T ss_dssp CCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC----
T ss_pred eCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCCC--
Confidence 999999999998765567999999999999999999999999999999999999997 788999999998653211
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHH-
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK- 878 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~- 878 (975)
......+||+.|+|||++.+..|+.++|||||||++|+|++|..||.+.+...
T Consensus 218 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~ 271 (400)
T 1nxk_A 218 --------------------------NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 271 (400)
T ss_dssp -----------------------------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSS
T ss_pred --------------------------CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccc
Confidence 11234689999999999999999999999999999999999999998754322
Q ss_pred ---HHHHHHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 879 ---TFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 879 ---~~~~i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
....+..+.+.++.. ..++.++.+||++||+.||.+||| +.++|+||||..
T Consensus 272 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt----~~eil~hp~~~~ 327 (400)
T 1nxk_A 272 SPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWIMQ 327 (400)
T ss_dssp CCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHHSHHHHT
T ss_pred cHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcC----HHHHhcCccccC
Confidence 445566666555543 568999999999999999999999 999999999975
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-39 Score=356.92 Aligned_cols=238 Identities=23% Similarity=0.407 Sum_probs=192.9
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------------------hccccccCCeEEE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------------------MLNRNKTKTHVCL 719 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------------~~~~~~~~~~~~l 719 (975)
-..++|+++++||+|+||+||+|++. +|+.||+|++.... +.....+..++|+
T Consensus 18 ~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 96 (311)
T 3niz_A 18 GLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTL 96 (311)
T ss_dssp CSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEE
T ss_pred chHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEE
Confidence 34678999999999999999999995 58999999986431 1122236778999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
|||||+ ++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 97 v~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~-- 172 (311)
T 3niz_A 97 VFEFME-KDLKKVLDEN-KTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIP-- 172 (311)
T ss_dssp EEECCS-EEHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSC--
T ss_pred EEcCCC-CCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCC--
Confidence 999996 5898888764 346999999999999999999999999999999999999999999999999999654311
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~ 878 (975)
.......+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+
T Consensus 173 -------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~ 227 (311)
T 3niz_A 173 -------------------------VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD 227 (311)
T ss_dssp -------------------------CC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT
T ss_pred -------------------------cccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH
Confidence 111234578999999999977 568999999999999999999999999877766
Q ss_pred HHHHHHhcCCCC-------------------C---------CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCC
Q 002051 879 TFANILHKDLKF-------------------P---------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930 (975)
Q Consensus 879 ~~~~i~~~~~~~-------------------p---------~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~ 930 (975)
.+..+....... . ....++.++.+||.+||++||.+||| ++|+|+|||
T Consensus 228 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~hp~ 303 (311)
T 3niz_A 228 QLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRIS----ARDAMNHPY 303 (311)
T ss_dssp HHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCC----HHHHHTSGG
T ss_pred HHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCC----HHHHhcCcc
Confidence 666654411000 0 01235788999999999999999999 999999999
Q ss_pred ccCCCcc
Q 002051 931 FKGVNWA 937 (975)
Q Consensus 931 f~~~~~~ 937 (975)
|++++++
T Consensus 304 f~~~~~~ 310 (311)
T 3niz_A 304 FKDLDPQ 310 (311)
T ss_dssp GTTSCTT
T ss_pred cccCCcc
Confidence 9998764
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-39 Score=364.97 Aligned_cols=234 Identities=31% Similarity=0.503 Sum_probs=191.8
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-----------------------hccccccCCeEEEEEe
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-----------------------MLNRNKTKTHVCLITD 722 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-----------------------~~~~~~~~~~~~lV~E 722 (975)
...++|++++.||+|+||+||+|+++.+++.||||++.+.. +........++|+|||
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 17 HDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp CCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 45678999999999999999999999999999999987532 1122236788999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc--EEEeeccCCCccCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH--VSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~--vkL~DFG~a~~~~~~~~~ 800 (975)
||+||+|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.++. +||+|||+++.....
T Consensus 97 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~--- 171 (361)
T 3uc3_A 97 YASGGELYERICNA--GRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH--- 171 (361)
T ss_dssp CCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC---------
T ss_pred eCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCcccccccc---
Confidence 99999999999764 46999999999999999999999999999999999999987765 999999998532210
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCCh-hHHHHHHHHHHHHHhCCCCCCCCC----
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSA-VDWWALGILLYEMLYGYTPFRGKT---- 875 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k-~DIWSLG~il~ell~G~~Pf~~~~---- 875 (975)
......+||+.|+|||++.+..++.+ +|||||||++|+|++|+.||.+..
T Consensus 172 -------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~ 226 (361)
T 3uc3_A 172 -------------------------SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD 226 (361)
T ss_dssp ----------------------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC
T ss_pred -------------------------CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH
Confidence 11234579999999999988887665 899999999999999999998743
Q ss_pred HHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 876 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 876 ~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
....+..+......+|....++..+.+||.+||++||.+||| +.||++||||..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps----~~ell~hp~f~~ 280 (361)
T 3uc3_A 227 YRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRIS----IPEIKTHSWFLK 280 (361)
T ss_dssp HHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCC----HHHHHTSHHHHT
T ss_pred HHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcC----HHHHHhCcchhc
Confidence 345666677777777777778999999999999999999999 999999999953
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-39 Score=356.59 Aligned_cols=235 Identities=30% Similarity=0.547 Sum_probs=197.8
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc-----------------------------------
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML----------------------------------- 708 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~----------------------------------- 708 (975)
..+..++|++.+.||+|+||.||+|.+..+++.||||++.+....
T Consensus 8 ~~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~ 87 (298)
T 2zv2_A 8 DCVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEI 87 (298)
T ss_dssp --CEETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHH
T ss_pred CceeecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHH
Confidence 345678999999999999999999999999999999998653211
Q ss_pred ---------------cccc--cCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCC
Q 002051 709 ---------------NRNK--TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLK 771 (975)
Q Consensus 709 ---------------~~~~--~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIK 771 (975)
.... ...++|+|||||++++|.+++.. ..+++..++.++.||+.||.|||++||+|||||
T Consensus 88 ~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlk 164 (298)
T 2zv2_A 88 AILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIK 164 (298)
T ss_dssp HHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred HHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCC
Confidence 0001 25689999999999999876543 569999999999999999999999999999999
Q ss_pred CCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC---C
Q 002051 772 PENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG---H 848 (975)
Q Consensus 772 p~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~---~ 848 (975)
|+|||++.++.+||+|||++....... .......||+.|+|||++.+.. +
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~ 217 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSD---------------------------ALLSNTVGTPAFMAPESLSETRKIFS 217 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSS---------------------------CEECCCCSCGGGCCGGGCCTTCCCEE
T ss_pred HHHEEECCCCCEEEecCCCcccccccc---------------------------ccccCCcCCccccChhhhccCCCCCC
Confidence 999999999999999999986543111 1122457999999999998765 3
Q ss_pred CChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 849 TSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 849 ~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
+.++|||||||++|+|++|..||.+.........+......++....++..+.+||.+||+.||.+||| +.|+|+|
T Consensus 218 ~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s----~~e~l~h 293 (298)
T 2zv2_A 218 GKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIV----VPEIKLH 293 (298)
T ss_dssp SHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCC----HHHHTTC
T ss_pred CchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCC----HHHHhcC
Confidence 678999999999999999999999988888888888877777777778999999999999999999999 9999999
Q ss_pred CCcc
Q 002051 929 PFFK 932 (975)
Q Consensus 929 p~f~ 932 (975)
|||+
T Consensus 294 p~~~ 297 (298)
T 2zv2_A 294 PWVT 297 (298)
T ss_dssp HHHH
T ss_pred cccc
Confidence 9996
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=351.26 Aligned_cols=234 Identities=22% Similarity=0.417 Sum_probs=190.4
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------------------hccccccCCeEEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------------------MLNRNKTKTHVCLIT 721 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------------~~~~~~~~~~~~lV~ 721 (975)
+++|+++++||+|+||+||+|.+..+++.||+|++.... +.....+..++||||
T Consensus 1 l~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (292)
T 3o0g_A 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_dssp CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEE
Confidence 368999999999999999999999999999999986432 111222677899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
|||. ++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 e~~~-~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 154 (292)
T 3o0g_A 81 EFCD-QDLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP---- 154 (292)
T ss_dssp ECCS-EEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSC----
T ss_pred ecCC-CCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCc----
Confidence 9995 4777666553 356999999999999999999999999999999999999999999999999999654311
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC-CCChhHHHHHHHHHHHHHhCCCC-CCCCCHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTP-FRGKTRQKT 879 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~~~k~DIWSLG~il~ell~G~~P-f~~~~~~~~ 879 (975)
........||+.|+|||++.+.. ++.++|||||||++|+|++|..| |.+.+....
T Consensus 155 -----------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~ 211 (292)
T 3o0g_A 155 -----------------------VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ 211 (292)
T ss_dssp -----------------------CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHH
T ss_pred -----------------------cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHH
Confidence 11223457899999999998765 79999999999999999987766 666676676
Q ss_pred HHHHHhcCCCC---------------------------CCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCcc
Q 002051 880 FANILHKDLKF---------------------------PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932 (975)
Q Consensus 880 ~~~i~~~~~~~---------------------------p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~ 932 (975)
+..+....... .....++..+++||.+||++||++||| ++|+|+||||+
T Consensus 212 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l~hp~f~ 287 (292)
T 3o0g_A 212 LKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRIS----AEEALQHPYFS 287 (292)
T ss_dssp HHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCC----HHHHHTSGGGT
T ss_pred HHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCC----HHHHhcCcccc
Confidence 66665421100 011246789999999999999999999 99999999998
Q ss_pred CC
Q 002051 933 GV 934 (975)
Q Consensus 933 ~~ 934 (975)
++
T Consensus 288 ~~ 289 (292)
T 3o0g_A 288 DF 289 (292)
T ss_dssp TC
T ss_pred cC
Confidence 64
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=373.98 Aligned_cols=276 Identities=22% Similarity=0.291 Sum_probs=184.7
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------------------hcccc-----ccCCe
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------------------MLNRN-----KTKTH 716 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------------~~~~~-----~~~~~ 716 (975)
.++|++++.||+|+||+||+|+++.+++.||||++.+.. ++... ....+
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 468999999999999999999999999999999986421 01111 13367
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
+|+||||+ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 208 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRTP--VYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDY 208 (458)
T ss_dssp EEEEECCC-SEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred EEEEEecc-ccchhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccC
Confidence 99999999 67999999764 5699999999999999999999999999999999999999999999999999987643
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhh-cCCCCCChhHHHHHHHHHHHHHh---------
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII-AGAGHTSAVDWWALGILLYEMLY--------- 866 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l-~~~~~~~k~DIWSLG~il~ell~--------- 866 (975)
...................................+||+.|+|||++ .+..|+.++|||||||++|+|++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~ 288 (458)
T 3rp9_A 209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYH 288 (458)
T ss_dssp CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSG
T ss_pred ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccccc
Confidence 22110000000000000000000000001223456899999999986 45679999999999999999998
Q ss_pred --CCCCCCCCCH--------------------HHHHHHHHhc----------------------CCCC-------CCCCC
Q 002051 867 --GYTPFRGKTR--------------------QKTFANILHK----------------------DLKF-------PSSTP 895 (975)
Q Consensus 867 --G~~Pf~~~~~--------------------~~~~~~i~~~----------------------~~~~-------p~~~~ 895 (975)
|+++|.+.+. .+.+..+... .++. .....
T Consensus 289 ~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (458)
T 3rp9_A 289 ADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPA 368 (458)
T ss_dssp GGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTT
T ss_pred ccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCC
Confidence 7888876542 2222222210 0000 01134
Q ss_pred CcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhccCCCCCCCC
Q 002051 896 TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAP 950 (975)
Q Consensus 896 ~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~~~~~~~~~p 950 (975)
.+.++.+||++||.+||.+||| ++|+|+||||++++|..........+..|
T Consensus 369 ~s~~~~dLl~~mL~~dP~~R~t----~~e~L~Hp~f~~~~~~~~e~~~~~~~~~~ 419 (458)
T 3rp9_A 369 SSADAIHLLKRMLVFNPNKRIT----INECLAHPFFKEVRIAEVETNATEKVRLP 419 (458)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCC----HHHHHHSGGGTTTCCGGGCCCCSSCCCCS
T ss_pred CCHHHHHHHHHHhccCccccCC----HHHHhcCHhhhhcCCCccCCCCCCCCCCC
Confidence 5889999999999999999999 99999999999999987755444433334
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-39 Score=360.41 Aligned_cols=238 Identities=25% Similarity=0.441 Sum_probs=196.8
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-------------------------hccccccCCeEEEEEe
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------------------MLNRNKTKTHVCLITD 722 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------------------~~~~~~~~~~~~lV~E 722 (975)
.++|++++.||+|+||+||+|.+..+++.||||++.... +........+.|+|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999999999999999985432 1122236778999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
||+|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..+....
T Consensus 86 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~---- 159 (323)
T 3tki_A 86 YCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN---- 159 (323)
T ss_dssp CCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETT----
T ss_pred cCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCC----
Confidence 99999999998764 569999999999999999999999999999999999999999999999999996543111
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCC-CChhHHHHHHHHHHHHHhCCCCCCCCCHH-HHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQ-KTF 880 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-~~k~DIWSLG~il~ell~G~~Pf~~~~~~-~~~ 880 (975)
........+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.... ..+
T Consensus 160 ---------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~ 218 (323)
T 3tki_A 160 ---------------------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218 (323)
T ss_dssp ---------------------EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHH
T ss_pred ---------------------cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHH
Confidence 0112235689999999999988765 67899999999999999999999876554 333
Q ss_pred HHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCc
Q 002051 881 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936 (975)
Q Consensus 881 ~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~ 936 (975)
..........+....++..+.+||.+||++||.+||| +.|+++||||+..-.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~eil~h~~~~~~~~ 270 (323)
T 3tki_A 219 SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT----IPDIKKDRWYNKPLK 270 (323)
T ss_dssp HHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCC----HHHHTTCTTTTCCCC
T ss_pred HHHhcccccCCccccCCHHHHHHHHHHccCChhhCcC----HHHHhhChhhccccc
Confidence 3334444444444568899999999999999999999 999999999986533
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-39 Score=359.00 Aligned_cols=238 Identities=21% Similarity=0.328 Sum_probs=192.0
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEEE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCL 719 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~l 719 (975)
...++|+++++||+|+||+||+|.+..+++.||||++..... ........++||
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 446789999999999999999999999999999999864321 111226778999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe-----cCCcEEEeeccCCCcc
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-----GNGHVSLTDFDLSCLT 794 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~-----~~g~vkL~DFG~a~~~ 794 (975)
|||||. |+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++...
T Consensus 111 v~e~~~-~~L~~~~~~~--~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~ 187 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDKN--PDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF 187 (329)
T ss_dssp EEECCS-EEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHH
T ss_pred EEecCC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCcccc
Confidence 999996 5999999875 4599999999999999999999999999999999999995 4456999999998654
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCC
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRG 873 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~ 873 (975)
... .......+||+.|+|||++.+. .++.++|||||||++|+|++|..||.+
T Consensus 188 ~~~---------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 240 (329)
T 3gbz_A 188 GIP---------------------------IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPG 240 (329)
T ss_dssp C--------------------------------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCc---------------------------ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence 311 1112345789999999999875 489999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCCCCC------------------CC----------CCCcHHHHHHHHHhcccCccccCCChhhHHHH
Q 002051 874 KTRQKTFANILHKDLKFP------------------SS----------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 925 (975)
Q Consensus 874 ~~~~~~~~~i~~~~~~~p------------------~~----------~~~s~~~~~li~~~L~~dP~~R~t~~~~~~el 925 (975)
.+..+.+..+.......+ .. ..++.++.+||.+||++||.+||| ++|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~ 316 (329)
T 3gbz_A 241 DSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRIS----AKNA 316 (329)
T ss_dssp SSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCC----HHHH
T ss_pred CCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCC----HHHH
Confidence 988888777765211100 00 015788999999999999999999 9999
Q ss_pred HcCCCccCCCcc
Q 002051 926 KKHPFFKGVNWA 937 (975)
Q Consensus 926 L~Hp~f~~~~~~ 937 (975)
|+||||++.+|.
T Consensus 317 l~hp~f~~~~~~ 328 (329)
T 3gbz_A 317 LEHPYFSHNDFD 328 (329)
T ss_dssp HTSGGGSSSCSC
T ss_pred hCCcccCCCCCC
Confidence 999999999985
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=354.84 Aligned_cols=238 Identities=24% Similarity=0.397 Sum_probs=182.4
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-------------------------hccccccCCeEEEEEe
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------------------MLNRNKTKTHVCLITD 722 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------------------~~~~~~~~~~~~lV~E 722 (975)
.++|++++.||+|+||.||+|.++.+|+.||+|++.... +.......+.+|||||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 468999999999999999999999999999999986431 1122236778999999
Q ss_pred ccCCCCHHHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 723 YCPGGELFLLLDRQP----TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 723 y~~ggsL~~~l~~~~----~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
||+ ++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 162 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV 162 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCC
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCc
Confidence 996 69999987531 2358999999999999999999999999999999999999999999999999986543110
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
......+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..
T Consensus 163 ---------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~ 215 (317)
T 2pmi_A 163 ---------------------------NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE 215 (317)
T ss_dssp ---------------------------CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred ---------------------------ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH
Confidence 11234578999999999987 46899999999999999999999999998888
Q ss_pred HHHHHHHhcCCCC--------------------------------CCCCCCcHHHHHHHHHhcccCccccCCChhhHHHH
Q 002051 878 KTFANILHKDLKF--------------------------------PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 925 (975)
Q Consensus 878 ~~~~~i~~~~~~~--------------------------------p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~el 925 (975)
+.+..+....... .....++..+.+||.+||++||.+||| +.|+
T Consensus 216 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt----~~e~ 291 (317)
T 2pmi_A 216 EQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLS----AKQA 291 (317)
T ss_dssp HHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCC----HHHH
T ss_pred HHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCC----HHHH
Confidence 8777765421000 001246789999999999999999999 9999
Q ss_pred HcCCCccCCCcc
Q 002051 926 KKHPFFKGVNWA 937 (975)
Q Consensus 926 L~Hp~f~~~~~~ 937 (975)
|+||||++..+.
T Consensus 292 l~hp~f~~~~~~ 303 (317)
T 2pmi_A 292 LHHPWFAEYYHH 303 (317)
T ss_dssp TTSGGGGGGCC-
T ss_pred hCChhhhcccch
Confidence 999999987665
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-38 Score=345.64 Aligned_cols=245 Identities=27% Similarity=0.465 Sum_probs=209.4
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~lV~ 721 (975)
.++|++.+.||+|+||.||+|.++.+++.||+|++..... ..........|+||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 4689999999999999999999999999999999865421 11222677889999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc---EEEeeccCCCccCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH---VSLTDFDLSCLTSCKP 798 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~---vkL~DFG~a~~~~~~~ 798 (975)
||++|++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++. +||+|||++......
T Consensus 85 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~- 161 (284)
T 3kk8_A 85 DLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS- 161 (284)
T ss_dssp CCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS-
T ss_pred ecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC-
Confidence 999999999988774 56999999999999999999999999999999999999986655 999999998554311
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~ 878 (975)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+...
T Consensus 162 ---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~ 214 (284)
T 3kk8_A 162 ---------------------------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR 214 (284)
T ss_dssp ---------------------------CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred ---------------------------ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH
Confidence 11234578999999999999999999999999999999999999999999988
Q ss_pred HHHHHHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhccCCCC
Q 002051 879 TFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPE 946 (975)
Q Consensus 879 ~~~~i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~~~~~~ 946 (975)
....+......++.. ..+++.+.+||.+||++||.+||| +.|+|+||||++.++......+...
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~~l~h~~~~~~~~~~~~~~~~~~ 280 (284)
T 3kk8_A 215 LYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRIT----ADQALKVPWICNRERVASAIHRQDT 280 (284)
T ss_dssp HHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCC----HHHHTTSHHHHSCCCGGGSCCCCCC
T ss_pred HHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCC----HHHHhcCccccCChhHHhHhhcCCC
Confidence 888888876665543 468899999999999999999999 9999999999988776655444443
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=363.67 Aligned_cols=236 Identities=28% Similarity=0.473 Sum_probs=203.1
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEEec
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITDY 723 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~Ey 723 (975)
.++|++++.||+|+||.||+|.++.+|+.||+|++.... +.....+...+|+||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 468999999999999999999999999999999986531 11222367889999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec--CCcEEEeeccCCCccCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG--NGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~--~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
|.||+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++......
T Consensus 130 ~~gg~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~---- 204 (387)
T 1kob_A 130 LSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD---- 204 (387)
T ss_dssp CCCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT----
T ss_pred CCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCC----
Confidence 9999999998753 346999999999999999999999999999999999999974 467999999999654311
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~ 881 (975)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+.
T Consensus 205 ------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~ 260 (387)
T 1kob_A 205 ------------------------EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQ 260 (387)
T ss_dssp ------------------------SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH
T ss_pred ------------------------cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHH
Confidence 11123479999999999999999999999999999999999999999999888888
Q ss_pred HHHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCc
Q 002051 882 NILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936 (975)
Q Consensus 882 ~i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~ 936 (975)
.+......++.. ..++..+.+||.+||+.||.+||| +.++|+||||++..+
T Consensus 261 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt----~~ell~hp~~~~~~~ 313 (387)
T 1kob_A 261 NVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLT----VHDALEHPWLKGDHS 313 (387)
T ss_dssp HHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHTSTTTSSCCT
T ss_pred HHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcC----HHHHhhCccccCCcc
Confidence 888876655433 468999999999999999999999 999999999987644
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=356.10 Aligned_cols=239 Identities=24% Similarity=0.404 Sum_probs=192.8
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-------------------------ccccccCCeEEEEEe
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-------------------------LNRNKTKTHVCLITD 722 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-------------------------~~~~~~~~~~~lV~E 722 (975)
+++|++++.||+|+||+||+|.+..+++.||+|++..... .........+|+|||
T Consensus 1 l~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CCSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CCceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 3689999999999999999999999999999998864321 112226778999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
||. |+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~----- 153 (324)
T 3mtl_A 81 YLD-KDLKQYLDDC-GNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP----- 153 (324)
T ss_dssp CCS-EEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC--------
T ss_pred ccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCC-----
Confidence 995 6999998875 346999999999999999999999999999999999999999999999999998643211
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~ 881 (975)
.......+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+.
T Consensus 154 ----------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~ 211 (324)
T 3mtl_A 154 ----------------------TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLH 211 (324)
T ss_dssp -------------------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred ----------------------ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 111234578999999999987 568999999999999999999999999998888777
Q ss_pred HHHhcCCCC-------------------CC---------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 882 NILHKDLKF-------------------PS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 882 ~i~~~~~~~-------------------p~---------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
.+....... +. ...++..+.+||.+||++||.+||| ++|+|+||||.+
T Consensus 212 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l~hp~f~~ 287 (324)
T 3mtl_A 212 FIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRIS----AEDAMKHPFFLS 287 (324)
T ss_dssp HHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCC----HHHHTTSGGGGG
T ss_pred HHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCC----HHHHhcChhhhh
Confidence 765521111 00 1246788999999999999999999 999999999998
Q ss_pred CCcchh
Q 002051 934 VNWALV 939 (975)
Q Consensus 934 ~~~~~~ 939 (975)
+.....
T Consensus 288 ~~~~~~ 293 (324)
T 3mtl_A 288 LGERIH 293 (324)
T ss_dssp GCSTTS
T ss_pred cccccc
Confidence 765433
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=364.96 Aligned_cols=230 Identities=32% Similarity=0.523 Sum_probs=193.0
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEE
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCL 719 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~l 719 (975)
..++|++.+.||+|+||.||+|.+..+++.||||++.+... .........+|+
T Consensus 7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 35789999999999999999999999999999999865321 112226778999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
||||+ +|+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 87 v~E~~-~g~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~-- 161 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG-- 161 (336)
T ss_dssp EECCC-CEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS--
T ss_pred EEECC-CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCC--
Confidence 99999 78999998764 56999999999999999999999999999999999999999999999999998654311
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCC-CChhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQK 878 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-~~k~DIWSLG~il~ell~G~~Pf~~~~~~~ 878 (975)
......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.....
T Consensus 162 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~ 215 (336)
T 3h4j_B 162 --------------------------NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN 215 (336)
T ss_dssp --------------------------BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT
T ss_pred --------------------------cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH
Confidence 11234579999999999998876 679999999999999999999998765444
Q ss_pred HHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 879 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 879 ~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
....+......+| ..+++.+.+||++||+.||.+||| ++|+++||||+.
T Consensus 216 ~~~~i~~~~~~~p--~~~s~~~~~li~~~L~~dP~~Rpt----~~eil~hp~~~~ 264 (336)
T 3h4j_B 216 LFKKVNSCVYVMP--DFLSPGAQSLIRRMIVADPMQRIT----IQEIRRDPWFNV 264 (336)
T ss_dssp CBCCCCSSCCCCC--TTSCHHHHHHHHTTSCSSGGGSCC----HHHHTTCHHHHT
T ss_pred HHHHHHcCCCCCc--ccCCHHHHHHHHHHcCCChhHCcC----HHHHHhChhhcc
Confidence 3333333333333 447899999999999999999999 999999999975
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-38 Score=354.39 Aligned_cols=239 Identities=30% Similarity=0.479 Sum_probs=206.8
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh------------------------------ccccccCCeE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM------------------------------LNRNKTKTHV 717 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~------------------------------~~~~~~~~~~ 717 (975)
.++|++.+.||+|+||.||+|.++.+|+.||+|++.+... .........+
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 3579999999999999999999999999999999865321 1112256789
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC----cEEEeeccCCCc
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG----HVSLTDFDLSCL 793 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g----~vkL~DFG~a~~ 793 (975)
|+|||||+|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++..
T Consensus 91 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~ 168 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEE
T ss_pred EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCcccee
Confidence 9999999999999999864 5699999999999999999999999999999999999999887 799999999865
Q ss_pred cCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCC
Q 002051 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 873 (975)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~ 873 (975)
.... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus 169 ~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 220 (321)
T 2a2a_A 169 IEDG----------------------------VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220 (321)
T ss_dssp CCTT----------------------------CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred cCcc----------------------------ccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCC
Confidence 4311 112345799999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhh
Q 002051 874 KTRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 940 (975)
Q Consensus 874 ~~~~~~~~~i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~ 940 (975)
.+..+.+..+......++.. ...+..+.+||.+||..||.+||| +.++|+||||++++|....
T Consensus 221 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~e~l~hp~~~~~~~~~~~ 285 (321)
T 2a2a_A 221 DTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLT----IQEALRHPWITPVDNQQAM 285 (321)
T ss_dssp SSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCC----HHHHHHSTTTSCSSHHHHH
T ss_pred CCHHHHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcC----HHHHhcCccccCCCccccc
Confidence 99888888888776655432 457889999999999999999999 9999999999999987653
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-38 Score=357.23 Aligned_cols=236 Identities=32% Similarity=0.506 Sum_probs=191.9
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch----------------------hccccccCCeEEEEEecc
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV----------------------MLNRNKTKTHVCLITDYC 724 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~----------------------~~~~~~~~~~~~lV~Ey~ 724 (975)
..++|++.+.||+|+||.||+|++..+++.||||++.... +.........+|+|||||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 130 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELV 130 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeC
Confidence 3567999999999999999999999999999999987542 112223677899999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec---CCcEEEeeccCCCccCCCCCCC
Q 002051 725 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 725 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~---~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
+|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||+++.....
T Consensus 131 ~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~---- 204 (349)
T 2w4o_A 131 TGGELFDRIVEK--GYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ---- 204 (349)
T ss_dssp CSCBHHHHHTTC--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC------------
T ss_pred CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc----
Confidence 999999999764 56999999999999999999999999999999999999975 889999999998653211
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHH-HH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK-TF 880 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~-~~ 880 (975)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+..... .+
T Consensus 205 ------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~ 260 (349)
T 2w4o_A 205 ------------------------VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMF 260 (349)
T ss_dssp --------------------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHH
T ss_pred ------------------------cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHH
Confidence 11234579999999999999999999999999999999999999998765544 56
Q ss_pred HHHHhcCCCCCC--CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCc
Q 002051 881 ANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936 (975)
Q Consensus 881 ~~i~~~~~~~p~--~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~ 936 (975)
..+......++. ...++..+.+||.+||+.||++||| +.++|+||||.+...
T Consensus 261 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e~l~hp~~~~~~~ 314 (349)
T 2w4o_A 261 RRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLT----TFQALQHPWVTGKAA 314 (349)
T ss_dssp HHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHHSTTTTSTTC
T ss_pred HHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcC----HHHHhcCcccCCCcc
Confidence 667666554433 3568899999999999999999999 999999999987644
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-39 Score=362.33 Aligned_cols=237 Identities=27% Similarity=0.447 Sum_probs=198.6
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------------ccccccCCeEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------------LNRNKTKTHVC 718 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------------~~~~~~~~~~~ 718 (975)
.++|++++.||+|+||.||+|.++.+|+.||||++..... +.......++|
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 4679999999999999999999999999999999864321 11122577899
Q ss_pred EEEeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc---EEEeeccCCCc
Q 002051 719 LITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH---VSLTDFDLSCL 793 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~---vkL~DFG~a~~ 793 (975)
||||||+|++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++.++. +||+|||++..
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~ 182 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ 182 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEE
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeE
Confidence 999999999999887642 2345899999999999999999999999999999999999986654 99999999965
Q ss_pred cCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCC
Q 002051 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 873 (975)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~ 873 (975)
..... ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus 183 ~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 235 (351)
T 3c0i_A 183 LGESG---------------------------LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG 235 (351)
T ss_dssp CCTTS---------------------------CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred ecCCC---------------------------eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCC
Confidence 43211 112345799999999999999999999999999999999999999987
Q ss_pred CCHHHHHHHHHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCc
Q 002051 874 KTRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936 (975)
Q Consensus 874 ~~~~~~~~~i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~ 936 (975)
. ....+..+......++.. ..++..+.+||.+||.+||.+||| +.++|+||||++.++
T Consensus 236 ~-~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s----~~e~l~hp~~~~~~~ 295 (351)
T 3c0i_A 236 T-KERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERIT----VYEALNHPWLKERDR 295 (351)
T ss_dssp S-HHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCC----HHHHHTSHHHHTHHH
T ss_pred c-HHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcC----HHHHhcChhhcCCcc
Confidence 5 456667777766554422 457899999999999999999999 999999999987654
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-38 Score=368.27 Aligned_cols=233 Identities=25% Similarity=0.421 Sum_probs=194.6
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------------ccccccCCeE
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------------LNRNKTKTHV 717 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------------~~~~~~~~~~ 717 (975)
...+|++++.||+|+||+||+|.+..+++.||||++..... ........++
T Consensus 95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 35689999999999999999999999999999999865320 1111246789
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc--EEEeeccCCCccC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH--VSLTDFDLSCLTS 795 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~--vkL~DFG~a~~~~ 795 (975)
|+||||| +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++. +||+|||+++...
T Consensus 175 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~ 253 (429)
T 3kvw_A 175 CMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH 253 (429)
T ss_dssp EEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred EEEEecc-CCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecC
Confidence 9999999 579999998876667999999999999999999999999999999999999999887 9999999985432
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
. .....+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+
T Consensus 254 ~------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 254 Q------------------------------RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp C------------------------------CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred C------------------------------cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 1 1234579999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHhcCCC--------------------CC-----------------------------C--------CCCCcH
Q 002051 876 RQKTFANILHKDLK--------------------FP-----------------------------S--------STPTSL 898 (975)
Q Consensus 876 ~~~~~~~i~~~~~~--------------------~p-----------------------------~--------~~~~s~ 898 (975)
..+.+..+...... +| . ....++
T Consensus 304 ~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 383 (429)
T 3kvw_A 304 EGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDP 383 (429)
T ss_dssp HHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCH
T ss_pred HHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchH
Confidence 88877766531000 00 0 012367
Q ss_pred HHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 899 HAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 899 ~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
.+.+||++||++||.+||| +.|+|+||||+..
T Consensus 384 ~~~dli~~~L~~dP~~Rpt----a~e~L~Hpw~~~~ 415 (429)
T 3kvw_A 384 LFLDFLKQCLEWDPAVRMT----PGQALRHPWLRRR 415 (429)
T ss_dssp HHHHHHHHHTCSSTTTSCC----HHHHHTSTTTC--
T ss_pred HHHHHHHHHCCCChhhCCC----HHHHhCChhhccC
Confidence 8999999999999999999 9999999999853
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=374.07 Aligned_cols=229 Identities=24% Similarity=0.439 Sum_probs=185.3
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------cccc------ccCC
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRN------KTKT 715 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~------~~~~ 715 (975)
.++|++++.||+|+||+||+|.+..+++.||||++.+... .... ....
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 5789999999999999999999999999999999864310 0000 1235
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
++|||||||. ++|.+.+.. .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+...
T Consensus 141 ~~~lv~E~~~-~~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 215 (464)
T 3ttj_A 141 DVYLVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215 (464)
T ss_dssp EEEEEEECCS-EEHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC----
T ss_pred eEEEEEeCCC-CCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecC
Confidence 7899999995 568777753 38999999999999999999999999999999999999999999999999996543
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
.. ......+||+.|+|||++.+..|+.++|||||||++|+|++|++||.+.+
T Consensus 216 ~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~ 267 (464)
T 3ttj_A 216 TS----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 267 (464)
T ss_dssp -C----------------------------CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CC----------------------------cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 11 12234689999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHhcCCCC-------------------CCCCC---------------------CcHHHHHHHHHhcccCcccc
Q 002051 876 RQKTFANILHKDLKF-------------------PSSTP---------------------TSLHAKQLMYRLLHRDPKSR 915 (975)
Q Consensus 876 ~~~~~~~i~~~~~~~-------------------p~~~~---------------------~s~~~~~li~~~L~~dP~~R 915 (975)
..+.+..++...... +.... .+.++++||.+||++||.+|
T Consensus 268 ~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R 347 (464)
T 3ttj_A 268 YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 347 (464)
T ss_dssp HHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTS
T ss_pred HHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhC
Confidence 888877775421100 00000 15678999999999999999
Q ss_pred CCChhhHHHHHcCCCccC
Q 002051 916 LGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 916 ~t~~~~~~elL~Hp~f~~ 933 (975)
|| ++|+|+||||+.
T Consensus 348 ~t----a~e~L~Hp~~~~ 361 (464)
T 3ttj_A 348 IS----VDDALQHPYINV 361 (464)
T ss_dssp CC----HHHHHTSTTTGG
T ss_pred CC----HHHHhcChhhhh
Confidence 99 999999999984
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-38 Score=346.99 Aligned_cols=233 Identities=23% Similarity=0.392 Sum_probs=188.6
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~lV~ 721 (975)
+++|++++.||+|+||+||+|++ .+|+.||+|++..... ........++|+||
T Consensus 1 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (288)
T 1ob3_A 1 MEKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF 79 (288)
T ss_dssp CCSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEE
T ss_pred CccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEE
Confidence 36899999999999999999999 7789999999864321 11122567899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
||+. ++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 153 (288)
T 1ob3_A 80 EHLD-QDLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP---- 153 (288)
T ss_dssp ECCS-EEHHHHHHTS-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred EecC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCcc----
Confidence 9996 5999998764 356999999999999999999999999999999999999999999999999998654311
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~ 880 (975)
........||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+.+
T Consensus 154 -----------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~ 210 (288)
T 1ob3_A 154 -----------------------VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQL 210 (288)
T ss_dssp -------------------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred -----------------------ccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 0112234789999999999764 5899999999999999999999999998887777
Q ss_pred HHHHhcCCC-----C-------------C---------CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 881 ANILHKDLK-----F-------------P---------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 881 ~~i~~~~~~-----~-------------p---------~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
..+...... + + ....++..+.+||.+||++||++||| ++|+|+||||++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e~l~hp~f~~ 286 (288)
T 1ob3_A 211 MRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRIT----AKQALEHAYFKE 286 (288)
T ss_dssp HHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCC----HHHHHTSGGGGC
T ss_pred HHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCC----HHHHhcCcchhh
Confidence 766541100 0 0 01246889999999999999999999 999999999987
Q ss_pred C
Q 002051 934 V 934 (975)
Q Consensus 934 ~ 934 (975)
.
T Consensus 287 ~ 287 (288)
T 1ob3_A 287 N 287 (288)
T ss_dssp -
T ss_pred c
Confidence 5
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=347.06 Aligned_cols=234 Identities=33% Similarity=0.564 Sum_probs=201.6
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHV 717 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~ 717 (975)
.+..++|++++.||+|+||.||+|.+..+++.||+|++.+... .....+...+
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 84 (279)
T 3fdn_A 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRV 84 (279)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred eeecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEE
Confidence 4567899999999999999999999999999999999854321 1122256789
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|+||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 85 ~lv~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~- 161 (279)
T 3fdn_A 85 YLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS- 161 (279)
T ss_dssp EEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCc-
Confidence 9999999999999999874 5599999999999999999999999999999999999999999999999998854321
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus 162 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 213 (279)
T 3fdn_A 162 ----------------------------SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 213 (279)
T ss_dssp ----------------------------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred ----------------------------ccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH
Confidence 1112357899999999999999999999999999999999999999999988
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCC
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~ 935 (975)
.....+......+|. .++..+.+||.+||+.||.+||| +.|+++||||++..
T Consensus 214 ~~~~~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~Rps----~~e~l~h~~~~~~~ 265 (279)
T 3fdn_A 214 ETYKRISRVEFTFPD--FVTEGARDLISRLLKHNPSQRPM----LREVLEHPWITANS 265 (279)
T ss_dssp HHHHHHHHTCCCCCT--TSCHHHHHHHHHHCCSSGGGSCC----HHHHHHCHHHHHHC
T ss_pred HHHHHHHhCCCCCCC--cCCHHHHHHHHHHhccChhhCCC----HHHHhhCccccCCc
Confidence 888888877666554 47889999999999999999999 99999999998643
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=372.50 Aligned_cols=234 Identities=28% Similarity=0.474 Sum_probs=203.8
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCe
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTH 716 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~ 716 (975)
..+..++|.+++.||+|+||.||+|++..+|+.||||++.+... .........
T Consensus 11 ~~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~ 90 (476)
T 2y94_A 11 GRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSD 90 (476)
T ss_dssp SCCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred CCceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence 34667899999999999999999999999999999999865421 111225678
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
+|+|||||+||+|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 91 ~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 91 IFMVMEYVSGGELFDYICKN--GRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp EEEEEECCSSEEHHHHTTSS--SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred EEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 99999999999999999764 5699999999999999999999999999999999999999999999999999865431
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCC-CChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
. ......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+
T Consensus 169 ~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~ 220 (476)
T 2y94_A 169 G----------------------------EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH 220 (476)
T ss_dssp T----------------------------CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred c----------------------------ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC
Confidence 1 11234589999999999998776 679999999999999999999999988
Q ss_pred HHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 876 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 876 ~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
....+.++..+.+..|. .+++.+.+||++||+.||.+||| +.++++||||+.
T Consensus 221 ~~~~~~~i~~~~~~~p~--~~s~~~~~Li~~~L~~dP~~Rpt----~~eil~hp~~~~ 272 (476)
T 2y94_A 221 VPTLFKKICDGIFYTPQ--YLNPSVISLLKHMLQVDPMKRAT----IKDIREHEWFKQ 272 (476)
T ss_dssp SHHHHHHHHTTCCCCCT--TCCHHHHHHHHHHTCSSTTTSCC----HHHHHTCHHHHT
T ss_pred HHHHHHHHhcCCcCCCc--cCCHHHHHHHHHHcCCCchhCcC----HHHHHhCHHhhh
Confidence 88888888887665543 47899999999999999999999 999999999975
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-38 Score=359.53 Aligned_cols=233 Identities=29% Similarity=0.451 Sum_probs=187.7
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccc------cCC
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNK------TKT 715 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~------~~~ 715 (975)
.++|++++.||+|+||.||+|.+..+|+.||||++..... ..... ...
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 4689999999999999999999999999999999854210 00001 124
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
.+|+||||+ +++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 179 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD 179 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred eEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence 579999999 8999999986 458999999999999999999999999999999999999999999999999986532
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 874 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~ 874 (975)
. .....+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.
T Consensus 180 ~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 229 (367)
T 1cm8_A 180 S------------------------------EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGS 229 (367)
T ss_dssp S------------------------------SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred c------------------------------ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCC
Confidence 1 1234578999999999987 67899999999999999999999999998
Q ss_pred CHHHHHHHHHhcCCCCC-----------------------------CCCCCcHHHHHHHHHhcccCccccCCChhhHHHH
Q 002051 875 TRQKTFANILHKDLKFP-----------------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 925 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~~p-----------------------------~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~el 925 (975)
+..+.+..+.......+ .....++.+.+||.+||++||.+||| +.++
T Consensus 230 ~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t----~~e~ 305 (367)
T 1cm8_A 230 DHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVT----AGEA 305 (367)
T ss_dssp SHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCC----HHHH
T ss_pred CHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCC----HHHH
Confidence 88887777654211110 11346889999999999999999999 9999
Q ss_pred HcCCCccCCCcch
Q 002051 926 KKHPFFKGVNWAL 938 (975)
Q Consensus 926 L~Hp~f~~~~~~~ 938 (975)
|+||||+++.+..
T Consensus 306 l~hp~f~~~~~~~ 318 (367)
T 1cm8_A 306 LAHPYFESLHDTE 318 (367)
T ss_dssp HHSGGGTTTC---
T ss_pred hcChHHHhhcCCc
Confidence 9999999876653
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-38 Score=351.44 Aligned_cols=244 Identities=28% Similarity=0.480 Sum_probs=189.9
Q ss_pred CCCcccc-cccccCCceEEEEEEEeCCCeEEEEEEeccch-------------------------hccccccCCeEEEEE
Q 002051 668 LQHFRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------------------MLNRNKTKTHVCLIT 721 (975)
Q Consensus 668 ~~~y~i~-~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------------------~~~~~~~~~~~~lV~ 721 (975)
.+.|++. +.||+|+||.||+|.+..+++.||||++.+.. +.....+..++|+||
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 3578885 78999999999999999999999999986531 011122567899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc---EEEeeccCCCccCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH---VSLTDFDLSCLTSCKP 798 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~---vkL~DFG~a~~~~~~~ 798 (975)
|||+|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++. +||+|||++.......
T Consensus 91 e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~ 168 (316)
T 2ac3_A 91 EKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNG 168 (316)
T ss_dssp ECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC------
T ss_pred EcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCC
Confidence 999999999999874 56999999999999999999999999999999999999998775 9999999986543211
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-----CCCCChhHHHHHHHHHHHHHhCCCCCCC
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFRG 873 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~~~k~DIWSLG~il~ell~G~~Pf~~ 873 (975)
... ..........+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+
T Consensus 169 ~~~--------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 228 (316)
T 2ac3_A 169 DCS--------------------PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG 228 (316)
T ss_dssp ---------------------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccc--------------------cccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcc
Confidence 000 000111234579999999999975 4578899999999999999999999987
Q ss_pred CC---------------HHHHHHHHHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCc
Q 002051 874 KT---------------RQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936 (975)
Q Consensus 874 ~~---------------~~~~~~~i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~ 936 (975)
.. ....+..+......++.. ..++..+.+||.+||+.||.+||| +.|+|+||||++..+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~e~l~hp~~~~~~~ 304 (316)
T 2ac3_A 229 RCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLS----AAQVLQHPWVQGCAP 304 (316)
T ss_dssp CCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC----HHHHHHSTTCC----
T ss_pred cccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCC----HHHHhcChhhcCCCC
Confidence 54 234556666666665542 457889999999999999999999 999999999998765
Q ss_pred c
Q 002051 937 A 937 (975)
Q Consensus 937 ~ 937 (975)
.
T Consensus 305 ~ 305 (316)
T 2ac3_A 305 E 305 (316)
T ss_dssp -
T ss_pred c
Confidence 4
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-38 Score=365.37 Aligned_cols=268 Identities=21% Similarity=0.321 Sum_probs=190.5
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------------------hcccccc-----CCe
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------------------MLNRNKT-----KTH 716 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------------~~~~~~~-----~~~ 716 (975)
.++|++++.||+|+||.||+|.++.+++.||||++.+.. +...... ...
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 568999999999999999999999999999999986521 0011111 267
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
+||||||| +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus 105 ~~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 181 (432)
T 3n9x_A 105 LYIVLEIA-DSDLKKLFKTP--IFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINS 181 (432)
T ss_dssp EEEEEECC-SEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred EEEEEecC-CcCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence 99999999 56999999764 5699999999999999999999999999999999999999999999999999976543
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhh-cCCCCCChhHHHHHHHHHHHHHh---------
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII-AGAGHTSAVDWWALGILLYEMLY--------- 866 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l-~~~~~~~k~DIWSLG~il~ell~--------- 866 (975)
............. .................+||+.|+|||++ .+..|+.++|||||||++|+|++
T Consensus 182 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~ 256 (432)
T 3n9x_A 182 EKDTNIVNDLEEN-----EEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDP 256 (432)
T ss_dssp ----------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSG
T ss_pred ccccccccccccc-----ccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccccc
Confidence 2111000000000 00000000001123567899999999986 55669999999999999999998
Q ss_pred --CCCCCCCCC-----------------HHHHHHHHHh------------------------cCCCCCC-----CCCCcH
Q 002051 867 --GYTPFRGKT-----------------RQKTFANILH------------------------KDLKFPS-----STPTSL 898 (975)
Q Consensus 867 --G~~Pf~~~~-----------------~~~~~~~i~~------------------------~~~~~p~-----~~~~s~ 898 (975)
|.++|.+.+ ....+..+.. .....+. ...+++
T Consensus 257 ~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 336 (432)
T 3n9x_A 257 TNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISD 336 (432)
T ss_dssp GGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCH
T ss_pred ccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCH
Confidence 455555543 1222222221 0111111 134789
Q ss_pred HHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhccCCCCC
Q 002051 899 HAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPEL 947 (975)
Q Consensus 899 ~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~~~~~~~ 947 (975)
.+.+||.+||++||.+||| ++|+|+||||++++|..........+
T Consensus 337 ~~~dLl~~mL~~dP~~R~t----a~e~L~Hp~f~~~~~~~~e~~~~~~~ 381 (432)
T 3n9x_A 337 DGINLLESMLKFNPNKRIT----IDQALDHPYLKDVRKKKLENFSTKKI 381 (432)
T ss_dssp HHHHHHHHHSCSSTTTSCC----HHHHHTCGGGTTTCCTTTC---CCCC
T ss_pred HHHHHHHHHhcCCcccCCC----HHHHhcChhhhhccCcccCcCCCCCC
Confidence 9999999999999999999 99999999999999987755444433
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-38 Score=349.98 Aligned_cols=239 Identities=27% Similarity=0.425 Sum_probs=191.1
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------------------hccccccCCeEEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------------------MLNRNKTKTHVCLIT 721 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------------~~~~~~~~~~~~lV~ 721 (975)
.++|++++.||+|+||+||+|.+..+|+.||||++.... +.........+|+||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 468999999999999999999999999999999875431 112222567899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
|||++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 82 e~~~~~~l~~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 156 (311)
T 4agu_A 82 EYCDHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS--- 156 (311)
T ss_dssp ECCSEEHHHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred EeCCCchHHHHHhhh--cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc---
Confidence 999999999988764 569999999999999999999999999999999999999999999999999986543110
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~ 880 (975)
......+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+..
T Consensus 157 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~ 212 (311)
T 4agu_A 157 ------------------------DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQL 212 (311)
T ss_dssp ---------------------------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred ------------------------cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 11234578999999999986 66899999999999999999999999998877766
Q ss_pred HHHHhc-------------------CCCCCCC----------CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 881 ANILHK-------------------DLKFPSS----------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 881 ~~i~~~-------------------~~~~p~~----------~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
..+... ....+.. ..++..+.+||.+||++||.+||| ++|+|+||||
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~hp~f 288 (311)
T 4agu_A 213 YLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLT----CEQLLHHPYF 288 (311)
T ss_dssp HHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCC----HHHHHTSGGG
T ss_pred HHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCC----HHHHhcChHH
Confidence 555431 1111111 346888999999999999999999 9999999999
Q ss_pred cCCCcchh
Q 002051 932 KGVNWALV 939 (975)
Q Consensus 932 ~~~~~~~~ 939 (975)
+++.+...
T Consensus 289 ~~~~~~~~ 296 (311)
T 4agu_A 289 ENIREIED 296 (311)
T ss_dssp TTCC----
T ss_pred HhccCHHH
Confidence 99877643
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=355.58 Aligned_cols=227 Identities=29% Similarity=0.485 Sum_probs=174.3
Q ss_pred cccccCCceEEEEEEEeCCCeEEEEEEeccch----------------------hccccccCCeEEEEEeccCCCCHHHH
Q 002051 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV----------------------MLNRNKTKTHVCLITDYCPGGELFLL 732 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~----------------------~~~~~~~~~~~~lV~Ey~~ggsL~~~ 732 (975)
+.||+|+||.||+|.++.+++.||||++.+.. +.....+..++|||||||+||+|.++
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 96 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFER 96 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHH
Confidence 78999999999999999999999999987642 11222367889999999999999999
Q ss_pred HhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC---cEEEeeccCCCccCCCCCCCCCcchhhh
Q 002051 733 LDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSCLTSCKPQLLLPTTNEKK 809 (975)
Q Consensus 733 l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g---~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 809 (975)
+... ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++.....
T Consensus 97 l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~------------ 162 (325)
T 3kn6_A 97 IKKK--KHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD------------ 162 (325)
T ss_dssp HHHC--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------------
T ss_pred HHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCC------------
Confidence 9875 5699999999999999999999999999999999999998766 8999999998653311
Q ss_pred hccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHH
Q 002051 810 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT-------RQKTFAN 882 (975)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~-------~~~~~~~ 882 (975)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+ ..+.+..
T Consensus 163 ---------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~ 227 (325)
T 3kn6_A 163 ---------------NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKK 227 (325)
T ss_dssp ------------------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHH
T ss_pred ---------------CCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHH
Confidence 111234578999999999999999999999999999999999999997643 3456666
Q ss_pred HHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 883 ILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 883 i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
+..+.+.++.. ..++.++++||.+||++||.+||| +.++++||||++.
T Consensus 228 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt----~~ell~h~w~~~~ 277 (325)
T 3kn6_A 228 IKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLK----MSGLRYNEWLQDG 277 (325)
T ss_dssp HTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCC----TTTSTTCGGGCTT
T ss_pred HHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCC----HHHHhcChhhccC
Confidence 76666555433 357899999999999999999999 9999999999864
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-38 Score=360.65 Aligned_cols=234 Identities=26% Similarity=0.388 Sum_probs=192.0
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------------ccccccCCeEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------------LNRNKTKTHVC 718 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------------~~~~~~~~~~~ 718 (975)
.++|++++.||+|+||+||+|.+..+++.||||+++.... ........++|
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 132 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLC 132 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEE
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceE
Confidence 5789999999999999999999999999999999864310 01112467899
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH--HCCCeecCCCCCCEEEe--cCCcEEEeeccCCCcc
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH--CQGIIYRDLKPENVLLQ--GNGHVSLTDFDLSCLT 794 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH--~~gIiHrDIKp~NILl~--~~g~vkL~DFG~a~~~ 794 (975)
|||||| +++|.+++.......+++..++.++.||+.||.||| +.||+||||||+|||++ .++.+||+|||+++..
T Consensus 133 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~ 211 (382)
T 2vx3_A 133 LVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL 211 (382)
T ss_dssp EEEECC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred EEEecC-CCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceec
Confidence 999999 569999998865567999999999999999999999 47999999999999995 4778999999999654
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCC
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 874 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~ 874 (975)
.. .....+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.
T Consensus 212 ~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 212 GQ------------------------------RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp TC------------------------------CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cc------------------------------ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 31 122457899999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCCCC-------------------------------------CCCC----------------------
Q 002051 875 TRQKTFANILHKDLKFP-------------------------------------SSTP---------------------- 895 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~~p-------------------------------------~~~~---------------------- 895 (975)
+..+.+..+.......+ ....
T Consensus 262 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 341 (382)
T 2vx3_A 262 NEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGH 341 (382)
T ss_dssp SHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTC
T ss_pred CHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccc
Confidence 88888777664211100 0000
Q ss_pred ---CcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCc
Q 002051 896 ---TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936 (975)
Q Consensus 896 ---~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~ 936 (975)
.+..+++||.+||++||++||| ++|+|+||||+...+
T Consensus 342 ~~~~~~~~~dli~~mL~~dP~~Rpt----a~e~L~hp~f~~~~~ 381 (382)
T 2vx3_A 342 TVADYLKFKDLILRMLDYDPKTRIQ----PYYALQHSFFKKTAD 381 (382)
T ss_dssp CHHHHHHHHHHHHHHTCSCTTTSCC----HHHHTTSGGGCC---
T ss_pred cchhhHHHHHHHHHhcCCChhhCCC----HHHHhcCcccccCCC
Confidence 0137899999999999999999 999999999987543
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-38 Score=360.50 Aligned_cols=234 Identities=26% Similarity=0.434 Sum_probs=195.4
Q ss_pred ccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEEeccCCC
Q 002051 672 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITDYCPGG 727 (975)
Q Consensus 672 ~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~Ey~~gg 727 (975)
...+.||+|+||.||+|.+..+|+.||+|+++... +.........+|||||||+|+
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~ 171 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG 171 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 33678999999999999999999999999987532 112223677899999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE--ecCCcEEEeeccCCCccCCCCCCCCCcc
Q 002051 728 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL--QGNGHVSLTDFDLSCLTSCKPQLLLPTT 805 (975)
Q Consensus 728 sL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl--~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 805 (975)
+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.....
T Consensus 172 ~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~-------- 242 (373)
T 2x4f_A 172 ELFDRIIDE-SYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR-------- 242 (373)
T ss_dssp EEHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTT--------
T ss_pred cHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCc--------
Confidence 999998764 2468999999999999999999999999999999999999 45678999999999654311
Q ss_pred hhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q 002051 806 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH 885 (975)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~ 885 (975)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+..
T Consensus 243 --------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~ 302 (373)
T 2x4f_A 243 --------------------EKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILA 302 (373)
T ss_dssp --------------------CBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH
T ss_pred --------------------cccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence 112235799999999999999899999999999999999999999999999999999888
Q ss_pred cCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcch
Q 002051 886 KDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWAL 938 (975)
Q Consensus 886 ~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~ 938 (975)
....++.. ..++..+.+||.+||++||.+||| +.|+|+||||++.++..
T Consensus 303 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps----~~e~l~hp~~~~~~~~~ 353 (373)
T 2x4f_A 303 CRWDLEDEEFQDISEEAKEFISKLLIKEKSWRIS----ASEALKHPWLSDHKLHS 353 (373)
T ss_dssp TCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHHSHHHHCHHHHH
T ss_pred ccCCCChhhhccCCHHHHHHHHHHcCCChhhCCC----HHHHhcCcCcCCCchhh
Confidence 76655432 467899999999999999999999 99999999999887753
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-38 Score=350.59 Aligned_cols=228 Identities=25% Similarity=0.363 Sum_probs=186.7
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch---------------------------hccccccCCeEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV---------------------------MLNRNKTKTHVCLI 720 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~---------------------------~~~~~~~~~~~~lV 720 (975)
.++|+++++||+|+||+||+|++..+|+.||||++.... +........++|+|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 357999999999999999999999999999999875421 11222367789999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 800 (975)
|||| +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 136 ~e~~-~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~--- 210 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA--- 210 (311)
T ss_dssp EECC-CCBHHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC-----
T ss_pred Eecc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccC---
Confidence 9999 77999988764 346999999999999999999999999999999999999999999999999998654311
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~ 880 (975)
.......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.. ..
T Consensus 211 -------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~---~~ 261 (311)
T 3p1a_A 211 -------------------------GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE---GW 261 (311)
T ss_dssp -----------------------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH---HH
T ss_pred -------------------------CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc---HH
Confidence 11234569999999999987 68999999999999999999977775532 23
Q ss_pred HHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 881 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 881 ~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
..+............++..+.+||.+||++||++||| +.|+|+||||+.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt----~~ell~hp~~~~ 310 (311)
T 3p1a_A 262 QQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRAT----AEALLALPVLRQ 310 (311)
T ss_dssp HHHTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC----HHHHHTSGGGSC
T ss_pred HHHhccCCCcccccCCCHHHHHHHHHHcCCChhhCcC----HHHHHhCccccC
Confidence 3343333322223457899999999999999999999 999999999975
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=346.82 Aligned_cols=232 Identities=30% Similarity=0.489 Sum_probs=197.3
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEEeccC
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITDYCP 725 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~Ey~~ 725 (975)
.|...+.||+|+||.||+|++..+|+.||||++.... +.........+|+||||++
T Consensus 46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 125 (321)
T 2c30_A 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQ 125 (321)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCC
Confidence 4778889999999999999999999999999986432 1111225678999999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcc
Q 002051 726 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 805 (975)
Q Consensus 726 ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 805 (975)
|++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 126 ~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~-------- 194 (321)
T 2c30_A 126 GGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD-------- 194 (321)
T ss_dssp SCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSS--------
T ss_pred CCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccC--------
Confidence 9999999865 46999999999999999999999999999999999999999999999999998654311
Q ss_pred hhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q 002051 806 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH 885 (975)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~ 885 (975)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+..
T Consensus 195 -------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~ 255 (321)
T 2c30_A 195 -------------------VPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD 255 (321)
T ss_dssp -------------------SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred -------------------ccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence 0112345799999999999999999999999999999999999999999888887777766
Q ss_pred cCCC-CCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCC
Q 002051 886 KDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935 (975)
Q Consensus 886 ~~~~-~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~ 935 (975)
.... +.....++..+.+||.+||+.||.+||| +.++++||||....
T Consensus 256 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~hp~~~~~~ 302 (321)
T 2c30_A 256 SPPPKLKNSHKVSPVLRDFLERMLVRDPQERAT----AQELLDHPFLLQTG 302 (321)
T ss_dssp SSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCC----HHHHHTSGGGGGCC
T ss_pred CCCCCcCccccCCHHHHHHHHHHccCChhhCcC----HHHHhcChhhccCC
Confidence 5432 2333457889999999999999999999 99999999997543
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-38 Score=342.97 Aligned_cols=233 Identities=31% Similarity=0.555 Sum_probs=202.8
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHV 717 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~ 717 (975)
.+..++|++.+.||+|+||.||+|.+..+++.||+|++.+... .........+
T Consensus 10 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 89 (284)
T 2vgo_A 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRI 89 (284)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred chhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEE
Confidence 4567899999999999999999999999999999999864321 1112256789
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|+||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 90 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~- 166 (284)
T 2vgo_A 90 YLMLEFAPRGELYKELQKH--GRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS- 166 (284)
T ss_dssp EEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSS-
T ss_pred EEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCcc-
Confidence 9999999999999999874 4699999999999999999999999999999999999999999999999998854321
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
.......|++.|+|||++.+..++.++|||||||++|+|++|..||...+..
T Consensus 167 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 218 (284)
T 2vgo_A 167 ----------------------------LRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT 218 (284)
T ss_dssp ----------------------------SCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred ----------------------------cccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh
Confidence 1123457899999999999999999999999999999999999999998888
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
.....+......+|. .++..+.+||.+||..||.+||| +.++++||||+..
T Consensus 219 ~~~~~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~Rps----~~~ll~h~~~~~~ 269 (284)
T 2vgo_A 219 ETHRRIVNVDLKFPP--FLSDGSKDLISKLLRYHPPQRLP----LKGVMEHPWVKAN 269 (284)
T ss_dssp HHHHHHHTTCCCCCT--TSCHHHHHHHHHHSCSSGGGSCC----HHHHHTCHHHHHH
T ss_pred HHHHHHhccccCCCC--cCCHHHHHHHHHHhhcCHhhCCC----HHHHhhCHHHHhh
Confidence 888888877665553 47899999999999999999999 9999999999743
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-38 Score=351.30 Aligned_cols=238 Identities=26% Similarity=0.421 Sum_probs=192.9
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc--------------------------------cccccCC
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--------------------------------NRNKTKT 715 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~--------------------------------~~~~~~~ 715 (975)
.++|++++.||+|+||.||+|.++.+++.||||++.+.... ....+..
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 35799999999999999999999999999999998764311 1122677
Q ss_pred eEEEEEeccCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCcc
Q 002051 716 HVCLITDYCPGG-ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 794 (975)
Q Consensus 716 ~~~lV~Ey~~gg-sL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~ 794 (975)
++|+||||+.+| +|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 180 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDRH--PRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL 180 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHTC--CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceEC
Confidence 899999999766 999999874 46999999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCC-CChhHHHHHHHHHHHHHhCCCCCCC
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRG 873 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-~~k~DIWSLG~il~ell~G~~Pf~~ 873 (975)
... ......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||..
T Consensus 181 ~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 232 (335)
T 3dls_A 181 ERG----------------------------KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE 232 (335)
T ss_dssp CTT----------------------------CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred CCC----------------------------CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhh
Confidence 311 11234579999999999998877 7799999999999999999999976
Q ss_pred CCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC------CCcchhhccCCCCC
Q 002051 874 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG------VNWALVRCMNPPEL 947 (975)
Q Consensus 874 ~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~------~~~~~~~~~~~~~~ 947 (975)
... ..... ...+..++..+.+||.+||++||.+||| +.++++||||+. .+|..+.....|..
T Consensus 233 ~~~------~~~~~--~~~~~~~~~~l~~li~~~L~~dP~~Rps----~~ell~hp~~~~~~~~~~~~~~~~~~~~~~~~ 300 (335)
T 3dls_A 233 LEE------TVEAA--IHPPYLVSKELMSLVSGLLQPVPERRTT----LEKLVTDPWVTQPVNLADYTWEEVFRVNKPES 300 (335)
T ss_dssp GGG------GTTTC--CCCSSCCCHHHHHHHHHHTCSSGGGSCC----HHHHHHCTTTTCCCCGGGCCHHHHC-------
T ss_pred HHH------HHhhc--cCCCcccCHHHHHHHHHHccCChhhCcC----HHHHhcCccccCCccccccCHHHHhhhcCCCC
Confidence 321 12222 2223347899999999999999999999 999999999965 56766666555544
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-38 Score=350.22 Aligned_cols=235 Identities=25% Similarity=0.415 Sum_probs=194.0
Q ss_pred ccCCCcccccccccCCceEEEEEEE-eCCCeEEEEEEeccch-----------------------------hccccccCC
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVEL-CGSGQYFAMKAMDKGV-----------------------------MLNRNKTKT 715 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~-~~t~~~vAiK~l~~~~-----------------------------~~~~~~~~~ 715 (975)
+..++|++++.||+|+||.||+|.+ ..+++.||||+++... +........
T Consensus 11 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~ 90 (339)
T 1z57_A 11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG 90 (339)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred CccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence 3457899999999999999999999 5689999999986421 011122567
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec----------------
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---------------- 779 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~---------------- 779 (975)
++|+||||| +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 91 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~ 169 (339)
T 1z57_A 91 HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDER 169 (339)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEE
T ss_pred cEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccc
Confidence 899999999 899999998876567999999999999999999999999999999999999987
Q ss_pred ---CCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHH
Q 002051 780 ---NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWA 856 (975)
Q Consensus 780 ---~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWS 856 (975)
++.+||+|||++..... .....+||+.|+|||++.+..++.++||||
T Consensus 170 ~~~~~~~kl~Dfg~~~~~~~------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s 219 (339)
T 1z57_A 170 TLINPDIKVVDFGSATYDDE------------------------------HHSTLVSTRHYRAPEVILALGWSQPCDVWS 219 (339)
T ss_dssp EESCCCEEECCCSSCEETTS------------------------------CCCSSCSCGGGCCHHHHTTSCCCTHHHHHH
T ss_pred cccCCCceEeeCcccccCcc------------------------------ccccccCCccccChHHhhCCCCCcchhhHH
Confidence 66799999999854321 123457899999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC------------------------------------------CCC
Q 002051 857 LGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFP------------------------------------------SST 894 (975)
Q Consensus 857 LG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p------------------------------------------~~~ 894 (975)
|||++|+|++|..||.+.+..+....+......+| ...
T Consensus 220 lG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (339)
T 1z57_A 220 IGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQD 299 (339)
T ss_dssp HHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCS
T ss_pred HHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccch
Confidence 99999999999999998887766554433211111 011
Q ss_pred CCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCC
Q 002051 895 PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935 (975)
Q Consensus 895 ~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~ 935 (975)
..+..+.+||.+||++||.+||| +.|+|+||||+.+.
T Consensus 300 ~~~~~l~~li~~~L~~dP~~Rpt----~~ell~hp~f~~~~ 336 (339)
T 1z57_A 300 VEHERLFDLIQKMLEYDPAKRIT----LREALKHPFFDLLK 336 (339)
T ss_dssp HHHHHHHHHHHHHTCSSTTTSCC----HHHHTTSGGGGGGG
T ss_pred hhHHHHHHHHHHHhCcCcccccC----HHHHhcCHHHHHHh
Confidence 23567889999999999999999 99999999998754
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=360.34 Aligned_cols=239 Identities=30% Similarity=0.469 Sum_probs=192.3
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc--------------------ccc------ccCCeEEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--------------------NRN------KTKTHVCLIT 721 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~--------------------~~~------~~~~~~~lV~ 721 (975)
..+|++++.||+|+||.||+|+++.+|+.||||++...... ... .+..++++||
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~ 132 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 132 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeeh
Confidence 34699999999999999999999999999999988643210 000 1233578999
Q ss_pred eccCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC-CcEEEeeccCCCccCCCC
Q 002051 722 DYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 722 Ey~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~-g~vkL~DFG~a~~~~~~~ 798 (975)
||++ ++|.+++.. .....+++..++.++.||+.||.|||++||+||||||+|||++.+ +.+||+|||+++.....
T Consensus 133 e~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~- 210 (420)
T 1j1b_A 133 DYVP-ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG- 210 (420)
T ss_dssp ECCC-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTT-
T ss_pred hccc-ccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhcccC-
Confidence 9995 477776653 224579999999999999999999999999999999999999965 57899999999654311
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
......+||+.|+|||++.+. .|+.++|||||||++|+|++|++||.+.+..
T Consensus 211 ---------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~ 263 (420)
T 1j1b_A 211 ---------------------------EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 263 (420)
T ss_dssp ---------------------------CCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ---------------------------CCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH
Confidence 112345789999999999775 7899999999999999999999999998887
Q ss_pred HHHHHHHhc-----------------CCCCCC----------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCC
Q 002051 878 KTFANILHK-----------------DLKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930 (975)
Q Consensus 878 ~~~~~i~~~-----------------~~~~p~----------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~ 930 (975)
+.+..++.. .+.+|. ....+.++.+||.+||.+||.+||| +.|+|+|||
T Consensus 264 ~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t----~~e~l~hp~ 339 (420)
T 1j1b_A 264 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT----PLEACAHSF 339 (420)
T ss_dssp HHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCC----HHHHHTSGG
T ss_pred HHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCC----HHHHhCCHh
Confidence 777766541 122221 1245789999999999999999999 999999999
Q ss_pred ccCCCcchh
Q 002051 931 FKGVNWALV 939 (975)
Q Consensus 931 f~~~~~~~~ 939 (975)
|+++.+...
T Consensus 340 f~~~~~~~~ 348 (420)
T 1j1b_A 340 FDELRDPNV 348 (420)
T ss_dssp GGGGGCTTC
T ss_pred hcccccccc
Confidence 988766543
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-37 Score=340.82 Aligned_cols=240 Identities=31% Similarity=0.468 Sum_probs=202.6
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch----------------------------------hcccccc
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV----------------------------------MLNRNKT 713 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~----------------------------------~~~~~~~ 713 (975)
.++|++.+.||+|+||.||+|.++.+|+.||||++.... +......
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 578999999999999999999999999999999985321 0111225
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 714 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 714 ~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
..++|+||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 173 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ 173 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred CCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhh
Confidence 67899999999999999999874 5699999999999999999999999999999999999999999999999999865
Q ss_pred cCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhc------CCCCCChhHHHHHHHHHHHHHhC
Q 002051 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA------GAGHTSAVDWWALGILLYEMLYG 867 (975)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~------~~~~~~k~DIWSLG~il~ell~G 867 (975)
.... .......|++.|+|||++. ...++.++|||||||++|+|++|
T Consensus 174 ~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g 225 (298)
T 1phk_A 174 LDPG----------------------------EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225 (298)
T ss_dssp CCTT----------------------------CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHS
T ss_pred cCCC----------------------------cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHC
Confidence 4311 1123457899999999985 45678899999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhc
Q 002051 868 YTPFRGKTRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRC 941 (975)
Q Consensus 868 ~~Pf~~~~~~~~~~~i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~ 941 (975)
..||.+.+.......+......++.. ..++..+.+||.+||+.||.+||| +.++|+||||++..+..++.
T Consensus 226 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~h~~~~~~~~~~~~~ 297 (298)
T 1phk_A 226 SPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYT----AEEALAHPFFQQYVVEEVRH 297 (298)
T ss_dssp SCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCC----HHHHTTSGGGCTTC------
T ss_pred CCCCcCccHHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCC----HHHHHhChHhhhccchhhcc
Confidence 99999988888888888876665543 457899999999999999999999 99999999999998876653
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=347.78 Aligned_cols=242 Identities=27% Similarity=0.385 Sum_probs=198.3
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-----------hc-------------ccccc------CC
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-----------ML-------------NRNKT------KT 715 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-----------~~-------------~~~~~------~~ 715 (975)
...++|++++.||+|+||.||+|++..+++.||||++.... ++ ..... ..
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~ 100 (326)
T 2x7f_A 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 100 (326)
T ss_dssp CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCC
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccc
Confidence 45678999999999999999999999999999999986431 00 00001 56
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
.+|+|||||++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 180 (326)
T 2x7f_A 101 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 180 (326)
T ss_dssp EEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC---
T ss_pred eEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCceecC
Confidence 89999999999999999987655679999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhc-----CCCCCChhHHHHHHHHHHHHHhCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTP 870 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~~~k~DIWSLG~il~ell~G~~P 870 (975)
.. ........||+.|+|||++. +..++.++|||||||++|+|++|..|
T Consensus 181 ~~---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p 233 (326)
T 2x7f_A 181 RT---------------------------VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233 (326)
T ss_dssp -------------------------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCT
T ss_pred cC---------------------------ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCC
Confidence 11 01123457899999999997 56688999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcch
Q 002051 871 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWAL 938 (975)
Q Consensus 871 f~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~ 938 (975)
|.+.+....+..+............++..+.+||.+||..||.+||| +.++++||||+...+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~hp~~~~~~~~~ 297 (326)
T 2x7f_A 234 LCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPA----TEQLMKHPFIRDQPNER 297 (326)
T ss_dssp TTTSCHHHHHHHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCC----HHHHHTSHHHHCCTTHH
T ss_pred CCCCcHHHHHHHhhcCccccCCccccCHHHHHHHHHHhccChhhCCC----HHHHhhChHHhhCcccc
Confidence 99888877777776655444444567899999999999999999999 99999999999877654
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=352.09 Aligned_cols=238 Identities=25% Similarity=0.389 Sum_probs=196.0
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCC-eEEEEEEeccchh-----------------------------ccccccCCe
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSG-QYFAMKAMDKGVM-----------------------------LNRNKTKTH 716 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~-~~vAiK~l~~~~~-----------------------------~~~~~~~~~ 716 (975)
..++|++++.||+|+||.||+|.+..++ +.||+|+++.... ........+
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 3578999999999999999999998776 7999999864210 011124678
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE-------------------
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL------------------- 777 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl------------------- 777 (975)
+||||||| +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~ 175 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccc
Confidence 99999999 7788888877655679999999999999999999999999999999999999
Q ss_pred ecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHH
Q 002051 778 QGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWAL 857 (975)
Q Consensus 778 ~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSL 857 (975)
+.++.+||+|||++..... .....+||+.|+|||++.+..++.++|||||
T Consensus 176 ~~~~~~kl~Dfg~~~~~~~------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl 225 (355)
T 2eu9_A 176 VKNTSIRVADFGSATFDHE------------------------------HHTTIVATRHYRPPEVILELGWAQPCDVWSI 225 (355)
T ss_dssp ESCCCEEECCCTTCEETTS------------------------------CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHH
T ss_pred cCCCcEEEeecCccccccc------------------------------cccCCcCCCcccCCeeeecCCCCCccchHHH
Confidence 6678999999999854221 1234579999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCC------------------------------------------CCC
Q 002051 858 GILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPS------------------------------------------STP 895 (975)
Q Consensus 858 G~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~------------------------------------------~~~ 895 (975)
||++|+|++|..||.+.+....+..+......+|. ...
T Consensus 226 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (355)
T 2eu9_A 226 GCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSL 305 (355)
T ss_dssp HHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSH
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccch
Confidence 99999999999999988877665554332111110 111
Q ss_pred CcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchh
Q 002051 896 TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 939 (975)
Q Consensus 896 ~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~ 939 (975)
.+..+.+||.+||++||.+||| +.|+|+||||+++++...
T Consensus 306 ~~~~l~~li~~~L~~dP~~Rpt----~~e~l~hp~f~~~~~~~~ 345 (355)
T 2eu9_A 306 EHVQLFDLMRRMLEFDPAQRIT----LAEALLHPFFAGLTPEER 345 (355)
T ss_dssp HHHHHHHHHHHHTCSSTTTSCC----HHHHTTSGGGGGCCHHHH
T ss_pred hHHHHHHHHHHHhcCChhhCcC----HHHHhcChhhcCCChhhc
Confidence 2457889999999999999999 999999999999988644
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-38 Score=370.98 Aligned_cols=233 Identities=30% Similarity=0.486 Sum_probs=197.5
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEEEEEe
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCLITD 722 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~lV~E 722 (975)
++|+++++||+|+||+||+|+++.++..||+|++.+... +....+..++|+|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 469999999999999999999999999999999875421 122236778999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC---CcEEEeeccCCCccCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~---g~vkL~DFG~a~~~~~~~~ 799 (975)
||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.. +.+||+|||++......
T Consensus 117 ~~~~g~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~-- 192 (494)
T 3lij_A 117 CYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ-- 192 (494)
T ss_dssp CCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT--
T ss_pred cCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC--
Confidence 99999999998764 569999999999999999999999999999999999999764 45999999998654311
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
......+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+..+.
T Consensus 193 --------------------------~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~ 245 (494)
T 3lij_A 193 --------------------------KKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEI 245 (494)
T ss_dssp --------------------------BCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred --------------------------ccccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 12234579999999999874 589999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCc
Q 002051 880 FANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936 (975)
Q Consensus 880 ~~~i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~ 936 (975)
+..+..+.+.++.. ..++..+++||++||++||.+||| +.++|+||||+....
T Consensus 246 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s----~~e~l~hp~~~~~~~ 300 (494)
T 3lij_A 246 LRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRIS----AQQALEHPWIKEMCS 300 (494)
T ss_dssp HHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCC----HHHHHTCHHHHHHHH
T ss_pred HHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCcc----HHHHhcCcccccCcc
Confidence 99998887766543 568999999999999999999999 999999999986533
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=355.78 Aligned_cols=243 Identities=24% Similarity=0.411 Sum_probs=188.1
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccc------cCC
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNK------TKT 715 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~------~~~ 715 (975)
.++|++++.||+|+||.||+|.+..+++.||||++..... ..... ...
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 5789999999999999999999999999999999865210 00001 124
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
++|+|||||. ++|.+++.. .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 104 ~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 178 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178 (371)
T ss_dssp EEEEEEECCS-EEHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred ceEEEEEcCC-CCHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence 7899999995 589888863 48999999999999999999999999999999999999999999999999986533
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
.. ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+
T Consensus 179 ~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 230 (371)
T 2xrw_A 179 TS----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 230 (371)
T ss_dssp ---------------------------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cc----------------------------cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 11 11224578999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHhcCCCC-------------------CCCC---------------------CCcHHHHHHHHHhcccCcccc
Q 002051 876 RQKTFANILHKDLKF-------------------PSST---------------------PTSLHAKQLMYRLLHRDPKSR 915 (975)
Q Consensus 876 ~~~~~~~i~~~~~~~-------------------p~~~---------------------~~s~~~~~li~~~L~~dP~~R 915 (975)
....+..+....... +... ..+..+++||++||++||.+|
T Consensus 231 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R 310 (371)
T 2xrw_A 231 HIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 310 (371)
T ss_dssp HHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGS
T ss_pred HHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhC
Confidence 888777776532110 0000 015678999999999999999
Q ss_pred CCChhhHHHHHcCCCccCCCcchhhccCCCCC
Q 002051 916 LGSHEGANEIKKHPFFKGVNWALVRCMNPPEL 947 (975)
Q Consensus 916 ~t~~~~~~elL~Hp~f~~~~~~~~~~~~~~~~ 947 (975)
|| ++|+|+||||+...........+|.+
T Consensus 311 ~t----~~e~l~hp~~~~~~~~~~~~~~~~~~ 338 (371)
T 2xrw_A 311 IS----VDEALQHPYINVWYDPSEAEAPPPKI 338 (371)
T ss_dssp CC----HHHHHHSHHHHTTCCHHHHTCCCCCC
T ss_pred CC----HHHHhCCcchhhhcCccccCCCCCCC
Confidence 99 99999999998654444333444433
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-38 Score=343.34 Aligned_cols=236 Identities=26% Similarity=0.383 Sum_probs=186.0
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------------------hccccccCCeEE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------------------MLNRNKTKTHVC 718 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------------~~~~~~~~~~~~ 718 (975)
.+..++|++++.||+|+||.||+|++..+|+.||+|++.... +........++|
T Consensus 3 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~ 82 (290)
T 3fme_A 3 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVW 82 (290)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEE
T ss_pred cccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEE
Confidence 456789999999999999999999999999999999986531 111122567899
Q ss_pred EEEeccCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 719 LITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qIl~aL~yLH~~-gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
+|||||+ |+|.+++.. .....+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++....
T Consensus 83 lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 83 ICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp EEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred EEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 9999995 588887754 1245799999999999999999999998 99999999999999999999999999986543
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhh----cCCCCCChhHHHHHHHHHHHHHhCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII----AGAGHTSAVDWWALGILLYEMLYGYTPF 871 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l----~~~~~~~k~DIWSLG~il~ell~G~~Pf 871 (975)
.. .......||+.|+|||++ .+..++.++|||||||++|+|++|..||
T Consensus 162 ~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~ 213 (290)
T 3fme_A 162 DD----------------------------VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPY 213 (290)
T ss_dssp ------------------------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSS
T ss_pred cc----------------------------ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCc
Confidence 11 111234689999999996 5567888999999999999999999999
Q ss_pred CC-CCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 872 RG-KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 872 ~~-~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
.. ......+...............++..+.+||.+||+.||.+||| +.|+++||||+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~e~l~hp~f~~ 272 (290)
T 3fme_A 214 DSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPT----YPELMQHPFFTL 272 (290)
T ss_dssp CCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCC----HHHHTTSHHHHH
T ss_pred cccCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcC----HHHHHhCccccc
Confidence 86 44555555555554444444568899999999999999999999 999999999974
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-37 Score=341.86 Aligned_cols=267 Identities=25% Similarity=0.389 Sum_probs=206.1
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc----------------------------ccc--ccCCeE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML----------------------------NRN--KTKTHV 717 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~----------------------------~~~--~~~~~~ 717 (975)
.++|++++.||+|+||.||+|.+..+++.||+|++.+.... ... ....++
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 46899999999999999999999999999999998654210 111 134578
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|+|||||.++ |.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 162 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCcc
Confidence 9999999765 888887766678999999999999999999999999999999999999999999999999998654311
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCC--CChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH--TSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~--~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
.. ........||+.|+|||++.+... +.++|||||||++|+|++|..||.+.+
T Consensus 163 ~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 217 (305)
T 2wtk_C 163 AA-------------------------DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN 217 (305)
T ss_dssp CS-------------------------SCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cc-------------------------ccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch
Confidence 00 011234568999999999987543 679999999999999999999999998
Q ss_pred HHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchhhccCCCCCCCCCcccC
Q 002051 876 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATD 955 (975)
Q Consensus 876 ~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~ 955 (975)
....+..+......++. .++..+.+||.+||..||.+||| +.++++||||+............| |.-.+.
T Consensus 218 ~~~~~~~i~~~~~~~~~--~~~~~l~~li~~~l~~dp~~Rps----~~~ll~~~~~~~~~~~~~~~~~~~----~~~~~~ 287 (305)
T 2wtk_C 218 IYKLFENIGKGSYAIPG--DCGPPLSDLLKGMLEYEPAKRFS----IRQIRQHSWFRKKHPPAEAPVPIP----PSPDTK 287 (305)
T ss_dssp HHHHHHHHHHCCCCCCS--SSCHHHHHHHHHHTCSSTTTSCC----HHHHHHSHHHHSCCCC-CCCCCCC----CC----
T ss_pred HHHHHHHHhcCCCCCCC--ccCHHHHHHHHHHccCChhhCCC----HHHHhcCcccccCCCCcCCCCCCC----CCcchH
Confidence 88888888877665543 57889999999999999999999 999999999987655433222222 112223
Q ss_pred cccccccCCcchhhh
Q 002051 956 TEKEYKVVDPGMQDL 970 (975)
Q Consensus 956 ~~~~~~~~~~~~~~~ 970 (975)
..+....+.+.+.+|
T Consensus 288 ~~~~~~~~~~~~~~l 302 (305)
T 2wtk_C 288 DRWRSMTVVPYLEDL 302 (305)
T ss_dssp CCC---CTTGGGC--
T ss_pred HHhhhceeehhhhhh
Confidence 345555555655554
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-38 Score=370.32 Aligned_cols=233 Identities=27% Similarity=0.458 Sum_probs=199.9
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------------------hccccccCCeEEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------------------MLNRNKTKTHVCLIT 721 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------------~~~~~~~~~~~~lV~ 721 (975)
.++|++++.||+|+||+||+|.++.+++.||||++.+.. +........++|+||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 357999999999999999999999999999999986432 112223678899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe---cCCcEEEeeccCCCccCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ---GNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~---~~g~vkL~DFG~a~~~~~~~ 798 (975)
|||.||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 101 e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~- 177 (486)
T 3mwu_A 101 ELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN- 177 (486)
T ss_dssp CCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-
T ss_pred EcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC-
Confidence 999999999998764 5699999999999999999999999999999999999995 4567999999999654311
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~ 878 (975)
......+||+.|+|||++.+. |+.++|||||||++|+|++|.+||.+.+..+
T Consensus 178 ---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~ 229 (486)
T 3mwu_A 178 ---------------------------TKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYD 229 (486)
T ss_dssp -------------------------------CCTTGGGGCCGGGGGSC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred ---------------------------CccCCCcCCCCCCCHHHhCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 112345799999999999874 8999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCC--CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCC
Q 002051 879 TFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935 (975)
Q Consensus 879 ~~~~i~~~~~~~p~--~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~ 935 (975)
.+..+..+.+.++. ...++..+++||.+||++||.+||| +.++|+||||+...
T Consensus 230 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t----~~~~l~hp~~~~~~ 284 (486)
T 3mwu_A 230 ILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRIT----ATQCLEHPWIQKYS 284 (486)
T ss_dssp HHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCC----HHHHHHCHHHHHTC
T ss_pred HHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcC----HHHHhcCHhhccCc
Confidence 99999887765543 3568999999999999999999999 99999999998653
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-37 Score=343.71 Aligned_cols=235 Identities=24% Similarity=0.378 Sum_probs=188.3
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh----------------------ccccc--cCCeEEEEE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM----------------------LNRNK--TKTHVCLIT 721 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~----------------------~~~~~--~~~~~~lV~ 721 (975)
...++|++++.||+|+||.||+|.+..+++.||||++..... ..... ...+.|+||
T Consensus 33 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 33 GNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp EEGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred cCCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 346789999999999999999999999999999999864310 01111 266789999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC-cEEEeeccCCCccCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g-~vkL~DFG~a~~~~~~~~~ 800 (975)
||+.+++|.+++.. +++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++.....
T Consensus 113 e~~~~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~--- 184 (330)
T 3nsz_A 113 EHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG--- 184 (330)
T ss_dssp ECCCCCCHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT---
T ss_pred eccCchhHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC---
Confidence 99999999999854 89999999999999999999999999999999999999777 8999999999654311
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCC-CCHHH
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG-KTRQK 878 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~-~~~~~ 878 (975)
.......||+.|+|||++.+ ..++.++|||||||++|+|++|..||.. ....+
T Consensus 185 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~ 239 (330)
T 3nsz_A 185 -------------------------QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD 239 (330)
T ss_dssp -------------------------CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHH
T ss_pred -------------------------CccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHH
Confidence 11234578999999999987 6789999999999999999999999954 33333
Q ss_pred HHHHHHh-------------cCCCC----------------------CCCCCCcHHHHHHHHHhcccCccccCCChhhHH
Q 002051 879 TFANILH-------------KDLKF----------------------PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 923 (975)
Q Consensus 879 ~~~~i~~-------------~~~~~----------------------p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~ 923 (975)
.+..+.. ..... .....++..+.+||.+||++||.+||| ++
T Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----a~ 315 (330)
T 3nsz_A 240 QLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLT----AR 315 (330)
T ss_dssp HHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCC----HH
T ss_pred HHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCC----HH
Confidence 3332211 11111 111226889999999999999999999 99
Q ss_pred HHHcCCCccCCCcc
Q 002051 924 EIKKHPFFKGVNWA 937 (975)
Q Consensus 924 elL~Hp~f~~~~~~ 937 (975)
|+|+||||+++.+.
T Consensus 316 e~l~hp~f~~~~~~ 329 (330)
T 3nsz_A 316 EAMEHPYFYTVVKD 329 (330)
T ss_dssp HHHTSGGGTTCC--
T ss_pred HHhcCccHhhhccC
Confidence 99999999998764
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-38 Score=372.46 Aligned_cols=235 Identities=28% Similarity=0.438 Sum_probs=202.8
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEE
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCL 719 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~l 719 (975)
..++|++.+.||+|+||.||+|.++.+|+.||||++.+... ........++|+
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 34679999999999999999999999999999999864321 112226778999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE---ecCCcEEEeeccCCCccCC
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl---~~~g~vkL~DFG~a~~~~~ 796 (975)
|||||.||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 104 v~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp EECCCCSCBHHHHHHTC--SCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred EEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 99999999999999764 569999999999999999999999999999999999999 4678999999999865431
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 876 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~ 876 (975)
. ......+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+.
T Consensus 182 ~----------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~ 232 (484)
T 3nyv_A 182 S----------------------------KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE 232 (484)
T ss_dssp C----------------------------CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred c----------------------------cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH
Confidence 1 11223579999999999987 589999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCc
Q 002051 877 QKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936 (975)
Q Consensus 877 ~~~~~~i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~ 936 (975)
.+.+..+..+.+.++.+ ..++..+++||++||++||.+||| +.|+|+||||+...+
T Consensus 233 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s----~~e~l~h~~~~~~~~ 290 (484)
T 3nyv_A 233 YDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRIS----ARDALDHEWIQTYTK 290 (484)
T ss_dssp HHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCC----HHHHHTSHHHHHHTC
T ss_pred HHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcC----HHHHhhChhhccccc
Confidence 99999998887665433 568999999999999999999999 999999999986544
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=354.91 Aligned_cols=230 Identities=33% Similarity=0.570 Sum_probs=197.8
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch---------------------------------hccccccCC
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV---------------------------------MLNRNKTKT 715 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~---------------------------------~~~~~~~~~ 715 (975)
++|.+.+.||+|+||.||+|.++.+|+.||||++.... +........
T Consensus 94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 173 (365)
T 2y7j_A 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS 173 (365)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence 57999999999999999999999999999999985431 011112567
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
+.|+|||||+|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++....
T Consensus 174 ~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~ 251 (365)
T 2y7j_A 174 FMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLE 251 (365)
T ss_dssp EEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccC
Confidence 899999999999999999864 569999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC------CCCCChhHHHHHHHHHHHHHhCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG------AGHTSAVDWWALGILLYEMLYGYT 869 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~------~~~~~k~DIWSLG~il~ell~G~~ 869 (975)
.. ......+||+.|+|||++.+ ..++.++|||||||++|+|++|..
T Consensus 252 ~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~ 303 (365)
T 2y7j_A 252 PG----------------------------EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSP 303 (365)
T ss_dssp TT----------------------------CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSC
T ss_pred CC----------------------------cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCC
Confidence 11 11234679999999999863 357889999999999999999999
Q ss_pred CCCCCCHHHHHHHHHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCcc
Q 002051 870 PFRGKTRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932 (975)
Q Consensus 870 Pf~~~~~~~~~~~i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~ 932 (975)
||.+.+....+..+..+...++.. ...+..+.+||.+||+.||.+||| +.++|+||||+
T Consensus 304 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~ell~hp~f~ 364 (365)
T 2y7j_A 304 PFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLT----AEQALQHPFFE 364 (365)
T ss_dssp SSCCSSHHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCC----HHHHHHSGGGC
T ss_pred CCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcC----HHHHhcCcccC
Confidence 999988888888888776655432 457889999999999999999999 99999999996
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-37 Score=339.76 Aligned_cols=232 Identities=30% Similarity=0.497 Sum_probs=192.4
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-------------------------ccccccCCeEEEEEec
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-------------------------LNRNKTKTHVCLITDY 723 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-------------------------~~~~~~~~~~~lV~Ey 723 (975)
++|.+.++||+|+||.||+|.+..+++.||+|++.+... .....+...+|+||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 579999999999999999999999999999999865421 1122266789999999
Q ss_pred cCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE---ecCCcEEEeeccCCCccCCCC
Q 002051 724 CPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 724 ~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl---~~~g~vkL~DFG~a~~~~~~~ 798 (975)
|++++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~- 180 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD- 180 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCc-
Confidence 9999999988542 23569999999999999999999999999999999999999 45678999999999654311
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~ 878 (975)
.......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+...
T Consensus 181 ---------------------------~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~ 232 (285)
T 3is5_A 181 ---------------------------EHSTNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE 232 (285)
T ss_dssp ---------------------------------CTTGGGCCHHHHTT-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred ---------------------------ccCcCcccccCcCChHHhcc-CCCcccCeehHHHHHHHHHhCCCCCCCCCHHH
Confidence 11234578999999999864 58899999999999999999999999988888
Q ss_pred HHHHHHhcCCCCCCC-CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 879 TFANILHKDLKFPSS-TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 879 ~~~~i~~~~~~~p~~-~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
....+......++.. ..+++.+.+||.+||+.||.+||| +.|+|+||||+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~e~l~hp~f~~ 284 (285)
T 3is5_A 233 VQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPS----AAQVLHHEWFKQ 284 (285)
T ss_dssp HHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCC----HHHHHTSGGGGC
T ss_pred HHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcC----HHHHhcCHHhhc
Confidence 777776655544433 447899999999999999999999 999999999985
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-37 Score=349.00 Aligned_cols=241 Identities=24% Similarity=0.323 Sum_probs=193.7
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhcc--------------------------ccc--------c
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN--------------------------RNK--------T 713 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~--------------------------~~~--------~ 713 (975)
.++|++++.||+|+||.||+|++..+|+.||||++....... ... .
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 568999999999999999999999999999999885432110 000 1
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 714 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 714 ~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
.+.+|+|||||. ++|.+.+... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 96 ~~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 173 (351)
T 3mi9_A 96 KGSIYLVFDFCE-HDLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA 173 (351)
T ss_dssp -CEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred CceEEEEEeccC-CCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhccc
Confidence 457899999995 5888887654 34699999999999999999999999999999999999999999999999999976
Q ss_pred cCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCC
Q 002051 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFR 872 (975)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~ 872 (975)
....... ........+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.
T Consensus 174 ~~~~~~~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 230 (351)
T 3mi9_A 174 FSLAKNS-----------------------QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ 230 (351)
T ss_dssp CCCCSSS-----------------------SCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred ccccccc-----------------------cccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCC
Confidence 5421110 1112234678999999999976 458999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCCCCCCC--CC----------------------------CcHHHHHHHHHhcccCccccCCChhhH
Q 002051 873 GKTRQKTFANILHKDLKFPSS--TP----------------------------TSLHAKQLMYRLLHRDPKSRLGSHEGA 922 (975)
Q Consensus 873 ~~~~~~~~~~i~~~~~~~p~~--~~----------------------------~s~~~~~li~~~L~~dP~~R~t~~~~~ 922 (975)
+.+....+..+......++.. .. .++.+.+||.+||++||.+||| +
T Consensus 231 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~ 306 (351)
T 3mi9_A 231 GNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRID----S 306 (351)
T ss_dssp CSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCC----H
T ss_pred CCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCC----H
Confidence 998888777776532222111 10 2677999999999999999999 9
Q ss_pred HHHHcCCCccCCCcc
Q 002051 923 NEIKKHPFFKGVNWA 937 (975)
Q Consensus 923 ~elL~Hp~f~~~~~~ 937 (975)
+|+|+||||++..+.
T Consensus 307 ~e~l~hp~f~~~~~~ 321 (351)
T 3mi9_A 307 DDALNHDFFWSDPMP 321 (351)
T ss_dssp HHHHTSGGGGSSSCC
T ss_pred HHHhCCCCcCCCCCc
Confidence 999999999875443
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=339.70 Aligned_cols=231 Identities=28% Similarity=0.499 Sum_probs=200.2
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEEecc
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITDYC 724 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~Ey~ 724 (975)
++|++.+.||+|+||.||+|.+..++..||+|++.+.. +.........+|+|||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (277)
T 3f3z_A 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC 88 (277)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence 47999999999999999999999999999999986532 112223677899999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE---ecCCcEEEeeccCCCccCCCCCCC
Q 002051 725 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 725 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl---~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
+|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 89 ~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~---- 162 (277)
T 3f3z_A 89 TGGELFERVVHK--RVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG---- 162 (277)
T ss_dssp CSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT----
T ss_pred CCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc----
Confidence 999999998774 569999999999999999999999999999999999999 77889999999998654311
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~ 881 (975)
.......||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+......
T Consensus 163 ------------------------~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~ 217 (277)
T 3f3z_A 163 ------------------------KMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVML 217 (277)
T ss_dssp ------------------------SCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred ------------------------cchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 112345799999999998765 8999999999999999999999999999988888
Q ss_pred HHHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 882 NILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 882 ~i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
.+......++.. ..++..+.+||.+||++||.+||| +.++|+||||++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s----~~~~l~h~~~~~~ 268 (277)
T 3f3z_A 218 KIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRIT----SLQALEHEWFEKQ 268 (277)
T ss_dssp HHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCC----HHHHTTSHHHHHH
T ss_pred HHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcC----HHHHhcCHHHhcc
Confidence 888877766643 357899999999999999999999 9999999999753
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=354.99 Aligned_cols=233 Identities=27% Similarity=0.419 Sum_probs=178.3
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------------------hcccc------ccCC
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------------------MLNRN------KTKT 715 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------------~~~~~------~~~~ 715 (975)
.++|++++.||+|+||.||+|.+..+|+.||||++.... +.... ....
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 478999999999999999999999999999999986421 00000 1235
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
.+|+||||+ +++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~ 183 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183 (367)
T ss_dssp CCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC--------
T ss_pred eEEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence 689999999 8899999865 469999999999999999999999999999999999999999999999999986532
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 874 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~ 874 (975)
. .....+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.
T Consensus 184 ~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 233 (367)
T 2fst_X 184 D------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233 (367)
T ss_dssp -------------------------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred c------------------------------cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 1 1224579999999999987 67899999999999999999999999998
Q ss_pred CHHHHHHHHHhcCC-----------------------CCCC------CCCCcHHHHHHHHHhcccCccccCCChhhHHHH
Q 002051 875 TRQKTFANILHKDL-----------------------KFPS------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 925 (975)
Q Consensus 875 ~~~~~~~~i~~~~~-----------------------~~p~------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~el 925 (975)
+....+..+..... ..+. ....++.+.+||.+||++||.+||| +.|+
T Consensus 234 ~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t----~~e~ 309 (367)
T 2fst_X 234 DHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT----AAQA 309 (367)
T ss_dssp SHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCC----HHHH
T ss_pred CHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcC----HHHH
Confidence 88777776654110 0010 1245788999999999999999999 9999
Q ss_pred HcCCCccCCCcch
Q 002051 926 KKHPFFKGVNWAL 938 (975)
Q Consensus 926 L~Hp~f~~~~~~~ 938 (975)
|.||||+......
T Consensus 310 L~hp~~~~~~~~~ 322 (367)
T 2fst_X 310 LAHAYFAQYHDPD 322 (367)
T ss_dssp HTSGGGTTTCCGG
T ss_pred hcChhhhhccCCC
Confidence 9999999876544
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-37 Score=353.95 Aligned_cols=238 Identities=26% Similarity=0.456 Sum_probs=192.1
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------cccc--------------
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------LNRN-------------- 711 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------~~~~-------------- 711 (975)
...++|++++.||+|+||+||+|.+..+|+.||||++..... ....
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~ 83 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPP 83 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHTTCCCTTBCCEEEEEEEC-----------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHHcCCCCccchhheeeecCcccccccccc
Confidence 346789999999999999999999999999999998754310 0000
Q ss_pred ------------------------ccCCeEEEEEeccCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002051 712 ------------------------KTKTHVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGI 765 (975)
Q Consensus 712 ------------------------~~~~~~~lV~Ey~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qIl~aL~yLH~~gI 765 (975)
....++|+|||||+ ++|.+.+.. .....+++..++.++.||+.||.|||++||
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi 162 (383)
T 3eb0_A 84 DDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGI 162 (383)
T ss_dssp --------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred cccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcC
Confidence 23445899999996 588877753 234679999999999999999999999999
Q ss_pred eecCCCCCCEEEe-cCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhc
Q 002051 766 IYRDLKPENVLLQ-GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA 844 (975)
Q Consensus 766 iHrDIKp~NILl~-~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~ 844 (975)
+||||||+|||++ .++.+||+|||+|+..... .......||+.|+|||++.
T Consensus 163 ~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~----------------------------~~~~~~~~t~~y~aPE~~~ 214 (383)
T 3eb0_A 163 CHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPS----------------------------EPSVAYICSRFYRAPELML 214 (383)
T ss_dssp ECSCCCGGGEEEETTTTEEEECCCTTCEECCTT----------------------------SCCCCCCCCSSCCCHHHHT
T ss_pred ccCccCHHHEEEcCCCCcEEEEECCCCcccCCC----------------------------CCCcCcccCCCccCHHHhc
Confidence 9999999999998 6889999999999654311 1223457899999999998
Q ss_pred CCC-CCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-----------------CCCCCC----------CCCC
Q 002051 845 GAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK-----------------DLKFPS----------STPT 896 (975)
Q Consensus 845 ~~~-~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~-----------------~~~~p~----------~~~~ 896 (975)
+.. ++.++|||||||++|+|++|++||.+.+..+.+..++.. ...+|. ....
T Consensus 215 ~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (383)
T 3eb0_A 215 GATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGT 294 (383)
T ss_dssp TCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTC
T ss_pred CCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCC
Confidence 754 899999999999999999999999999888887777641 111111 2346
Q ss_pred cHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCc
Q 002051 897 SLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936 (975)
Q Consensus 897 s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~ 936 (975)
+..+.+||.+||++||.+||| +.|+|+||||+.+.+
T Consensus 295 ~~~~~~li~~~L~~dP~~R~t----~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 295 PSLAIDLLEQILRYEPDLRIN----PYEAMAHPFFDHLRN 330 (383)
T ss_dssp CHHHHHHHHHHCCSSGGGSCC----HHHHHTSGGGHHHHH
T ss_pred CHHHHHHHHHHccCChhhCCC----HHHHhcCHHHHHHHh
Confidence 788999999999999999999 999999999987644
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-38 Score=353.88 Aligned_cols=243 Identities=28% Similarity=0.432 Sum_probs=199.4
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------------ccccccCCeEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------------LNRNKTKTHVC 718 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------------~~~~~~~~~~~ 718 (975)
.++|++++.||+|+||.||+|.+..+++.||+|++.+... .....+..++|
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 104 (345)
T 3hko_A 25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC 104 (345)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence 3579999999999999999999999999999999865421 12223677899
Q ss_pred EEEeccCCCCHHHHHhhC--------------------------------------CCCCCCHHHHHHHHHHHHHHHHHH
Q 002051 719 LITDYCPGGELFLLLDRQ--------------------------------------PTKVLKEDAVRFYAAEVVVALEYL 760 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~--------------------------------------~~~~l~~~~i~~i~~qIl~aL~yL 760 (975)
+|||||+||+|.+++... ....+++..++.++.||+.||.||
T Consensus 105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L 184 (345)
T 3hko_A 105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL 184 (345)
T ss_dssp EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 999999999999998521 011246788899999999999999
Q ss_pred HHCCCeecCCCCCCEEEecCC--cEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCcc
Q 002051 761 HCQGIIYRDLKPENVLLQGNG--HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYI 838 (975)
Q Consensus 761 H~~gIiHrDIKp~NILl~~~g--~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~ 838 (975)
|++||+||||||+|||++.++ .+||+|||++..+..... ..........||+.|+
T Consensus 185 H~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~-----------------------~~~~~~~~~~gt~~y~ 241 (345)
T 3hko_A 185 HNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNN-----------------------GEYYGMTTKAGTPYFV 241 (345)
T ss_dssp HHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTC-----------------------C--------CCCGGGC
T ss_pred HHCCccccCCChhhEEEecCCCceEEEeeccccccccccCc-----------------------cccccccccCCCcccc
Confidence 999999999999999998776 899999999965431110 0011123457999999
Q ss_pred chhhhcC--CCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCC--CCCcHHHHHHHHHhcccCccc
Q 002051 839 APEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKS 914 (975)
Q Consensus 839 aPE~l~~--~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~ 914 (975)
|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+..+......++.. ..++..+.+||.+||++||.+
T Consensus 242 aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 321 (345)
T 3hko_A 242 APEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDE 321 (345)
T ss_dssp CHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTT
T ss_pred CchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhH
Confidence 9999975 678899999999999999999999999999999998888877665543 347899999999999999999
Q ss_pred cCCChhhHHHHHcCCCccCCCcc
Q 002051 915 RLGSHEGANEIKKHPFFKGVNWA 937 (975)
Q Consensus 915 R~t~~~~~~elL~Hp~f~~~~~~ 937 (975)
||| +.++|+||||+++.+.
T Consensus 322 Rps----~~~~l~hp~~~~~~~~ 340 (345)
T 3hko_A 322 RFD----AMRALQHPWISQFSDK 340 (345)
T ss_dssp SCC----HHHHHHSHHHHTTSSC
T ss_pred CCC----HHHHhcChhhccChHh
Confidence 999 9999999999988664
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-37 Score=355.12 Aligned_cols=240 Identities=28% Similarity=0.455 Sum_probs=190.7
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------cccc------ccCCeEEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------LNRN------KTKTHVCLIT 721 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------~~~~------~~~~~~~lV~ 721 (975)
..+|++++.||+|+||+||+|++..+++ ||+|.+..... .... .+..++|+||
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~ 117 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVL 117 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcchHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEe
Confidence 4579999999999999999999987776 77777643210 0000 1233588999
Q ss_pred eccCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe-cCCcEEEeeccCCCccCCCC
Q 002051 722 DYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 722 Ey~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~-~~g~vkL~DFG~a~~~~~~~ 798 (975)
|||++ ++...+.. .....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+|+.....
T Consensus 118 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~- 195 (394)
T 4e7w_A 118 EYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG- 195 (394)
T ss_dssp ECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTT-
T ss_pred eccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCC-
Confidence 99965 55444432 1235799999999999999999999999999999999999999 7999999999999654311
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
......+||+.|+|||++.+. .|+.++|||||||++|+|++|++||.+.+..
T Consensus 196 ---------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~ 248 (394)
T 4e7w_A 196 ---------------------------EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI 248 (394)
T ss_dssp ---------------------------CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ---------------------------CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 122345789999999999775 5899999999999999999999999999888
Q ss_pred HHHHHHHhc-----------------CCCCCC----------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCC
Q 002051 878 KTFANILHK-----------------DLKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930 (975)
Q Consensus 878 ~~~~~i~~~-----------------~~~~p~----------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~ 930 (975)
+.+..+... ...++. ....++++.+||.+||++||.+||| +.|+|+|||
T Consensus 249 ~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l~hp~ 324 (394)
T 4e7w_A 249 DQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLT----AIEALCHPF 324 (394)
T ss_dssp HHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCC----HHHHHTSGG
T ss_pred HHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCC----HHHHhcChh
Confidence 877776542 111111 1236889999999999999999999 999999999
Q ss_pred ccCCCcchhhc
Q 002051 931 FKGVNWALVRC 941 (975)
Q Consensus 931 f~~~~~~~~~~ 941 (975)
|+++.|.....
T Consensus 325 f~~~~~~~~~~ 335 (394)
T 4e7w_A 325 FDELRTGEARM 335 (394)
T ss_dssp GSTTTSSCCCC
T ss_pred hhhhccccccC
Confidence 99998875543
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=354.28 Aligned_cols=241 Identities=26% Similarity=0.389 Sum_probs=197.7
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-------------------------hccccccCCeEE
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------------------MLNRNKTKTHVC 718 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------------------~~~~~~~~~~~~ 718 (975)
..+..++|++++.||+|+||.||+|.+..+++.||+|++.... +........++|
T Consensus 28 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 107 (360)
T 3eqc_A 28 GELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 107 (360)
T ss_dssp CCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEE
T ss_pred cccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEE
Confidence 4566789999999999999999999999999999999986431 111222577899
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~-gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
+|||||+|++|.+++... ..+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++.....
T Consensus 108 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~- 184 (360)
T 3eqc_A 108 ICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID- 184 (360)
T ss_dssp EEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH-
T ss_pred EEEECCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCccccc-
Confidence 999999999999999874 4699999999999999999999996 999999999999999999999999999854210
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||...+..
T Consensus 185 ----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 236 (360)
T 3eqc_A 185 ----------------------------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 236 (360)
T ss_dssp ----------------------------HC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHH
T ss_pred ----------------------------ccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 1123457999999999999999999999999999999999999999876654
Q ss_pred HHHH------------------------------------------HHHhcCCCCCCCCCCcHHHHHHHHHhcccCcccc
Q 002051 878 KTFA------------------------------------------NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915 (975)
Q Consensus 878 ~~~~------------------------------------------~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R 915 (975)
.... .+............++.++.+||.+||++||.+|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 316 (360)
T 3eqc_A 237 ELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAER 316 (360)
T ss_dssp HHHHHHC------------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTS
T ss_pred HHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhC
Confidence 4322 2222222222233478899999999999999999
Q ss_pred CCChhhHHHHHcCCCccCCCcchh
Q 002051 916 LGSHEGANEIKKHPFFKGVNWALV 939 (975)
Q Consensus 916 ~t~~~~~~elL~Hp~f~~~~~~~~ 939 (975)
|| ++|+|+||||++.++..+
T Consensus 317 pt----~~ell~hp~~~~~~~~~~ 336 (360)
T 3eqc_A 317 AD----LKQLMVHAFIKRSDAEEV 336 (360)
T ss_dssp CC----HHHHHTSHHHHHHHHSCC
T ss_pred CC----HHHHhhChHhhcchHhhh
Confidence 99 999999999997766543
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-37 Score=366.33 Aligned_cols=232 Identities=28% Similarity=0.448 Sum_probs=198.8
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-------------------------------------ccc
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-------------------------------------LNR 710 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-------------------------------------~~~ 710 (975)
.++|+++++||+|+||+||+|.++.+++.||||++.+... ...
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 5689999999999999999999999999999999865321 111
Q ss_pred cccCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC---cEEEee
Q 002051 711 NKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTD 787 (975)
Q Consensus 711 ~~~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g---~vkL~D 787 (975)
..+..++|||||||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~D 192 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVD 192 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECC
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEE
Confidence 22677899999999999999999774 5699999999999999999999999999999999999999776 699999
Q ss_pred ccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhC
Q 002051 788 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYG 867 (975)
Q Consensus 788 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G 867 (975)
||++...... ......+||+.|+|||++.+ .++.++|||||||++|+|++|
T Consensus 193 fg~a~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g 243 (504)
T 3q5i_A 193 FGLSSFFSKD----------------------------YKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCG 243 (504)
T ss_dssp CTTCEECCTT----------------------------SCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHS
T ss_pred CCCCEEcCCC----------------------------CccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhC
Confidence 9999654321 11234579999999999875 589999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 868 YTPFRGKTRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 868 ~~Pf~~~~~~~~~~~i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
.+||.+.+..+.+..+..+.+.++.. ..++..+++||++||++||.+||| +.|+|+||||+..
T Consensus 244 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t----~~e~l~h~~~~~~ 308 (504)
T 3q5i_A 244 YPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCT----AEEALNSRWIKKY 308 (504)
T ss_dssp SCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCC----HHHHHTSHHHHHT
T ss_pred CCCCCCCCHHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCC----HHHHhcCHhhhhc
Confidence 99999999999999998887665532 568899999999999999999999 9999999999754
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-37 Score=357.33 Aligned_cols=255 Identities=22% Similarity=0.338 Sum_probs=180.1
Q ss_pred CCccc-ccccccCCceEEEEEEEe--CCCeEEEEEEeccchh----------------------cccc--ccCCeEEEEE
Q 002051 669 QHFRP-IKPLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVM----------------------LNRN--KTKTHVCLIT 721 (975)
Q Consensus 669 ~~y~i-~~~LG~G~fG~Vy~a~~~--~t~~~vAiK~l~~~~~----------------------~~~~--~~~~~~~lV~ 721 (975)
+.|.+ .++||+|+||+||+|+++ .+++.||||++..... .... ....++||||
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 45766 458999999999999976 5689999999875421 1111 2467899999
Q ss_pred eccCCCCHHHHHhhC-------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE----ecCCcEEEeeccC
Q 002051 722 DYCPGGELFLLLDRQ-------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL----QGNGHVSLTDFDL 790 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~-------~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl----~~~g~vkL~DFG~ 790 (975)
||| +++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 100 e~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 178 (405)
T 3rgf_A 100 DYA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 178 (405)
T ss_dssp ECC-SEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTC
T ss_pred eCC-CCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCC
Confidence 999 56898887631 12259999999999999999999999999999999999999 6778999999999
Q ss_pred CCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCC
Q 002051 791 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYT 869 (975)
Q Consensus 791 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~ 869 (975)
++....... ........+||+.|+|||++.+. .++.++|||||||++|+|++|.+
T Consensus 179 a~~~~~~~~------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~ 234 (405)
T 3rgf_A 179 ARLFNSPLK------------------------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 234 (405)
T ss_dssp CC----------------------------------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSC
T ss_pred ceecCCCCc------------------------ccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCC
Confidence 976532110 01122346899999999999874 48999999999999999999999
Q ss_pred CCCCCCH---------HHHHHHHHhcCCCCCC------------------------------------CCCCcHHHHHHH
Q 002051 870 PFRGKTR---------QKTFANILHKDLKFPS------------------------------------STPTSLHAKQLM 904 (975)
Q Consensus 870 Pf~~~~~---------~~~~~~i~~~~~~~p~------------------------------------~~~~s~~~~~li 904 (975)
||.+... .+.+..+.......+. ....+..+.+||
T Consensus 235 pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll 314 (405)
T 3rgf_A 235 IFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLL 314 (405)
T ss_dssp TTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHH
T ss_pred CCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHH
Confidence 9976554 2444444331100000 011256789999
Q ss_pred HHhcccCccccCCChhhHHHHHcCCCccCCCcchhhccCCCCCCCCCc
Q 002051 905 YRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLF 952 (975)
Q Consensus 905 ~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~ 952 (975)
.+||++||.+||| ++|+|+||||++..+..........++.|..
T Consensus 315 ~~~L~~dP~~R~t----a~e~L~hp~f~~~~~~~~~~~~~~~~~~~~~ 358 (405)
T 3rgf_A 315 QKLLTMDPIKRIT----SEQAMQDPYFLEDPLPTSDVFAGCQIPYPKR 358 (405)
T ss_dssp HHHSCSSGGGSCC----HHHHHTSGGGTSSSCCCSSTTTTSCCCC---
T ss_pred HHHccCCcccCCC----HHHHhcChhhccCCCCcccccccCCCCCCCc
Confidence 9999999999999 9999999999998877655444444444443
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-37 Score=348.78 Aligned_cols=239 Identities=27% Similarity=0.388 Sum_probs=193.2
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-----------------------------hccccccCCeEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-----------------------------MLNRNKTKTHVC 718 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-----------------------------~~~~~~~~~~~~ 718 (975)
.++|++++.||+|+||.||+|.+..+|+.||||++.... +........++|
T Consensus 9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 88 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS 88 (346)
T ss_dssp ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence 568999999999999999999999999999999986421 111122567889
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
+|||||.+ +|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 89 lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 166 (346)
T 1ua2_A 89 LVFDFMET-DLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN 166 (346)
T ss_dssp EEEECCSE-EHHHHHTTC-CSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC
T ss_pred EEEEcCCC-CHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCc
Confidence 99999965 899988764 3468999999999999999999999999999999999999999999999999986543111
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
......+||+.|+|||++.+. .++.++|||||||++|+|++|.+||.+.+..
T Consensus 167 ---------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~ 219 (346)
T 1ua2_A 167 ---------------------------RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL 219 (346)
T ss_dssp ---------------------------CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ---------------------------ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH
Confidence 122345789999999999764 5788999999999999999999999999888
Q ss_pred HHHHHHHhcCCC-----CCC---------------------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 878 KTFANILHKDLK-----FPS---------------------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 878 ~~~~~i~~~~~~-----~p~---------------------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
+.+..+...... ++. ....+..+.+||.+||..||.+||| +.|+|+||||
T Consensus 220 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~h~~f 295 (346)
T 1ua2_A 220 DQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARIT----ATQALKMKYF 295 (346)
T ss_dssp HHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCC----HHHHHTSGGG
T ss_pred HHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCC----HHHHhcChhh
Confidence 888777652111 110 0345688999999999999999999 9999999999
Q ss_pred cCCCcchh
Q 002051 932 KGVNWALV 939 (975)
Q Consensus 932 ~~~~~~~~ 939 (975)
++..+...
T Consensus 296 ~~~~~~~~ 303 (346)
T 1ua2_A 296 SNRPGPTP 303 (346)
T ss_dssp TSSSCCCC
T ss_pred hcCCCCCC
Confidence 98776544
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=343.48 Aligned_cols=232 Identities=34% Similarity=0.569 Sum_probs=200.6
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEEec
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITDY 723 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~Ey 723 (975)
.++|.+.+.||+|+||.||+|++..+|+.||+|++.... +........++|+||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 357999999999999999999999999999999986532 11122367789999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE---ecCCcEEEeeccCCCccCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl---~~~g~vkL~DFG~a~~~~~~~~~ 800 (975)
|+|++|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 88 ~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~---- 161 (304)
T 2jam_A 88 VSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN---- 161 (304)
T ss_dssp CCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC----
T ss_pred CCCccHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC----
Confidence 9999999999764 469999999999999999999999999999999999999 6788999999999854321
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~ 880 (975)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+
T Consensus 162 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~ 216 (304)
T 2jam_A 162 -------------------------GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLF 216 (304)
T ss_dssp -------------------------BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred -------------------------CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence 0112346899999999999999999999999999999999999999999888888
Q ss_pred HHHHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 881 ANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 881 ~~i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
..+..+...++.. ..++..+.+||.+||..||.+||| +.++|+||||++.
T Consensus 217 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~~l~h~~~~~~ 268 (304)
T 2jam_A 217 EKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYT----CEKALSHPWIDGN 268 (304)
T ss_dssp HHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCC----HHHHHTSHHHHSS
T ss_pred HHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcC----HHHHhcCccccCC
Confidence 8888876655433 567899999999999999999999 9999999999764
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=339.26 Aligned_cols=234 Identities=30% Similarity=0.541 Sum_probs=173.0
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLI 720 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV 720 (975)
.++|++.+.||+|+||.||+|.+..+|+.||||++.+... .........+|+|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 4689999999999999999999999999999999865321 1112256789999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 800 (975)
|||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 90 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-- 166 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH-- 166 (278)
T ss_dssp EECCTTEEHHHHHHTC-SSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-----
T ss_pred EecCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC--
Confidence 9999999999999764 3569999999999999999999999999999999999999999999999999986543110
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~ 880 (975)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||........+
T Consensus 167 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~ 221 (278)
T 3cok_A 167 -------------------------EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL 221 (278)
T ss_dssp --------------------------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---
T ss_pred -------------------------CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH
Confidence 1122357899999999999988999999999999999999999999887665555
Q ss_pred HHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCC
Q 002051 881 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935 (975)
Q Consensus 881 ~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~ 935 (975)
..+.......| ..++..+.+||.+||+.||.+||| +.++++||||....
T Consensus 222 ~~~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps----~~~~l~h~~~~~~~ 270 (278)
T 3cok_A 222 NKVVLADYEMP--SFLSIEAKDLIHQLLRRNPADRLS----LSSVLDHPFMSRNS 270 (278)
T ss_dssp --CCSSCCCCC--TTSCHHHHHHHHHHSCSSGGGSCC----HHHHTTSTTTC---
T ss_pred HHHhhcccCCc--cccCHHHHHHHHHHcccCHhhCCC----HHHHhcCccccCCC
Confidence 55444443333 347889999999999999999999 99999999998643
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=356.42 Aligned_cols=231 Identities=25% Similarity=0.386 Sum_probs=186.1
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch---------------h----------------ccccc----
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV---------------M----------------LNRNK---- 712 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~---------------~----------------~~~~~---- 712 (975)
.++|+++++||+|+||+||+|++..+++.||||++.... + +....
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 578999999999999999999999999999999986531 0 00001
Q ss_pred cCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCC----------
Q 002051 713 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNG---------- 781 (975)
Q Consensus 713 ~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~-gIiHrDIKp~NILl~~~g---------- 781 (975)
...++||||||| +++|.+++.......+++..++.++.||+.||.|||++ ||+||||||+|||++.++
T Consensus 116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~ 194 (397)
T 1wak_A 116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEA 194 (397)
T ss_dssp TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHH
T ss_pred CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhh
Confidence 345789999999 77888888776556799999999999999999999998 999999999999999775
Q ss_pred ---------------------------------------cEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCccccc
Q 002051 782 ---------------------------------------HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 822 (975)
Q Consensus 782 ---------------------------------------~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 822 (975)
.+||+|||++.....
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~-------------------------- 248 (397)
T 1wak_A 195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK-------------------------- 248 (397)
T ss_dssp C---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTB--------------------------
T ss_pred HHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccc--------------------------
Confidence 799999999865321
Q ss_pred ccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhcCCCC------
Q 002051 823 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT------RQKTFANILHKDLKF------ 890 (975)
Q Consensus 823 ~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~------~~~~~~~i~~~~~~~------ 890 (975)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+ ....+..+.......
T Consensus 249 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 324 (397)
T 1wak_A 249 ----HFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIV 324 (397)
T ss_dssp ----CSCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHH
T ss_pred ----cCccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhh
Confidence 1223478999999999999999999999999999999999999997644 223333332210000
Q ss_pred ----------------------------------CCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 891 ----------------------------------PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 891 ----------------------------------p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
......+..+.+||.+||++||.+||| ++|+|+||||++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e~l~hp~~~~ 397 (397)
T 1wak_A 325 AGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRAT----AAECLRHPWLNS 397 (397)
T ss_dssp HCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCC----HHHHHTSGGGGC
T ss_pred cccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCC----HHHHhhCccccC
Confidence 001123457889999999999999999 999999999974
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-37 Score=351.30 Aligned_cols=235 Identities=24% Similarity=0.388 Sum_probs=191.3
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-------------h------------cccc-----ccCCeE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------M------------LNRN-----KTKTHV 717 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------~------------~~~~-----~~~~~~ 717 (975)
.++|++++.||+|+||.||+|.+..+++.||||++.... + .... .....+
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 468999999999999999999999999999999986421 0 0000 122578
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|+||||+. ++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 106 ~iv~e~~~-~~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 181 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181 (364)
T ss_dssp EEEEECCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGG
T ss_pred EEEEcccC-cCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCC
Confidence 99999995 699999976 45999999999999999999999999999999999999999999999999999654321
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 876 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~ 876 (975)
.. ........+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+.
T Consensus 182 ~~------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 237 (364)
T 3qyz_A 182 HD------------------------HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237 (364)
T ss_dssp GC------------------------BCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSG
T ss_pred CC------------------------ccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCCh
Confidence 10 0111234689999999998764 4589999999999999999999999998887
Q ss_pred HHHHHHHHhcCCC--------------------CC--C-------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 877 QKTFANILHKDLK--------------------FP--S-------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 877 ~~~~~~i~~~~~~--------------------~p--~-------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
.+.+..+...... .+ . ...++..+.+||.+||++||.+||| +.|+|+
T Consensus 238 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l~ 313 (364)
T 3qyz_A 238 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE----VEQALA 313 (364)
T ss_dssp GGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCC----HHHHHT
T ss_pred HHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCC----HHHHhc
Confidence 7766665431100 00 0 1346889999999999999999999 999999
Q ss_pred CCCccCC
Q 002051 928 HPFFKGV 934 (975)
Q Consensus 928 Hp~f~~~ 934 (975)
||||+..
T Consensus 314 hp~~~~~ 320 (364)
T 3qyz_A 314 HPYLEQY 320 (364)
T ss_dssp SGGGTTT
T ss_pred Ccchhhc
Confidence 9999976
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-37 Score=347.70 Aligned_cols=234 Identities=25% Similarity=0.408 Sum_probs=187.4
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch----------------------------hccccccCCeE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV----------------------------MLNRNKTKTHV 717 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~----------------------------~~~~~~~~~~~ 717 (975)
+..++|++++.||+|+||.||+|.+ .+++.||||++.... +........++
T Consensus 6 ~~~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~ 84 (343)
T 3dbq_A 6 VKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI 84 (343)
T ss_dssp SSSCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred eecCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEE
Confidence 4567899999999999999999998 568999999986431 01111256789
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|||||++ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||+++.....
T Consensus 85 ~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~ 160 (343)
T 3dbq_A 85 YMVMECG-NIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 160 (343)
T ss_dssp EEEECCC-SEEHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred EEEEeCC-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence 9999955 88999999875 5699999999999999999999999999999999999997 678999999999664321
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-----------CCCCChhHHHHHHHHHHHHHh
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----------AGHTSAVDWWALGILLYEMLY 866 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----------~~~~~k~DIWSLG~il~ell~ 866 (975)
.. .......+||+.|+|||++.+ ..++.++|||||||++|+|++
T Consensus 161 ~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~ 215 (343)
T 3dbq_A 161 TT-------------------------SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 215 (343)
T ss_dssp ----------------------------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHH
T ss_pred cc-------------------------cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHh
Confidence 10 011234579999999999965 668889999999999999999
Q ss_pred CCCCCCCCC-HHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 867 GYTPFRGKT-RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 867 G~~Pf~~~~-~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
|+.||.... ....+..+.........+...+..+.+||.+||+.||.+||| +.|+|+||||+.
T Consensus 216 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt----~~e~l~hp~~~~ 279 (343)
T 3dbq_A 216 GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRIS----IPELLAHPYVQI 279 (343)
T ss_dssp SSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCC----HHHHHTSHHHHS
T ss_pred CCCcchhhhhHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCC----HHHHHhCccccc
Confidence 999998743 344555565555444445556789999999999999999999 999999999974
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-37 Score=350.43 Aligned_cols=241 Identities=23% Similarity=0.364 Sum_probs=182.9
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc-----------------------ccc-------ccCCe
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----------------------NRN-------KTKTH 716 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~-----------------------~~~-------~~~~~ 716 (975)
..++|++.+.||+|+||.||+|.+..+|+.||||++...... ... ....+
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 100 (360)
T 3e3p_A 21 EMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIY 100 (360)
T ss_dssp HHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEE
T ss_pred hccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhcccccccccee
Confidence 467899999999999999999999999999999987543100 000 01234
Q ss_pred EEEEEeccCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHH--HCCCeecCCCCCCEEEec-CCcEEEeeccCC
Q 002051 717 VCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLH--CQGIIYRDLKPENVLLQG-NGHVSLTDFDLS 791 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qIl~aL~yLH--~~gIiHrDIKp~NILl~~-~g~vkL~DFG~a 791 (975)
+|+|||||++ +|...+.. .....+++..++.++.||+.||.||| ++||+||||||+|||++. ++.+||+|||++
T Consensus 101 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a 179 (360)
T 3e3p_A 101 LNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSA 179 (360)
T ss_dssp EEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTC
T ss_pred EEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCc
Confidence 8899999965 66555442 23467899999999999999999999 999999999999999996 899999999999
Q ss_pred CccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC-CCChhHHHHHHHHHHHHHhCCCC
Q 002051 792 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTP 870 (975)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~~~k~DIWSLG~il~ell~G~~P 870 (975)
...... .......||+.|+|||++.+.. ++.++|||||||++|+|++|+.|
T Consensus 180 ~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~p 231 (360)
T 3e3p_A 180 KKLSPS----------------------------EPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPI 231 (360)
T ss_dssp BCCCTT----------------------------SCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred eecCCC----------------------------CCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 654321 1123457899999999997654 89999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCCC------------------------------CCCCCCcHHHHHHHHHhcccCccccCCChh
Q 002051 871 FRGKTRQKTFANILHKDLKF------------------------------PSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 920 (975)
Q Consensus 871 f~~~~~~~~~~~i~~~~~~~------------------------------p~~~~~s~~~~~li~~~L~~dP~~R~t~~~ 920 (975)
|.+.+....+..+....... ......+..+.+||.+||++||.+|||
T Consensus 232 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt--- 308 (360)
T 3e3p_A 232 FRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMK--- 308 (360)
T ss_dssp SCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCC---
T ss_pred cCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCC---
Confidence 99988888777775421100 011225678999999999999999999
Q ss_pred hHHHHHcCCCccCCCcchhh
Q 002051 921 GANEIKKHPFFKGVNWALVR 940 (975)
Q Consensus 921 ~~~elL~Hp~f~~~~~~~~~ 940 (975)
+.|+|+||||+++......
T Consensus 309 -~~e~l~hp~f~~~~~~~~~ 327 (360)
T 3e3p_A 309 -PYEALCHPYFDELHDPATK 327 (360)
T ss_dssp -HHHHTTSGGGGGGGCTTCC
T ss_pred -HHHHhcCccccccCCcccc
Confidence 9999999999987665443
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=361.57 Aligned_cols=238 Identities=32% Similarity=0.505 Sum_probs=189.3
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc--------------------cc-----------cccCCe
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--------------------NR-----------NKTKTH 716 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~--------------------~~-----------~~~~~~ 716 (975)
.++|.+.+.||+|+||.||+|.+..+++.||||++.+.... .. ......
T Consensus 134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 213 (419)
T 3i6u_A 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 213 (419)
T ss_dssp HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESSE
T ss_pred hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecCc
Confidence 46899999999999999999999999999999998754211 00 013566
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC---cEEEeeccCCCc
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSCL 793 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g---~vkL~DFG~a~~ 793 (975)
+|+|||||++|+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++.
T Consensus 214 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~ 291 (419)
T 3i6u_A 214 YYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 291 (419)
T ss_dssp EEEEEECCTTCBGGGGTSSS--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTS
T ss_pred eEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeeccccee
Confidence 89999999999999988764 5699999999999999999999999999999999999997554 599999999966
Q ss_pred cCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC---CCCCChhHHHHHHHHHHHHHhCCCC
Q 002051 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTP 870 (975)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~---~~~~~k~DIWSLG~il~ell~G~~P 870 (975)
.... ......+||+.|+|||++.+ ..++.++|||||||++|+|++|.+|
T Consensus 292 ~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~p 343 (419)
T 3i6u_A 292 LGET----------------------------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343 (419)
T ss_dssp CC---------------------------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCS
T ss_pred cCCC----------------------------ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCC
Confidence 4311 11234679999999999864 5677899999999999999999999
Q ss_pred CCCCCHH-HHHHHHHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchh
Q 002051 871 FRGKTRQ-KTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 939 (975)
Q Consensus 871 f~~~~~~-~~~~~i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~ 939 (975)
|.+.... .....+......++.. ..++..+.+||.+||++||.+||| ++|+|+||||++.+|...
T Consensus 344 f~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~e~l~hp~~~~~~~~~~ 411 (419)
T 3i6u_A 344 FSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT----TEEALRHPWLQDEDMKRK 411 (419)
T ss_dssp SCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC----HHHHHHSGGGCCHHHHHH
T ss_pred CCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcC----HHHHhCCcccCChhHHHH
Confidence 9865433 3334444444443321 457899999999999999999999 999999999998887643
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=339.45 Aligned_cols=236 Identities=31% Similarity=0.521 Sum_probs=200.0
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh------------------------------ccccccCCeEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM------------------------------LNRNKTKTHVC 718 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~------------------------------~~~~~~~~~~~ 718 (975)
++|++++.||+|+||.||+|.+..+++.||+|++..... .........+|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 479999999999999999999999999999999865421 11112567899
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC----cEEEeeccCCCcc
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG----HVSLTDFDLSCLT 794 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g----~vkL~DFG~a~~~ 794 (975)
+||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||++...
T Consensus 85 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~ 162 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 162 (283)
T ss_dssp EEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEEeecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceec
Confidence 999999999999999764 5699999999999999999999999999999999999998877 7999999998654
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCC
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 874 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~ 874 (975)
... .......|++.|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus 163 ~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 214 (283)
T 3bhy_A 163 EAG----------------------------NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGE 214 (283)
T ss_dssp C------------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred cCC----------------------------CcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCc
Confidence 311 1112346899999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcch
Q 002051 875 TRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWAL 938 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~ 938 (975)
+....+..+......++.. ...+..+.+||.+||..||.+||| +.++++||||+.+.+..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~~l~h~~~~~~~~~~ 276 (283)
T 3bhy_A 215 TKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMT----IAQSLEHSWIKAIRRRN 276 (283)
T ss_dssp SHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCC----HHHHHHCHHHHHHHHCC
T ss_pred chHHHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcC----HHHHHhCHHHHHHHHHh
Confidence 8888888877765554422 457889999999999999999999 99999999999776553
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-37 Score=345.94 Aligned_cols=234 Identities=27% Similarity=0.482 Sum_probs=203.0
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEE
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCL 719 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~l 719 (975)
..++|.+.+.||+|+||.||+|.+..+++.||+|++.+... .....+..++|+
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 45689999999999999999999999999999999865421 112226778999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
|||||.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 119 v~e~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~- 195 (335)
T 2owb_A 119 VLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG- 195 (335)
T ss_dssp EECCCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT-
T ss_pred EEecCCCCCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc-
Confidence 99999999999998774 569999999999999999999999999999999999999999999999999986543111
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||......+.
T Consensus 196 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 249 (335)
T 2owb_A 196 --------------------------ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 249 (335)
T ss_dssp --------------------------CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred --------------------------ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHH
Confidence 112345799999999999999999999999999999999999999999888888
Q ss_pred HHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCC
Q 002051 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935 (975)
Q Consensus 880 ~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~ 935 (975)
+..+......++. .++..+.+||.+||+.||.+||| +.++|+||||++..
T Consensus 250 ~~~~~~~~~~~~~--~~~~~~~~li~~~l~~dp~~Rps----~~ell~~~~~~~~~ 299 (335)
T 2owb_A 250 YLRIKKNEYSIPK--HINPVAASLIQKMLQTDPTARPT----INELLNDEFFTSGY 299 (335)
T ss_dssp HHHHHHTCCCCCT--TSCHHHHHHHHHHTCSSGGGSCC----GGGGGGSHHHHTSC
T ss_pred HHHHhcCCCCCCc--cCCHHHHHHHHHHccCChhHCcC----HHHHhcCccccCCC
Confidence 8888777665554 47889999999999999999999 99999999998653
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-37 Score=346.15 Aligned_cols=229 Identities=26% Similarity=0.378 Sum_probs=196.2
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch---------------------------hccccccCCeEEEEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV---------------------------MLNRNKTKTHVCLIT 721 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~---------------------------~~~~~~~~~~~~lV~ 721 (975)
+.|++++.||+|+||.||+|++..+++.||||++.... +.........+||||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 45999999999999999999999999999999986421 111122567899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
|||. |+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 134 e~~~-g~l~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~------ 205 (348)
T 1u5q_A 134 EYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA------ 205 (348)
T ss_dssp ECCS-EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS------
T ss_pred ecCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecC------
Confidence 9995 6888888643 3569999999999999999999999999999999999999999999999999985432
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhc---CCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~ 878 (975)
.....+||+.|+|||++. +..++.++|||||||++|+|++|..||.+.+...
T Consensus 206 -------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 260 (348)
T 1u5q_A 206 -------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 260 (348)
T ss_dssp -------------------------SBCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred -------------------------CCCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 112457999999999985 5678999999999999999999999999988888
Q ss_pred HHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 879 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 879 ~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
.+..+............++..+.+||.+||+.||.+||| ++++++||||...
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~~ll~h~~~~~~ 312 (348)
T 1u5q_A 261 ALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT----SEVLLKHRFVLRE 312 (348)
T ss_dssp HHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHTTCHHHHSC
T ss_pred HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcC----HHHHhhChhhhcc
Confidence 888777766555455668899999999999999999999 9999999999654
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-37 Score=335.44 Aligned_cols=234 Identities=29% Similarity=0.483 Sum_probs=193.2
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCe
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTH 716 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~ 716 (975)
..+..++|++.+.||+|+||.||+|.+..+|+.||||++..... .........
T Consensus 6 g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 85 (276)
T 2h6d_A 6 GRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTD 85 (276)
T ss_dssp -CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred CcceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCe
Confidence 34567899999999999999999999999999999999865321 111225678
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
+|+||||+++++|.+++... ..+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||++.....
T Consensus 86 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 86 FFMVMEYVSGGELFDYICKH--GRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp EEEEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred EEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 99999999999999999774 4589999999999999999999999999999999999999999999999999865431
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCC-CChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
. .......|++.|+|||++.+..+ +.++|||||||++|+|++|..||...+
T Consensus 164 ~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 215 (276)
T 2h6d_A 164 G----------------------------EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH 215 (276)
T ss_dssp -----------------------------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred C----------------------------cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc
Confidence 1 01123468999999999988765 579999999999999999999999988
Q ss_pred HHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 876 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 876 ~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
....+..+......+|. .++..+.+||.+||+.||.+||| +.++++||||+.
T Consensus 216 ~~~~~~~~~~~~~~~~~--~~~~~l~~li~~~l~~~p~~Rps----~~~~l~h~~~~~ 267 (276)
T 2h6d_A 216 VPTLFKKIRGGVFYIPE--YLNRSVATLLMHMLQVDPLKRAT----IKDIREHEWFKQ 267 (276)
T ss_dssp HHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSGGGSCC----HHHHHHSHHHHT
T ss_pred HHHHHHHhhcCcccCch--hcCHHHHHHHHHHccCChhhCCC----HHHHHhChhhcc
Confidence 88888777776655543 46889999999999999999999 999999999975
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-37 Score=336.69 Aligned_cols=232 Identities=21% Similarity=0.323 Sum_probs=190.0
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc--------------------------c----ccccCC
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--------------------------N----RNKTKT 715 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~--------------------------~----~~~~~~ 715 (975)
.....|++.+.||+|+||.||+|.+..++..||+|++...... . ......
T Consensus 23 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 102 (290)
T 1t4h_A 23 NDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKK 102 (290)
T ss_dssp TTSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCE
T ss_pred cCceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCc
Confidence 3455689999999999999999999999999999998643210 0 011346
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEEe-cCCcEEEeeccCCC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQ-GNGHVSLTDFDLSC 792 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~g--IiHrDIKp~NILl~-~~g~vkL~DFG~a~ 792 (975)
++|+|||||++++|.+++... ..+++..++.++.||+.||.|||++| |+||||||+|||++ .++.+||+|||++.
T Consensus 103 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~ 180 (290)
T 1t4h_A 103 CIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred eEEEEEEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence 789999999999999999874 56999999999999999999999999 99999999999998 78899999999985
Q ss_pred ccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCC
Q 002051 793 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 872 (975)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~ 872 (975)
.... .......||+.|+|||++.+ .++.++|||||||++|+|++|..||.
T Consensus 181 ~~~~-----------------------------~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~ 230 (290)
T 1t4h_A 181 LKRA-----------------------------SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYS 230 (290)
T ss_dssp GCCT-----------------------------TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred cccc-----------------------------cccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCC
Confidence 4321 11224578999999998875 48999999999999999999999998
Q ss_pred CCCHHHHHHH-HHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 873 GKTRQKTFAN-ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 873 ~~~~~~~~~~-i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
.......... +.............++.+.+||.+||+.||.+||| +.++|+||||++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~h~~f~~ 288 (290)
T 1t4h_A 231 ECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYS----IKDLLNHAFFQE 288 (290)
T ss_dssp TCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCC----HHHHHTSGGGC-
T ss_pred CcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCC----HHHHhhCccccc
Confidence 8555444444 43333332333456789999999999999999999 999999999986
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-37 Score=345.64 Aligned_cols=247 Identities=23% Similarity=0.358 Sum_probs=194.2
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-------------------------hcc-----ccccCCeE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------------------MLN-----RNKTKTHV 717 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------------------~~~-----~~~~~~~~ 717 (975)
.++|++.+.||+|+||.||+|.+..+|+.||||++.... +.. .......+
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 468999999999999999999999999999999986321 000 01123678
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|+||||+. ++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 90 ~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDES 165 (353)
T ss_dssp EEEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccccc
Confidence 99999995 699999986 46999999999999999999999999999999999999999999999999999765422
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 876 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~ 876 (975)
...... ...........+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+.
T Consensus 166 ~~~~~~-----------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 228 (353)
T 2b9h_A 166 AADNSE-----------------PTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY 228 (353)
T ss_dssp -------------------------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred cccccC-----------------ccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCc
Confidence 111000 0000112234689999999998865 6788999999999999999999999999887
Q ss_pred HHHHHHHHhcCC------------------------CCCC------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 877 QKTFANILHKDL------------------------KFPS------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 877 ~~~~~~i~~~~~------------------------~~p~------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
...+..+..... ..+. ...++..+.+||.+||+.||.+||| +.++|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell 304 (353)
T 2b9h_A 229 RHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRIT----AKEAL 304 (353)
T ss_dssp HHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCC----HHHHH
T ss_pred HHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCC----HHHHh
Confidence 766655443100 0010 1357889999999999999999999 99999
Q ss_pred cCCCccCCCcchh
Q 002051 927 KHPFFKGVNWALV 939 (975)
Q Consensus 927 ~Hp~f~~~~~~~~ 939 (975)
+||||+...+...
T Consensus 305 ~hp~~~~~~~~~~ 317 (353)
T 2b9h_A 305 EHPYLQTYHDPND 317 (353)
T ss_dssp TSGGGTTTCCTTS
T ss_pred cCccccccCCccc
Confidence 9999999887654
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=345.30 Aligned_cols=236 Identities=21% Similarity=0.350 Sum_probs=191.2
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhcc---------------c------------cc----cCCe
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN---------------R------------NK----TKTH 716 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~---------------~------------~~----~~~~ 716 (975)
.++|++++.||+|+||.||+|++..+++.||||++....... . .. ....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 578999999999999999999999999999999986542110 0 00 1124
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
+|+|||||+|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 168 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD 168 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred cEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence 59999999999999999864 5699999999999999999999999999999999999999999999999999965432
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 876 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~ 876 (975)
... ........+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.
T Consensus 169 ~~~------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~ 224 (311)
T 3ork_A 169 SGN------------------------SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224 (311)
T ss_dssp -------------------------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccc------------------------ccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh
Confidence 110 01122345799999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHhcCCCCCC--CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 877 QKTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 877 ~~~~~~i~~~~~~~p~--~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
......+.......+. ...++..+.+||.+||+.||.+||+ ..+++.|+|++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~----~~~~l~~~l~~~ 279 (311)
T 3ork_A 225 VSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQ----TAAEMRADLVRV 279 (311)
T ss_dssp HHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCS----SHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChh----hHHHHHHHHHHH
Confidence 8887777766544332 2457889999999999999999999 888999999863
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-38 Score=351.55 Aligned_cols=234 Identities=29% Similarity=0.434 Sum_probs=169.1
Q ss_pred cCCCccccc-ccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------ccccc----cCCeEEEEE
Q 002051 667 NLQHFRPIK-PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------LNRNK----TKTHVCLIT 721 (975)
Q Consensus 667 ~~~~y~i~~-~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------~~~~~----~~~~~~lV~ 721 (975)
..++|.+++ .||+|+||.||+|.++.+|+.||||++..... ..... ...++||||
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~ 105 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIM 105 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEE
Confidence 356899976 59999999999999999999999999865421 11111 245689999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec---CCcEEEeeccCCCccCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~---~g~vkL~DFG~a~~~~~~~ 798 (975)
|||+||+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++.....
T Consensus 106 e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~-- 183 (336)
T 3fhr_A 106 ECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ-- 183 (336)
T ss_dssp ECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC----
T ss_pred eccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceeccc--
Confidence 9999999999998866567999999999999999999999999999999999999986 44599999999854321
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~ 878 (975)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.....
T Consensus 184 ---------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 236 (336)
T 3fhr_A 184 ---------------------------NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQA 236 (336)
T ss_dssp -----------------------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------
T ss_pred ---------------------------cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchh
Confidence 11224578999999999988889999999999999999999999998765544
Q ss_pred HH----HHHHhcCC--CCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 879 TF----ANILHKDL--KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 879 ~~----~~i~~~~~--~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
.. ..+..... ..+....++..+.+||.+||..||.+||| +.|+|+||||++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~hp~~~~ 293 (336)
T 3fhr_A 237 ISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLT----ITQFMNHPWINQ 293 (336)
T ss_dssp --------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCC----HHHHHHSHHHHT
T ss_pred hhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcC----HHHHhcCccccc
Confidence 32 22222222 23333568999999999999999999999 999999999986
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-37 Score=352.61 Aligned_cols=235 Identities=24% Similarity=0.392 Sum_probs=189.8
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh----------------------------ccccccCCeE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM----------------------------LNRNKTKTHV 717 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~----------------------------~~~~~~~~~~ 717 (975)
+...+|++++.||+|+||.||+|.+.. ++.||||++..... ........++
T Consensus 53 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~ 131 (390)
T 2zmd_A 53 VKGRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI 131 (390)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred ccCCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEE
Confidence 345679999999999999999999865 89999999864310 1112256778
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|||||+ .+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||+++.+...
T Consensus 132 ~lv~E~-~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~ 207 (390)
T 2zmd_A 132 YMVMEC-GNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 207 (390)
T ss_dssp EEEEEC-CSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC---
T ss_pred EEEEec-CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCC
Confidence 999995 588999999875 4689999999999999999999999999999999999995 689999999999764321
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-----------CCCCChhHHHHHHHHHHHHHh
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----------AGHTSAVDWWALGILLYEMLY 866 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----------~~~~~k~DIWSLG~il~ell~ 866 (975)
.. .......+||+.|+|||++.+ ..++.++|||||||++|+|++
T Consensus 208 ~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~ 262 (390)
T 2zmd_A 208 TT-------------------------SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 262 (390)
T ss_dssp -------------------------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHH
T ss_pred Cc-------------------------cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHH
Confidence 10 011234579999999999976 368889999999999999999
Q ss_pred CCCCCCCCC-HHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 867 GYTPFRGKT-RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 867 G~~Pf~~~~-~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
|..||.... ....+..++.....++.+...+..+.+||.+||+.||.+||| +.|+|+||||+..
T Consensus 263 G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~ell~hp~~~~~ 327 (390)
T 2zmd_A 263 GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRIS----IPELLAHPYVQIQ 327 (390)
T ss_dssp SSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCC----HHHHHTSHHHHSC
T ss_pred CCCcchhhhHHHHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCC----HHHHhhCcCcccc
Confidence 999998753 345566666665555555556889999999999999999999 9999999999754
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=363.91 Aligned_cols=236 Identities=22% Similarity=0.285 Sum_probs=186.5
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------hcccccc----------------
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------MLNRNKT---------------- 713 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------~~~~~~~---------------- 713 (975)
..+|++++.||+|+||.||+|.+..+|+.||||++.... .+.....
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 345999999999999999999999999999999987632 1110000
Q ss_pred -------------------CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHH------HHHHHHHHHHHHHHHHCCCeec
Q 002051 714 -------------------KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAV------RFYAAEVVVALEYLHCQGIIYR 768 (975)
Q Consensus 714 -------------------~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i------~~i~~qIl~aL~yLH~~gIiHr 768 (975)
..++|||||||+ |+|.+++.... ..++.... ..++.||+.||+|||++||+||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHr 218 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHG 218 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEET
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccC
Confidence 034899999997 89999998632 23444444 5677999999999999999999
Q ss_pred CCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC--C
Q 002051 769 DLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--A 846 (975)
Q Consensus 769 DIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~ 846 (975)
||||+|||++.++.+||+|||+|+.... ......||+.|+|||++.+ .
T Consensus 219 Dikp~NIll~~~~~~kL~DFG~a~~~~~------------------------------~~~~~~~t~~y~aPE~~~~~~~ 268 (371)
T 3q60_A 219 HFTPDNLFIMPDGRLMLGDVSALWKVGT------------------------------RGPASSVPVTYAPREFLNASTA 268 (371)
T ss_dssp TCSGGGEEECTTSCEEECCGGGEEETTC------------------------------EEEGGGSCGGGCCHHHHTCSEE
T ss_pred cCCHHHEEECCCCCEEEEecceeeecCC------------------------------CccCccCCcCCcChhhccCCCC
Confidence 9999999999999999999999865321 0113456799999999987 6
Q ss_pred CCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH--HH-----HHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh
Q 002051 847 GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT--FA-----NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH 919 (975)
Q Consensus 847 ~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~--~~-----~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~ 919 (975)
.++.++|||||||++|+|++|+.||.+...... +. ........++....++..+.+||.+||++||++|||
T Consensus 269 ~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-- 346 (371)
T 3q60_A 269 TFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLL-- 346 (371)
T ss_dssp ECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCC--
T ss_pred CcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCC--
Confidence 789999999999999999999999987643210 00 001123334444578999999999999999999999
Q ss_pred hhHHHHHcCCCccCCCcchh
Q 002051 920 EGANEIKKHPFFKGVNWALV 939 (975)
Q Consensus 920 ~~~~elL~Hp~f~~~~~~~~ 939 (975)
+.++|+||||++++|...
T Consensus 347 --~~e~l~hp~f~~~~~~~~ 364 (371)
T 3q60_A 347 --PLEAMETPEFLQLQNEIS 364 (371)
T ss_dssp --HHHHTTSHHHHHHHHHHH
T ss_pred --HHHHhcCHHHHHHHHHHh
Confidence 999999999999888654
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=338.91 Aligned_cols=238 Identities=26% Similarity=0.437 Sum_probs=198.5
Q ss_pred CCCcccccccccCCceEEEEEEEe-CCCeEEEEEEeccchh--------------c---------------ccc-----c
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELC-GSGQYFAMKAMDKGVM--------------L---------------NRN-----K 712 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~-~t~~~vAiK~l~~~~~--------------~---------------~~~-----~ 712 (975)
.++|++++.||+|+||.||+|.+. .+|+.||+|++..... + ... .
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~ 89 (326)
T 1blx_A 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 89 (326)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccC
Confidence 468999999999999999999995 6789999998864210 0 000 1
Q ss_pred cCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCC
Q 002051 713 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 792 (975)
Q Consensus 713 ~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~ 792 (975)
....+|+||||+. |+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 90 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~ 168 (326)
T 1blx_A 90 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 168 (326)
T ss_dssp SEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred CCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcccc
Confidence 3457899999996 699999988666679999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCC
Q 002051 793 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 872 (975)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~ 872 (975)
..... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus 169 ~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 220 (326)
T 1blx_A 169 IYSFQ----------------------------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFR 220 (326)
T ss_dssp CCCGG----------------------------GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred cccCC----------------------------CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCC
Confidence 54311 11234578999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCC-----CCC--------------------CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 873 GKTRQKTFANILHKDL-----KFP--------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 873 ~~~~~~~~~~i~~~~~-----~~p--------------------~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
+.+....+..+..... .++ ....++..+.+||.+||..||.+||| +.++|+
T Consensus 221 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e~l~ 296 (326)
T 1blx_A 221 GSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS----AYSALS 296 (326)
T ss_dssp CSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCC----HHHHHT
T ss_pred CCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCC----HHHHhc
Confidence 9888887777764210 000 11347889999999999999999999 999999
Q ss_pred CCCccCCCcch
Q 002051 928 HPFFKGVNWAL 938 (975)
Q Consensus 928 Hp~f~~~~~~~ 938 (975)
||||+++++..
T Consensus 297 hp~~~~~~~~~ 307 (326)
T 1blx_A 297 HPYFQDLERCK 307 (326)
T ss_dssp SGGGTTCCCCC
T ss_pred Cccccccchhh
Confidence 99999987753
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-37 Score=339.01 Aligned_cols=249 Identities=25% Similarity=0.394 Sum_probs=183.6
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-------------------------hccccccCCeEE
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------------------MLNRNKTKTHVC 718 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------------------~~~~~~~~~~~~ 718 (975)
+.+..++|++.+.||+|+||.||+|.+..+++.||||++.... +.........+|
T Consensus 10 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 89 (303)
T 2vwi_A 10 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW 89 (303)
T ss_dssp ---CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEE
T ss_pred cccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcE
Confidence 4567889999999999999999999999999999999876431 011122567889
Q ss_pred EEEeccCCCCHHHHHhh------CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCC
Q 002051 719 LITDYCPGGELFLLLDR------QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 792 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~------~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~ 792 (975)
+||||++|++|.+++.. .....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp EEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred EEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 99999999999999874 124569999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCC
Q 002051 793 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPF 871 (975)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf 871 (975)
........ ..........||+.|+|||++.+ ..++.++|||||||++|+|++|..||
T Consensus 170 ~~~~~~~~----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf 227 (303)
T 2vwi_A 170 FLATGGDI----------------------TRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 227 (303)
T ss_dssp HCC-------------------------------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred eeccCCCc----------------------cchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 54321100 00112234579999999999976 56899999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCCCCC--------CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcch
Q 002051 872 RGKTRQKTFANILHKDLKFP--------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWAL 938 (975)
Q Consensus 872 ~~~~~~~~~~~i~~~~~~~p--------~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~ 938 (975)
........+........... ....++..+.+||.+||+.||.+||| +.++++||||+...+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~ll~h~~~~~~~~~~ 298 (303)
T 2vwi_A 228 HKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT----AAELLRHKFFQKAKNKE 298 (303)
T ss_dssp TTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCC----HHHHHTSTTC-------
T ss_pred ccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcC----HHHHhhChhhhcCCCCc
Confidence 98777666655554332211 12356889999999999999999999 99999999999876654
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=347.60 Aligned_cols=233 Identities=26% Similarity=0.414 Sum_probs=189.9
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCC------
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKT------ 715 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~------ 715 (975)
.++|.+.+.||+|+||.||+|.+..+|+.||||++..... ........
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 4689999999999999999999999999999999875310 01111222
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
.+|+||||+. ++|.+++. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 121 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp CCEEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred eEEEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 3499999995 68988874 349999999999999999999999999999999999999999999999999986432
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 874 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~ 874 (975)
. .....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.
T Consensus 196 ~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 245 (371)
T 4exu_A 196 A------------------------------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 245 (371)
T ss_dssp ----------------------------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred c------------------------------CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence 1 1224578999999999987 67899999999999999999999999998
Q ss_pred CHHHHHHHHHhcCCC-----------------------CCC------CCCCcHHHHHHHHHhcccCccccCCChhhHHHH
Q 002051 875 TRQKTFANILHKDLK-----------------------FPS------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 925 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~-----------------------~p~------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~el 925 (975)
+..+.+..+...... .+. ...++..+.+||.+||++||.+||| +.|+
T Consensus 246 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~el 321 (371)
T 4exu_A 246 DYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLT----AAQA 321 (371)
T ss_dssp SHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCC----HHHH
T ss_pred ChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCC----HHHH
Confidence 888777776541110 000 1346889999999999999999999 9999
Q ss_pred HcCCCccCCCcchh
Q 002051 926 KKHPFFKGVNWALV 939 (975)
Q Consensus 926 L~Hp~f~~~~~~~~ 939 (975)
|+||||+.+.....
T Consensus 322 l~hp~f~~~~~~~~ 335 (371)
T 4exu_A 322 LTHPFFEPFRDPEE 335 (371)
T ss_dssp HTSGGGTTTCCGGG
T ss_pred hcCcccccCCCccc
Confidence 99999998766544
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-37 Score=336.60 Aligned_cols=235 Identities=27% Similarity=0.477 Sum_probs=202.5
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEE
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCL 719 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~l 719 (975)
..++|.+.+.||+|+||.||+|.+..+++.||+|++.+... .......+.+|+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (294)
T 2rku_A 13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 92 (294)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence 45689999999999999999999999999999999865421 112226778999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 93 v~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~- 169 (294)
T 2rku_A 93 VLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG- 169 (294)
T ss_dssp EEECCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT-
T ss_pred EEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCc-
Confidence 99999999999998774 469999999999999999999999999999999999999999999999999986543111
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||......+.
T Consensus 170 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~ 223 (294)
T 2rku_A 170 --------------------------ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 223 (294)
T ss_dssp --------------------------CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred --------------------------cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 112345789999999999999899999999999999999999999999888888
Q ss_pred HHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCc
Q 002051 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936 (975)
Q Consensus 880 ~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~ 936 (975)
+..+......++. .++..+.+||.+||+.||.+||| ++++++||||++...
T Consensus 224 ~~~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~Rps----~~~ll~~~~~~~~~~ 274 (294)
T 2rku_A 224 YLRIKKNEYSIPK--HINPVAASLIQKMLQTDPTARPT----INELLNDEFFTSGYI 274 (294)
T ss_dssp HHHHHTTCCCCCT--TSCHHHHHHHHHHTCSSGGGSCC----GGGGGGSHHHHTSCC
T ss_pred HHHHhhccCCCcc--ccCHHHHHHHHHHcccChhhCcC----HHHHhhChheecCCc
Confidence 8777776655543 57889999999999999999999 999999999986543
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=347.92 Aligned_cols=239 Identities=27% Similarity=0.384 Sum_probs=194.3
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------------------hccccccCCeEEEE
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------------------MLNRNKTKTHVCLI 720 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------------~~~~~~~~~~~~lV 720 (975)
..++|++++.||+|+||.||+|++..+|+.||||++.... +.........+|+|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 5678999999999999999999999999999999875431 11222367789999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 800 (975)
|||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 103 ~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 178 (331)
T 4aaa_A 103 FEFVDHTILDDLELFP--NGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG-- 178 (331)
T ss_dssp EECCSEEHHHHHHHST--TCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred EecCCcchHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCc--
Confidence 9999998888887653 469999999999999999999999999999999999999999999999999986543111
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
.......||+.|+|||++.+. .++.++|||||||++|+|++|.+||.+.+..+.
T Consensus 179 -------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 233 (331)
T 4aaa_A 179 -------------------------EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ 233 (331)
T ss_dssp ------------------------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred -------------------------cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHH
Confidence 112245789999999999875 689999999999999999999999999888777
Q ss_pred HHHHHhc-------------------CCCCCC----------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCC
Q 002051 880 FANILHK-------------------DLKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930 (975)
Q Consensus 880 ~~~i~~~-------------------~~~~p~----------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~ 930 (975)
+..+... ....+. ...++..+.+||.+||++||.+||| +.|+|+|||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt----~~ell~hp~ 309 (331)
T 4aaa_A 234 LYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPF----CAELLHHDF 309 (331)
T ss_dssp HHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCC----GGGGGGSHH
T ss_pred HHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCC----HHHHhcCch
Confidence 6665431 111111 1246889999999999999999999 999999999
Q ss_pred ccCCCcch
Q 002051 931 FKGVNWAL 938 (975)
Q Consensus 931 f~~~~~~~ 938 (975)
|+...+..
T Consensus 310 f~~~~~~~ 317 (331)
T 4aaa_A 310 FQMDGFAE 317 (331)
T ss_dssp HHGGGHHH
T ss_pred hccCChhh
Confidence 99876653
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-37 Score=346.98 Aligned_cols=242 Identities=26% Similarity=0.467 Sum_probs=204.7
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc------------------------------------
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML------------------------------------ 708 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~------------------------------------ 708 (975)
.+..++|++++.||+|+||.||+|.+ +++.||||++......
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 104 (348)
T 2pml_X 27 DKYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEY 104 (348)
T ss_dssp CEEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTT
T ss_pred ccccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCC
Confidence 34568999999999999999999999 8999999998654211
Q ss_pred -----cccccCCeEEEEEeccCCCCHHHH------HhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEE
Q 002051 709 -----NRNKTKTHVCLITDYCPGGELFLL------LDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVL 776 (975)
Q Consensus 709 -----~~~~~~~~~~lV~Ey~~ggsL~~~------l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~-~gIiHrDIKp~NIL 776 (975)
........+|+|||||++++|.++ +.......+++..++.++.||+.||.|||+ +||+||||||+|||
T Consensus 105 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil 184 (348)
T 2pml_X 105 CLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNIL 184 (348)
T ss_dssp BCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEE
T ss_pred cceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEE
Confidence 111256789999999999999998 655445779999999999999999999999 99999999999999
Q ss_pred EecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCC-hhHH
Q 002051 777 LQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTS-AVDW 854 (975)
Q Consensus 777 l~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~-k~DI 854 (975)
++.++.+||+|||++...... ......||+.|+|||++.+. .++. ++||
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~-----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di 235 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK-----------------------------KIKGSRGTYEFMPPEFFSNESSYNGAKVDI 235 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT-----------------------------EECSSCSCGGGCCGGGGSSCCCEEHHHHHH
T ss_pred EcCCCcEEEeccccccccccc-----------------------------cccCCCCCcCccCchhhcCCCCCCcchhhH
Confidence 999999999999998653211 12345789999999999887 5666 9999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhcCCCCCCC-----------------CCCcHHHHHHHHHhcccCccccC
Q 002051 855 WALGILLYEMLYGYTPFRGKTR-QKTFANILHKDLKFPSS-----------------TPTSLHAKQLMYRLLHRDPKSRL 916 (975)
Q Consensus 855 WSLG~il~ell~G~~Pf~~~~~-~~~~~~i~~~~~~~p~~-----------------~~~s~~~~~li~~~L~~dP~~R~ 916 (975)
|||||++|+|++|..||.+.+. ...+..+......+|.. ..++..+.+||.+||+.||.+||
T Consensus 236 ~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 315 (348)
T 2pml_X 236 WSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERI 315 (348)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSC
T ss_pred HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCC
Confidence 9999999999999999998776 77777777766666532 45789999999999999999999
Q ss_pred CChhhHHHHHcCCCccCCCcchhhc
Q 002051 917 GSHEGANEIKKHPFFKGVNWALVRC 941 (975)
Q Consensus 917 t~~~~~~elL~Hp~f~~~~~~~~~~ 941 (975)
| +.++++||||++.+|..+..
T Consensus 316 s----~~e~l~hp~f~~~~~~~~~~ 336 (348)
T 2pml_X 316 T----SEDALKHEWLADTNIEDLRE 336 (348)
T ss_dssp C----HHHHHTSGGGTTCCHHHHHH
T ss_pred C----HHHHhcCccccCCCHHHHHH
Confidence 9 99999999999999986643
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-37 Score=335.11 Aligned_cols=235 Identities=26% Similarity=0.450 Sum_probs=193.7
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-------------------------ccccccCCeEEEEEec
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-------------------------LNRNKTKTHVCLITDY 723 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-------------------------~~~~~~~~~~~lV~Ey 723 (975)
++|++++.||+|+||.||+|.+..+++.||+|++..... ..........|+||||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 579999999999999999999999999999999864321 1112256788999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||.+.......
T Consensus 87 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~----- 159 (276)
T 2yex_A 87 CSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN----- 159 (276)
T ss_dssp CTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETT-----
T ss_pred cCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCc-----
Confidence 9999999998653 569999999999999999999999999999999999999999999999999986543110
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCC-CChhHHHHHHHHHHHHHhCCCCCCCCCHH-HHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQ-KTFA 881 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-~~k~DIWSLG~il~ell~G~~Pf~~~~~~-~~~~ 881 (975)
.........||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.... ..+.
T Consensus 160 --------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 219 (276)
T 2yex_A 160 --------------------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219 (276)
T ss_dssp --------------------EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHH
T ss_pred --------------------chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHH
Confidence 0011234578999999999987765 67899999999999999999999876543 2333
Q ss_pred HHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 882 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 882 ~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
.+.......+....++..+.+||.+||..||.+||| +.++++||||+..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~~~~~~~~ 268 (276)
T 2yex_A 220 DWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT----IPDIKKDRWYNKP 268 (276)
T ss_dssp HHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCC----HHHHTTCTTTTCC
T ss_pred HhhhcccccCchhhcCHHHHHHHHHHCCCCchhCCC----HHHHhcCccccCh
Confidence 444443334444567899999999999999999999 9999999999865
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-37 Score=337.61 Aligned_cols=240 Identities=25% Similarity=0.428 Sum_probs=197.1
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEEe
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITD 722 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~E 722 (975)
..++|++++.||+|+||.||+|.+..+++.||+|++.... +.........+|+|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 3568999999999999999999999999999999986431 1112225678999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
||++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 97 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~------ 169 (302)
T 2j7t_A 97 FCPGGAVDAIMLEL-DRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK------ 169 (302)
T ss_dssp CCTTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHH------
T ss_pred eCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccc------
Confidence 99999999998753 24599999999999999999999999999999999999999999999999998743110
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhh-----cCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII-----AGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l-----~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
.........||+.|+|||++ .+..++.++|||||||++|+|++|..||...+..
T Consensus 170 ---------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 228 (302)
T 2j7t_A 170 ---------------------TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM 228 (302)
T ss_dssp ---------------------HHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH
T ss_pred ---------------------cccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH
Confidence 00112345789999999998 4677889999999999999999999999998888
Q ss_pred HHHHHHHhcCCC-CCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcch
Q 002051 878 KTFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWAL 938 (975)
Q Consensus 878 ~~~~~i~~~~~~-~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~ 938 (975)
..+..+...... ......++..+.+||.+||..||.+||| +.++++||||+++.+..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~h~~~~~~~~~~ 286 (302)
T 2j7t_A 229 RVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPS----AAQLLEHPFVSSITSNK 286 (302)
T ss_dssp HHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCC----HHHHTTSTTTTTCCCCH
T ss_pred HHHHHHhccCCcccCCccccCHHHHHHHHHHcccChhhCCC----HHHHhcChHHhhhccch
Confidence 777777665433 2233557889999999999999999999 99999999999988764
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=336.88 Aligned_cols=242 Identities=26% Similarity=0.410 Sum_probs=196.5
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch----------------------hccccccCCeEEEEEec
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV----------------------MLNRNKTKTHVCLITDY 723 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~----------------------~~~~~~~~~~~~lV~Ey 723 (975)
...++|++++.||+|+||.||+|.+..+|+.||||++.... +.........+|+||||
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 105 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence 34678999999999999999999999999999999986532 11122256788999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
|++++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||++......
T Consensus 106 ~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~------ 178 (314)
T 3com_A 106 CGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT------ 178 (314)
T ss_dssp CTTEEHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTT------
T ss_pred CCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhh------
Confidence 9999999999742 356999999999999999999999999999999999999999999999999998654311
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i 883 (975)
........||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+
T Consensus 179 ---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~ 237 (314)
T 3com_A 179 ---------------------MAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMI 237 (314)
T ss_dssp ---------------------BSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred ---------------------ccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 11123457899999999999999999999999999999999999999988776666555
Q ss_pred HhcCC-CCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchh
Q 002051 884 LHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 939 (975)
Q Consensus 884 ~~~~~-~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~ 939 (975)
..... .+.....++..+.+||.+||..||.+||| +.++++||||++.++...
T Consensus 238 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt----~~~ll~~~~~~~~~~~~~ 290 (314)
T 3com_A 238 PTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRAT----ATQLLQHPFVRSAKGVSI 290 (314)
T ss_dssp HHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCC----HHHHTTSHHHHTCCCGGG
T ss_pred hcCCCcccCCcccCCHHHHHHHHHHccCChhhCcC----HHHHHhCHHHhcCCcchH
Confidence 44332 23333457889999999999999999999 999999999998876543
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-37 Score=342.79 Aligned_cols=244 Identities=23% Similarity=0.381 Sum_probs=183.5
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-------------h------------cccc-----------
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------M------------LNRN----------- 711 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------~------------~~~~----------- 711 (975)
.++|++++.||+|+||.||+|+++.+|+.||||++.... + +...
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 357999999999999999999999999999999986321 0 0000
Q ss_pred ----------------------------------------------ccCCeEEEEEeccCCCCHHHHHhhCCC-CCCCHH
Q 002051 712 ----------------------------------------------KTKTHVCLITDYCPGGELFLLLDRQPT-KVLKED 744 (975)
Q Consensus 712 ----------------------------------------------~~~~~~~lV~Ey~~ggsL~~~l~~~~~-~~l~~~ 744 (975)
....++|+|||||+|++|.+++..... ...++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 012248999999999999999987432 235666
Q ss_pred HHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCccccccc
Q 002051 745 AVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEP 824 (975)
Q Consensus 745 ~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (975)
.++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++............ .....
T Consensus 165 ~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~---------------~~~~~ 229 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL---------------TPMPA 229 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC---------------------------
T ss_pred HHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhcccc---------------ccccc
Confidence 789999999999999999999999999999999999999999999997654321110000 00001
Q ss_pred ccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCC-CCCCcHHHHHH
Q 002051 825 MRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPS-STPTSLHAKQL 903 (975)
Q Consensus 825 ~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~-~~~~s~~~~~l 903 (975)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..|+.. .......+... .++. ....++.+.+|
T Consensus 230 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~l 305 (332)
T 3qd2_B 230 YATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME--RVRIITDVRNL--KFPLLFTQKYPQEHMM 305 (332)
T ss_dssp --CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH--HHHHHHHHHTT--CCCHHHHHHCHHHHHH
T ss_pred cccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH--HHHHHHHhhcc--CCCcccccCChhHHHH
Confidence 1223456899999999999999999999999999999999998877532 22222333332 2221 12346788999
Q ss_pred HHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 904 MYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 904 i~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
|.+||++||.+||| +.|+|+||||+++
T Consensus 306 i~~~l~~~p~~Rps----~~~~l~~~~f~~~ 332 (332)
T 3qd2_B 306 VQDMLSPSPTERPE----ATDIIENAIFENL 332 (332)
T ss_dssp HHHHHCSSGGGSCC----HHHHHHSTTCCCC
T ss_pred HHHHccCCCCcCCC----HHHHhhchhhhcC
Confidence 99999999999999 9999999999875
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-37 Score=347.54 Aligned_cols=237 Identities=23% Similarity=0.391 Sum_probs=187.7
Q ss_pred cccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------c-------------------
Q 002051 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------L------------------- 708 (975)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------~------------------- 708 (975)
+..+..++|++++.||+|+||.||+|.+..+++.||||++..... .
T Consensus 13 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~ 92 (373)
T 1q8y_A 13 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLL 92 (373)
T ss_dssp TCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCC
T ss_pred CCcccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHH
Confidence 345667899999999999999999999999999999999874310 0
Q ss_pred cccc----cCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecC---
Q 002051 709 NRNK----TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGN--- 780 (975)
Q Consensus 709 ~~~~----~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~-gIiHrDIKp~NILl~~~--- 780 (975)
.... ...++|+||||+ +++|.+++.......+++..++.++.||+.||.|||++ ||+||||||+|||++.+
T Consensus 93 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~ 171 (373)
T 1q8y_A 93 DHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSP 171 (373)
T ss_dssp EEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETT
T ss_pred HHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCC
Confidence 0000 123789999999 99999999886666799999999999999999999998 99999999999999543
Q ss_pred ---CcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHH
Q 002051 781 ---GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWAL 857 (975)
Q Consensus 781 ---g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSL 857 (975)
+.+||+|||++..... .....+||+.|+|||++.+..++.++|||||
T Consensus 172 ~~~~~~kl~Dfg~a~~~~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~sl 221 (373)
T 1q8y_A 172 ENLIQIKIADLGNACWYDE------------------------------HYTNSIQTREYRSPEVLLGAPWGCGADIWST 221 (373)
T ss_dssp TTEEEEEECCCTTCEETTB------------------------------CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHH
T ss_pred cCcceEEEcccccccccCC------------------------------CCCCCCCCccccCcHHHhCCCCCchHhHHHH
Confidence 3799999999865431 1123478999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCC------HHHHHHHHHhcCCCC----------------------------------------C
Q 002051 858 GILLYEMLYGYTPFRGKT------RQKTFANILHKDLKF----------------------------------------P 891 (975)
Q Consensus 858 G~il~ell~G~~Pf~~~~------~~~~~~~i~~~~~~~----------------------------------------p 891 (975)
||++|+|++|..||.+.+ ....+..+......+ .
T Consensus 222 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (373)
T 1q8y_A 222 ACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYK 301 (373)
T ss_dssp HHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhccc
Confidence 999999999999998654 222333332210000 1
Q ss_pred CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 892 SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 892 ~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
.....+..+.+||.+||++||.+||| +.|+|+||||++.
T Consensus 302 ~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~hp~f~~~ 340 (373)
T 1q8y_A 302 FSKDEAKEISDFLSPMLQLDPRKRAD----AGGLVNHPWLKDT 340 (373)
T ss_dssp CCHHHHHHHHHHHGGGGCSSTTTCBC----HHHHHTCGGGTTC
T ss_pred CCcchHHHHHHHHHHHhccCccccCC----HHHHhhChhhhcc
Confidence 11234567899999999999999999 9999999999875
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=332.84 Aligned_cols=228 Identities=21% Similarity=0.312 Sum_probs=184.2
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch---------------------------hccccccCCeEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV---------------------------MLNRNKTKTHVCLI 720 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~---------------------------~~~~~~~~~~~~lV 720 (975)
.++|++++.||+|+||.||+|.+..+++.||||++.... +........++|+|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 357999999999999999999999999999999987531 11112257789999
Q ss_pred EeccCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC------------------
Q 002051 721 TDYCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN------------------ 780 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~--~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~------------------ 780 (975)
||||+|++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~ 169 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN 169 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCC
Confidence 99999999999997632 2568999999999999999999999999999999999999844
Q ss_pred -CcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHH
Q 002051 781 -GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALG 858 (975)
Q Consensus 781 -g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG 858 (975)
..+||+|||.+..... .....||+.|+|||++.+. .++.++||||||
T Consensus 170 ~~~~kl~Dfg~~~~~~~-------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG 218 (289)
T 1x8b_A 170 KVMFKIGDLGHVTRISS-------------------------------PQVEEGDSRFLANEVLQENYTHLPKADIFALA 218 (289)
T ss_dssp CCCEEECCCTTCEETTC-------------------------------SCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHH
T ss_pred ceEEEEcccccccccCC-------------------------------ccccCCCccccChhHhcCCCCCCchhhHHHHH
Confidence 4799999999855331 1223589999999999876 556799999999
Q ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 859 ILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 859 ~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
|++|+|++|.+|+.... ....+...... ..+..++..+.+||.+||..||.+||| +.++++||||++.
T Consensus 219 ~il~~l~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~ll~h~~~~~~ 286 (289)
T 1x8b_A 219 LTVVCAAGAEPLPRNGD---QWHEIRQGRLP-RIPQVLSQEFTELLKVMIHPDPERRPS----AMALVKHSVLLSA 286 (289)
T ss_dssp HHHHHHTTCCCCCSSSH---HHHHHHTTCCC-CCSSCCCHHHHHHHHHHTCSSGGGSCC----HHHHHTCTTC---
T ss_pred HHHHHHhcCCCCCcchh---HHHHHHcCCCC-CCCcccCHHHHHHHHHHhCCCcccCCC----HHHHhhChHhhhh
Confidence 99999999998875543 23344444332 223457899999999999999999999 9999999999864
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-36 Score=331.66 Aligned_cols=225 Identities=23% Similarity=0.381 Sum_probs=185.1
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch---------------------------hccccccCCeEE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV---------------------------MLNRNKTKTHVC 718 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~---------------------------~~~~~~~~~~~~ 718 (975)
+..++|++++.||+|+||.||+|.+..+++.||+|++.... +........++|
T Consensus 8 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 87 (294)
T 4eqm_A 8 IINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYY 87 (294)
T ss_dssp CEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEE
T ss_pred HhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEE
Confidence 34578999999999999999999999999999999874321 112223677899
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
+|||||+|++|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 88 lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 88 LVMEYIEGPTLSEYIESH--GPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp EEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred EEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 999999999999999875 569999999999999999999999999999999999999999999999999996543110
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~ 878 (975)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+...
T Consensus 166 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~ 219 (294)
T 4eqm_A 166 --------------------------LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS 219 (294)
T ss_dssp -----------------------------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHH
T ss_pred --------------------------ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 112234579999999999999999999999999999999999999999988877
Q ss_pred HHHHHHhcCCCCC---CCCCCcHHHHHHHHHhcccCccccCCC
Q 002051 879 TFANILHKDLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGS 918 (975)
Q Consensus 879 ~~~~i~~~~~~~p---~~~~~s~~~~~li~~~L~~dP~~R~t~ 918 (975)
............. ....++..+.++|.+||..||.+||+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~ 262 (294)
T 4eqm_A 220 IAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKT 262 (294)
T ss_dssp HHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSS
T ss_pred HHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHcccc
Confidence 7766665543321 234578999999999999999999963
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-38 Score=357.39 Aligned_cols=224 Identities=19% Similarity=0.182 Sum_probs=178.5
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------hccc-------------------
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------MLNR------------------- 710 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------~~~~------------------- 710 (975)
.++|++.+.||+|+||+||+|.++.+|+.||||++.+.. .+..
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 568999999999999999999999999999999986321 0000
Q ss_pred cccCC-----------------eEEEEEeccCCCCHHHHHhhCCCCCCC-------HHHHHHHHHHHHHHHHHHHHCCCe
Q 002051 711 NKTKT-----------------HVCLITDYCPGGELFLLLDRQPTKVLK-------EDAVRFYAAEVVVALEYLHCQGII 766 (975)
Q Consensus 711 ~~~~~-----------------~~~lV~Ey~~ggsL~~~l~~~~~~~l~-------~~~i~~i~~qIl~aL~yLH~~gIi 766 (975)
....+ ..||||||| +|+|.+++... ..++ +..+..++.||+.||.|||++||+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~--~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iv 228 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVL--LSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLV 228 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHH--HHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhc--cccccccccccHHHHHHHHHHHHHHHHHHHhCCee
Confidence 00010 389999999 78999999863 2244 478888999999999999999999
Q ss_pred ecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC
Q 002051 767 YRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA 846 (975)
Q Consensus 767 HrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~ 846 (975)
||||||+|||++.++.+||+|||+++... ......+| +.|+|||++.+.
T Consensus 229 HrDikp~NIll~~~~~~kL~DFG~a~~~~------------------------------~~~~~~~g-~~y~aPE~~~~~ 277 (377)
T 3byv_A 229 HTYLRPVDIVLDQRGGVFLTGFEHLVRDG------------------------------ARVVSSVS-RGFEPPELEARR 277 (377)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETT------------------------------CEEECCCC-TTCCCHHHHHHH
T ss_pred cCCCCHHHEEEcCCCCEEEEechhheecC------------------------------CcccCCCC-cCccChhhhccc
Confidence 99999999999999999999999986422 11234567 999999999887
Q ss_pred -----------CCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCcccc
Q 002051 847 -----------GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915 (975)
Q Consensus 847 -----------~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R 915 (975)
.++.++|||||||++|+|++|+.||.+.+.......+.. ....++..+.+||.+||+.||.+|
T Consensus 278 ~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~~~------~~~~~~~~~~~li~~~L~~dp~~R 351 (377)
T 3byv_A 278 ATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFR------SCKNIPQPVRALLEGFLRYPKEDR 351 (377)
T ss_dssp TSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGGGGS------SCCCCCHHHHHHHHHHTCSSGGGC
T ss_pred ccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhhhhh------hccCCCHHHHHHHHHHcCCCchhC
Confidence 899999999999999999999999977654333332222 224578999999999999999999
Q ss_pred CCChhhHHHHHcCCCccCCC
Q 002051 916 LGSHEGANEIKKHPFFKGVN 935 (975)
Q Consensus 916 ~t~~~~~~elL~Hp~f~~~~ 935 (975)
|| +.++++||||+++.
T Consensus 352 pt----~~e~l~hp~f~~~~ 367 (377)
T 3byv_A 352 LL----PLQAMETPEYEQLR 367 (377)
T ss_dssp CC----HHHHHTSHHHHHHH
T ss_pred CC----HHHHhhChHHHHHH
Confidence 99 99999999998754
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-36 Score=332.89 Aligned_cols=231 Identities=23% Similarity=0.357 Sum_probs=187.7
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------------------hccccccCCeE
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------------------MLNRNKTKTHV 717 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------------~~~~~~~~~~~ 717 (975)
..+..++|++.+.||+|+||+||+|++ +|+.||||++.... +........++
T Consensus 32 ~~i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 109 (309)
T 3p86_A 32 MDIPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL 109 (309)
T ss_dssp CBCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCC
T ss_pred ccCChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCce
Confidence 457788999999999999999999987 68899999986432 11122256778
Q ss_pred EEEEeccCCCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEEecCCcEEEeeccCCCcc
Q 002051 718 CLITDYCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLTDFDLSCLT 794 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~-~~l~~~~i~~i~~qIl~aL~yLH~~g--IiHrDIKp~NILl~~~g~vkL~DFG~a~~~ 794 (975)
|+|||||++|+|.+++..... ..+++..+..++.||+.||.|||++| |+||||||+|||++.++.+||+|||+++..
T Consensus 110 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp EEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred EEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 999999999999999986421 23899999999999999999999999 999999999999999999999999998643
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCC
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 874 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~ 874 (975)
... ........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus 190 ~~~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~ 242 (309)
T 3p86_A 190 AST---------------------------FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL 242 (309)
T ss_dssp ---------------------------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTS
T ss_pred ccc---------------------------ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 211 11123457999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 875 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
+.......+.......+.+..+++.+.+||.+||..||.+||| +.++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~~ll~ 291 (309)
T 3p86_A 243 NPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPS----FATIMD 291 (309)
T ss_dssp CHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred CHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcC----HHHHHH
Confidence 8888877776655555556678999999999999999999999 777765
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-37 Score=341.37 Aligned_cols=235 Identities=33% Similarity=0.517 Sum_probs=190.5
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc--------------------cc-----------cccCCeE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--------------------NR-----------NKTKTHV 717 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~--------------------~~-----------~~~~~~~ 717 (975)
++|++++.||+|+||.||+|.+..+++.||||++.+.... .. ......+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 89 (322)
T 2ycf_A 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDY 89 (322)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSSE
T ss_pred hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCce
Confidence 5799999999999999999999999999999998643210 00 0023458
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc---EEEeeccCCCcc
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH---VSLTDFDLSCLT 794 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~---vkL~DFG~a~~~ 794 (975)
|+|||||++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++. +||+|||++...
T Consensus 90 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 167 (322)
T 2ycf_A 90 YIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167 (322)
T ss_dssp EEEEECCTTEETHHHHSTT--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEEC
T ss_pred EEEEecCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceec
Confidence 9999999999999999764 56999999999999999999999999999999999999987664 999999998654
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhc---CCCCCChhHHHHHHHHHHHHHhCCCCC
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPF 871 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~~~k~DIWSLG~il~ell~G~~Pf 871 (975)
... .......||+.|+|||++. ...++.++|||||||++|+|++|..||
T Consensus 168 ~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf 219 (322)
T 2ycf_A 168 GET----------------------------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219 (322)
T ss_dssp CCC----------------------------HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSS
T ss_pred ccc----------------------------cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 311 0112346899999999974 466889999999999999999999999
Q ss_pred CCCCHH-HHHHHHHhcCCCCCC--CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcc
Q 002051 872 RGKTRQ-KTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 937 (975)
Q Consensus 872 ~~~~~~-~~~~~i~~~~~~~p~--~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~ 937 (975)
...... .....+..+...+.. ...++..+.+||.+||..||.+||| +.++|+||||++.+|.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps----~~~~l~h~~~~~~~~~ 284 (322)
T 2ycf_A 220 SEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT----TEEALRHPWLQDEDMK 284 (322)
T ss_dssp CSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC----HHHHHTSGGGCCHHHH
T ss_pred cccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCC----HHHHhhCcCcCCHHHH
Confidence 765433 233444444443321 1457889999999999999999999 9999999999988875
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=332.57 Aligned_cols=234 Identities=27% Similarity=0.447 Sum_probs=198.6
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~lV~ 721 (975)
.++|++++.||+|+||.||+|.+..+++.||||++..... .........+|+||
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 100 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence 4589999999999999999999999999999999865321 11122567899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC---CcEEEeeccCCCccCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~---g~vkL~DFG~a~~~~~~~ 798 (975)
||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+ +.+||+|||++......
T Consensus 101 e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~- 177 (287)
T 2wei_A 101 ELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN- 177 (287)
T ss_dssp CCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC-
T ss_pred EccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCC-
Confidence 999999999988764 469999999999999999999999999999999999999754 46999999998654311
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~ 878 (975)
.......||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+...
T Consensus 178 ---------------------------~~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~ 229 (287)
T 2wei_A 178 ---------------------------TKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYD 229 (287)
T ss_dssp ---------------------------SSCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred ---------------------------CccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCHHH
Confidence 111234588999999999765 8999999999999999999999999998888
Q ss_pred HHHHHHhcCCCCCC--CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCc
Q 002051 879 TFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936 (975)
Q Consensus 879 ~~~~i~~~~~~~p~--~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~ 936 (975)
....+..+...++. ...++..+.+||.+||..||.+||| +.++|+||||+...+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~ell~hp~~~~~~~ 285 (287)
T 2wei_A 230 ILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRIT----ATQCLEHPWIQKYSS 285 (287)
T ss_dssp HHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHSHHHHHHCC
T ss_pred HHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcC----HHHHhcCHHHhcccc
Confidence 88888877655443 3567899999999999999999999 999999999986654
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-36 Score=331.42 Aligned_cols=231 Identities=28% Similarity=0.387 Sum_probs=197.0
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-------------------------ccccccCCeEEEEEe
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-------------------------LNRNKTKTHVCLITD 722 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-------------------------~~~~~~~~~~~lV~E 722 (975)
.+.|++++.||+|+||.||+|.+..+++.||||++..... .........+|+|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 4579999999999999999999999999999999864321 111225678999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
|+++++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 101 ~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~---- 173 (303)
T 3a7i_A 101 YLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ---- 173 (303)
T ss_dssp CCTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB----
T ss_pred eCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccc----
Confidence 9999999999965 569999999999999999999999999999999999999999999999999986543110
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 882 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~ 882 (975)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||...........
T Consensus 174 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 230 (303)
T 3a7i_A 174 -----------------------IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFL 230 (303)
T ss_dssp -----------------------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH
T ss_pred -----------------------cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHH
Confidence 112345789999999999999999999999999999999999999998888777766
Q ss_pred HHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 883 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 883 i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
+..... ......++..+.+||.+||..||.+||| +.++++||||..
T Consensus 231 ~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~~~~~~~ 276 (303)
T 3a7i_A 231 IPKNNP-PTLEGNYSKPLKEFVEACLNKEPSFRPT----AKELLKHKFILR 276 (303)
T ss_dssp HHHSCC-CCCCSSCCHHHHHHHHHHCCSSGGGSCC----HHHHTTCHHHHH
T ss_pred hhcCCC-CCCccccCHHHHHHHHHHcCCChhhCcC----HHHHhhChhhhc
Confidence 655432 2233457889999999999999999999 999999999964
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-36 Score=338.41 Aligned_cols=233 Identities=26% Similarity=0.414 Sum_probs=188.9
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccC------C
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTK------T 715 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~------~ 715 (975)
.++|.+.+.||+|+||.||+|.++.+|+.||||++..... ....... .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 4689999999999999999999999999999999864310 0000111 2
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
.+|+||||+. ++|.+++. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 103 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 177 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD 177 (353)
T ss_dssp CCEEEEECCS-EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred eEEEEecccc-CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence 4599999995 68887764 349999999999999999999999999999999999999999999999999986532
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 874 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~ 874 (975)
. .....+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.
T Consensus 178 ~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 227 (353)
T 3coi_A 178 A------------------------------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 227 (353)
T ss_dssp ------------------------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSS
T ss_pred C------------------------------CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 1 1123578999999999987 67899999999999999999999999998
Q ss_pred CHHHHHHHHHhcC----------------------------CCCC-CCCCCcHHHHHHHHHhcccCccccCCChhhHHHH
Q 002051 875 TRQKTFANILHKD----------------------------LKFP-SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 925 (975)
Q Consensus 875 ~~~~~~~~i~~~~----------------------------~~~p-~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~el 925 (975)
+..+.+..+.... ..++ ....++..+.+||.+||+.||.+||| +.++
T Consensus 228 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt----~~e~ 303 (353)
T 3coi_A 228 DYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLT----AAQA 303 (353)
T ss_dssp CHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCC----HHHH
T ss_pred CHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCC----HHHH
Confidence 8777766654310 0011 12356889999999999999999999 9999
Q ss_pred HcCCCccCCCcchh
Q 002051 926 KKHPFFKGVNWALV 939 (975)
Q Consensus 926 L~Hp~f~~~~~~~~ 939 (975)
|+||||+.+.....
T Consensus 304 l~hp~f~~~~~~~~ 317 (353)
T 3coi_A 304 LTHPFFEPFRDPEE 317 (353)
T ss_dssp HTSGGGTTTCCGGG
T ss_pred hcCcchhhccCccc
Confidence 99999998766544
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-36 Score=334.40 Aligned_cols=239 Identities=24% Similarity=0.374 Sum_probs=187.4
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch---------------------h---cc--------------
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV---------------------M---LN-------------- 709 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~---------------------~---~~-------------- 709 (975)
.++|++++.||+|+||.||+|.+..+++.||+|++.... + ..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 578999999999999999999999999999999875321 0 00
Q ss_pred ccccCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe-cCCcEEEeec
Q 002051 710 RNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSLTDF 788 (975)
Q Consensus 710 ~~~~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~-~~g~vkL~DF 788 (975)
.......+|+||||+. |+|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Df 165 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDF 165 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCC
T ss_pred cccccCceeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccC
Confidence 0123468899999996 699999965 5689999999999999999999999999999999999998 5679999999
Q ss_pred cCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhC
Q 002051 789 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYG 867 (975)
Q Consensus 789 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G 867 (975)
|++........ .........||+.|+|||++.+ ..++.++|||||||++|+|++|
T Consensus 166 g~~~~~~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g 221 (320)
T 2i6l_A 166 GLARIMDPHYS------------------------HKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG 221 (320)
T ss_dssp TTCBCC--------------------------------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHS
T ss_pred ccccccCCCcc------------------------cccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhC
Confidence 99966431100 0011233467999999999876 6788999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCC----------------------CC------CCCCcHHHHHHHHHhcccCccccCCCh
Q 002051 868 YTPFRGKTRQKTFANILHKDLKF----------------------PS------STPTSLHAKQLMYRLLHRDPKSRLGSH 919 (975)
Q Consensus 868 ~~Pf~~~~~~~~~~~i~~~~~~~----------------------p~------~~~~s~~~~~li~~~L~~dP~~R~t~~ 919 (975)
+.||.+.+....+..+....... +. ...++..+.+||.+||+.||.+|||
T Consensus 222 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-- 299 (320)
T 2i6l_A 222 KTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLT-- 299 (320)
T ss_dssp SCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCC--
T ss_pred CCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCC--
Confidence 99999988877777665432110 10 1347889999999999999999999
Q ss_pred hhHHHHHcCCCccCCCcch
Q 002051 920 EGANEIKKHPFFKGVNWAL 938 (975)
Q Consensus 920 ~~~~elL~Hp~f~~~~~~~ 938 (975)
+.++|+||||+..+|..
T Consensus 300 --~~ell~hp~~~~~~~p~ 316 (320)
T 2i6l_A 300 --AEEALSHPYMSIYSFPM 316 (320)
T ss_dssp --HHHHHTSHHHHTTCC--
T ss_pred --HHHHhCCcccccccCcc
Confidence 99999999999887754
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-36 Score=329.67 Aligned_cols=232 Identities=20% Similarity=0.245 Sum_probs=185.8
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------ccccccCCeEEEEE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------~~~~~~~~~~~lV~ 721 (975)
.+..++|++.+.||+|+||.||+|.+..+++.||||++..... ........+.|+||
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 85 (298)
T 1csn_A 6 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI 85 (298)
T ss_dssp CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred cccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence 4557789999999999999999999999999999999864321 11122567889999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc-----EEEeeccCCCccCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH-----VSLTDFDLSCLTSC 796 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~-----vkL~DFG~a~~~~~ 796 (975)
||+ +++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++. +||+|||++.....
T Consensus 86 e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~ 163 (298)
T 1csn_A 86 DLL-GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD 163 (298)
T ss_dssp ECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred Eec-CCCHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccc
Confidence 999 99999999875 346999999999999999999999999999999999999987765 99999999976542
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCC--
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK-- 874 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~-- 874 (975)
..... ...........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.
T Consensus 164 ~~~~~--------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 223 (298)
T 1csn_A 164 PVTKQ--------------------HIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA 223 (298)
T ss_dssp TTTCC--------------------BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCS
T ss_pred ccccc--------------------cccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhc
Confidence 21100 00112234568999999999999999999999999999999999999999873
Q ss_pred -CHHHHHHHHHhcCCCCC---CCCCCcHHHHHHHHHhcccCccccCCC
Q 002051 875 -TRQKTFANILHKDLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGS 918 (975)
Q Consensus 875 -~~~~~~~~i~~~~~~~p---~~~~~s~~~~~li~~~L~~dP~~R~t~ 918 (975)
.....+..+.......+ ....++..+.+||.+||..||.+|||+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~ 271 (298)
T 1csn_A 224 ATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDY 271 (298)
T ss_dssp CCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCH
T ss_pred cccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCH
Confidence 34444444443322111 113578899999999999999999993
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-36 Score=335.58 Aligned_cols=234 Identities=25% Similarity=0.342 Sum_probs=191.5
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCCe---EEEEEEeccch-------------------------hccccccCC
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGV-------------------------MLNRNKTKT 715 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~---~vAiK~l~~~~-------------------------~~~~~~~~~ 715 (975)
..+..++|++.+.||+|+||.||+|.+..+++ .||||+++... +........
T Consensus 44 ~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 123 (325)
T 3kul_A 44 REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR 123 (325)
T ss_dssp CBCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGG
T ss_pred cccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC
Confidence 35677899999999999999999999986554 59999987531 111222567
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
.+|||||||+|++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 202 (325)
T 3kul_A 124 LAMIVTEYMENGSLDTFLRTH-DGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE 202 (325)
T ss_dssp CCEEEEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred ccEEEeeCCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence 789999999999999999754 3569999999999999999999999999999999999999999999999999997654
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 874 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~ 874 (975)
..... ........+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus 203 ~~~~~------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~ 258 (325)
T 3kul_A 203 DDPDA------------------------AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM 258 (325)
T ss_dssp ----C------------------------CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTS
T ss_pred cCccc------------------------eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccC
Confidence 22110 011123356788999999998889999999999999999998 99999998
Q ss_pred CHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 875 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
........+... ...+....++..+.+||.+||..||.+||| +.+|++
T Consensus 259 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~eil~ 306 (325)
T 3kul_A 259 TNRDVISSVEEG-YRLPAPMGCPHALHQLMLDCWHKDRAQRPR----FSQIVS 306 (325)
T ss_dssp CHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred CHHHHHHHHHcC-CCCCCCCCcCHHHHHHHHHHccCChhhCcC----HHHHHH
Confidence 888877777655 445555678999999999999999999999 666654
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-36 Score=339.74 Aligned_cols=235 Identities=21% Similarity=0.313 Sum_probs=192.0
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeC-------CCeEEEEEEeccch--------------------------hccc
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGV--------------------------MLNR 710 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~-------t~~~vAiK~l~~~~--------------------------~~~~ 710 (975)
+.+..++|++.+.||+|+||.||+|.+.. ++..||||+++... ++..
T Consensus 76 ~~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~ 155 (370)
T 2psq_A 76 WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGA 155 (370)
T ss_dssp TBCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEE
T ss_pred ccccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence 34667899999999999999999999863 45689999986531 1111
Q ss_pred cccCCeEEEEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 002051 711 NKTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 776 (975)
Q Consensus 711 ~~~~~~~~lV~Ey~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NIL 776 (975)
......+|+|||||+||+|.+++.... ...++...+..++.||+.||.|||++||+||||||+|||
T Consensus 156 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIl 235 (370)
T 2psq_A 156 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 235 (370)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEE
T ss_pred EccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEE
Confidence 225677899999999999999998643 235899999999999999999999999999999999999
Q ss_pred EecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHH
Q 002051 777 LQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWA 856 (975)
Q Consensus 777 l~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWS 856 (975)
++.++.+||+|||+++....... ........||+.|+|||++.+..++.++||||
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~-------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws 290 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDY-------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 290 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCT-------------------------TCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHH
T ss_pred ECCCCCEEEccccCCcccCcccc-------------------------eecccCCCcccceECHhHhcCCCCCcHHHHHH
Confidence 99999999999999965432110 01122346788999999999999999999999
Q ss_pred HHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 857 LGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 857 LG~il~ell~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
|||++|+|++ |..||.+....+.+..+..+. ..+.+..++..+.+||.+||+.||.+||| +.|++++
T Consensus 291 lG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dP~~Rpt----~~ell~~ 358 (370)
T 2psq_A 291 FGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-RMDKPANCTNELYMMMRDCWHAVPSQRPT----FKQLVED 358 (370)
T ss_dssp HHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC-CCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHHH
Confidence 9999999998 999999988777776665543 33444568899999999999999999999 7777653
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-36 Score=324.26 Aligned_cols=232 Identities=20% Similarity=0.343 Sum_probs=194.1
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-----------------------hccccccCCeEEEE
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-----------------------MLNRNKTKTHVCLI 720 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-----------------------~~~~~~~~~~~~lV 720 (975)
+.+..++|++++.||+|+||.||+|.+. +++.||+|++.... +.....+...+|+|
T Consensus 5 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (269)
T 4hcu_A 5 WVIDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 83 (269)
T ss_dssp CBCCGGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred EEeChhhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEE
Confidence 4567789999999999999999999986 57789999987542 11222356789999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 800 (975)
|||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 84 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 160 (269)
T 4hcu_A 84 FEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-- 160 (269)
T ss_dssp EECCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH--
T ss_pred EEeCCCCcHHHHHHhc-CcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccc--
Confidence 9999999999999764 3569999999999999999999999999999999999999999999999999986543110
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 879 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~ 879 (975)
........+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+.+....
T Consensus 161 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~ 216 (269)
T 4hcu_A 161 ------------------------YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV 216 (269)
T ss_dssp ------------------------HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH
T ss_pred ------------------------cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHH
Confidence 011223457888999999998999999999999999999999 9999999888888
Q ss_pred HHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 880 ~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
...+.... ....+...+..+.+||.+||+.||.+||| +.++++|
T Consensus 217 ~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~ll~~ 260 (269)
T 4hcu_A 217 VEDISTGF-RLYKPRLASTHVYQIMNHCWRERPEDRPA----FSRLLRQ 260 (269)
T ss_dssp HHHHHTTC-CCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HHHHhcCc-cCCCCCcCCHHHHHHHHHHccCCcccCcC----HHHHHHH
Confidence 77776653 33334557899999999999999999999 8888765
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-36 Score=335.31 Aligned_cols=232 Identities=25% Similarity=0.404 Sum_probs=186.2
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhcc-------------------------cc--ccCCeEE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-------------------------RN--KTKTHVC 718 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~-------------------------~~--~~~~~~~ 718 (975)
...++|++.+.||+|+||+||+|.+..+++.||||++....... .. ....++|
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 85 (319)
T 4euu_A 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (319)
T ss_dssp CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEE
Confidence 34578999999999999999999999999999999987532110 01 1344889
Q ss_pred EEEeccCCCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE----ecCCcEEEeeccCCCc
Q 002051 719 LITDYCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL----QGNGHVSLTDFDLSCL 793 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~-~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl----~~~g~vkL~DFG~a~~ 793 (975)
+|||||+|++|.+++..... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp EEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred EEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 99999999999999986422 249999999999999999999999999999999999999 6777899999999965
Q ss_pred cCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhc--------CCCCCChhHHHHHHHHHHHHH
Q 002051 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA--------GAGHTSAVDWWALGILLYEML 865 (975)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~--------~~~~~~k~DIWSLG~il~ell 865 (975)
.... ......+||+.|+|||++. +..++.++|||||||++|+|+
T Consensus 166 ~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~ 217 (319)
T 4euu_A 166 LEDD----------------------------EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAA 217 (319)
T ss_dssp CCTT----------------------------CCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHH
T ss_pred cCCC----------------------------CceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHH
Confidence 4321 1123457999999999986 567899999999999999999
Q ss_pred hCCCCCCCC----CHHHHHHHHHhcCC-------------------CCCCCC----CCcHHHHHHHHHhcccCccccCCC
Q 002051 866 YGYTPFRGK----TRQKTFANILHKDL-------------------KFPSST----PTSLHAKQLMYRLLHRDPKSRLGS 918 (975)
Q Consensus 866 ~G~~Pf~~~----~~~~~~~~i~~~~~-------------------~~p~~~----~~s~~~~~li~~~L~~dP~~R~t~ 918 (975)
+|..||... ...+.+..+..+.. .++... .++..+.+||++||++||++|||
T Consensus 218 ~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s- 296 (319)
T 4euu_A 218 TGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWG- 296 (319)
T ss_dssp HSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCC-
T ss_pred hCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhcc-
Confidence 999999643 23455555554332 112211 23557889999999999999999
Q ss_pred hhhHHHHHcCC
Q 002051 919 HEGANEIKKHP 929 (975)
Q Consensus 919 ~~~~~elL~Hp 929 (975)
++|+|+||
T Consensus 297 ---~~ell~h~ 304 (319)
T 4euu_A 297 ---FDQFFAET 304 (319)
T ss_dssp ---HHHHHHHH
T ss_pred ---HHHhhhcc
Confidence 99999986
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-36 Score=343.95 Aligned_cols=237 Identities=24% Similarity=0.371 Sum_probs=193.1
Q ss_pred cccccCCCcccccccccCCceEEEEEE-----EeCCCeEEEEEEeccchh--------------------------cccc
Q 002051 663 GEQINLQHFRPIKPLGSGDTGSVHLVE-----LCGSGQYFAMKAMDKGVM--------------------------LNRN 711 (975)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~-----~~~t~~~vAiK~l~~~~~--------------------------~~~~ 711 (975)
.+.+..++|++++.||+|+||.||+|+ +..+++.||||+++.... ....
T Consensus 16 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~ 95 (359)
T 3vhe_A 16 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC 95 (359)
T ss_dssp HHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeee
Confidence 346778899999999999999999999 445679999999865310 0000
Q ss_pred c-cCCeEEEEEeccCCCCHHHHHhhCCC----------------------------------------------------
Q 002051 712 K-TKTHVCLITDYCPGGELFLLLDRQPT---------------------------------------------------- 738 (975)
Q Consensus 712 ~-~~~~~~lV~Ey~~ggsL~~~l~~~~~---------------------------------------------------- 738 (975)
. ....+|+|||||+||+|.+++.....
T Consensus 96 ~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (359)
T 3vhe_A 96 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSD 175 (359)
T ss_dssp CSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------------
T ss_pred ecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccch
Confidence 1 34558999999999999999986432
Q ss_pred ------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcch
Q 002051 739 ------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 806 (975)
Q Consensus 739 ------------~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 806 (975)
..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 176 ~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~------- 248 (359)
T 3vhe_A 176 VEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD------- 248 (359)
T ss_dssp --------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT-------
T ss_pred hhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeeccccc-------
Confidence 1289999999999999999999999999999999999999999999999999965432110
Q ss_pred hhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHh
Q 002051 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILH 885 (975)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~~i~~ 885 (975)
........||+.|+|||++.+..++.++|||||||++|+|++ |..||.+......+...+.
T Consensus 249 ------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~ 310 (359)
T 3vhe_A 249 ------------------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 310 (359)
T ss_dssp ------------------CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH
T ss_pred ------------------chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHH
Confidence 112234568999999999999999999999999999999998 9999998776566655555
Q ss_pred cCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 886 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 886 ~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
.....+.+..+++.+.+||.+||+.||.+||| +.++++|
T Consensus 311 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~ell~~ 349 (359)
T 3vhe_A 311 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT----FSELVEH 349 (359)
T ss_dssp HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred cCCCCCCCCCCCHHHHHHHHHHccCChhhCCC----HHHHHHH
Confidence 55555555668899999999999999999999 8888765
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=333.11 Aligned_cols=245 Identities=22% Similarity=0.301 Sum_probs=191.8
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------ccccccCCeEEEEEe
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------LNRNKTKTHVCLITD 722 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------~~~~~~~~~~~lV~E 722 (975)
+..++|++++.||+|+||.||+|.+..+|+.||||++..... ........+.|+|||
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 6 MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp EETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred EEcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 446789999999999999999999999999999999864321 111225678899999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc-----EEEeeccCCCccCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH-----VSLTDFDLSCLTSCK 797 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~-----vkL~DFG~a~~~~~~ 797 (975)
|| +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++. +||+|||+++.....
T Consensus 86 ~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~ 163 (330)
T 2izr_A 86 LL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDP 163 (330)
T ss_dssp CC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCT
T ss_pred eC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecC
Confidence 99 99999999864 357999999999999999999999999999999999999998887 999999999764322
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCC---
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK--- 874 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~--- 874 (975)
.... ..........+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus 164 ~~~~--------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~ 223 (330)
T 2izr_A 164 ETKK--------------------HIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD 223 (330)
T ss_dssp TTCC--------------------BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS
T ss_pred CCCc--------------------cccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccc
Confidence 1100 00112234678999999999999999999999999999999999999999874
Q ss_pred CHHHHHHHHHhcCCCCCCC---CCCcHHHHHHHHHhcccCccccCCChhhHHHHHc----------CCCccCCCcc
Q 002051 875 TRQKTFANILHKDLKFPSS---TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK----------HPFFKGVNWA 937 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~~p~~---~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~----------Hp~f~~~~~~ 937 (975)
...+.+..+.......+.. ...+ .+.+||.+||..||.+||+ +++|++ ..+...++|.
T Consensus 224 ~~~~~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~----~~~l~~~l~~~~~~~~~~~~~~~dw~ 294 (330)
T 2izr_A 224 TLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPD----YDYLRKLFTDLFDRKGYMFDYEYDWI 294 (330)
T ss_dssp SHHHHHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCC----HHHHHHHHHHHHHHTTCCCSCCCTTT
T ss_pred cHHHHHHHHHhhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCC----HHHHHHHHHHHHHHcCCCCCCCccCC
Confidence 3344455554433222211 1234 8999999999999999999 444432 4455678887
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-36 Score=328.92 Aligned_cols=246 Identities=18% Similarity=0.258 Sum_probs=189.6
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc-----------------------cccccCCeEEEEEecc
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----------------------NRNKTKTHVCLITDYC 724 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~-----------------------~~~~~~~~~~lV~Ey~ 724 (975)
.++|++.+.||+|+||.||+|.+..+++.||||++...... .......+.|+||||+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 87 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 87 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc
Confidence 46899999999999999999999999999999986543210 1112567889999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE---ecCCcEEEeeccCCCccCCCCCCC
Q 002051 725 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 725 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl---~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
+++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..........
T Consensus 88 -~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~ 165 (296)
T 4hgt_A 88 -GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ 165 (296)
T ss_dssp -CCBHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred -CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCc
Confidence 99999999854 3469999999999999999999999999999999999999 788999999999997654221100
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCH---HH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR---QK 878 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~---~~ 878 (975)
...........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+. ..
T Consensus 166 --------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 225 (296)
T 4hgt_A 166 --------------------HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ 225 (296)
T ss_dssp --------------------BCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS
T ss_pred --------------------cCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhh
Confidence 0111233456899999999999999999999999999999999999999976432 22
Q ss_pred HHHHHHhcCCCCCC---CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc----------CCCccCCCcchh
Q 002051 879 TFANILHKDLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK----------HPFFKGVNWALV 939 (975)
Q Consensus 879 ~~~~i~~~~~~~p~---~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~----------Hp~f~~~~~~~~ 939 (975)
.+..+.......+. ...++..+.+||.+||+.||.+||| +.++++ ..|-..+||..+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~l~~~l~~~~~~~~~~~~~~~dw~~~ 295 (296)
T 4hgt_A 226 KYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPD----YSYLRQLFRNLFHRQGFSYDYVFDWNML 295 (296)
T ss_dssp HHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCC----HHHHHHHHHHHHHHHTCCTTCCCGGGGC
T ss_pred hhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCC----HHHHHHHHHHHHHHhCCCccCccchhhc
Confidence 33333332222221 1346889999999999999999999 555542 456666777654
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-36 Score=334.43 Aligned_cols=234 Identities=20% Similarity=0.290 Sum_probs=187.2
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCCeE----EEEEEeccchhc-------------cc-----------cccCC
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQY----FAMKAMDKGVML-------------NR-----------NKTKT 715 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~----vAiK~l~~~~~~-------------~~-----------~~~~~ 715 (975)
..+..++|++++.||+|+||.||+|.+..+++. ||+|.+...... .. .....
T Consensus 8 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 87 (325)
T 3kex_A 8 RIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGS 87 (325)
T ss_dssp CBCCTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBS
T ss_pred hhcCHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC
Confidence 456678999999999999999999999888875 777766432100 00 01356
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
.+|+|||||.+|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 88 ~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 166 (325)
T 3kex_A 88 SLQLVTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLP 166 (325)
T ss_dssp SEEEEEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSC
T ss_pred ccEEEEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccC
Confidence 789999999999999999764 3468999999999999999999999999999999999999999999999999997653
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 874 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~ 874 (975)
.... ........||+.|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus 167 ~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 221 (325)
T 3kex_A 167 PDDK-------------------------QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGL 221 (325)
T ss_dssp CCTT-------------------------CCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS
T ss_pred cccc-------------------------cccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCcccc
Confidence 2211 011234567889999999999999999999999999999999 99999988
Q ss_pred CHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 875 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
........+.... ..+....++..+.+||.+||..||.+||| +.++++|
T Consensus 222 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~el~~~ 270 (325)
T 3kex_A 222 RLAEVPDLLEKGE-RLAQPQICTIDVYMVMVKCWMIDENIRPT----FKELANE 270 (325)
T ss_dssp CTTHHHHHHHTTC-BCCCCTTBCTTTTHHHHHHTCSCTTTSCC----HHHHHHH
T ss_pred CHHHHHHHHHcCC-CCCCCCcCcHHHHHHHHHHcCCChhhCcC----HHHHHHH
Confidence 7777666665543 33334457778999999999999999999 6666654
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-36 Score=332.67 Aligned_cols=229 Identities=27% Similarity=0.386 Sum_probs=191.4
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc--------------------------------ccccc
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--------------------------------NRNKT 713 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~--------------------------------~~~~~ 713 (975)
...++|++.+.||+|+||.||+|.+..+++.||||++...... .....
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 3467899999999999999999999999999999998654211 11125
Q ss_pred CCeEEEEEeccCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe-cCCcEEEeeccCC
Q 002051 714 KTHVCLITDYCPG-GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFDLS 791 (975)
Q Consensus 714 ~~~~~lV~Ey~~g-gsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~-~~g~vkL~DFG~a 791 (975)
...+|+||||+.+ ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~ 197 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 197 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred CCcEEEEEEcCCCCccHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCccc
Confidence 6788999999976 8999999874 5699999999999999999999999999999999999999 7889999999998
Q ss_pred CccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCC-CChhHHHHHHHHHHHHHhCCCC
Q 002051 792 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTP 870 (975)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-~~k~DIWSLG~il~ell~G~~P 870 (975)
...... ......||+.|+|||++.+..+ +.++|||||||++|+|++|..|
T Consensus 198 ~~~~~~-----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~p 248 (320)
T 3a99_A 198 ALLKDT-----------------------------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 248 (320)
T ss_dssp EECCSS-----------------------------CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCS
T ss_pred cccccc-----------------------------cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCC
Confidence 654311 1123568999999999987665 6789999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcc
Q 002051 871 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 937 (975)
Q Consensus 871 f~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~ 937 (975)
|.... .+......++ ..++..+.+||.+||..||.+||| +.+|++||||+++.+.
T Consensus 249 f~~~~------~~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps----~~~ll~hp~~~~~~~~ 303 (320)
T 3a99_A 249 FEHDE------EIIRGQVFFR--QRVSSECQHLIRWCLALRPSDRPT----FEEIQNHPWMQDVLLP 303 (320)
T ss_dssp CCSHH------HHHHCCCCCS--SCCCHHHHHHHHHHTCSSGGGSCC----HHHHHTSGGGSSCCCH
T ss_pred CCChh------hhhccccccc--ccCCHHHHHHHHHHccCChhhCcC----HHHHhcCHhhcCccCc
Confidence 97532 2333333333 457899999999999999999999 9999999999988665
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-36 Score=338.55 Aligned_cols=235 Identities=23% Similarity=0.395 Sum_probs=185.3
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------------------cccc
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------------------LNRN 711 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------------------~~~~ 711 (975)
..++|++++.||+|+||.||+|.+.. |+.||||++..... ....
T Consensus 20 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 98 (362)
T 3pg1_A 20 MQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIF 98 (362)
T ss_dssp TTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEE
T ss_pred hccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeE
Confidence 35789999999999999999999855 89999998854210 0000
Q ss_pred -----ccCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEe
Q 002051 712 -----KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLT 786 (975)
Q Consensus 712 -----~~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~ 786 (975)
....++|+|||||. |+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+
T Consensus 99 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~ 176 (362)
T 3pg1_A 99 VHFEEPAMHKLYLVTELMR-TDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITIC 176 (362)
T ss_dssp EECCTTTCCEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred EeccCCCcceEEEEEccCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEE
Confidence 13347899999995 6898888753 3579999999999999999999999999999999999999999999999
Q ss_pred eccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHH
Q 002051 787 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEML 865 (975)
Q Consensus 787 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell 865 (975)
|||++...... .......||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 177 Dfg~~~~~~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~ 228 (362)
T 3pg1_A 177 DFNLAREDTAD----------------------------ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228 (362)
T ss_dssp CTTC-------------------------------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHH
T ss_pred ecCcccccccc----------------------------cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHH
Confidence 99998543211 11234578999999999987 67899999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhcCC------------------------CCCC------CCCCcHHHHHHHHHhcccCcccc
Q 002051 866 YGYTPFRGKTRQKTFANILHKDL------------------------KFPS------STPTSLHAKQLMYRLLHRDPKSR 915 (975)
Q Consensus 866 ~G~~Pf~~~~~~~~~~~i~~~~~------------------------~~p~------~~~~s~~~~~li~~~L~~dP~~R 915 (975)
+|+.||.+.+....+..+..... ..+. ....++.+.+||.+||++||.+|
T Consensus 229 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 308 (362)
T 3pg1_A 229 NRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRR 308 (362)
T ss_dssp HSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGS
T ss_pred hCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhC
Confidence 99999999888777776653110 1111 13457889999999999999999
Q ss_pred CCChhhHHHHHcCCCccCCCc
Q 002051 916 LGSHEGANEIKKHPFFKGVNW 936 (975)
Q Consensus 916 ~t~~~~~~elL~Hp~f~~~~~ 936 (975)
|| +.|+|+||||+++..
T Consensus 309 pt----~~ell~hp~f~~~~~ 325 (362)
T 3pg1_A 309 IS----TEQALRHPYFESLFD 325 (362)
T ss_dssp CC----HHHHHTSGGGTTTCC
T ss_pred CC----HHHHHcCchhhhccC
Confidence 99 999999999998743
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-36 Score=329.14 Aligned_cols=234 Identities=26% Similarity=0.471 Sum_probs=195.6
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------cccc--ccCCeEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRN--KTKTHVCL 719 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~--~~~~~~~l 719 (975)
.++|++++.||+|+||.||+|.++.+++.||+|++..... .... .....+|+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 4689999999999999999999999999999999864321 1111 24568999
Q ss_pred EEeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCC-----CeecCCCCCCEEEecCCcEEEeeccCCC
Q 002051 720 ITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQG-----IIYRDLKPENVLLQGNGHVSLTDFDLSC 792 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qIl~aL~yLH~~g-----IiHrDIKp~NILl~~~g~vkL~DFG~a~ 792 (975)
|||||++++|.+++... ....+++..+..++.||+.||.|||++| |+||||||+|||++.++.+||+|||++.
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999999999753 2345999999999999999999999999 9999999999999999999999999985
Q ss_pred ccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCC
Q 002051 793 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 872 (975)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~ 872 (975)
...... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus 165 ~~~~~~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 217 (279)
T 2w5a_A 165 ILNHDT---------------------------SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT 217 (279)
T ss_dssp HC---C---------------------------HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred eecccc---------------------------ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCc
Confidence 533110 01123468999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 873 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 873 ~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
..+.......+..+... +....++..+.+||.+||+.||.+||| +.+|++|+|+.+
T Consensus 218 ~~~~~~~~~~i~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~ll~~~~~~~ 273 (279)
T 2w5a_A 218 AFSQKELAGKIREGKFR-RIPYRYSDELNEIITRMLNLKDYHRPS----VEEILENPLILE 273 (279)
T ss_dssp CSSHHHHHHHHHHTCCC-CCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHTSTTCCG
T ss_pred ccCHHHHHHHHhhcccc-cCCcccCHHHHHHHHHHcCCCcccCCC----HHHHHhChhhhh
Confidence 98888877777776542 223457899999999999999999999 999999999974
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-36 Score=343.96 Aligned_cols=239 Identities=19% Similarity=0.267 Sum_probs=194.6
Q ss_pred ccccCCCcccccccccCCceEEEEEE-----EeCCCeEEEEEEeccch-------------------------hcccccc
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVE-----LCGSGQYFAMKAMDKGV-------------------------MLNRNKT 713 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~-----~~~t~~~vAiK~l~~~~-------------------------~~~~~~~ 713 (975)
..+..++|++++.||+|+||.||+|. +..+++.||||++.... +......
T Consensus 66 ~~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~ 145 (367)
T 3l9p_A 66 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 145 (367)
T ss_dssp CBCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hhcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEec
Confidence 34667899999999999999999999 45678899999985421 1122225
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC---cEEE
Q 002051 714 KTHVCLITDYCPGGELFLLLDRQP-----TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSL 785 (975)
Q Consensus 714 ~~~~~lV~Ey~~ggsL~~~l~~~~-----~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g---~vkL 785 (975)
....|+|||||+||+|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.+| .+||
T Consensus 146 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 146 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEE
Confidence 667899999999999999997632 23589999999999999999999999999999999999999555 5999
Q ss_pred eeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHH
Q 002051 786 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 865 (975)
Q Consensus 786 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell 865 (975)
+|||+++...... .........||+.|+|||++.+..++.++|||||||++|+|+
T Consensus 226 ~DFG~a~~~~~~~-------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ell 280 (367)
T 3l9p_A 226 GDFGMARDIYRAG-------------------------YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 280 (367)
T ss_dssp CCCHHHHHHHHHS-------------------------SCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCcccccccccc-------------------------ccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHH
Confidence 9999986432110 011223456899999999999999999999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCcc
Q 002051 866 Y-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932 (975)
Q Consensus 866 ~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~ 932 (975)
+ |..||.+.+..+.+..+..... .+....++..+.+||.+||+.||.+||| +.+|++|.++-
T Consensus 281 t~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~eil~~l~~~ 343 (367)
T 3l9p_A 281 SLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPEDRPN----FAIILERIEYC 343 (367)
T ss_dssp TTSCCSSTTCCHHHHHHHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHHHHHH
T ss_pred hCCCCCCCCCCHHHHHHHHHcCCC-CCCCccCCHHHHHHHHHHcCCCHhHCcC----HHHHHHHHHHH
Confidence 8 9999999988888877776543 3334567889999999999999999999 99999887764
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=348.49 Aligned_cols=254 Identities=19% Similarity=0.245 Sum_probs=198.5
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------ccccccCCeEEEEEec
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------LNRNKTKTHVCLITDY 723 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------~~~~~~~~~~~lV~Ey 723 (975)
..++|+++++||+|+||.||+|.+..+++.||||++..... ........+.||||||
T Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~ 84 (483)
T 3sv0_A 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL 84 (483)
T ss_dssp ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence 35789999999999999999999999999999998764321 0111256788999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE---ecCCcEEEeeccCCCccCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl---~~~g~vkL~DFG~a~~~~~~~~~ 800 (975)
| +++|.+++... ...+++..++.|+.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.+......
T Consensus 85 ~-g~sL~~ll~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (483)
T 3sv0_A 85 L-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH 162 (483)
T ss_dssp C-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred C-CCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccc
Confidence 9 99999999854 3569999999999999999999999999999999999999 58889999999999765422110
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC---HH
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT---RQ 877 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~---~~ 877 (975)
. ..........+||+.|+|||++.+..++.++|||||||+||+|++|+.||.+.. ..
T Consensus 163 ~--------------------~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~ 222 (483)
T 3sv0_A 163 Q--------------------HIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK 222 (483)
T ss_dssp C--------------------BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHH
T ss_pred c--------------------ccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHH
Confidence 0 011223346789999999999999999999999999999999999999998743 33
Q ss_pred HHHHHHHhcCCCCC---CCCCCcHHHHHHHHHhcccCccccCCChhhH---HHH---HcCCCccCCCcchhhcc
Q 002051 878 KTFANILHKDLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGA---NEI---KKHPFFKGVNWALVRCM 942 (975)
Q Consensus 878 ~~~~~i~~~~~~~p---~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~---~el---L~Hp~f~~~~~~~~~~~ 942 (975)
..+..+.......+ ....++.++.+||.+||..||.+||++.+.. +++ ..++|+..+||..+...
T Consensus 223 ~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~~~~~~~dW~~~~~~ 296 (483)
T 3sv0_A 223 QKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGFQFDYVFDWTILKYQ 296 (483)
T ss_dssp HHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCSSCCHHHHHTC-
T ss_pred HHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCCCccCCcCchhhccc
Confidence 44444433221111 1134678999999999999999999944321 222 36899999999977554
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=335.41 Aligned_cols=237 Identities=22% Similarity=0.320 Sum_probs=195.6
Q ss_pred cccccCCCcccccccccCCceEEEEEEEe-----CCCeEEEEEEeccch--------------------------hcccc
Q 002051 663 GEQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGV--------------------------MLNRN 711 (975)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~-----~t~~~vAiK~l~~~~--------------------------~~~~~ 711 (975)
.+.+..++|++.+.||+|+||.||+|.+. .+++.||||++.... +....
T Consensus 39 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 118 (344)
T 1rjb_A 39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC 118 (344)
T ss_dssp GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred CcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 45677889999999999999999999984 456789999986431 01112
Q ss_pred ccCCeEEEEEeccCCCCHHHHHhhCCC---------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC
Q 002051 712 KTKTHVCLITDYCPGGELFLLLDRQPT---------------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 770 (975)
Q Consensus 712 ~~~~~~~lV~Ey~~ggsL~~~l~~~~~---------------------~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDI 770 (975)
.....+|+|||||++|+|.+++..... ..+++..+..++.||+.||.|||++||+||||
T Consensus 119 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Di 198 (344)
T 1rjb_A 119 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDL 198 (344)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 256778999999999999999986432 24799999999999999999999999999999
Q ss_pred CCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCC
Q 002051 771 KPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS 850 (975)
Q Consensus 771 Kp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~ 850 (975)
||+|||++.++.+||+|||++........ ........||+.|+|||++.+..++.
T Consensus 199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~-------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~ 253 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGLARDIMSDSN-------------------------YVVRGNARLPVKWMAPESLFEGIYTI 253 (344)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTT-------------------------SEEETTEEECGGGCCHHHHHHCCCCH
T ss_pred ChhhEEEcCCCcEEeCCCccCcccccCcc-------------------------ceeccCccCccCccCHHHhccCCCCh
Confidence 99999999999999999999965432110 01123446788999999999999999
Q ss_pred hhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 851 AVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 851 k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
++|||||||++|+|++ |..||.+......+..++......+.+..++..+.+||.+||..||.+||| +.+|++|
T Consensus 254 ~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~l~~~ 328 (344)
T 1rjb_A 254 KSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPS----FPNLTSF 328 (344)
T ss_dssp HHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred hHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcC----HHHHHHH
Confidence 9999999999999998 999999877766677777766666666678999999999999999999999 8888765
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-36 Score=332.63 Aligned_cols=250 Identities=22% Similarity=0.295 Sum_probs=179.6
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCCe---EEEEEEeccchh--------------------------ccccccC
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGVM--------------------------LNRNKTK 714 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~---~vAiK~l~~~~~--------------------------~~~~~~~ 714 (975)
..+..++|++++.||+|+||.||+|.+..++. .||||++..... .......
T Consensus 18 ~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 97 (323)
T 3qup_A 18 VLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRS 97 (323)
T ss_dssp TBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC
T ss_pred cccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecc
Confidence 34667899999999999999999999987765 899999865311 0000112
Q ss_pred C------eEEEEEeccCCCCHHHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEE
Q 002051 715 T------HVCLITDYCPGGELFLLLDRQP----TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 784 (975)
Q Consensus 715 ~------~~~lV~Ey~~ggsL~~~l~~~~----~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vk 784 (975)
. ..|+|||||.+|+|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+|
T Consensus 98 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 98 RAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEE
T ss_pred ccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEE
Confidence 2 2399999999999999986521 12589999999999999999999999999999999999999999999
Q ss_pred EeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHH
Q 002051 785 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 864 (975)
Q Consensus 785 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~el 864 (975)
|+|||+++....... ........+++.|+|||++.+..++.++|||||||++|+|
T Consensus 178 l~Dfg~a~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 232 (323)
T 3qup_A 178 VADFGLSRKIYSGDY-------------------------YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEI 232 (323)
T ss_dssp ECCCCC------------------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred Eeecccccccccccc-------------------------ccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHH
Confidence 999999965432110 0112234568899999999999999999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh---hhHHHHHcCCCccCCCcchh
Q 002051 865 LY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH---EGANEIKKHPFFKGVNWALV 939 (975)
Q Consensus 865 l~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~---~~~~elL~Hp~f~~~~~~~~ 939 (975)
++ |..||.+.+.......+.... ..+....++..+.+||.+||+.||.+|||+. ..+++++.|||+.+....-+
T Consensus 233 l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~~~pl 310 (323)
T 3qup_A 233 MTRGQTPYAGIENAEIYNYLIGGN-RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQDPL 310 (323)
T ss_dssp HTTSCCTTTTCCGGGHHHHHHTTC-CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-----------
T ss_pred HhCCCCCccccChHHHHHHHhcCC-CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCCCCCC
Confidence 99 999999988888777776654 3344456789999999999999999999954 34778889999987655433
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-35 Score=322.82 Aligned_cols=234 Identities=22% Similarity=0.334 Sum_probs=191.6
Q ss_pred ccccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-----------------------hccccccCCeEE
Q 002051 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-----------------------MLNRNKTKTHVC 718 (975)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-----------------------~~~~~~~~~~~~ 718 (975)
..+.+..++|++++.||+|+||.||+|.+. ++..||+|++.... +.........+|
T Consensus 17 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 95 (283)
T 3gen_A 17 GSWEIDPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIF 95 (283)
T ss_dssp CTTBCCGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred CCccCCHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeE
Confidence 345678889999999999999999999885 67789999987542 112223667899
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
+|||||++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 96 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 174 (283)
T 3gen_A 96 IITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174 (283)
T ss_dssp EEECCCTTCBHHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH
T ss_pred EEEeccCCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccccccccc
Confidence 999999999999999763 3469999999999999999999999999999999999999999999999999986543110
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 877 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~ 877 (975)
........+|+.|+|||++.+..++.++|||||||++|+|++ |..||...+..
T Consensus 175 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~ 228 (283)
T 3gen_A 175 --------------------------YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS 228 (283)
T ss_dssp --------------------------HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH
T ss_pred --------------------------cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh
Confidence 011223456888999999998889999999999999999998 99999998888
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
.....+.... ........+..+.+||.+||+.||.+||| +.++++|
T Consensus 229 ~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~ll~~ 274 (283)
T 3gen_A 229 ETAEHIAQGL-RLYRPHLASEKVYTIMYSCWHEKADERPT----FKILLSN 274 (283)
T ss_dssp HHHHHHHTTC-CCCCCTTCCHHHHHHHHHTTCSSGGGSCC----HHHHHHH
T ss_pred HHHHHHhccc-CCCCCCcCCHHHHHHHHHHccCChhHCcC----HHHHHHH
Confidence 8777776653 33334457889999999999999999999 7887765
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-35 Score=324.00 Aligned_cols=240 Identities=25% Similarity=0.360 Sum_probs=190.2
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLI 720 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV 720 (975)
.+..++|.....||+|+||.||+|.+..+++.||||.+.... +.........+|+|
T Consensus 18 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 97 (295)
T 2clq_A 18 DYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIF 97 (295)
T ss_dssp EECBCTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccccCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEE
Confidence 355667777789999999999999999999999999876431 11122256789999
Q ss_pred EeccCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-CCcEEEeeccCCCccCCCC
Q 002051 721 TDYCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~-~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~-~g~vkL~DFG~a~~~~~~~ 798 (975)
|||+++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++.......
T Consensus 98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~ 177 (295)
T 2clq_A 98 MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN 177 (295)
T ss_dssp EECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--
T ss_pred EEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC
Confidence 99999999999998742 235779999999999999999999999999999999999997 8999999999986543110
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC--CCChhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--HTSAVDWWALGILLYEMLYGYTPFRGKTR 876 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~--~~~k~DIWSLG~il~ell~G~~Pf~~~~~ 876 (975)
.......||+.|+|||++.+.. ++.++|||||||++|+|++|..||.....
T Consensus 178 ---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 230 (295)
T 2clq_A 178 ---------------------------PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE 230 (295)
T ss_dssp ------------------------------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSS
T ss_pred ---------------------------CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCc
Confidence 1123457899999999997643 78899999999999999999999976433
Q ss_pred H-HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCC
Q 002051 877 Q-KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935 (975)
Q Consensus 877 ~-~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~ 935 (975)
. ...............+..++..+.+||.+||+.||++||| +.++|.||||+...
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~ll~~~~~~~~~ 286 (295)
T 2clq_A 231 PQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRAC----ANDLLVDEFLKVSS 286 (295)
T ss_dssp HHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCC----HHHHHTSGGGCC--
T ss_pred hhHHHHhhccccccccccccCCHHHHHHHHHHccCChhhCCC----HHHHhcChhhhhcc
Confidence 2 2222222222222334557899999999999999999999 99999999998654
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-35 Score=320.37 Aligned_cols=225 Identities=27% Similarity=0.419 Sum_probs=185.2
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch----------------------------hccccccCCeE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV----------------------------MLNRNKTKTHV 717 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~----------------------------~~~~~~~~~~~ 717 (975)
+..++|++.+.||+|+||.||+|.+ +++.||+|++.... +........++
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (271)
T 3dtc_A 4 IDFAELTLEEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNL 81 (271)
T ss_dssp CCTTSEEEEEEEEEETTEEEEEEEE--TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--C
T ss_pred cchhheeeeeeeccCCCeEEEEEEE--cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCce
Confidence 5678999999999999999999998 48899999986431 11112256778
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCCCCEEEec--------CCcEEEe
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG---IIYRDLKPENVLLQG--------NGHVSLT 786 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~g---IiHrDIKp~NILl~~--------~g~vkL~ 786 (975)
|+||||++|++|.+++.. ..+++..++.++.||+.||.|||++| |+||||||+|||++. ++.+||+
T Consensus 82 ~lv~e~~~~~~L~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~ 158 (271)
T 3dtc_A 82 CLVMEFARGGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT 158 (271)
T ss_dssp EEEEECCTTEEHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEEC
T ss_pred EEEEEcCCCCCHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEc
Confidence 999999999999999864 56999999999999999999999999 999999999999986 6789999
Q ss_pred eccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh
Q 002051 787 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY 866 (975)
Q Consensus 787 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~ 866 (975)
|||++...... ......||+.|+|||++.+..++.++|||||||++|+|++
T Consensus 159 Dfg~~~~~~~~-----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~ 209 (271)
T 3dtc_A 159 DFGLAREWHRT-----------------------------TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLT 209 (271)
T ss_dssp CCCC------------------------------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHH
T ss_pred cCCcccccccc-----------------------------cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHh
Confidence 99998653311 1123468999999999999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 867 GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 867 G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
|+.||.+.+.......+.......+....++..+.+||.+||+.||.+||| +.++++|
T Consensus 210 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~e~l~~ 267 (271)
T 3dtc_A 210 GEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPS----FTNILDQ 267 (271)
T ss_dssp CCCTTTTSCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred CCCCCCCCCHHHHHHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcC----HHHHHHH
Confidence 999999998888888888777777777778999999999999999999999 8888764
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=331.91 Aligned_cols=248 Identities=18% Similarity=0.245 Sum_probs=201.0
Q ss_pred ccccccCCCcccccccccCCceEEEEEEEe-----CCCeEEEEEEeccch-------------------------hcccc
Q 002051 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGV-------------------------MLNRN 711 (975)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~-----~t~~~vAiK~l~~~~-------------------------~~~~~ 711 (975)
..+.+..++|++.+.||+|+||.||+|.+. .+++.||||++.... +....
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 345667789999999999999999999987 467899999986431 11122
Q ss_pred ccCCeEEEEEeccCCCCHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcE
Q 002051 712 KTKTHVCLITDYCPGGELFLLLDRQP--------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHV 783 (975)
Q Consensus 712 ~~~~~~~lV~Ey~~ggsL~~~l~~~~--------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~v 783 (975)
.....+|+|||||++|+|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~ 177 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV 177 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCE
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeE
Confidence 25677899999999999999987521 1457899999999999999999999999999999999999999999
Q ss_pred EEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHH
Q 002051 784 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE 863 (975)
Q Consensus 784 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~e 863 (975)
||+|||++....... .........||+.|+|||++.+..++.++|||||||++|+
T Consensus 178 kl~Dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e 232 (322)
T 1p4o_A 178 KIGDFGMTRDIYETD-------------------------YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE 232 (322)
T ss_dssp EECCTTCCCGGGGGG-------------------------CEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred EECcCcccccccccc-------------------------ccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHH
Confidence 999999986543110 0011233467899999999999889999999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC------CCccCCCc
Q 002051 864 MLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH------PFFKGVNW 936 (975)
Q Consensus 864 ll~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H------p~f~~~~~ 936 (975)
|++ |..||.+.+.......+..... .+....++..+.+||.+||..||.+||| +.++++| ++|+.++|
T Consensus 233 l~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~e~l~~L~~~~~~~~~~~~~ 307 (322)
T 1p4o_A 233 IATLAEQPYQGLSNEQVLRFVMEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPS----FLEIISSIKEEMEPGFREVSF 307 (322)
T ss_dssp HHHTSCCTTTTSCHHHHHHHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHHHGGGSCTTHHHHCS
T ss_pred HHhcCCCccccCCHHHHHHHHHcCCc-CCCCCCCCHHHHHHHHHHcCCCcccCcC----HHHHHHHHHHhhccCCccccc
Confidence 999 8999999888887777766543 2334567899999999999999999999 6666654 77777666
Q ss_pred chh
Q 002051 937 ALV 939 (975)
Q Consensus 937 ~~~ 939 (975)
...
T Consensus 308 ~~~ 310 (322)
T 1p4o_A 308 YYS 310 (322)
T ss_dssp TTS
T ss_pred ccc
Confidence 543
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=327.61 Aligned_cols=239 Identities=24% Similarity=0.392 Sum_probs=188.7
Q ss_pred ccccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch----------------------------hcccccc
Q 002051 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV----------------------------MLNRNKT 713 (975)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~----------------------------~~~~~~~ 713 (975)
....+..++|++++.||+|+||.||+|.+. +++.||||++.... +......
T Consensus 21 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~ 99 (313)
T 3cek_A 21 QSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT 99 (313)
T ss_dssp CEEEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC
T ss_pred eeeeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeec
Confidence 344566778999999999999999999985 58899999985421 0111125
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 714 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 714 ~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
..++|+|||++ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||++..
T Consensus 100 ~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~ 175 (313)
T 3cek_A 100 DQYIYMVMECG-NIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQ 175 (313)
T ss_dssp SSEEEEEECCC-SEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC
T ss_pred CCEEEEEEecC-CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeecccccc
Confidence 67889999954 88999999875 5689999999999999999999999999999999999996 58999999999965
Q ss_pred cCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-----------CCCCChhHHHHHHHHHH
Q 002051 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----------AGHTSAVDWWALGILLY 862 (975)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----------~~~~~k~DIWSLG~il~ 862 (975)
...... ........||+.|+|||++.+ ..++.++|||||||++|
T Consensus 176 ~~~~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~ 230 (313)
T 3cek_A 176 MQPDTT-------------------------SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY 230 (313)
T ss_dssp ---------------------------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHH
T ss_pred ccCccc-------------------------cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHH
Confidence 432110 011234578999999999976 46788999999999999
Q ss_pred HHHhCCCCCCCCC-HHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 863 EMLYGYTPFRGKT-RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 863 ell~G~~Pf~~~~-~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
+|++|..||.... ....+..+.......+.....+..+.+||.+||..||.+||| +.++|+||||+..
T Consensus 231 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~h~~~~~~ 299 (313)
T 3cek_A 231 YMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRIS----IPELLAHPYVQIQ 299 (313)
T ss_dssp HHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCC----HHHHHTSHHHHCC
T ss_pred HHHhCCCchhhHHHHHHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcC----HHHHhcCccccCC
Confidence 9999999998753 344555555555444444556889999999999999999999 9999999999754
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-35 Score=316.97 Aligned_cols=226 Identities=19% Similarity=0.300 Sum_probs=192.5
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------cccccc--CC
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKT--KT 715 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~--~~ 715 (975)
..+..++|++++.||+|+||.||+|.+. ++.||+|++..... ...... ..
T Consensus 5 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 82 (271)
T 3kmu_A 5 SGIDFKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82 (271)
T ss_dssp CCCCGGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSS
T ss_pred CCCCHHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCC
Confidence 4567889999999999999999999984 88999999875320 111112 37
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~g--IiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
++|+|||||+||+|.+++.......+++..+..++.||+.||.|||++| |+||||||+|||++.++.++|+|||++..
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 83 HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp SCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred CeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceee
Confidence 8899999999999999998865557999999999999999999999999 99999999999999999999999998743
Q ss_pred cCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCC---hhHHHHHHHHHHHHHhCCCC
Q 002051 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS---AVDWWALGILLYEMLYGYTP 870 (975)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~---k~DIWSLG~il~ell~G~~P 870 (975)
.. .....||+.|+|||++.+..++. ++|||||||++|+|++|..|
T Consensus 163 ~~--------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p 210 (271)
T 3kmu_A 163 FQ--------------------------------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVP 210 (271)
T ss_dssp TS--------------------------------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCT
T ss_pred ec--------------------------------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 21 12346899999999998766554 89999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 871 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 871 f~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
|.+.+.......+.......+.+..++..+.+||.+||+.||.+||| ++++++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~ 263 (271)
T 3kmu_A 211 FADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPK----FDMIVP 263 (271)
T ss_dssp TTTSCHHHHHHHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred ccccChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 99998888888888776666666778999999999999999999999 777764
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-35 Score=333.80 Aligned_cols=235 Identities=22% Similarity=0.320 Sum_probs=193.6
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCC-------CeEEEEEEeccch--------------------------hccc
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGS-------GQYFAMKAMDKGV--------------------------MLNR 710 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t-------~~~vAiK~l~~~~--------------------------~~~~ 710 (975)
+.+..++|.+.+.||+|+||.||+|.+..+ +..||+|++.... +...
T Consensus 64 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~ 143 (382)
T 3tt0_A 64 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA 143 (382)
T ss_dssp TBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheee
Confidence 456778999999999999999999998643 3689999986531 1111
Q ss_pred cccCCeEEEEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 002051 711 NKTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 776 (975)
Q Consensus 711 ~~~~~~~~lV~Ey~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NIL 776 (975)
......+|+|||||++|+|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||
T Consensus 144 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 144 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 223 (382)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEE
T ss_pred eccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEE
Confidence 225677899999999999999998753 235999999999999999999999999999999999999
Q ss_pred EecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHH
Q 002051 777 LQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWA 856 (975)
Q Consensus 777 l~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWS 856 (975)
++.++.+||+|||+++....... ........||+.|+|||++.+..++.++||||
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~-------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Diws 278 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDY-------------------------YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 278 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCT-------------------------TCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHH
T ss_pred EcCCCcEEEcccCcccccccccc-------------------------cccccCCCCCcceeCHHHhcCCCCCchhHHHH
Confidence 99999999999999975432110 01123346788999999999999999999999
Q ss_pred HHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 857 LGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 857 LG~il~ell~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
|||++|+|++ |..||.+.+..+....+.... .......++..+.+||.+||+.||.+||| +.+|+++
T Consensus 279 lG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~ell~~ 346 (382)
T 3tt0_A 279 FGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH-RMDKPSNCTNELYMMMRDCWHAVPSQRPT----FKQLVED 346 (382)
T ss_dssp HHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC-CCCCCSSCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCCCccCCHHHHHHHHHHcCCChhhCcC----HHHHHHH
Confidence 9999999999 999999988877776665543 33444568899999999999999999999 7777654
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-36 Score=334.39 Aligned_cols=241 Identities=24% Similarity=0.329 Sum_probs=173.7
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------------------hccccccCCeE
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------------------MLNRNKTKTHV 717 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------------~~~~~~~~~~~ 717 (975)
+.+..++|++++.||+|+||.||+|.++.+|+.||||++.... +.........+
T Consensus 17 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~ 96 (327)
T 3aln_A 17 WDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDC 96 (327)
T ss_dssp ECCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEE
T ss_pred cccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCce
Confidence 4577889999999999999999999999999999999986531 01111256789
Q ss_pred EEEEeccCCCCHHHHHhh---CCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 718 CLITDYCPGGELFLLLDR---QPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~---~~~~~l~~~~i~~i~~qIl~aL~yLH~~-gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
|+||||+. ++|.+++.. .....+++..+..++.|++.||.|||++ ||+||||||+|||++.++.+||+|||++..
T Consensus 97 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 175 (327)
T 3aln_A 97 WICMELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQ 175 (327)
T ss_dssp EEEECCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred EEEEeecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence 99999996 588887763 2246799999999999999999999999 999999999999999999999999999865
Q ss_pred cCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhh----cCCCCCChhHHHHHHHHHHHHHhCCC
Q 002051 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII----AGAGHTSAVDWWALGILLYEMLYGYT 869 (975)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l----~~~~~~~k~DIWSLG~il~ell~G~~ 869 (975)
.... .......||+.|+|||++ .+..++.++|||||||++|+|++|..
T Consensus 176 ~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~ 227 (327)
T 3aln_A 176 LVDS----------------------------IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRF 227 (327)
T ss_dssp ----------------------------------------------------------CCSHHHHHHHHHHHHHHHHSCC
T ss_pred cccc----------------------------cccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCC
Confidence 4311 011234689999999998 45678999999999999999999999
Q ss_pred CCCCCCHH-HHHHHHHhcCC-CCC--CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcc
Q 002051 870 PFRGKTRQ-KTFANILHKDL-KFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 937 (975)
Q Consensus 870 Pf~~~~~~-~~~~~i~~~~~-~~p--~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~ 937 (975)
||.+.... ..+..+..+.. .++ ....++..+.+||.+||..||.+||| +.+|++||||...++.
T Consensus 228 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~hp~~~~~~~~ 295 (327)
T 3aln_A 228 PYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPK----YKELLKHPFILMYEER 295 (327)
T ss_dssp CSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCC----HHHHTTSHHHHHHHHS
T ss_pred CCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcC----HHHHHhChHHHHhHhh
Confidence 99875432 22222222211 111 12357899999999999999999999 9999999999865543
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-35 Score=323.87 Aligned_cols=234 Identities=23% Similarity=0.319 Sum_probs=196.4
Q ss_pred cccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-----------------------hccccccCCeEEE
Q 002051 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-----------------------MLNRNKTKTHVCL 719 (975)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-----------------------~~~~~~~~~~~~l 719 (975)
.+.+..++|++.+.||+|+||.||+|.+..+++.||+|++.... +.........+|+
T Consensus 7 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 86 (288)
T 3kfa_A 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86 (288)
T ss_dssp TTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEE
T ss_pred cccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEE
Confidence 45567889999999999999999999999999999999986542 1122236678999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
|||||+|++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 87 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 165 (288)
T 3kfa_A 87 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT- 165 (288)
T ss_dssp EEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS-
T ss_pred EEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCc-
Confidence 9999999999999988766779999999999999999999999999999999999999999999999999986543211
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK 878 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~ 878 (975)
........+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+.+...
T Consensus 166 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~ 220 (288)
T 3kfa_A 166 -------------------------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 220 (288)
T ss_dssp -------------------------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred -------------------------cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 011223457889999999999999999999999999999999 999999877766
Q ss_pred HHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 879 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 879 ~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
....+.. ....+....++..+.+||.+||..||.+||| +.++++
T Consensus 221 ~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~~~~ 264 (288)
T 3kfa_A 221 VYELLEK-DYRMERPEGCPEKVYELMRACWQWNPSDRPS----FAEIHQ 264 (288)
T ss_dssp HHHHHHT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred HHHHHhc-cCCCCCCCCCCHHHHHHHHHHhCCChhhCcC----HHHHHH
Confidence 6555544 3444455668899999999999999999999 666654
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-35 Score=324.24 Aligned_cols=250 Identities=26% Similarity=0.450 Sum_probs=186.3
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------ccc-------------------------cc
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------LNR-------------------------NK 712 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------~~~-------------------------~~ 712 (975)
++|++++.||+|+||.||+|++..+++.||||++....- +.. ..
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 85 (303)
T 1zy4_A 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVK 85 (303)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------
T ss_pred ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccc
Confidence 479999999999999999999999999999999864310 000 01
Q ss_pred cCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCC
Q 002051 713 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 792 (975)
Q Consensus 713 ~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~ 792 (975)
....+|+|||||+|++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 164 (303)
T 1zy4_A 86 KKSTLFIQMEYCENGTLYDLIHSE-NLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164 (303)
T ss_dssp CEEEEEEEEECCCSCBHHHHHHHS-CGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCS
T ss_pred cCCceEEEEecCCCCCHHHhhhcc-ccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchh
Confidence 246789999999999999999864 3467889999999999999999999999999999999999999999999999997
Q ss_pred ccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCC
Q 002051 793 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPF 871 (975)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf 871 (975)
............ ...............||+.|+|||++.+. .++.++|||||||++|+|++ ||
T Consensus 165 ~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~ 228 (303)
T 1zy4_A 165 NVHRSLDILKLD-------------SQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PF 228 (303)
T ss_dssp CTTC--------------------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CC
T ss_pred hcccccchhccc-------------cccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---cc
Confidence 654221100000 00000011223456799999999999865 68999999999999999998 55
Q ss_pred CC-CCHHHHHHHHHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchh
Q 002051 872 RG-KTRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 939 (975)
Q Consensus 872 ~~-~~~~~~~~~i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~ 939 (975)
.. .+.......+......+|.. ...+..+.+||.+||+.||.+||| +.++++||||+...+...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~ll~h~~~~~~~~~~~ 295 (303)
T 1zy4_A 229 STGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPG----ARTLLNSGWLPVKHQDEV 295 (303)
T ss_dssp SSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCC----HHHHHHSSCSCCCCHHHH
T ss_pred CCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcC----HHHHhCCCCcCCCChHHH
Confidence 43 23344455555544444433 446778999999999999999999 999999999987766543
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-35 Score=319.39 Aligned_cols=231 Identities=23% Similarity=0.310 Sum_probs=192.2
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------ccccccCCeEEEEE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------~~~~~~~~~~~lV~ 721 (975)
.+..++|++++.||+|+||.||+|.+. ++..||+|++..... .........+|+||
T Consensus 4 ~l~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (268)
T 3sxs_A 4 ELKREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVT 82 (268)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred EechhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEE
Confidence 466789999999999999999999875 577899999875421 11223667899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
|||++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 83 e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~--- 158 (268)
T 3sxs_A 83 EYISNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ--- 158 (268)
T ss_dssp ECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC---
T ss_pred EccCCCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhh---
Confidence 999999999999764 2459999999999999999999999999999999999999999999999999986543211
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTF 880 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~ 880 (975)
........+|+.|+|||++.+..++.++|||||||++|+|++ |..||.........
T Consensus 159 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~ 215 (268)
T 3sxs_A 159 -----------------------YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVV 215 (268)
T ss_dssp -----------------------EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH
T ss_pred -----------------------hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHH
Confidence 011123456788999999999889999999999999999998 99999998888877
Q ss_pred HHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 881 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 881 ~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
..+..... ...+...+..+.+||.+||+.||.+||| +.++++|
T Consensus 216 ~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~ll~~ 258 (268)
T 3sxs_A 216 LKVSQGHR-LYRPHLASDTIYQIMYSCWHELPEKRPT----FQQLLSS 258 (268)
T ss_dssp HHHHTTCC-CCCCTTSCHHHHHHHHHTTCSSGGGSCC----HHHHHHH
T ss_pred HHHHcCCC-CCCCCcChHHHHHHHHHHcCCChhhCcC----HHHHHHH
Confidence 77766543 2333457889999999999999999999 8888765
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-35 Score=327.49 Aligned_cols=237 Identities=22% Similarity=0.322 Sum_probs=195.5
Q ss_pred cccccCCCcccccccccCCceEEEEEEE-----eCCCeEEEEEEeccch--------------------------hcccc
Q 002051 663 GEQINLQHFRPIKPLGSGDTGSVHLVEL-----CGSGQYFAMKAMDKGV--------------------------MLNRN 711 (975)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~-----~~t~~~vAiK~l~~~~--------------------------~~~~~ 711 (975)
.+.+..++|++.+.||+|+||.||+|.+ ..+++.||+|++.... +....
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 96 (313)
T 1t46_A 17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGAC 96 (313)
T ss_dssp GGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred ccccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEE
Confidence 3457778999999999999999999996 3567899999986431 01111
Q ss_pred ccCCeEEEEEeccCCCCHHHHHhhCCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 002051 712 KTKTHVCLITDYCPGGELFLLLDRQPT----------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 775 (975)
Q Consensus 712 ~~~~~~~lV~Ey~~ggsL~~~l~~~~~----------------~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NI 775 (975)
......|+|||||++|+|.+++..... ..+++..+..++.||+.||.|||++||+||||||+||
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Ni 176 (313)
T 1t46_A 97 TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNI 176 (313)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred ecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceE
Confidence 256778999999999999999987532 2489999999999999999999999999999999999
Q ss_pred EEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHH
Q 002051 776 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 855 (975)
Q Consensus 776 Ll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIW 855 (975)
|++.++.+||+|||++........ ........||+.|+|||++.+..++.++|||
T Consensus 177 l~~~~~~~kl~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 231 (313)
T 1t46_A 177 LLTHGRITKICDFGLARDIKNDSN-------------------------YVVKGNARLPVKWMAPESIFNCVYTFESDVW 231 (313)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTT-------------------------SEECSSSEECGGGCCHHHHHHCCCCHHHHHH
T ss_pred EEcCCCCEEEcccccccccccccc-------------------------ceeccCCCCcceeeChHHhcCCCCChHHHHH
Confidence 999999999999999866432110 0112334678899999999999999999999
Q ss_pred HHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 856 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 856 SLG~il~ell~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
||||++|+|++ |..||.+......+..........+....++..+.+||.+||..||.+||| +.+++++
T Consensus 232 slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~~ 301 (313)
T 1t46_A 232 SYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPT----FKQIVQL 301 (313)
T ss_dssp HHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcC----HHHHHHH
Confidence 99999999998 999998877666666666665565556678999999999999999999999 7777653
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-35 Score=324.46 Aligned_cols=233 Identities=19% Similarity=0.247 Sum_probs=184.8
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc-----------------------cccccCCeEEEEEecc
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----------------------NRNKTKTHVCLITDYC 724 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~-----------------------~~~~~~~~~~lV~Ey~ 724 (975)
.++|++.+.||+|+||.||+|++..+++.||||++...... .........|+||||+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 87 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 87 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence 56899999999999999999999999999999987643210 1112567789999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe---cCCcEEEeeccCCCccCCCCCCC
Q 002051 725 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ---GNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 725 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~---~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
+++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..........
T Consensus 88 -~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (296)
T 3uzp_A 88 -GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ 165 (296)
T ss_dssp -CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred -CCCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccccc
Confidence 99999999754 35699999999999999999999999999999999999994 78899999999997654221100
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC---HHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT---RQK 878 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~---~~~ 878 (975)
...........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.. ...
T Consensus 166 --------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 225 (296)
T 3uzp_A 166 --------------------HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ 225 (296)
T ss_dssp --------------------BCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS
T ss_pred --------------------ccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhh
Confidence 011122345689999999999999999999999999999999999999998632 223
Q ss_pred HHHHHHhcCCCCC---CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 879 TFANILHKDLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 879 ~~~~i~~~~~~~p---~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
.+..+.......+ ....++..+.+||.+||+.||.+||| +.+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~l~ 272 (296)
T 3uzp_A 226 KYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPD----YSYLR 272 (296)
T ss_dssp HHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCC----HHHHH
T ss_pred hhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCC----HHHHH
Confidence 3334433322222 11347889999999999999999999 55554
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=338.06 Aligned_cols=252 Identities=17% Similarity=0.198 Sum_probs=185.9
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCC-----CeEEEEEEeccchh--------cc-----------------------
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVM--------LN----------------------- 709 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t-----~~~vAiK~l~~~~~--------~~----------------------- 709 (975)
+..++|++++.||+|+||.||+|.+..+ ++.||||++..... ..
T Consensus 32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv 111 (364)
T 3op5_A 32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVP 111 (364)
T ss_dssp TTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSC
T ss_pred cCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCC
Confidence 3456899999999999999999999765 58899999764320 00
Q ss_pred ----c----cccCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe--c
Q 002051 710 ----R----NKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ--G 779 (975)
Q Consensus 710 ----~----~~~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~--~ 779 (975)
. .....++||||||| |++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .
T Consensus 112 ~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 112 KYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp CEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSC
T ss_pred eEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCC
Confidence 0 00125689999999 99999999874 35699999999999999999999999999999999999999 8
Q ss_pred CCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHH
Q 002051 780 NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGI 859 (975)
Q Consensus 780 ~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~ 859 (975)
++.+||+|||+++.+....... ..........+||+.|+|||++.+..++.++|||||||
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~--------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~ 249 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHK--------------------AYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGY 249 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCC--------------------CSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHH
T ss_pred CCeEEEEECCcceecccCCccc--------------------ccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHH
Confidence 8999999999997654221100 00112234567999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHh----cCC------CCCCCCCCcHHHHHHHHHhcccCccccCCChhhHH---HHH
Q 002051 860 LLYEMLYGYTPFRGKTRQKTFANILH----KDL------KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN---EIK 926 (975)
Q Consensus 860 il~ell~G~~Pf~~~~~~~~~~~i~~----~~~------~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~---elL 926 (975)
++|+|++|+.||.+......+..... ... .+ ....++.++.+||..||..||.+||++.+..+ +++
T Consensus 250 ~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~ 328 (364)
T 3op5_A 250 CMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCF-PAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGL 328 (364)
T ss_dssp HHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHS-CTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhc-ccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Confidence 99999999999986332222211111 000 01 11346889999999999999999999433211 111
Q ss_pred ---cCCCccCCCcchhh
Q 002051 927 ---KHPFFKGVNWALVR 940 (975)
Q Consensus 927 ---~Hp~f~~~~~~~~~ 940 (975)
..++...++|....
T Consensus 329 ~~~~~~~~~~~dw~~~~ 345 (364)
T 3op5_A 329 KAIGSKDDGKLDLSVVE 345 (364)
T ss_dssp HHTTCCCCCCCCC----
T ss_pred HHcCCCcCCccceEecc
Confidence 34666778887554
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-35 Score=330.07 Aligned_cols=234 Identities=21% Similarity=0.292 Sum_probs=192.8
Q ss_pred ccccCCCcccccccccCCceEEEEEEEe-----CCCeEEEEEEeccch-------------------------hcccccc
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGV-------------------------MLNRNKT 713 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~-----~t~~~vAiK~l~~~~-------------------------~~~~~~~ 713 (975)
..+..++|++++.||+|+||.||+|++. .+++.||||+++... +......
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 3466789999999999999999999997 456899999987531 1112225
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCC
Q 002051 714 KTHVCLITDYCPGGELFLLLDRQP----------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLK 771 (975)
Q Consensus 714 ~~~~~lV~Ey~~ggsL~~~l~~~~----------------------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIK 771 (975)
...+|+|||||++|+|.+++.... ...+++..++.++.||+.||.|||++||+|||||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlk 201 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLA 201 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 678899999999999999998742 1568999999999999999999999999999999
Q ss_pred CCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCCh
Q 002051 772 PENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSA 851 (975)
Q Consensus 772 p~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k 851 (975)
|+|||++.++.+||+|||++....... .........||+.|+|||++.+..++.+
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~-------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~ 256 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSAD-------------------------YYKADGNDAIPIRWMPPESIFYNRYTTE 256 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGG-------------------------CBC----CCBCGGGCCHHHHHHCCCCHH
T ss_pred cceEEECCCCeEEEeecCCCcccccCc-------------------------cccccCCCcccceecChhhhccCCcCcc
Confidence 999999999999999999986543110 0011234568899999999999889999
Q ss_pred hHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 852 VDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 852 ~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
+|||||||++|+|++ |..||.+.+..+....+..+... +.+..++..+.+||.+||..||.+||| +.++++
T Consensus 257 ~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~~~~ 328 (343)
T 1luf_A 257 SDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNIL-ACPENCPLELYNLMRLCWSKLPADRPS----FCSIHR 328 (343)
T ss_dssp HHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred cccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCcC-CCCCCCCHHHHHHHHHHcccCcccCCC----HHHHHH
Confidence 999999999999998 99999998888888777765442 333467899999999999999999999 777764
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-35 Score=326.45 Aligned_cols=237 Identities=20% Similarity=0.279 Sum_probs=194.0
Q ss_pred ccccccCCCcccccccccCCceEEEEEEEe-----CCCeEEEEEEeccch-------------------------hcccc
Q 002051 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGV-------------------------MLNRN 711 (975)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~-----~t~~~vAiK~l~~~~-------------------------~~~~~ 711 (975)
..+.+..++|.+.+.||+|+||.||+|.+. .+++.||+|++.... +....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~ 95 (314)
T 2ivs_A 16 PKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGAC 95 (314)
T ss_dssp TTTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred cccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEE
Confidence 445677889999999999999999999984 456899999986531 11122
Q ss_pred ccCCeEEEEEeccCCCCHHHHHhhCCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecC
Q 002051 712 KTKTHVCLITDYCPGGELFLLLDRQPT----------------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRD 769 (975)
Q Consensus 712 ~~~~~~~lV~Ey~~ggsL~~~l~~~~~----------------------~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrD 769 (975)
.....+|+|||||+|++|.+++..... ..+++..++.++.||+.||.|||++||+|||
T Consensus 96 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~d 175 (314)
T 2ivs_A 96 SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRD 175 (314)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred ecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccc
Confidence 356778999999999999999987432 3489999999999999999999999999999
Q ss_pred CCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCC
Q 002051 770 LKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT 849 (975)
Q Consensus 770 IKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~ 849 (975)
|||+|||++.++.+||+|||++........ ........+|+.|+|||++.+..++
T Consensus 176 ikp~NIli~~~~~~kl~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~ 230 (314)
T 2ivs_A 176 LAARNILVAEGRKMKISDFGLSRDVYEEDS-------------------------YVKRSQGRIPVKWMAIESLFDHIYT 230 (314)
T ss_dssp CSGGGEEEETTTEEEECCCTTCEECTTTSC-------------------------EECSSCCCSCGGGCCHHHHHHCEEC
T ss_pred cchheEEEcCCCCEEEcccccccccccccc-------------------------ceeccCCCCcccccChhhhcCCCcC
Confidence 999999999999999999999865432110 0112234578899999999998899
Q ss_pred ChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 850 SAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 850 ~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
.++|||||||++|+|++ |..||.+.........+.... ..+....++..+.+||.+||+.||.+||| +.+++++
T Consensus 231 ~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~l~~~ 305 (314)
T 2ivs_A 231 TQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGH-RMERPDNCSEEMYRLMLQCWKQEPDKRPV----FADISKD 305 (314)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCC-cCCCCccCCHHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence 99999999999999999 999999888777666555443 33444568899999999999999999999 7777654
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-35 Score=324.12 Aligned_cols=235 Identities=20% Similarity=0.356 Sum_probs=182.9
Q ss_pred ccccCCCcccccccccCCceEEEEEE----EeCCCeEEEEEEeccchh------------cccc--------------cc
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVE----LCGSGQYFAMKAMDKGVM------------LNRN--------------KT 713 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~----~~~t~~~vAiK~l~~~~~------------~~~~--------------~~ 713 (975)
..+..++|++++.||+|+||+||+|+ +..+++.||||++..... +... ..
T Consensus 5 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 84 (295)
T 3ugc_A 5 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 84 (295)
T ss_dssp -CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHH
T ss_pred CcCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 35667899999999999999999999 567899999999865310 0000 12
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 714 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 714 ~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
..++|+|||||++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus 85 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~ 163 (295)
T 3ugc_A 85 RRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 163 (295)
T ss_dssp HTSCEEEEECCTTCBHHHHHHHC-GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred CCceEEEEEeCCCCCHHHHHHhc-ccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCccccc
Confidence 35689999999999999999875 23599999999999999999999999999999999999999999999999999976
Q ss_pred cCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCC
Q 002051 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 873 (975)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~ 873 (975)
....... ........+++.|+|||++.+..++.++|||||||++|+|++|..||..
T Consensus 164 ~~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~ 219 (295)
T 3ugc_A 164 LPQDKEF------------------------FKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219 (295)
T ss_dssp ------------------------------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCS
T ss_pred ccCCcce------------------------eeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCC
Confidence 5321110 0112234577889999999999999999999999999999999999865
Q ss_pred CCHHH---------------HHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 874 KTRQK---------------TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 874 ~~~~~---------------~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
..... .....+......+.+..++..+.+||.+||+.||.+||| +.++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~el~~ 284 (295)
T 3ugc_A 220 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPS----FRDLAL 284 (295)
T ss_dssp HHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCC----HHHHHH
T ss_pred ChHHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCC----HHHHHH
Confidence 32210 112223334455556678999999999999999999999 666653
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=336.75 Aligned_cols=234 Identities=20% Similarity=0.296 Sum_probs=192.1
Q ss_pred cccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-------------------------hccccccCCeE
Q 002051 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------------------MLNRNKTKTHV 717 (975)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------------------~~~~~~~~~~~ 717 (975)
.+.+..++|++.+.||+|+||.||+|.++.+++.||||+++... +.........+
T Consensus 108 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 187 (377)
T 3cbl_A 108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPI 187 (377)
T ss_dssp TTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred ccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCc
Confidence 35677889999999999999999999999999999999986431 01111256678
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|||||||++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 188 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~ 266 (377)
T 3cbl_A 188 YIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADG 266 (377)
T ss_dssp EEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred EEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence 9999999999999999763 245899999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 876 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~ 876 (975)
.. ........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.+.
T Consensus 267 ~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~ 321 (377)
T 3cbl_A 267 VY-------------------------AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN 321 (377)
T ss_dssp EE-------------------------ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH
T ss_pred ce-------------------------eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 00 001112345778999999998889999999999999999998 9999999887
Q ss_pred HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 877 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 877 ~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
......+..+ ..++.+..++..+.+||.+||+.||.+||| +.+|++
T Consensus 322 ~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~Rps----~~~i~~ 367 (377)
T 3cbl_A 322 QQTREFVEKG-GRLPCPELCPDAVFRLMEQCWAYEPGQRPS----FSTIYQ 367 (377)
T ss_dssp HHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred HHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCCchhCcC----HHHHHH
Confidence 7766655543 345555668899999999999999999999 666653
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-35 Score=327.09 Aligned_cols=236 Identities=27% Similarity=0.416 Sum_probs=180.8
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch--------------------------hccccccCCeEE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------------------MLNRNKTKTHVC 718 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~--------------------------~~~~~~~~~~~~ 718 (975)
.+..++|++++.||+|+||.||+|.++.+|+.||||++.... +.........+|
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 100 (318)
T 2dyl_A 21 QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVF 100 (318)
T ss_dssp ECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred hhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEE
Confidence 456789999999999999999999999999999999986531 111122567899
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~-gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
+||||+ ++.+..+.... ...+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++......
T Consensus 101 lv~e~~-~~~~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (318)
T 2dyl_A 101 IAMELM-GTCAEKLKKRM-QGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD 178 (318)
T ss_dssp EEECCC-SEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred EEEecc-CCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence 999999 66666666542 35699999999999999999999995 9999999999999999999999999998553311
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhc-----CCCCCChhHHHHHHHHHHHHHhCCCCCC
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFR 872 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~~~k~DIWSLG~il~ell~G~~Pf~ 872 (975)
.......||+.|+|||++. +..++.++|||||||++|+|++|..||.
T Consensus 179 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 230 (318)
T 2dyl_A 179 ----------------------------KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYK 230 (318)
T ss_dssp ------------------------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred ----------------------------ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCC
Confidence 1112346899999999994 4568889999999999999999999998
Q ss_pred C-CCHHHHHHHHHhcCCC-CCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 873 G-KTRQKTFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 873 ~-~~~~~~~~~i~~~~~~-~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
. ......+..+...... ++....++..+.+||.+||..||.+||| +++|++||||++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~h~~~~~~ 290 (318)
T 2dyl_A 231 NCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPK----YNKLLEHSFIKRY 290 (318)
T ss_dssp TCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCC----HHHHTTSHHHHHH
T ss_pred CCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcC----HHHHhhCHHHHhc
Confidence 7 4455666666665433 3444568899999999999999999999 9999999999854
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-35 Score=321.04 Aligned_cols=231 Identities=26% Similarity=0.373 Sum_probs=181.7
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCC---CeEEEEEEeccch-------------------------hccccccCC
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGV-------------------------MLNRNKTKT 715 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t---~~~vAiK~l~~~~-------------------------~~~~~~~~~ 715 (975)
..+..++|++.+.||+|+||.||+|.+..+ +..||+|++.... +... ...+
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~-~~~~ 88 (281)
T 1mp8_A 10 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITEN 88 (281)
T ss_dssp CBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEE-ECSS
T ss_pred eEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEE-EccC
Confidence 456678999999999999999999999654 5679999976421 0000 1456
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
.+|+||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (281)
T 1mp8_A 89 PVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 167 (281)
T ss_dssp SCEEEEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred ccEEEEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccC
Confidence 789999999999999999864 3469999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 874 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~ 874 (975)
.... .......+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus 168 ~~~~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~ 221 (281)
T 1mp8_A 168 DSTY--------------------------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 221 (281)
T ss_dssp -------------------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred cccc--------------------------cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcC
Confidence 2110 01123356789999999998899999999999999999996 99999988
Q ss_pred CHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 875 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
...+.+..+.... ..+....++..+.+||.+||..||.+||| +.++++
T Consensus 222 ~~~~~~~~i~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~l~~ 269 (281)
T 1mp8_A 222 KNNDVIGRIENGE-RLPMPPNCPPTLYSLMTKCWAYDPSRRPR----FTELKA 269 (281)
T ss_dssp CGGGHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred CHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHccCChhhCcC----HHHHHH
Confidence 8877777776543 33444568899999999999999999999 777765
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-35 Score=325.97 Aligned_cols=228 Identities=29% Similarity=0.439 Sum_probs=182.5
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh----------------------------------cccc
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM----------------------------------LNRN 711 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~----------------------------------~~~~ 711 (975)
...++|++.+.||+|+||.||+|.+..+++.||||++..... ....
T Consensus 28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 346789999999999999999999999999999999864321 0111
Q ss_pred ccCCeEEEEEec-cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe-cCCcEEEeecc
Q 002051 712 KTKTHVCLITDY-CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFD 789 (975)
Q Consensus 712 ~~~~~~~lV~Ey-~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~-~~g~vkL~DFG 789 (975)
......|+|||| +.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 108 ~~~~~~~~v~e~~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg 185 (312)
T 2iwi_A 108 ETQEGFMLVLERPLPAQDLFDYITEK--GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG 185 (312)
T ss_dssp -----CEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCS
T ss_pred ecCCeEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcc
Confidence 245677999999 7899999999874 4699999999999999999999999999999999999999 88999999999
Q ss_pred CCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCC-ChhHHHHHHHHHHHHHhCC
Q 002051 790 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT-SAVDWWALGILLYEMLYGY 868 (975)
Q Consensus 790 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~-~k~DIWSLG~il~ell~G~ 868 (975)
++...... ......||+.|+|||++.+..+. .++|||||||++|+|++|+
T Consensus 186 ~~~~~~~~-----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~ 236 (312)
T 2iwi_A 186 SGALLHDE-----------------------------PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGD 236 (312)
T ss_dssp SCEECCSS-----------------------------CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSS
T ss_pred hhhhcccC-----------------------------cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCC
Confidence 98654311 12245689999999999876664 4899999999999999999
Q ss_pred CCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCc
Q 002051 869 TPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936 (975)
Q Consensus 869 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~ 936 (975)
.||.... .+......++ ..++..+.+||.+||..||++||| +.++++||||+....
T Consensus 237 ~pf~~~~------~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rps----~~e~l~~~~~~~~~~ 292 (312)
T 2iwi_A 237 IPFERDQ------EILEAELHFP--AHVSPDCCALIRRCLAPKPSSRPS----LEEILLDPWMQTPAE 292 (312)
T ss_dssp CSCCSHH------HHHHTCCCCC--TTSCHHHHHHHHHHTCSSTTTSCC----HHHHHHSTTTCC---
T ss_pred CCCCChH------HHhhhccCCc--ccCCHHHHHHHHHHccCChhhCcC----HHHHhcChhhcCchh
Confidence 9997532 2334444443 457889999999999999999999 999999999987543
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-35 Score=315.06 Aligned_cols=232 Identities=21% Similarity=0.352 Sum_probs=192.8
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------ccccccCCeEEEE
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------LNRNKTKTHVCLI 720 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------~~~~~~~~~~~lV 720 (975)
+.++.++|++.+.||+|+||.||+|.+. +++.||+|++..... .........+|+|
T Consensus 3 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (267)
T 3t9t_A 3 WVIDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 81 (267)
T ss_dssp CBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEE
T ss_pred eEEchhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEE
Confidence 4567789999999999999999999986 678899999875421 1112256778999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 800 (975)
|||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 82 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~--- 157 (267)
T 3t9t_A 82 TEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--- 157 (267)
T ss_dssp ECCCTTCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH---
T ss_pred EeCCCCCcHHHHHhhC-cccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEcccccccccccc---
Confidence 9999999999999864 346899999999999999999999999999999999999999999999999998653210
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 879 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~ 879 (975)
.........|++.|+|||++.+..++.++|||||||++|+|++ |..||.+.+....
T Consensus 158 -----------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~ 214 (267)
T 3t9t_A 158 -----------------------QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV 214 (267)
T ss_dssp -----------------------HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH
T ss_pred -----------------------cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHH
Confidence 0011223457889999999998889999999999999999999 9999999888887
Q ss_pred HHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 880 ~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
...+.... ....+...+..+.+||.+||..||.+||| +.+++++
T Consensus 215 ~~~i~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~ll~~ 258 (267)
T 3t9t_A 215 VEDISTGF-RLYKPRLASTHVYQIMNHCWRERPEDRPA----FSRLLRQ 258 (267)
T ss_dssp HHHHHTTC-CCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HHHHhcCC-cCCCCccCcHHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence 77776653 23334457889999999999999999999 7777753
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-35 Score=340.37 Aligned_cols=229 Identities=23% Similarity=0.378 Sum_probs=191.3
Q ss_pred cccccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc----------------------ccc-ccCCeE
Q 002051 661 DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML----------------------NRN-KTKTHV 717 (975)
Q Consensus 661 ~~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~----------------------~~~-~~~~~~ 717 (975)
...+.+..++|++++.||+|+||.||+|.+. |+.||||+++..... ... .....+
T Consensus 185 ~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 262 (450)
T 1k9a_A 185 RSGWALNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL 262 (450)
T ss_dssp HTTCBCCGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCE
T ss_pred ccccccChHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCce
Confidence 4567888999999999999999999999884 789999998764211 111 133479
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|||||||++|+|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 263 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~- 341 (450)
T 1k9a_A 263 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS- 341 (450)
T ss_dssp EEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC--
T ss_pred EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccc-
Confidence 9999999999999999876555689999999999999999999999999999999999999999999999999864321
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 876 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~ 876 (975)
......+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.+.
T Consensus 342 -----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~ 392 (450)
T 1k9a_A 342 -----------------------------TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL 392 (450)
T ss_dssp ----------------------------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCT
T ss_pred -----------------------------cccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 0112356889999999999999999999999999999998 9999998877
Q ss_pred HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 877 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 877 ~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
.+....+..+ ..++.+..++..+.+||.+||+.||.+||| +.+|+
T Consensus 393 ~~~~~~i~~~-~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt----~~~l~ 437 (450)
T 1k9a_A 393 KDVVPRVEKG-YKMDAPDGCPPAVYDVMKNCWHLDAATRPT----FLQLR 437 (450)
T ss_dssp TTHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHH
T ss_pred HHHHHHHHcC-CCCCCCCcCCHHHHHHHHHHcCCChhHCcC----HHHHH
Confidence 7777666554 344555668999999999999999999999 65554
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-35 Score=342.02 Aligned_cols=233 Identities=22% Similarity=0.345 Sum_probs=192.6
Q ss_pred ccccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------ccc-----------cccCCeEEE
Q 002051 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------LNR-----------NKTKTHVCL 719 (975)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------~~~-----------~~~~~~~~l 719 (975)
..+.+..++|++.+.||+|+||.||+|.+. ++..||||+++.... +.. ......+||
T Consensus 181 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~l 259 (454)
T 1qcf_A 181 DAWEIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYI 259 (454)
T ss_dssp TCSBCCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEE
T ss_pred cceeechHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccEE
Confidence 346778889999999999999999999985 467899999875421 000 013567899
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
|||||++|+|.+++.......++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 260 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~- 338 (454)
T 1qcf_A 260 ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE- 338 (454)
T ss_dssp EECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH-
T ss_pred EEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc-
Confidence 9999999999999976433468999999999999999999999999999999999999999999999999996543110
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK 878 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~ 878 (975)
........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+
T Consensus 339 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~ 393 (454)
T 1qcf_A 339 -------------------------YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE 393 (454)
T ss_dssp -------------------------HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH
T ss_pred -------------------------eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH
Confidence 011123356788999999998889999999999999999998 999999988888
Q ss_pred HHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 879 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 879 ~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
.+..+..+ ..++.+..++..+.+||.+||..||.+||| +.+|+
T Consensus 394 ~~~~i~~~-~~~~~~~~~~~~l~~li~~cl~~dp~~RPt----~~~i~ 436 (454)
T 1qcf_A 394 VIRALERG-YRMPRPENCPEELYNIMMRCWKNRPEERPT----FEYIQ 436 (454)
T ss_dssp HHHHHHHT-CCCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHH
T ss_pred HHHHHHcC-CCCCCCCCCCHHHHHHHHHHccCChhHCcC----HHHHH
Confidence 87776654 445556678999999999999999999999 55554
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-35 Score=330.59 Aligned_cols=234 Identities=18% Similarity=0.233 Sum_probs=182.0
Q ss_pred CCCcccccccccCCceEEEEEEEeCC--------CeEEEEEEeccchh----------------cc--------------
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGS--------GQYFAMKAMDKGVM----------------LN-------------- 709 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t--------~~~vAiK~l~~~~~----------------~~-------------- 709 (975)
.++|++.+.||+|+||.||+|.+..+ ++.||||++..... ..
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~ 120 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIP 120 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETTSTHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCC
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecccchHHHHHHHHHHhcccchhhhhhhhccCCccCcc
Confidence 47899999999999999999999874 88999999865410 00
Q ss_pred ----cc-ccCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC--c
Q 002051 710 ----RN-KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG--H 782 (975)
Q Consensus 710 ----~~-~~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g--~ 782 (975)
.. ....++||||||| +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++ .
T Consensus 121 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~ 199 (352)
T 2jii_A 121 TCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQ 199 (352)
T ss_dssp CCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEE
T ss_pred chhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCce
Confidence 00 1267899999999 99999999875446799999999999999999999999999999999999999988 8
Q ss_pred EEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHH
Q 002051 783 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 862 (975)
Q Consensus 783 vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ 862 (975)
+||+|||+++......... ...........||+.|+|||++.+..++.++|||||||++|
T Consensus 200 ~kl~Dfg~a~~~~~~~~~~--------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ 259 (352)
T 2jii_A 200 VTLAGYGFAFRYCPSGKHV--------------------AYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCML 259 (352)
T ss_dssp EEECCGGGCBCSSGGGCCC--------------------CCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred EEEecCcceeeccCCCccc--------------------cccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHH
Confidence 9999999997654221100 00111223458999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCC--HHHHHHHH---HhcCCCCCCC----CCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 863 EMLYGYTPFRGKT--RQKTFANI---LHKDLKFPSS----TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 863 ell~G~~Pf~~~~--~~~~~~~i---~~~~~~~p~~----~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
+|++|+.||.+.. ........ ......++.. ..++..+.+||.+||..||.+||| +.+|+
T Consensus 260 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~l~ 328 (352)
T 2jii_A 260 KWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPP----YAMLR 328 (352)
T ss_dssp HHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCC----HHHHH
T ss_pred HHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCC----HHHHH
Confidence 9999999998753 32222222 1222222211 246899999999999999999999 55554
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=328.89 Aligned_cols=236 Identities=25% Similarity=0.382 Sum_probs=190.7
Q ss_pred ccccCCCcccccccccCCceEEEEEEEe-----CCCeEEEEEEeccchh--------------------------ccc-c
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVM--------------------------LNR-N 711 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~-----~t~~~vAiK~l~~~~~--------------------------~~~-~ 711 (975)
+.+..++|++.+.||+|+||.||+|.+. .+++.||||++..... ... .
T Consensus 22 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 101 (316)
T 2xir_A 22 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT 101 (316)
T ss_dssp HBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred eecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEe
Confidence 4567789999999999999999999964 4678999999865310 000 0
Q ss_pred ccCCeEEEEEeccCCCCHHHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE
Q 002051 712 KTKTHVCLITDYCPGGELFLLLDRQPT--------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL 777 (975)
Q Consensus 712 ~~~~~~~lV~Ey~~ggsL~~~l~~~~~--------------~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl 777 (975)
.....+|+|||||++++|.+++..... ..+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 102 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~ 181 (316)
T 2xir_A 102 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL 181 (316)
T ss_dssp CTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred cCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEE
Confidence 134568999999999999999987532 128999999999999999999999999999999999999
Q ss_pred ecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHH
Q 002051 778 QGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWAL 857 (975)
Q Consensus 778 ~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSL 857 (975)
+.++.+||+|||++........ ........||+.|+|||++.+..++.++|||||
T Consensus 182 ~~~~~~kl~Dfg~~~~~~~~~~-------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~sl 236 (316)
T 2xir_A 182 SEKNVVKICDFGLARDIYKDPD-------------------------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236 (316)
T ss_dssp CGGGCEEECCCGGGSCTTTCTT-------------------------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred CCCCCEEECCCccccccccCcc-------------------------ceeccCCCcceeecCchhhccccccchhHHHHH
Confidence 9999999999999965432110 011234567899999999999999999999999
Q ss_pred HHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 858 GILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 858 G~il~ell~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
||++|+|++ |..||.+......+...+......+....+++.+.++|.+||+.||.+||| +.++++|
T Consensus 237 G~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~~ 304 (316)
T 2xir_A 237 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT----FSELVEH 304 (316)
T ss_dssp HHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HHHHHHHHhCCCCCCcccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHHH
Confidence 999999998 999998876555444444444444445567899999999999999999999 8888765
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=317.68 Aligned_cols=228 Identities=22% Similarity=0.327 Sum_probs=184.7
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc-------------------cccc----------cCC
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-------------------NRNK----------TKT 715 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~-------------------~~~~----------~~~ 715 (975)
.+..++|++.+.||+|+||.||+|++..+++.||+|++...... .... ...
T Consensus 15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 94 (287)
T 4f0f_A 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN 94 (287)
T ss_dssp BCCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT
T ss_pred hhhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC
Confidence 35678999999999999999999999999999999998532110 0000 112
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEEecCCc-----EEEeec
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGH-----VSLTDF 788 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~g--IiHrDIKp~NILl~~~g~-----vkL~DF 788 (975)
..++||||+++++|.+++... ...+++..+..++.||+.||.|||++| |+||||||+|||++.++. +||+||
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 95 PPRMVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp TTEEEEECCTTCBHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred CCeEEEEecCCCCHHHHHhcc-cCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 227999999999999988754 357999999999999999999999999 999999999999988776 999999
Q ss_pred cCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhc--CCCCCChhHHHHHHHHHHHHHh
Q 002051 789 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA--GAGHTSAVDWWALGILLYEMLY 866 (975)
Q Consensus 789 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~--~~~~~~k~DIWSLG~il~ell~ 866 (975)
|+++.... ......||+.|+|||++. ...++.++|||||||++|+|++
T Consensus 174 g~~~~~~~------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~ 223 (287)
T 4f0f_A 174 GLSQQSVH------------------------------SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILT 223 (287)
T ss_dssp TTCBCCSS------------------------------CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHH
T ss_pred Cccccccc------------------------------cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHc
Confidence 99854221 122457899999999994 4557889999999999999999
Q ss_pred CCCCCCCCCHHH--HHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 867 GYTPFRGKTRQK--TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 867 G~~Pf~~~~~~~--~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
|..||...+... ....+............++..+.+||.+||+.||.+||| +.++++
T Consensus 224 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~ 282 (287)
T 4f0f_A 224 GEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPH----FSYIVK 282 (287)
T ss_dssp SSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred CCCCCccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcC----HHHHHH
Confidence 999998754333 345555555555556678999999999999999999999 777764
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-35 Score=327.25 Aligned_cols=241 Identities=20% Similarity=0.259 Sum_probs=184.5
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLI 720 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV 720 (975)
.+..++|++.+.||+|+||+||+|.+..+++.||+|++.... +.....+...+|+|
T Consensus 6 ~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 85 (310)
T 3s95_A 6 IFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI 85 (310)
T ss_dssp EECGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eeChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEE
Confidence 456789999999999999999999999999999999875421 11222357789999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 800 (975)
||||+|++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.........
T Consensus 86 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (310)
T 3s95_A 86 TEYIKGGTLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164 (310)
T ss_dssp EECCTTCBHHHHHHHC-CTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC-----
T ss_pred EEecCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceeccccccc
Confidence 9999999999999874 356999999999999999999999999999999999999999999999999999765432111
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHH--
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK-- 878 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~-- 878 (975)
..... .............+||+.|+|||++.+..++.++|||||||++|+|++|..||.......
T Consensus 165 ~~~~~-------------~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~ 231 (310)
T 3s95_A 165 PEGLR-------------SLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD 231 (310)
T ss_dssp ----------------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT
T ss_pred ccccc-------------cccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH
Confidence 00000 000001112235689999999999999999999999999999999999999986532211
Q ss_pred ---HHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 879 ---TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 879 ---~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
......... ....++..+.+||.+||+.||++||| +.++++
T Consensus 232 ~~~~~~~~~~~~----~~~~~~~~l~~li~~~l~~dP~~Rps----~~~l~~ 275 (310)
T 3s95_A 232 FGLNVRGFLDRY----CPPNCPPSFFPITVRCCDLDPEKRPS----FVKLEH 275 (310)
T ss_dssp SSBCHHHHHHHT----CCTTCCTTHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred Hhhhhhcccccc----CCCCCCHHHHHHHHHHccCChhhCcC----HHHHHH
Confidence 011111111 12346778999999999999999999 777765
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-35 Score=329.50 Aligned_cols=239 Identities=19% Similarity=0.262 Sum_probs=190.4
Q ss_pred ccccCCCcccccccccCCceEEEEEE-----EeCCCeEEEEEEeccch-------------------------hcccccc
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVE-----LCGSGQYFAMKAMDKGV-------------------------MLNRNKT 713 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~-----~~~t~~~vAiK~l~~~~-------------------------~~~~~~~ 713 (975)
..+..++|++++.||+|+||.||+|+ +..+++.||||++.... +......
T Consensus 25 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 104 (327)
T 2yfx_A 25 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 104 (327)
T ss_dssp CBCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC
Confidence 45677899999999999999999999 55678899999985321 1122225
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec---CCcEEE
Q 002051 714 KTHVCLITDYCPGGELFLLLDRQPT-----KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSL 785 (975)
Q Consensus 714 ~~~~~lV~Ey~~ggsL~~~l~~~~~-----~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~---~g~vkL 785 (975)
...+|+|||||+|++|.+++..... ..+++..+..++.||+.||.|||++||+||||||+|||++. +..+||
T Consensus 105 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 105 SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEE
Confidence 6678999999999999999987532 35899999999999999999999999999999999999984 446999
Q ss_pred eeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHH
Q 002051 786 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 865 (975)
Q Consensus 786 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell 865 (975)
+|||++....... .........||+.|+|||++.+..++.++|||||||++|+|+
T Consensus 185 ~Dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell 239 (327)
T 2yfx_A 185 GDFGMARDIYRAS-------------------------YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 239 (327)
T ss_dssp CCCHHHHHHHC-------------------------------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred Ccccccccccccc-------------------------ccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHH
Confidence 9999985432110 011223456899999999999889999999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCcc
Q 002051 866 Y-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932 (975)
Q Consensus 866 ~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~ 932 (975)
+ |..||.+.........+..... .+....++..+.+||.+||+.||.+||| +.+|++|.|+-
T Consensus 240 t~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~~l~~~ 302 (327)
T 2yfx_A 240 SLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPEDRPN----FAIILERIEYC 302 (327)
T ss_dssp TTSCCSSTTCCHHHHHHHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHHHHHH
T ss_pred cCCCCCCCCcCHHHHHHHHhcCCC-CCCCCCCCHHHHHHHHHHhcCChhhCcC----HHHHHHHHHHH
Confidence 8 9999999888777777766543 3334567899999999999999999999 99999987764
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-35 Score=328.83 Aligned_cols=235 Identities=22% Similarity=0.339 Sum_probs=194.1
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCCe-----EEEEEEeccch--------------------------hccccc
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQ-----YFAMKAMDKGV--------------------------MLNRNK 712 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~-----~vAiK~l~~~~--------------------------~~~~~~ 712 (975)
..+..++|++.+.||+|+||.||+|.+..+++ .||+|.+.... +.....
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 45778899999999999999999999977664 79999986531 011122
Q ss_pred cCCeEEEEEeccCCCCHHHHHhhCC------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC
Q 002051 713 TKTHVCLITDYCPGGELFLLLDRQP------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN 780 (975)
Q Consensus 713 ~~~~~~lV~Ey~~ggsL~~~l~~~~------------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~ 780 (975)
....+|+|||||++|+|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG 200 (333)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGG
T ss_pred cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCC
Confidence 5677899999999999999997531 3468999999999999999999999999999999999999999
Q ss_pred CcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHH
Q 002051 781 GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGIL 860 (975)
Q Consensus 781 g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~i 860 (975)
+.+||+|||++........ ........||+.|+|||++.+..++.++|||||||+
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 255 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSN-------------------------YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 255 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTT-------------------------SEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred CeEEECccccccccccccc-------------------------eeecCCCCCCccccCHHHhccCCCChHHHHHHHHHH
Confidence 9999999999865431110 011233467889999999999899999999999999
Q ss_pred HHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 861 LYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 861 l~ell~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
+|+|++ |..||.+......+..+.......+.+...+..+.+||.+||+.||.+||| +.++++
T Consensus 256 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~l~~ 319 (333)
T 2i1m_A 256 LWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPT----FQQICS 319 (333)
T ss_dssp HHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred HHHHHcCCCCCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcC----HHHHHH
Confidence 999998 999999877666666776666666556667899999999999999999999 777765
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-35 Score=327.25 Aligned_cols=234 Identities=22% Similarity=0.308 Sum_probs=183.0
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCCeE----EEEEEeccchh-------------cccc-----------ccCC
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQY----FAMKAMDKGVM-------------LNRN-----------KTKT 715 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~----vAiK~l~~~~~-------------~~~~-----------~~~~ 715 (975)
..+..++|++++.||+|+||+||+|++..+++. ||+|.+..... +... ....
T Consensus 10 ~~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 89 (327)
T 3poz_A 10 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS 89 (327)
T ss_dssp EECCGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS
T ss_pred hhcCHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC
Confidence 346678899999999999999999999888765 47777643210 0000 0234
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
..++|+||+.+|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 90 ~~~~v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 168 (327)
T 3poz_A 90 TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp SEEEEEECCTTCBHHHHHHHS-TTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHT
T ss_pred CeEEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEcc
Confidence 578999999999999999874 3569999999999999999999999999999999999999999999999999986643
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 874 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~ 874 (975)
.... ........||+.|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus 169 ~~~~-------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 223 (327)
T 3poz_A 169 AEEK-------------------------EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223 (327)
T ss_dssp TTCC--------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred CCcc-------------------------cccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCC
Confidence 2211 011123457889999999999999999999999999999999 99999987
Q ss_pred CHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 875 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
+.......+.. ....+....++..+.+||.+||+.||.+||| +.+++++
T Consensus 224 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~ell~~ 272 (327)
T 3poz_A 224 PASEISSILEK-GERLPQPPICTIDVYMIMVKCWMIDADSRPK----FRELIIE 272 (327)
T ss_dssp CGGGHHHHHHT-TCCCCCCTTBCHHHHHHHHHHTCSCGGGSCC----HHHHHHH
T ss_pred CHHHHHHHHHc-CCCCCCCccCCHHHHHHHHHHcCCChhhCCC----HHHHHHH
Confidence 77665554444 3445555668899999999999999999999 7777654
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-35 Score=345.07 Aligned_cols=234 Identities=23% Similarity=0.319 Sum_probs=195.8
Q ss_pred cccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-----------------------hccccccCCeEEE
Q 002051 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-----------------------MLNRNKTKTHVCL 719 (975)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-----------------------~~~~~~~~~~~~l 719 (975)
.+.+...+|++.++||+|+||.||+|.++.++..||||+++... ++........+||
T Consensus 214 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 293 (495)
T 1opk_A 214 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 293 (495)
T ss_dssp CCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred ccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEE
Confidence 45677889999999999999999999999999999999987542 1112225678899
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
|||||++|+|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 294 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 372 (495)
T 1opk_A 294 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT- 372 (495)
T ss_dssp EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC-
T ss_pred EEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCc-
Confidence 9999999999999987656679999999999999999999999999999999999999999999999999996543110
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK 878 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~ 878 (975)
........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.+...
T Consensus 373 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~ 427 (495)
T 1opk_A 373 -------------------------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 427 (495)
T ss_dssp -------------------------EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred -------------------------eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH
Confidence 011123456789999999998889999999999999999998 999999887766
Q ss_pred HHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 879 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 879 ~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
....+. .....+.+..++..+.+||.+||+.||.+||| +.+|++
T Consensus 428 ~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~el~~ 471 (495)
T 1opk_A 428 VYELLE-KDYRMERPEGCPEKVYELMRACWQWNPSDRPS----FAEIHQ 471 (495)
T ss_dssp HHHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred HHHHHH-cCCCCCCCCCCCHHHHHHHHHHcCcChhHCcC----HHHHHH
Confidence 665544 34455555678999999999999999999999 666653
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-35 Score=320.14 Aligned_cols=225 Identities=18% Similarity=0.252 Sum_probs=181.3
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCC-------eEEEEEEeccch------------------------hcccccc
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSG-------QYFAMKAMDKGV------------------------MLNRNKT 713 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~-------~~vAiK~l~~~~------------------------~~~~~~~ 713 (975)
.+..++|++.+.||+|+||.||+|.+..++ ..||+|++.... +......
T Consensus 4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 83 (289)
T 4fvq_A 4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC 83 (289)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC
T ss_pred EechhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe
Confidence 456789999999999999999999998877 579999986532 1112225
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc--------EEE
Q 002051 714 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH--------VSL 785 (975)
Q Consensus 714 ~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~--------vkL 785 (975)
....|+|||||+|++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++. +||
T Consensus 84 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl 162 (289)
T 4fvq_A 84 GDENILVQEFVKFGSLDTYLKKN-KNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKL 162 (289)
T ss_dssp TTCCEEEEECCTTCBHHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEE
T ss_pred CCCCEEEEECCCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeee
Confidence 67789999999999999999874 234899999999999999999999999999999999999998887 999
Q ss_pred eeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHH
Q 002051 786 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEM 864 (975)
Q Consensus 786 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~el 864 (975)
+|||++.... ......||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 163 ~Dfg~~~~~~-------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el 211 (289)
T 4fvq_A 163 SDPGISITVL-------------------------------PKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEI 211 (289)
T ss_dssp CCCCSCTTTS-------------------------------CHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHH
T ss_pred ccCccccccc-------------------------------CccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHH
Confidence 9999985432 1122457889999999987 6789999999999999999
Q ss_pred HhC-CCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 865 LYG-YTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 865 l~G-~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
++| .+||....... ..........++. ..+..+.+||.+||+.||.+||| +.++++|
T Consensus 212 ~~g~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~l~~li~~~l~~dp~~Rps----~~~ll~~ 269 (289)
T 4fvq_A 212 CSGGDKPLSALDSQR-KLQFYEDRHQLPA--PKAAELANLINNCMDYEPDHRPS----FRAIIRD 269 (289)
T ss_dssp HTTTCCTTTTSCHHH-HHHHHHTTCCCCC--CSSCTTHHHHHHHSCSSGGGSCC----HHHHHHH
T ss_pred HcCCCCCccccchHH-HHHHhhccCCCCC--CCCHHHHHHHHHHcCCChhHCcC----HHHHHHH
Confidence 995 55555544443 3344444434333 34678999999999999999999 8888764
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-36 Score=345.95 Aligned_cols=229 Identities=18% Similarity=0.185 Sum_probs=183.8
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------hccc------------------
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------MLNR------------------ 710 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------~~~~------------------ 710 (975)
....|++.+.||+|+||+||+|.+..+|+.||||++.... .+..
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 3446889999999999999999999999999999987211 0000
Q ss_pred ------------------cccCCeEEEEEeccCCCCHHHHHh-----hCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 002051 711 ------------------NKTKTHVCLITDYCPGGELFLLLD-----RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIY 767 (975)
Q Consensus 711 ------------------~~~~~~~~lV~Ey~~ggsL~~~l~-----~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiH 767 (975)
......+|++|+++ +++|.+++. ......+++..+..++.||+.||.|||++||+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiH 234 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVH 234 (413)
T ss_dssp EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 00023467888887 789999985 222345788899999999999999999999999
Q ss_pred cCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhh----
Q 002051 768 RDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII---- 843 (975)
Q Consensus 768 rDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l---- 843 (975)
|||||+|||++.++.+||+|||+++.... .....+| +.|+|||++
T Consensus 235 rDiKp~NILl~~~~~~kL~DFG~a~~~~~------------------------------~~~~~~g-~~y~aPE~~~~~~ 283 (413)
T 3dzo_A 235 TYLRPVDIVLDQRGGVFLTGFEHLVRDGA------------------------------SAVSPIG-RGFAPPETTAERM 283 (413)
T ss_dssp SCCCGGGEEECTTCCEEECCGGGCEETTE------------------------------EECCCCC-TTTCCHHHHHHHT
T ss_pred CCcccceEEEecCCeEEEEeccceeecCC------------------------------ccccCCC-CceeCchhhhccc
Confidence 99999999999999999999999865321 1234578 999999999
Q ss_pred ------cCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCC
Q 002051 844 ------AGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLG 917 (975)
Q Consensus 844 ------~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t 917 (975)
.+..++.++|||||||++|+|++|+.||.+.+.......+.. ....++..+.+||.+||+.||.+|||
T Consensus 284 ~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~------~~~~~~~~~~~li~~~l~~dP~~Rpt 357 (413)
T 3dzo_A 284 LPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFR------SCKNIPQPVRALLEGFLRYPKEDRLL 357 (413)
T ss_dssp STTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGGGS------SCCCCCHHHHHHHHHHTCSSGGGSCC
T ss_pred cccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHHHh------hcccCCHHHHHHHHHHccCChhhCcC
Confidence 555678899999999999999999999987655443333322 22356789999999999999999999
Q ss_pred ChhhHHHHHcCCCccCCCcc
Q 002051 918 SHEGANEIKKHPFFKGVNWA 937 (975)
Q Consensus 918 ~~~~~~elL~Hp~f~~~~~~ 937 (975)
+.++++||||+.+...
T Consensus 358 ----~~~~l~~~~~~~~~~~ 373 (413)
T 3dzo_A 358 ----PLQAMETPEYEQLRTE 373 (413)
T ss_dssp ----HHHHTTSHHHHHHHHH
T ss_pred ----HHHHHhCHHHHHHHHH
Confidence 9999999999977543
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-35 Score=317.70 Aligned_cols=235 Identities=22% Similarity=0.331 Sum_probs=192.3
Q ss_pred cccccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc-----------cc-----------cccCCeEE
Q 002051 661 DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----------NR-----------NKTKTHVC 718 (975)
Q Consensus 661 ~~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~-----------~~-----------~~~~~~~~ 718 (975)
...+.+..++|++++.||+|+||.||+|.+. ++..||+|++...... .. ......+|
T Consensus 5 ~~~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (279)
T 1qpc_A 5 EDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIY 83 (279)
T ss_dssp TCTTBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCE
T ss_pred hhhcccCHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcCCCcE
Confidence 3566788889999999999999999999974 5778999998654210 00 01345689
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
+||||+++++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 84 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 163 (279)
T 1qpc_A 84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163 (279)
T ss_dssp EEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC
T ss_pred EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcc
Confidence 99999999999999975332369999999999999999999999999999999999999999999999999986543211
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 877 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~ 877 (975)
........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.+..
T Consensus 164 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 217 (279)
T 1qpc_A 164 --------------------------YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP 217 (279)
T ss_dssp --------------------------EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH
T ss_pred --------------------------cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH
Confidence 011123457889999999998889999999999999999999 99999998888
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
+.+..+... ........++..+.+||.+||..||.+||| +.++++
T Consensus 218 ~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~l~~ 262 (279)
T 1qpc_A 218 EVIQNLERG-YRMVRPDNCPEELYQLMRLCWKERPEDRPT----FDYLRS 262 (279)
T ss_dssp HHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred HHHHHHhcc-cCCCCcccccHHHHHHHHHHhccChhhCCC----HHHHHH
Confidence 777776654 333444567899999999999999999999 666654
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=323.87 Aligned_cols=233 Identities=22% Similarity=0.312 Sum_probs=182.7
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCCeEE----EEEEeccch-------------hcccc-----------ccCC
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYF----AMKAMDKGV-------------MLNRN-----------KTKT 715 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~v----AiK~l~~~~-------------~~~~~-----------~~~~ 715 (975)
..+..++|++++.||+|+||.||+|.+..+++.+ |+|.+.... ++... ....
T Consensus 10 ~~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 89 (327)
T 3lzb_A 10 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS 89 (327)
T ss_dssp EECCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS
T ss_pred cccCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC
Confidence 3466789999999999999999999998888755 666553221 00000 0234
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
..++|++|+.+|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 90 ~~~~v~~~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~ 168 (327)
T 3lzb_A 90 TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp SEEEEECCCSSCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred CceEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence 578999999999999999875 3569999999999999999999999999999999999999999999999999997643
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 874 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~ 874 (975)
.... ........||+.|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus 169 ~~~~-------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~ 223 (327)
T 3lzb_A 169 AEEK-------------------------EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223 (327)
T ss_dssp ------------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred Cccc-------------------------cccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 2111 011123457889999999999999999999999999999999 99999988
Q ss_pred CHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 875 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
........+.. ....+....++..+.+||.+||..||.+||| +.|+++
T Consensus 224 ~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~ 271 (327)
T 3lzb_A 224 PASEISSILEK-GERLPQPPICTIDVYMIMRKCWMIDADSRPK----FRELII 271 (327)
T ss_dssp CGGGHHHHHHT-TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred CHHHHHHHHHc-CCCCCCCccCCHHHHHHHHHHcCCChhHCcC----HHHHHH
Confidence 77666555544 3445555668999999999999999999999 666664
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=324.32 Aligned_cols=230 Identities=22% Similarity=0.335 Sum_probs=189.5
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEE--EEEEeccch-------------h-------------ccccccCCeE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYF--AMKAMDKGV-------------M-------------LNRNKTKTHV 717 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~v--AiK~l~~~~-------------~-------------~~~~~~~~~~ 717 (975)
+..++|++.+.||+|+||.||+|++..++..+ |+|.+.... + ........++
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 101 (327)
T 1fvr_A 22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 101 (327)
T ss_dssp CCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred ccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCce
Confidence 56789999999999999999999999999865 999876421 0 1111256789
Q ss_pred EEEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcE
Q 002051 718 CLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHV 783 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~v 783 (975)
|+|||||++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCE
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeE
Confidence 99999999999999997642 2469999999999999999999999999999999999999999999
Q ss_pred EEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHH
Q 002051 784 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE 863 (975)
Q Consensus 784 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~e 863 (975)
||+|||++..... ........+++.|+|||++.+..++.++|||||||++|+
T Consensus 182 kL~Dfg~~~~~~~----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e 233 (327)
T 1fvr_A 182 KIADFGLSRGQEV----------------------------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 233 (327)
T ss_dssp EECCTTCEESSCE----------------------------ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred EEcccCcCccccc----------------------------cccccCCCCCccccChhhhccccCCchhcchHHHHHHHH
Confidence 9999999853221 011123457889999999998889999999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 864 MLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 864 ll~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
|++ |..||.+.+.......+... ...+....++..+.+||.+||..||.+||| +.++++|
T Consensus 234 llt~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~~ 294 (327)
T 1fvr_A 234 IVSLGGTPYCGMTCAELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYERPS----FAQILVS 294 (327)
T ss_dssp HHTTSCCTTTTCCHHHHHHHGGGT-CCCCCCTTBCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HHcCCCCCCCCCcHHHHHHHhhcC-CCCCCCCCCCHHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence 998 99999998887777666554 334444568899999999999999999999 7777764
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=324.12 Aligned_cols=236 Identities=20% Similarity=0.303 Sum_probs=191.1
Q ss_pred cccccCCCcccccccccCCceEEEEEEEe-------CCCeEEEEEEeccch--------------------------hcc
Q 002051 663 GEQINLQHFRPIKPLGSGDTGSVHLVELC-------GSGQYFAMKAMDKGV--------------------------MLN 709 (975)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~-------~t~~~vAiK~l~~~~--------------------------~~~ 709 (975)
.+.+..++|++.+.||+|+||.||+|.+. .+++.||||++.... +..
T Consensus 29 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 108 (334)
T 2pvf_A 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLG 108 (334)
T ss_dssp TTBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEE
Confidence 34567789999999999999999999986 457789999986431 111
Q ss_pred ccccCCeEEEEEeccCCCCHHHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 002051 710 RNKTKTHVCLITDYCPGGELFLLLDRQPT--------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 775 (975)
Q Consensus 710 ~~~~~~~~~lV~Ey~~ggsL~~~l~~~~~--------------~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NI 775 (975)
.......+|+|||||++|+|.+++..... ..+++..+..++.||+.||.|||++||+||||||+||
T Consensus 109 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NI 188 (334)
T 2pvf_A 109 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 188 (334)
T ss_dssp EECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGE
T ss_pred EEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceE
Confidence 12256788999999999999999986431 2489999999999999999999999999999999999
Q ss_pred EEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHH
Q 002051 776 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 855 (975)
Q Consensus 776 Ll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIW 855 (975)
|++.++.+||+|||++........ ........+|+.|+|||++.+..++.++|||
T Consensus 189 ll~~~~~~kL~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 243 (334)
T 2pvf_A 189 LVTENNVMKIADFGLARDINNIDY-------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243 (334)
T ss_dssp EECTTCCEEECCCTTCEECTTTSS-------------------------EECCSCCCCCGGGCCHHHHHHCEECHHHHHH
T ss_pred EEcCCCCEEEcccccccccccccc-------------------------ccccCCCCcccceeChHHhcCCCcChHHHHH
Confidence 999999999999999865432110 0112234578899999999988899999999
Q ss_pred HHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 856 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 856 SLG~il~ell~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
||||++|+|++ |..||.+.+..+....+.... ..+....++..+.+||.+||..||.+||| +.+++++
T Consensus 244 slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~~ 312 (334)
T 2pvf_A 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-RMDKPANCTNELYMMMRDCWHAVPSQRPT----FKQLVED 312 (334)
T ss_dssp HHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCC-CCCCCccCCHHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence 99999999999 999999988877777666553 33344567899999999999999999999 7777654
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=321.41 Aligned_cols=223 Identities=23% Similarity=0.341 Sum_probs=173.5
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVC 718 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~ 718 (975)
...++|++.+.||+|+||.||+|.+..+++.||+|++..... .........+|
T Consensus 31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 2h34_A 31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY 110 (309)
T ss_dssp ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence 346799999999999999999999999999999999865421 11122567899
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
+||||++|++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 111 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 111 VDMRLINGVDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp EEEECCCCEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred EEEEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 999999999999999874 569999999999999999999999999999999999999999999999999986543110
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~ 878 (975)
........|++.|+|||++.+..++.++|||||||++|+|++|..||.+.+...
T Consensus 189 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 242 (309)
T 2h34_A 189 --------------------------LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSV 242 (309)
T ss_dssp ----------------------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHH
T ss_pred --------------------------cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHH
Confidence 011234578999999999999999999999999999999999999998876553
Q ss_pred HHHHHHhcCCCCC--CCCCCcHHHHHHHHHhcccCccccC-C
Q 002051 879 TFANILHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRL-G 917 (975)
Q Consensus 879 ~~~~i~~~~~~~p--~~~~~s~~~~~li~~~L~~dP~~R~-t 917 (975)
+...+......+ ....++..+.+||.+||..||.+|| +
T Consensus 243 -~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s 283 (309)
T 2h34_A 243 -MGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVT 283 (309)
T ss_dssp -HHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSS
T ss_pred -HHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHh
Confidence 333444333222 2345788999999999999999999 5
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-35 Score=326.85 Aligned_cols=231 Identities=24% Similarity=0.324 Sum_probs=177.9
Q ss_pred cccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------ccc------------cc----cCC
Q 002051 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------LNR------------NK----TKT 715 (975)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------~~~------------~~----~~~ 715 (975)
...+..++|++++.||+|+||+||+|++. ++.||||++..... +.. .. ...
T Consensus 18 n~~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 95 (322)
T 3soc_A 18 NLYFQSMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDV 95 (322)
T ss_dssp CEEETTEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSE
T ss_pred ccccchhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCc
Confidence 34577889999999999999999999874 79999999864321 000 00 134
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC----------CCeecCCCCCCEEEecCCcEEE
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ----------GIIYRDLKPENVLLQGNGHVSL 785 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~----------gIiHrDIKp~NILl~~~g~vkL 785 (975)
++|+|||||++|+|.+++.. ..+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||
T Consensus 96 ~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL 172 (322)
T 3soc_A 96 DLWLITAFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACI 172 (322)
T ss_dssp EEEEEEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEE
T ss_pred eEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEE
Confidence 57999999999999999987 4599999999999999999999999 9999999999999999999999
Q ss_pred eeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-----CCCChhHHHHHHHH
Q 002051 786 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-----GHTSAVDWWALGIL 860 (975)
Q Consensus 786 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-----~~~~k~DIWSLG~i 860 (975)
+|||+++....... .......+||+.|+|||++.+. .++.++|||||||+
T Consensus 173 ~DFg~a~~~~~~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~i 227 (322)
T 3soc_A 173 ADFGLALKFEAGKS-------------------------AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLV 227 (322)
T ss_dssp CCCTTCEEECTTSC-------------------------CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHH
T ss_pred ccCCcccccccccC-------------------------ccccccCccCccccCHhhcccccccCcCCCccchhHHHHHH
Confidence 99999966542111 1122345799999999999874 34558899999999
Q ss_pred HHHHHhCCCCCCCCC----------------HHHHHHHHHhcCCCCCCC-----CCCcHHHHHHHHHhcccCccccCCCh
Q 002051 861 LYEMLYGYTPFRGKT----------------RQKTFANILHKDLKFPSS-----TPTSLHAKQLMYRLLHRDPKSRLGSH 919 (975)
Q Consensus 861 l~ell~G~~Pf~~~~----------------~~~~~~~i~~~~~~~p~~-----~~~s~~~~~li~~~L~~dP~~R~t~~ 919 (975)
+|+|++|+.||.+.. .......+.......... ...+..+.+||.+||+.||.+|||
T Consensus 228 l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-- 305 (322)
T 3soc_A 228 LWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLS-- 305 (322)
T ss_dssp HHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCC--
T ss_pred HHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcC--
Confidence 999999999997532 222222233322222111 112345999999999999999999
Q ss_pred hhHHHHHc
Q 002051 920 EGANEIKK 927 (975)
Q Consensus 920 ~~~~elL~ 927 (975)
+.++++
T Consensus 306 --~~ell~ 311 (322)
T 3soc_A 306 --AGCVGE 311 (322)
T ss_dssp --HHHHHH
T ss_pred --HHHHHH
Confidence 666654
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=317.88 Aligned_cols=233 Identities=23% Similarity=0.351 Sum_probs=176.0
Q ss_pred ccccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------cc-----------ccccCCe
Q 002051 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------LN-----------RNKTKTH 716 (975)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------~~-----------~~~~~~~ 716 (975)
...++..++|++.++||+|+||+||+|++.. .||+|+++.... +. .......
T Consensus 17 ~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 93 (289)
T 3og7_A 17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQ 93 (289)
T ss_dssp -CCBCCTTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred CCCccCccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCc
Confidence 4457888999999999999999999998643 599999864311 00 0124566
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
+++|||||.|++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 94 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 94 LAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp CEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred cEEEEEecCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceecccccc
Confidence 89999999999999999654 35699999999999999999999999999999999999999999999999999865331
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhc---CCCCCChhHHHHHHHHHHHHHhCCCCCCC
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRG 873 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~~~k~DIWSLG~il~ell~G~~Pf~~ 873 (975)
.. .........||+.|+|||++. +..++.++|||||||++|+|++|..||.+
T Consensus 173 ~~-------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 227 (289)
T 3og7_A 173 WS-------------------------GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN 227 (289)
T ss_dssp ------------------------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred cc-------------------------ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccc
Confidence 10 011123457999999999997 56688899999999999999999999988
Q ss_pred CCHHHHHHHHHh-cCCCCCC---CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 874 KTRQKTFANILH-KDLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 874 ~~~~~~~~~i~~-~~~~~p~---~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
......+..... .....+. ...++..+.+||.+||..||.+||| +.++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~ell~ 281 (289)
T 3og7_A 228 INNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPS----FPRILA 281 (289)
T ss_dssp CCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred cchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCC----HHHHHH
Confidence 666555544443 3322221 2357889999999999999999999 777664
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=330.13 Aligned_cols=231 Identities=22% Similarity=0.311 Sum_probs=178.8
Q ss_pred cccccCCCcccccccccCCceEEEEEEEe---CCCeEEEEEEeccch-------------------------hccccccC
Q 002051 663 GEQINLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGV-------------------------MLNRNKTK 714 (975)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~---~t~~~vAiK~l~~~~-------------------------~~~~~~~~ 714 (975)
...+..++|.+.+.||+|+||.||+|+++ .++..||||+++... +.......
T Consensus 39 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 118 (373)
T 2qol_A 39 AKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKS 118 (373)
T ss_dssp SCBCCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred HhhcCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC
Confidence 34567789999999999999999999987 467789999986431 11112256
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCcc
Q 002051 715 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 794 (975)
Q Consensus 715 ~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~ 794 (975)
..+|||||||++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 119 ~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 197 (373)
T 2qol_A 119 KPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVL 197 (373)
T ss_dssp SSCEEEEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred CceEEEEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence 7789999999999999999764 346999999999999999999999999999999999999999999999999999664
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCC
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 873 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~ 873 (975)
...... ........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 198 ~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~ 253 (373)
T 2qol_A 198 EDDPEA------------------------AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253 (373)
T ss_dssp ----------------------------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTT
T ss_pred ccCCcc------------------------ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCC
Confidence 321110 001112245788999999999999999999999999999997 9999999
Q ss_pred CCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh
Q 002051 874 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH 919 (975)
Q Consensus 874 ~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~ 919 (975)
.+..+....+... ...+....++..+.+||.+||+.||.+||++.
T Consensus 254 ~~~~~~~~~i~~~-~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~ 298 (373)
T 2qol_A 254 MSNQDVIKAVDEG-YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 298 (373)
T ss_dssp CCHHHHHHHHHTT-EECCCCTTCBHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCHHHHHHHHHcC-CCCCCCccccHHHHHHHHHHhCcChhhCcCHH
Confidence 8887777666543 34455556889999999999999999999943
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-34 Score=318.12 Aligned_cols=230 Identities=27% Similarity=0.382 Sum_probs=177.5
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch---------------------------hccccccCCeEEE
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV---------------------------MLNRNKTKTHVCL 719 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~---------------------------~~~~~~~~~~~~l 719 (975)
..++|++.+.||+|+||.||+|.+..+|+.||||++.... +.........+|+
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 4568999999999999999999999999999999986421 1111225678999
Q ss_pred EEeccCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 720 ITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
||||+.+++|.+++.. .....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~ 189 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 189 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC---------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCC
Confidence 9999999999999864 12356899999999999999999999999999999999999999999999999998654311
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCC--C
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK--T 875 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~--~ 875 (975)
. .......|++.|+|||++.+..++.++|||||||++|+|++|..||.+. .
T Consensus 190 ~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 242 (310)
T 2wqm_A 190 T---------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN 242 (310)
T ss_dssp ------------------------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC
T ss_pred C---------------------------ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh
Confidence 0 1122357899999999999999999999999999999999999999764 3
Q ss_pred HHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 876 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 876 ~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
.......+............++..+.+||.+||..||.+||| +.++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~il~ 290 (310)
T 2wqm_A 243 LYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPD----VTYVYD 290 (310)
T ss_dssp HHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred HHHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCC----HHHHHH
Confidence 334444555444433333567899999999999999999999 777765
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=319.77 Aligned_cols=230 Identities=27% Similarity=0.386 Sum_probs=177.7
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc--------------cc-------------cccCCeEE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--------------NR-------------NKTKTHVC 718 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~--------------~~-------------~~~~~~~~ 718 (975)
+..++|++++.||+|+||+||+|++ +++.||||++...... .. ......+|
T Consensus 5 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 5 TVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp CCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 3467899999999999999999988 7899999998654210 00 11245689
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH--------HCCCeecCCCCCCEEEecCCcEEEeeccC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH--------CQGIIYRDLKPENVLLQGNGHVSLTDFDL 790 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH--------~~gIiHrDIKp~NILl~~~g~vkL~DFG~ 790 (975)
+|||||++|+|.+++.. ..+++..+..++.||+.||.||| ++||+||||||+|||++.++.+||+|||+
T Consensus 83 lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 159 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL 159 (301)
T ss_dssp EEECCCTTCBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred EehhhccCCCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCC
Confidence 99999999999999964 46999999999999999999999 99999999999999999999999999999
Q ss_pred CCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC------CCCChhHHHHHHHHHHHH
Q 002051 791 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA------GHTSAVDWWALGILLYEM 864 (975)
Q Consensus 791 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~------~~~~k~DIWSLG~il~el 864 (975)
++........ ........+||+.|+|||++.+. .++.++|||||||++|+|
T Consensus 160 a~~~~~~~~~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el 216 (301)
T 3q4u_A 160 AVMHSQSTNQ-----------------------LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216 (301)
T ss_dssp CEEEETTTTE-----------------------EECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred eeeccccccc-----------------------ccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHH
Confidence 8654321110 00112345799999999999876 344689999999999999
Q ss_pred HhC----------CCCCCCC----CHHHHHHHHHhcCCCCCCC------CCCcHHHHHHHHHhcccCccccCCChhhHHH
Q 002051 865 LYG----------YTPFRGK----TRQKTFANILHKDLKFPSS------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 924 (975)
Q Consensus 865 l~G----------~~Pf~~~----~~~~~~~~i~~~~~~~p~~------~~~s~~~~~li~~~L~~dP~~R~t~~~~~~e 924 (975)
++| ..||... .....+..........+.. ...+..+.+||.+||+.||.+||| +.+
T Consensus 217 ~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps----~~~ 292 (301)
T 3q4u_A 217 ARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLT----ALR 292 (301)
T ss_dssp HTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCC----HHH
T ss_pred HhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCC----HHH
Confidence 999 8888652 2223333333322222221 124567999999999999999999 777
Q ss_pred HHc
Q 002051 925 IKK 927 (975)
Q Consensus 925 lL~ 927 (975)
+++
T Consensus 293 i~~ 295 (301)
T 3q4u_A 293 IKK 295 (301)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-35 Score=326.08 Aligned_cols=245 Identities=20% Similarity=0.341 Sum_probs=190.1
Q ss_pred ccccCCCcccccccccCCceEEEEEE----EeCCCeEEEEEEeccchh------------------------cc--cccc
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVE----LCGSGQYFAMKAMDKGVM------------------------LN--RNKT 713 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~----~~~t~~~vAiK~l~~~~~------------------------~~--~~~~ 713 (975)
..+..++|++++.||+|+||.||+|+ +..+++.||||++..... .. ....
T Consensus 18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 97 (327)
T 3lxl_A 18 TIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPG 97 (327)
T ss_dssp CBCCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred hhhchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC
Confidence 44677899999999999999999999 467899999999864310 00 1125
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 714 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 714 ~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
...+|+|||||++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 176 (327)
T 3lxl_A 98 RQSLRLVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKL 176 (327)
T ss_dssp SCEEEEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred CceEEEEEeecCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEccccccee
Confidence 67799999999999999999763 23599999999999999999999999999999999999999999999999999976
Q ss_pred cCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCC
Q 002051 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 873 (975)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~ 873 (975)
...... .........||+.|+|||++.+..++.++|||||||++|+|++|..||..
T Consensus 177 ~~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~ 232 (327)
T 3lxl_A 177 LPLDKD------------------------YYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCS 232 (327)
T ss_dssp CCTTCS------------------------EEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred cccCCc------------------------cceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence 432111 01122335688899999999998899999999999999999999999965
Q ss_pred CCHH--------------HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHH---cCCCccCCCc
Q 002051 874 KTRQ--------------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK---KHPFFKGVNW 936 (975)
Q Consensus 874 ~~~~--------------~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL---~Hp~f~~~~~ 936 (975)
.... ..+..........+....++..+.+||.+||+.||.+||| +.+++ +..|.....+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~ell~~L~~~~~~~~~~ 308 (327)
T 3lxl_A 233 PSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPS----FSALGPQLDMLWSGSRGC 308 (327)
T ss_dssp HHHHHHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHHHHHC-------
T ss_pred ccchhhhhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcC----HHHHHHHHHHHHhhhcCc
Confidence 3322 2233334444555566678999999999999999999999 66664 4455544444
Q ss_pred c
Q 002051 937 A 937 (975)
Q Consensus 937 ~ 937 (975)
.
T Consensus 309 ~ 309 (327)
T 3lxl_A 309 E 309 (327)
T ss_dssp -
T ss_pred c
Confidence 4
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-35 Score=317.96 Aligned_cols=230 Identities=23% Similarity=0.388 Sum_probs=183.7
Q ss_pred cccccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh----------------------ccc-cccCCeE
Q 002051 661 DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM----------------------LNR-NKTKTHV 717 (975)
Q Consensus 661 ~~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~----------------------~~~-~~~~~~~ 717 (975)
..++.+..++|++++.||+|+||.||+|.+ +|+.||+|+++.... ... ......+
T Consensus 13 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (278)
T 1byg_A 13 RSGWALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL 90 (278)
T ss_dssp --CCBCCGGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CC
T ss_pred hccccCChhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCce
Confidence 345678889999999999999999999987 488999999875421 011 1134578
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|+||||+++++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 170 (278)
T 1byg_A 91 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 170 (278)
T ss_dssp EEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-------
T ss_pred EEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeecccccccccc
Confidence 99999999999999998643334899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 876 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~ 876 (975)
.....+++.|+|||++.+..++.++|||||||++|+|++ |..||...+.
T Consensus 171 ------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~ 220 (278)
T 1byg_A 171 ------------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL 220 (278)
T ss_dssp -----------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG
T ss_pred ------------------------------ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 112357889999999999899999999999999999998 9999998877
Q ss_pred HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 877 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 877 ~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
......+... ...+....+++.+.++|.+||..||.+||| +.++++
T Consensus 221 ~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~l~~ 266 (278)
T 1byg_A 221 KDVVPRVEKG-YKMDAPDGCPPAVYEVMKNCWHLDAAMRPS----FLQLRE 266 (278)
T ss_dssp GGHHHHHTTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred HHHHHHHhcC-CCCCCcccCCHHHHHHHHHHhcCChhhCCC----HHHHHH
Confidence 6666665543 334444568899999999999999999999 666653
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-35 Score=338.64 Aligned_cols=241 Identities=22% Similarity=0.332 Sum_probs=178.7
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh----------------------ccccccCCeEEEEEec
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM----------------------LNRNKTKTHVCLITDY 723 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~----------------------~~~~~~~~~~~lV~Ey 723 (975)
+...+|.+.+.||+|+||+||. ....+++.||||++..... .....+..++||||||
T Consensus 21 i~~~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 21 VGKISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp ETTEEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTEEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EccEEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 4445799999999999999864 4556889999999865421 1112256788999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec---C--CcEEEeeccCCCccCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---N--GHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~---~--g~vkL~DFG~a~~~~~~~ 798 (975)
| +|+|.+++.... ..+.+..+..++.||+.||.|||++||+||||||+|||++. + ..+||+|||+++......
T Consensus 100 ~-~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~ 177 (432)
T 3p23_A 100 C-AATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR 177 (432)
T ss_dssp C-SEEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC----
T ss_pred C-CCCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCC
Confidence 9 569999998653 34555567889999999999999999999999999999953 2 258899999996643211
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhc---CCCCCChhHHHHHHHHHHHHHh-CCCCCCCC
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLY-GYTPFRGK 874 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~ 874 (975)
. ........+||+.|+|||++. ...++.++|||||||++|+|++ |..||...
T Consensus 178 ~------------------------~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~ 233 (432)
T 3p23_A 178 H------------------------SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKS 233 (432)
T ss_dssp --------------------------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBST
T ss_pred c------------------------ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchh
Confidence 0 011223467999999999997 4567789999999999999999 99999765
Q ss_pred CHHHHHHHHHhcCCCCC-CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcc
Q 002051 875 TRQKTFANILHKDLKFP-SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 937 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~~p-~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~ 937 (975)
........+........ .....+..+.+||.+||+.||.+||| +.++++||||.+++|.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~evl~hp~f~~~~~~ 293 (432)
T 3p23_A 234 LQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPS----AKHVLKHPFFWSLEKQ 293 (432)
T ss_dssp TTHHHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCC----HHHHHTSTTTCCHHHH
T ss_pred hHHHHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCC----HHHHHhCccccChHHH
Confidence 54433222211111111 12234566899999999999999999 9999999999998884
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-34 Score=317.72 Aligned_cols=234 Identities=21% Similarity=0.307 Sum_probs=185.0
Q ss_pred cccCCCcccccccccCCceEEEEEE----EeCCCeEEEEEEeccchh-------------------------ccccc--c
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVE----LCGSGQYFAMKAMDKGVM-------------------------LNRNK--T 713 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~----~~~t~~~vAiK~l~~~~~-------------------------~~~~~--~ 713 (975)
.+....|++++.||+|+||.||+|+ +..+++.||+|++..... ..... .
T Consensus 17 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 96 (302)
T 4e5w_A 17 HFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG 96 (302)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC--
T ss_pred hhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCC
Confidence 3556779999999999999999999 567899999999874320 00111 2
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 714 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 714 ~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
...+|+|||||++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus 97 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 175 (302)
T 4e5w_A 97 GNGIKLIMEFLPSGSLKEYLPKN-KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKA 175 (302)
T ss_dssp -CCEEEEEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred CceEEEEEEeCCCCcHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECccccccc
Confidence 36789999999999999999653 24699999999999999999999999999999999999999999999999999966
Q ss_pred cCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCC
Q 002051 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 873 (975)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~ 873 (975)
...... .........||..|+|||++.+..++.++|||||||++|+|++|..||..
T Consensus 176 ~~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 231 (302)
T 4e5w_A 176 IETDKE------------------------YYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSS 231 (302)
T ss_dssp CCTTCC------------------------EEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred ccCCCc------------------------ceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcc
Confidence 542211 01122345688899999999998899999999999999999999987632
Q ss_pred --------------CCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 874 --------------KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 874 --------------~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
......+..........+.+..++..+.+||.+||..||.+||| +.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~ 295 (302)
T 4e5w_A 232 PMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTS----FQNLIE 295 (302)
T ss_dssp HHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCC----HHHHHH
T ss_pred hhhHHhhccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCC----HHHHHH
Confidence 22223333344444555666678999999999999999999999 777654
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=329.95 Aligned_cols=226 Identities=18% Similarity=0.198 Sum_probs=176.9
Q ss_pred ccccCCCcccccccccCCceEEEEE-----EEeCCCeEEEEEEeccchh------------------------ccccccC
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLV-----ELCGSGQYFAMKAMDKGVM------------------------LNRNKTK 714 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a-----~~~~t~~~vAiK~l~~~~~------------------------~~~~~~~ 714 (975)
..+..++|.+.+.||+|+||+||+| .+..+++.||||++..... .......
T Consensus 60 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 60 FQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp EECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred EEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 3456788999999999999999999 4677899999999875420 1111257
Q ss_pred CeEEEEEeccCCCCHHHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-----------C
Q 002051 715 THVCLITDYCPGGELFLLLDRQ---PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-----------N 780 (975)
Q Consensus 715 ~~~~lV~Ey~~ggsL~~~l~~~---~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~-----------~ 780 (975)
+..|||||||+||+|.+++... ....+++..++.++.||+.||+|||++||+||||||+|||++. +
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~ 219 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLS 219 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------C
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCcccccccc
Confidence 7889999999999999999742 3457999999999999999999999999999999999999998 8
Q ss_pred CcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHH
Q 002051 781 GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGIL 860 (975)
Q Consensus 781 g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~i 860 (975)
+.+||+|||+|+...... ........+||+.|+|||++.+..|+.++|||||||+
T Consensus 220 ~~~kl~DFG~a~~~~~~~-------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 274 (365)
T 3e7e_A 220 AGLALIDLGQSIDMKLFP-------------------------KGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAAT 274 (365)
T ss_dssp TTEEECCCTTCEEGGGSC-------------------------TTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHH
T ss_pred CCEEEeeCchhhhhhccC-------------------------CCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHH
Confidence 999999999996532110 0112345689999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChh
Q 002051 861 LYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 920 (975)
Q Consensus 861 l~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~ 920 (975)
+|+|++|+.||....... ......++ ....+..+.+++.+||+.+|.+|++...
T Consensus 275 l~elltg~~pf~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~l~~~p~~r~~~~~ 328 (365)
T 3e7e_A 275 VYCMLFGTYMKVKNEGGE-----CKPEGLFR-RLPHLDMWNEFFHVMLNIPDCHHLPSLD 328 (365)
T ss_dssp HHHHHHSSCCCEEEETTE-----EEECSCCT-TCSSHHHHHHHHHHHHCCCCTTCCCCHH
T ss_pred HHHHHhCCCccccCCCCc-----eeechhcc-ccCcHHHHHHHHHHHcCCCCCCcchHHH
Confidence 999999999996532210 00011111 1235678899999999999999987543
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-34 Score=323.43 Aligned_cols=242 Identities=24% Similarity=0.355 Sum_probs=177.2
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------cc-----ccccCC
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------LN-----RNKTKT 715 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------~~-----~~~~~~ 715 (975)
..+..++|++++.||+|+||.||+|++ +++.||||++..... +. ......
T Consensus 8 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 8 PSLDLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp -CCCTTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred CCcChHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 457789999999999999999999976 789999999864320 00 111334
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---------CCeecCCCCCCEEEecCCcEEEe
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ---------GIIYRDLKPENVLLQGNGHVSLT 786 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~---------gIiHrDIKp~NILl~~~g~vkL~ 786 (975)
.+|||||||++|+|.+++... .+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSLH---TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred eEEEEEecCCCCcHHHHHhhc---ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEe
Confidence 678999999999999999773 458899999999999999999999 99999999999999999999999
Q ss_pred eccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-------CCCCChhHHHHHHH
Q 002051 787 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-------AGHTSAVDWWALGI 859 (975)
Q Consensus 787 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-------~~~~~k~DIWSLG~ 859 (975)
|||+++.......... ..........+||+.|+|||++.+ ..++.++|||||||
T Consensus 163 DFG~a~~~~~~~~~~~-------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~ 223 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRP-------------------GEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGL 223 (336)
T ss_dssp CCTTCEECSSSSCC----------------------------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHH
T ss_pred eccceeecccccccCc-------------------cccccccccCCCccceeCchhhcCCcccccccccccccchHHHHH
Confidence 9999976543211100 001112334579999999999987 34566899999999
Q ss_pred HHHHHHhCCCCCCCC-C----------------HHHHHHHHHhcC---CCCCCC----CCCcHHHHHHHHHhcccCcccc
Q 002051 860 LLYEMLYGYTPFRGK-T----------------RQKTFANILHKD---LKFPSS----TPTSLHAKQLMYRLLHRDPKSR 915 (975)
Q Consensus 860 il~ell~G~~Pf~~~-~----------------~~~~~~~i~~~~---~~~p~~----~~~s~~~~~li~~~L~~dP~~R 915 (975)
++|+|++|..||... . ....+....... ..+|.. ...+..+.+||.+||+.||++|
T Consensus 224 il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 303 (336)
T 3g2f_A 224 IYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEAR 303 (336)
T ss_dssp HHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGS
T ss_pred HHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhC
Confidence 999999997765321 1 111222222211 122211 1245579999999999999999
Q ss_pred CCChhhHHHH------HcCCCccC
Q 002051 916 LGSHEGANEI------KKHPFFKG 933 (975)
Q Consensus 916 ~t~~~~~~el------L~Hp~f~~ 933 (975)
|| +.|+ +.++|-++
T Consensus 304 ps----~~e~l~~L~~ll~~~~~~ 323 (336)
T 3g2f_A 304 LT----AQXAEERMAELMMIWERN 323 (336)
T ss_dssp CC----HHHHHHHHHHHHHCCCC-
T ss_pred cc----hHHHHHHHHHHHHHHHhc
Confidence 99 6666 34566553
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-34 Score=314.87 Aligned_cols=232 Identities=23% Similarity=0.276 Sum_probs=187.0
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeC---CCeEEEEEEeccchh-------------------------ccccccCC
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVM-------------------------LNRNKTKT 715 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~---t~~~vAiK~l~~~~~-------------------------~~~~~~~~ 715 (975)
..+..++|++.+.||+|+||.||+|.+.. ++..||+|++.+... ... ....
T Consensus 7 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~-~~~~ 85 (281)
T 3cc6_A 7 YGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEEE 85 (281)
T ss_dssp CSCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEE-ECSS
T ss_pred ceecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEE-EcCC
Confidence 34667899999999999999999999764 345799999875310 011 1345
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
..|+||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 86 ~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 164 (281)
T 3cc6_A 86 PTWIIMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIE 164 (281)
T ss_dssp SCEEEEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-
T ss_pred CCEEEEecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcccc
Confidence 678999999999999999764 3458999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 874 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~ 874 (975)
... ........+++.|+|||++.+..++.++|||||||++|+|++ |+.||...
T Consensus 165 ~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~ 218 (281)
T 3cc6_A 165 DED--------------------------YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWL 218 (281)
T ss_dssp ----------------------------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred ccc--------------------------ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccC
Confidence 111 011123457889999999998899999999999999999998 99999887
Q ss_pred CHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 875 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
........+.... ..+....++..+.+||.+||..||.+||| +.+++++
T Consensus 219 ~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~ell~~ 267 (281)
T 3cc6_A 219 ENKDVIGVLEKGD-RLPKPDLCPPVLYTLMTRCWDYDPSDRPR----FTELVCS 267 (281)
T ss_dssp CGGGHHHHHHHTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred ChHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHccCCchhCcC----HHHHHHH
Confidence 7766666555543 34444567899999999999999999999 7777754
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-34 Score=313.76 Aligned_cols=234 Identities=20% Similarity=0.254 Sum_probs=190.8
Q ss_pred ccccCCCccccc-ccccCCceEEEEEEEe--CCCeEEEEEEeccchh-------------------------ccccccCC
Q 002051 664 EQINLQHFRPIK-PLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVM-------------------------LNRNKTKT 715 (975)
Q Consensus 664 ~~i~~~~y~i~~-~LG~G~fG~Vy~a~~~--~t~~~vAiK~l~~~~~-------------------------~~~~~~~~ 715 (975)
..+..++|.++. .||+|+||.||+|.+. .+++.||+|++..... .... ...
T Consensus 4 ~~~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~ 82 (287)
T 1u59_A 4 LFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAE 82 (287)
T ss_dssp CBCCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESS
T ss_pred ccccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCC
Confidence 345667888887 9999999999999864 4688999999875310 0111 345
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
.+|+||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 83 ALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALG 161 (287)
T ss_dssp SEEEEEECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred CcEEEEEeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence 689999999999999999753 3569999999999999999999999999999999999999999999999999996653
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 874 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~ 874 (975)
..... ........||+.|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus 162 ~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 217 (287)
T 1u59_A 162 ADDSY------------------------YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 217 (287)
T ss_dssp TCSCE------------------------ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred cCcce------------------------eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence 21110 011223457899999999998889999999999999999998 99999998
Q ss_pred CHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 875 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
...+....+.... ..+.+..++..+.+||.+||..||.+||| +.++++|
T Consensus 218 ~~~~~~~~i~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~l~~~ 266 (287)
T 1u59_A 218 KGPEVMAFIEQGK-RMECPPECPPELYALMSDCWIYKWEDRPD----FLTVEQR 266 (287)
T ss_dssp CTHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHTTCSSGGGSCC----HHHHHHH
T ss_pred CHHHHHHHHhcCC-cCCCCCCcCHHHHHHHHHHcCCChhhCcC----HHHHHHH
Confidence 8877777666543 23334568899999999999999999999 8888765
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-34 Score=337.03 Aligned_cols=234 Identities=22% Similarity=0.344 Sum_probs=189.0
Q ss_pred ccccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc-----------cc-----------cccCCeEEE
Q 002051 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----------NR-----------NKTKTHVCL 719 (975)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~-----------~~-----------~~~~~~~~l 719 (975)
..+.+..++|++.++||+|+||.||+|.+.. +..||||+++..... .. ......+||
T Consensus 177 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~i 255 (452)
T 1fmk_A 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI 255 (452)
T ss_dssp TCSBCCGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred cccccChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcCCceEE
Confidence 3466788899999999999999999999965 467999998753210 00 013467899
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
|||||++|+|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 256 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~- 334 (452)
T 1fmk_A 256 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE- 334 (452)
T ss_dssp EECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred EehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCc-
Confidence 9999999999999975434568999999999999999999999999999999999999999999999999996543110
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK 878 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~ 878 (975)
........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+....+
T Consensus 335 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~ 389 (452)
T 1fmk_A 335 -------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 389 (452)
T ss_dssp ---------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH
T ss_pred -------------------------eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH
Confidence 011123356789999999998899999999999999999999 999999988888
Q ss_pred HHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 879 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 879 ~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
.+..+..+ ...+.+..++..+.+||.+||+.||++||| +++|+.
T Consensus 390 ~~~~i~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt----~~~l~~ 433 (452)
T 1fmk_A 390 VLDQVERG-YRMPCPPECPESLHDLMCQCWRKEPEERPT----FEYLQA 433 (452)
T ss_dssp HHHHHHTT-CCCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred HHHHHHcC-CCCCCCCCCCHHHHHHHHHHccCChhhCcC----HHHHHH
Confidence 77776654 345555678999999999999999999999 666654
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-34 Score=319.12 Aligned_cols=234 Identities=22% Similarity=0.299 Sum_probs=186.0
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCCC----eEEEEEEeccch-------------------------hccccccC
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSG----QYFAMKAMDKGV-------------------------MLNRNKTK 714 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~----~~vAiK~l~~~~-------------------------~~~~~~~~ 714 (975)
..+..++|++.+.||+|+||.||+|.+..++ ..||||++.... +.......
T Consensus 39 ~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 118 (333)
T 1mqb_A 39 TEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY 118 (333)
T ss_dssp CBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred ccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecC
Confidence 4567789999999999999999999987653 469999986431 11122256
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCcc
Q 002051 715 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 794 (975)
Q Consensus 715 ~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~ 794 (975)
..+|||||||++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 119 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 197 (333)
T 1mqb_A 119 KPMMIITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197 (333)
T ss_dssp SSEEEEEECCTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred CCcEEEEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhh
Confidence 7899999999999999999764 356999999999999999999999999999999999999999999999999999664
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCC
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 873 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~ 873 (975)
...... ........+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 198 ~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~ 253 (333)
T 1mqb_A 198 EDDPEA------------------------TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWE 253 (333)
T ss_dssp -------------------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred cccccc------------------------ccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCccc
Confidence 321110 001122346789999999999999999999999999999998 9999998
Q ss_pred CCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 874 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 874 ~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
.+..+....+..+ ...+....++..+.+||.+||+.||.+||+ +.++++
T Consensus 254 ~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~l~~ 302 (333)
T 1mqb_A 254 LSNHEVMKAINDG-FRLPTPMDCPSAIYQLMMQCWQQERARRPK----FADIVS 302 (333)
T ss_dssp CCHHHHHHHHHTT-CCCCCCTTCBHHHHHHHHHHTCSSTTTSCC----HHHHHH
T ss_pred CCHHHHHHHHHCC-CcCCCcccCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 8887777766654 344555668899999999999999999999 666654
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-34 Score=314.83 Aligned_cols=231 Identities=21% Similarity=0.277 Sum_probs=186.9
Q ss_pred ccccCCCccccc-ccccCCceEEEEEEE--eCCCeEEEEEEeccchh--------------------------ccccccC
Q 002051 664 EQINLQHFRPIK-PLGSGDTGSVHLVEL--CGSGQYFAMKAMDKGVM--------------------------LNRNKTK 714 (975)
Q Consensus 664 ~~i~~~~y~i~~-~LG~G~fG~Vy~a~~--~~t~~~vAiK~l~~~~~--------------------------~~~~~~~ 714 (975)
..+..++|.+.+ .||+|+||.||+|.+ ..+++.||||++..... ... ...
T Consensus 11 ~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~-~~~ 89 (291)
T 1xbb_A 11 VYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGI-CEA 89 (291)
T ss_dssp CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEE-EES
T ss_pred eeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEE-ECC
Confidence 456677899998 999999999999954 56789999999875310 011 145
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCcc
Q 002051 715 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 794 (975)
Q Consensus 715 ~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~ 794 (975)
..+|+||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 90 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 167 (291)
T 1xbb_A 90 ESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 167 (291)
T ss_dssp SSEEEEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred CCcEEEEEeCCCCCHHHHHHhC--cCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence 6789999999999999999874 56999999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCC
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 873 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~ 873 (975)
...... ........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 168 ~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 223 (291)
T 1xbb_A 168 RADENY------------------------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 223 (291)
T ss_dssp CTTCSE------------------------EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred ccCCCc------------------------ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCC
Confidence 321110 011122356789999999998889999999999999999998 9999999
Q ss_pred CCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 874 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 874 ~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
.+.......+.... ..+.+..++..+.+||.+||..||.+||| +.+++
T Consensus 224 ~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~l~ 271 (291)
T 1xbb_A 224 MKGSEVTAMLEKGE-RMGCPAGCPREMYDLMNLCWTYDVENRPG----FAAVE 271 (291)
T ss_dssp CCHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSTTTSCC----HHHHH
T ss_pred CCHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHH
Confidence 88877776665543 33334567899999999999999999999 66665
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=314.13 Aligned_cols=227 Identities=23% Similarity=0.338 Sum_probs=186.0
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------cccc----------------
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------LNRN---------------- 711 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------~~~~---------------- 711 (975)
.++|++++.||+|+||.||+|.+..+++.||+|++....- ....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~ 89 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSR 89 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCSGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------C
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccccHHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccc
Confidence 3579999999999999999999999999999999864310 0000
Q ss_pred ccCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCC
Q 002051 712 KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 791 (975)
Q Consensus 712 ~~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a 791 (975)
.....+|+|||||++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus 90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 169 (284)
T 2a19_B 90 SKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLV 169 (284)
T ss_dssp CEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred cCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhh
Confidence 11445899999999999999998754567999999999999999999999999999999999999999999999999998
Q ss_pred CccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCC
Q 002051 792 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 871 (975)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf 871 (975)
...... .......||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus 170 ~~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~ 221 (284)
T 2a19_B 170 TSLKND----------------------------GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTA 221 (284)
T ss_dssp EESSCC----------------------------SCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSH
T ss_pred eecccc----------------------------ccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcc
Confidence 654311 1122346899999999999999999999999999999999999988
Q ss_pred CCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCcc
Q 002051 872 RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932 (975)
Q Consensus 872 ~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~ 932 (975)
... ......+..... ...++..+.+||.+||..||.+||| +.++++|.+.-
T Consensus 222 ~~~--~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps----~~e~l~~l~~~ 272 (284)
T 2a19_B 222 FET--SKFFTDLRDGII----SDIFDKKEKTLLQKLLSKKPEDRPN----TSEILRTLTVW 272 (284)
T ss_dssp HHH--HHHHHHHHTTCC----CTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHHHHHH
T ss_pred hhH--HHHHHHhhcccc----cccCCHHHHHHHHHHccCChhhCcC----HHHHHHHHHHH
Confidence 532 223333333221 2346889999999999999999999 99999887653
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-34 Score=317.15 Aligned_cols=235 Identities=23% Similarity=0.288 Sum_probs=182.5
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeC---CCeEEEEEEeccchhc--------------------------ccccc-
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVML--------------------------NRNKT- 713 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~---t~~~vAiK~l~~~~~~--------------------------~~~~~- 713 (975)
..+..++|.+.+.||+|+||.||+|.+.. +++.||+|++...... .....
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 108 (313)
T 3brb_A 29 VVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM 108 (313)
T ss_dssp TBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-
T ss_pred cccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec
Confidence 34667899999999999999999998875 5678999998643100 00001
Q ss_pred ----CCeEEEEEeccCCCCHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEE
Q 002051 714 ----KTHVCLITDYCPGGELFLLLDRQ----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSL 785 (975)
Q Consensus 714 ----~~~~~lV~Ey~~ggsL~~~l~~~----~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL 785 (975)
....|+||||+++++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||
T Consensus 109 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEE
T ss_pred cccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEE
Confidence 12569999999999999998532 2356999999999999999999999999999999999999999999999
Q ss_pred eeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHH
Q 002051 786 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 865 (975)
Q Consensus 786 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell 865 (975)
+|||++........ ........+++.|+|||++.+..++.++|||||||++|+|+
T Consensus 189 ~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 243 (313)
T 3brb_A 189 ADFGLSKKIYSGDY-------------------------YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIA 243 (313)
T ss_dssp CSCSCC-----------------------------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHH
T ss_pred eecCcceecccccc-------------------------cCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHH
Confidence 99999865432110 01122345788999999999999999999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 866 Y-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 866 ~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
+ |..||.+.........+.... ..+....++..+.+||.+||..||.+||| +.+|+.+
T Consensus 244 ~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~l~~~ 302 (313)
T 3brb_A 244 TRGMTPYPGVQNHEMYDYLLHGH-RLKQPEDCLDELYEIMYSCWRTDPLDRPT----FSVLRLQ 302 (313)
T ss_dssp TTSCCSSTTCCGGGHHHHHHTTC-CCCCBTTCCHHHHHHHHHTTCSSGGGSCC----HHHHHHH
T ss_pred hcCCCCCccCCHHHHHHHHHcCC-CCCCCccccHHHHHHHHHHcCCChhhCcC----HHHHHHH
Confidence 9 999999888877777776653 23334567899999999999999999999 7777654
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=327.46 Aligned_cols=235 Identities=17% Similarity=0.171 Sum_probs=176.7
Q ss_pred ccCCCcccccccccCCceEEEEEEEeC---CCeEEEEEEeccchh-----------------------------------
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVM----------------------------------- 707 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~---t~~~vAiK~l~~~~~----------------------------------- 707 (975)
+..++|++.+.||+|+||.||+|.+.. ++..||||++.....
T Consensus 34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~ 113 (345)
T 2v62_A 34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLF 113 (345)
T ss_dssp TTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCE
T ss_pred ccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCccee
Confidence 345789999999999999999999987 788999999865310
Q ss_pred cccc----ccCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC--
Q 002051 708 LNRN----KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-- 781 (975)
Q Consensus 708 ~~~~----~~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g-- 781 (975)
.... ....++||||||| |++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 114 YGSGLTEFKGRSYRFMVMERL-GIDLQKISGQN--GTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEEEEESSSCEEEEEEEECE-EEEHHHHCBGG--GBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTT
T ss_pred ecccccccCCCcEEEEEEecc-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCC
Confidence 0000 1267899999999 99999999764 3799999999999999999999999999999999999999887
Q ss_pred cEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHH
Q 002051 782 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 861 (975)
Q Consensus 782 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il 861 (975)
.+||+|||+++.+....... ...........||+.|+|||++.+..++.++|||||||++
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~--------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il 250 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHK--------------------QYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCM 250 (345)
T ss_dssp SEEECCCTTCEESSGGGCCC--------------------CCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHH
T ss_pred cEEEEeCCCceecccccccc--------------------cchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHH
Confidence 99999999997654211100 0011122456899999999999999999999999999999
Q ss_pred HHHHhCCCCCCCC--CHHHHHHHHHhcCCCCCC-------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 862 YEMLYGYTPFRGK--TRQKTFANILHKDLKFPS-------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 862 ~ell~G~~Pf~~~--~~~~~~~~i~~~~~~~p~-------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
|+|++|..||.+. ...............++. ...++..+.+||.+||..||.+||| +.+|++
T Consensus 251 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~l~~ 321 (345)
T 2v62_A 251 LRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPN----YQALKK 321 (345)
T ss_dssp HHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCC----HHHHHH
T ss_pred HHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCC----HHHHHH
Confidence 9999999999652 222222211111111111 1257889999999999999999999 777654
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-34 Score=318.40 Aligned_cols=214 Identities=26% Similarity=0.464 Sum_probs=171.5
Q ss_pred CCCcccc-cccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------ccccc----cCCeEEEEEe
Q 002051 668 LQHFRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------LNRNK----TKTHVCLITD 722 (975)
Q Consensus 668 ~~~y~i~-~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------~~~~~----~~~~~~lV~E 722 (975)
.++|.++ +.||+|+||.||+|.++.+++.||||++..... ..... ...++|||||
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e 95 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME 95 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEC
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecccHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEe
Confidence 4678888 779999999999999999999999999865320 11111 2667899999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec---CCcEEEeeccCCCccCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~---~g~vkL~DFG~a~~~~~~~~ 799 (975)
||+||+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++....
T Consensus 96 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~---- 171 (299)
T 3m2w_A 96 CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---- 171 (299)
T ss_dssp CCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT----
T ss_pred ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc----
Confidence 999999999999876667999999999999999999999999999999999999998 7889999999884321
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
+..++.++|||||||++|+|++|..||.+.+....
T Consensus 172 ---------------------------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~ 206 (299)
T 3m2w_A 172 ---------------------------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 206 (299)
T ss_dssp ---------------------------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------
T ss_pred ---------------------------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh
Confidence 13367789999999999999999999987654433
Q ss_pred HHHHHh----cCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 880 FANILH----KDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 880 ~~~i~~----~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
...+.. ....++.. ..++..+.+||.+||+.||.+||| +.|+|+||||+..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps----~~e~l~hp~~~~~ 263 (299)
T 3m2w_A 207 SPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWIMQS 263 (299)
T ss_dssp -CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCC----HHHHHTSHHHHTG
T ss_pred hHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCC----HHHHhcChhhccc
Confidence 221111 11122211 457889999999999999999999 9999999999864
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-34 Score=331.14 Aligned_cols=236 Identities=24% Similarity=0.321 Sum_probs=174.2
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch----------------------hccccccCCeEEEEEeccC
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV----------------------MLNRNKTKTHVCLITDYCP 725 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~----------------------~~~~~~~~~~~~lV~Ey~~ 725 (975)
.+.|.+.+.||+|+||+||.+ ...+|+.||||++.... +.....+..++|||||||
T Consensus 14 ~~~~~~~~~LG~G~~g~V~~~-~~~~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~- 91 (434)
T 2rio_A 14 KNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC- 91 (434)
T ss_dssp SSCEEEEEEEEECSTTCEEEE-EESSSSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC-
T ss_pred hheeeccCeEeeCCCeEEEEE-EEECCeEEEEEEEcHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC-
Confidence 345666788999999999875 45689999999986531 111122677899999999
Q ss_pred CCCHHHHHhhCCCCC-----CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC-------------CcEEEee
Q 002051 726 GGELFLLLDRQPTKV-----LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-------------GHVSLTD 787 (975)
Q Consensus 726 ggsL~~~l~~~~~~~-----l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~-------------g~vkL~D 787 (975)
+|+|.+++....... .++..+..++.||+.||.|||++||+||||||+|||++.+ +.+||+|
T Consensus 92 ~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~D 171 (434)
T 2rio_A 92 NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 171 (434)
T ss_dssp SEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECC
T ss_pred CCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcc
Confidence 569999998642211 1233457799999999999999999999999999999754 4899999
Q ss_pred ccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-------CCCCChhHHHHHHHH
Q 002051 788 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-------AGHTSAVDWWALGIL 860 (975)
Q Consensus 788 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-------~~~~~k~DIWSLG~i 860 (975)
||+++........ ........+||+.|+|||++.+ ..++.++|||||||+
T Consensus 172 FG~a~~~~~~~~~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~i 228 (434)
T 2rio_A 172 FGLCKKLDSGQSS-----------------------FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV 228 (434)
T ss_dssp CTTCEECCC-------------------------------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHH
T ss_pred cccceecCCCCcc-----------------------ceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHH
Confidence 9999765421100 0011234579999999999976 568899999999999
Q ss_pred HHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCC-----CCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 861 LYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSST-----PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 861 l~ell~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~-----~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
+|+|++ |..||....... ..+......++... .++.++.+||.+||+.||.+||| +.++++||||.+.
T Consensus 229 l~ellt~g~~Pf~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~eil~hp~f~~~ 302 (434)
T 2rio_A 229 FYYILSKGKHPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPT----AMKVLRHPLFWPK 302 (434)
T ss_dssp HHHHHTTSCCTTCSTTTHH--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCC----HHHHHTSGGGSCH
T ss_pred HHHHHhCCCCCCCCchhhH--HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCC----HHHHHhCCccCCc
Confidence 999998 999997655433 34555444443321 24578999999999999999999 9999999999754
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=324.38 Aligned_cols=234 Identities=24% Similarity=0.272 Sum_probs=180.8
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-------------------------ccccccCCeEEE
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-------------------------LNRNKTKTHVCL 719 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-------------------------~~~~~~~~~~~l 719 (975)
.+..++|++.+.||+|+||.||+|.+ .+++.||||++..... ........+.|+
T Consensus 26 ~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 104 (326)
T 3uim_A 26 QVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 104 (326)
T ss_dssp HTTTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEE
T ss_pred HHHhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEE
Confidence 34567999999999999999999985 4689999999865421 111225677899
Q ss_pred EEeccCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCCCCEEEecCCcEEEeeccCCCcc
Q 002051 720 ITDYCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQ---GIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 794 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~--~~~l~~~~i~~i~~qIl~aL~yLH~~---gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~ 794 (975)
|||||.+|+|.+++.... ...+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++...
T Consensus 105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 184 (326)
T 3uim_A 105 VYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 184 (326)
T ss_dssp EEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred EEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCcccccc
Confidence 999999999999998643 23599999999999999999999999 9999999999999999999999999999654
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCC
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 874 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~ 874 (975)
.... ........||+.|+|||++.+..++.++|||||||++|+|++|..||...
T Consensus 185 ~~~~--------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 238 (326)
T 3uim_A 185 DYKD--------------------------THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLA 238 (326)
T ss_dssp CSSS--------------------------SCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHH
T ss_pred Cccc--------------------------ccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccccc
Confidence 3211 11223456999999999998888999999999999999999999999521
Q ss_pred ----CHHHHHHHHHhcCCC-------------CCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCC
Q 002051 875 ----TRQKTFANILHKDLK-------------FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 929 (975)
Q Consensus 875 ----~~~~~~~~i~~~~~~-------------~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp 929 (975)
.........+..... .......+..+.+||.+||+.||.+||| +.+|++|-
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps----~~ell~~L 306 (326)
T 3uim_A 239 RLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPK----MSEVVRML 306 (326)
T ss_dssp HHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCC----HHHHHHHH
T ss_pred ccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCC----HHHHHHHh
Confidence 111111111111100 0111123467899999999999999999 88888764
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=315.18 Aligned_cols=233 Identities=22% Similarity=0.319 Sum_probs=184.7
Q ss_pred cccCCCcccccccccCCceEEEEEEEeC-CC--eEEEEEEeccchhc---------------------------cccccC
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCG-SG--QYFAMKAMDKGVML---------------------------NRNKTK 714 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~-t~--~~vAiK~l~~~~~~---------------------------~~~~~~ 714 (975)
.+..++|++++.||+|+||+||+|.+.. ++ ..||+|+++..... ... ..
T Consensus 14 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~ 92 (291)
T 1u46_A 14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVV-LT 92 (291)
T ss_dssp ECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEE-CS
T ss_pred ccchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEE-cc
Confidence 4567799999999999999999999754 33 36999988643110 000 23
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCcc
Q 002051 715 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 794 (975)
Q Consensus 715 ~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~ 794 (975)
...++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 93 ~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 93 PPMKMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp SSCEEEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred CCceeeEecccCCCHHHHHHhc-cCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccc
Confidence 4478999999999999999764 245899999999999999999999999999999999999999999999999998664
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCC
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 873 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~ 873 (975)
...... ........+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 172 ~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 227 (291)
T 1u46_A 172 PQNDDH------------------------YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 227 (291)
T ss_dssp CC-CCE------------------------EEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred cccccc------------------------hhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 321110 011223467889999999998889999999999999999999 9999999
Q ss_pred CCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 874 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 874 ~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
.+....+..+......++....++..+.++|.+||..||.+||| +.++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~l~~ 277 (291)
T 1u46_A 228 LNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT----FVALRD 277 (291)
T ss_dssp CCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred CCHHHHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcC----HHHHHH
Confidence 99888888888877777777778999999999999999999999 888775
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=320.54 Aligned_cols=232 Identities=22% Similarity=0.226 Sum_probs=180.7
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEEe
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITD 722 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~E 722 (975)
..++|++.+.||+|+||.||+|.+ .+++.||||++.... +........++|+|||
T Consensus 37 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (321)
T 2qkw_B 37 ATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYK 115 (321)
T ss_dssp CCCCCSCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEE
T ss_pred HHhccCccceeecCCCeeEEEEEE-CCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEE
Confidence 467899999999999999999996 468999999876431 1112225678899999
Q ss_pred ccCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCC
Q 002051 723 YCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 723 y~~ggsL~~~l~~~~--~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 800 (975)
||++|+|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 116 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 194 (321)
T 2qkw_B 116 YMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQ- 194 (321)
T ss_dssp CCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSC-
T ss_pred cCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccccccccc-
Confidence 999999999986542 23589999999999999999999999999999999999999999999999999865331110
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~ 880 (975)
........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.......
T Consensus 195 ------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~ 250 (321)
T 2qkw_B 195 ------------------------THLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMV 250 (321)
T ss_dssp ------------------------CCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCC
T ss_pred ------------------------cccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHH
Confidence 11123456899999999999889999999999999999999999999764332111
Q ss_pred -------HHHHhcCCC--------CCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 881 -------ANILHKDLK--------FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 881 -------~~i~~~~~~--------~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
.......+. .......+..+.+++.+||+.||++||| +.++++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~ell~~ 309 (321)
T 2qkw_B 251 NLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPS----MGDVLWK 309 (321)
T ss_dssp CHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcC----HHHHHHH
Confidence 111111111 0111224567899999999999999999 8888765
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-33 Score=310.65 Aligned_cols=226 Identities=24% Similarity=0.413 Sum_probs=176.0
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc----------ccc----------ccCCeEEEEEecc
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML----------NRN----------KTKTHVCLITDYC 724 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~----------~~~----------~~~~~~~lV~Ey~ 724 (975)
.+..++|++.+.||+|+||.||+|++ .++.||+|++...... ... ...+..|+||||+
T Consensus 4 ~i~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~lv~e~~ 81 (307)
T 2eva_A 4 MIDYKEIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYA 81 (307)
T ss_dssp BCCGGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCTTTTEEEEECC
T ss_pred cCCHhHeeeeeEeecCCCceEEEEEE--CCeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCcEEEEEcC
Confidence 35678899999999999999999988 4789999998654210 000 0224478999999
Q ss_pred CCCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCCCCEEEecCCc-EEEeeccCCCccCCCCC
Q 002051 725 PGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHC---QGIIYRDLKPENVLLQGNGH-VSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 725 ~ggsL~~~l~~~~~-~~l~~~~i~~i~~qIl~aL~yLH~---~gIiHrDIKp~NILl~~~g~-vkL~DFG~a~~~~~~~~ 799 (975)
+|++|.+++..... ..++...+..++.||+.||.|||+ +||+||||||+|||++.++. +||+|||++.....
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~--- 158 (307)
T 2eva_A 82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT--- 158 (307)
T ss_dssp TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc---
Confidence 99999999986432 247899999999999999999999 89999999999999998886 79999999854321
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC--HH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT--RQ 877 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~--~~ 877 (975)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||.... ..
T Consensus 159 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~ 211 (307)
T 2eva_A 159 ---------------------------HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF 211 (307)
T ss_dssp ---------------------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH
T ss_pred ---------------------------ccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH
Confidence 1123468999999999999999999999999999999999999997543 22
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
.....+.. ....+....++..+.+||.+||+.||.+||| +.++++
T Consensus 212 ~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~ 256 (307)
T 2eva_A 212 RIMWAVHN-GTRPPLIKNLPKPIESLMTRCWSKDPSQRPS----MEEIVK 256 (307)
T ss_dssp HHHHHHHT-TCCCCCBTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred HHHHHHhc-CCCCCcccccCHHHHHHHHHHhcCChhhCcC----HHHHHH
Confidence 33333333 2333444567899999999999999999999 667665
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-34 Score=330.61 Aligned_cols=229 Identities=25% Similarity=0.418 Sum_probs=180.8
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc-------------------------cccc--cCCeEE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-------------------------NRNK--TKTHVC 718 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~-------------------------~~~~--~~~~~~ 718 (975)
...++|++.+.||+|+||+||+|.+..+|+.||||++...... .... ...++|
T Consensus 6 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 85 (396)
T 4eut_A 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (396)
T ss_dssp CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeE
Confidence 3456899999999999999999999999999999998753211 0111 344789
Q ss_pred EEEeccCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE----ecCCcEEEeeccCCCc
Q 002051 719 LITDYCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL----QGNGHVSLTDFDLSCL 793 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~-~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl----~~~g~vkL~DFG~a~~ 793 (975)
+|||||+||+|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.
T Consensus 86 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp EEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred EEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 9999999999999997632 2239999999999999999999999999999999999999 6677899999999965
Q ss_pred cCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC--------CCCCChhHHHHHHHHHHHHH
Q 002051 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--------AGHTSAVDWWALGILLYEML 865 (975)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--------~~~~~k~DIWSLG~il~ell 865 (975)
.... ......+||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 166 ~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~ 217 (396)
T 4eut_A 166 LEDD----------------------------EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAA 217 (396)
T ss_dssp CCCG----------------------------GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCC----------------------------CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHH
Confidence 4311 11234579999999999875 45677999999999999999
Q ss_pred hCCCCCCC----CCHHHHHHHHHhcCCC-------------------CCCCC----CCcHHHHHHHHHhcccCccccCCC
Q 002051 866 YGYTPFRG----KTRQKTFANILHKDLK-------------------FPSST----PTSLHAKQLMYRLLHRDPKSRLGS 918 (975)
Q Consensus 866 ~G~~Pf~~----~~~~~~~~~i~~~~~~-------------------~p~~~----~~s~~~~~li~~~L~~dP~~R~t~ 918 (975)
+|+.||.. ....+.+..+..+... ++... .++..+.+||.+||++||++|||
T Consensus 218 tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s- 296 (396)
T 4eut_A 218 TGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWG- 296 (396)
T ss_dssp HSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCC-
T ss_pred HCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhcc-
Confidence 99999964 3345566666654321 11111 23457889999999999999999
Q ss_pred hhhHHHHH
Q 002051 919 HEGANEIK 926 (975)
Q Consensus 919 ~~~~~elL 926 (975)
+++++
T Consensus 297 ---~~e~l 301 (396)
T 4eut_A 297 ---FDQFF 301 (396)
T ss_dssp ---HHHHH
T ss_pred ---HHHHH
Confidence 55553
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=316.79 Aligned_cols=229 Identities=25% Similarity=0.374 Sum_probs=175.4
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------ccccccC----CeEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------LNRNKTK----THVCLI 720 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------~~~~~~~----~~~~lV 720 (975)
.++|++++.||+|+||.||+|++. ++.||||++..... ....... .++|+|
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 113 (337)
T 3mdy_A 36 AKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLI 113 (337)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEE
T ss_pred ccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEE
Confidence 458999999999999999999884 89999999854321 0000122 689999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeecCCCCCCEEEecCCcEEEeeccCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--------GIIYRDLKPENVLLQGNGHVSLTDFDLSC 792 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~--------gIiHrDIKp~NILl~~~g~vkL~DFG~a~ 792 (975)
||||++|+|.+++.. ..+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++.
T Consensus 114 ~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~ 190 (337)
T 3mdy_A 114 TDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 190 (337)
T ss_dssp ECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred EeccCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCce
Confidence 999999999999976 3599999999999999999999999 99999999999999999999999999996
Q ss_pred ccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCCh------hHHHHHHHHHHHHHh
Q 002051 793 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSA------VDWWALGILLYEMLY 866 (975)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k------~DIWSLG~il~ell~ 866 (975)
........ ........+||+.|+|||++.+..+... +|||||||++|+|++
T Consensus 191 ~~~~~~~~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~t 247 (337)
T 3mdy_A 191 KFISDTNE-----------------------VDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVAR 247 (337)
T ss_dssp ECC--------------------------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHT
T ss_pred eecccccc-----------------------ccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHh
Confidence 54321110 0011234579999999999988776654 999999999999999
Q ss_pred C----------CCCCCCCC----HHHHHHHHH-hcCCCCCCC-----CCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 867 G----------YTPFRGKT----RQKTFANIL-HKDLKFPSS-----TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 867 G----------~~Pf~~~~----~~~~~~~i~-~~~~~~p~~-----~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
| ..||.... ......... ......... ..++..+.+||.+||+.||.+||| +.+++
T Consensus 248 g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~ell 323 (337)
T 3mdy_A 248 RCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLT----ALRVK 323 (337)
T ss_dssp TBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCC----HHHHH
T ss_pred ccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCC----HHHHH
Confidence 9 77775421 222233332 222222211 234567999999999999999999 77777
Q ss_pred cC
Q 002051 927 KH 928 (975)
Q Consensus 927 ~H 928 (975)
+|
T Consensus 324 ~~ 325 (337)
T 3mdy_A 324 KT 325 (337)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-33 Score=307.95 Aligned_cols=229 Identities=19% Similarity=0.232 Sum_probs=180.9
Q ss_pred CcccccccccCCceEEEEEEEeCCCe---EEEEEEeccchh-------------------------ccccc-cCCeEEEE
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGVM-------------------------LNRNK-TKTHVCLI 720 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~---~vAiK~l~~~~~-------------------------~~~~~-~~~~~~lV 720 (975)
.|.+.+.||+|+||+||+|.+..+++ .||+|++....- ..... .....|+|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 46777999999999999999866554 899999864210 11111 23344899
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 800 (975)
|||+.+++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 102 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~- 179 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSP-QRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREY- 179 (298)
T ss_dssp ECCCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG-
T ss_pred EecccCCCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc-
Confidence 9999999999999763 45689999999999999999999999999999999999999999999999999965432110
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 879 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~ 879 (975)
..........+|+.|+|||.+.+..++.++|||||||++|+|++ |.+||...+....
T Consensus 180 ----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~ 237 (298)
T 3pls_A 180 ----------------------YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDL 237 (298)
T ss_dssp ----------------------GCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGH
T ss_pred ----------------------cccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHH
Confidence 01112234568899999999999999999999999999999999 5555666666555
Q ss_pred HHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 880 ~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
...+... ...+....++..+.+||.+||..||.+||| +.++++
T Consensus 238 ~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~ll~ 280 (298)
T 3pls_A 238 THFLAQG-RRLPQPEYCPDSLYQVMQQCWEADPAVRPT----FRVLVG 280 (298)
T ss_dssp HHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred HHHhhcC-CCCCCCccchHHHHHHHHHHccCChhhCcC----HHHHHH
Confidence 5554443 344555668899999999999999999999 666653
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-33 Score=312.18 Aligned_cols=235 Identities=23% Similarity=0.290 Sum_probs=187.0
Q ss_pred ccccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCC
Q 002051 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKT 715 (975)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~ 715 (975)
..+.+..++|++.+.||+|+||.||+|.+.. .+|+|++..... ........
T Consensus 26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 102 (319)
T 2y4i_B 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP 102 (319)
T ss_dssp GGSSSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS
T ss_pred ccccCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence 4566888999999999999999999999854 499999864311 11112567
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
++|+|||||+|++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++ ++.+||+|||++....
T Consensus 103 ~~~iv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~ 180 (319)
T 2y4i_B 103 HLAIITSLCKGRTLYSVVRDA-KIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISG 180 (319)
T ss_dssp CEEEECBCCCSEEHHHHTTSS-CCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC---
T ss_pred ceEEEeecccCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCccccc
Confidence 799999999999999999764 34689999999999999999999999999999999999998 6799999999986543
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC---------CCCCChhHHHHHHHHHHHHHh
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---------AGHTSAVDWWALGILLYEMLY 866 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~---------~~~~~k~DIWSLG~il~ell~ 866 (975)
..... ..........|++.|+|||++.+ ..++.++|||||||++|+|++
T Consensus 181 ~~~~~----------------------~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~ 238 (319)
T 2y4i_B 181 VLQAG----------------------RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHA 238 (319)
T ss_dssp -----------------------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccc----------------------ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHh
Confidence 11100 01112234568999999999975 347889999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 867 GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 867 G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
|..||.+.........+............++..+.+||.+||..||.+||| +.++++
T Consensus 239 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~l~~ 295 (319)
T 2y4i_B 239 REWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPT----FTKLMD 295 (319)
T ss_dssp SSCSSSSCCHHHHHHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCC----HHHHHH
T ss_pred CCCCCCCCCHHHHHHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcC----HHHHHH
Confidence 999999988888887777765544444567889999999999999999999 777765
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-34 Score=317.80 Aligned_cols=240 Identities=25% Similarity=0.373 Sum_probs=167.4
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch----------------------h---ccc--------c
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV----------------------M---LNR--------N 711 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~----------------------~---~~~--------~ 711 (975)
.+...+|++.+.||+|+||.||+|++..+++.||||++.... + ... .
T Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 103 (337)
T 3ll6_A 24 ELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD 103 (337)
T ss_dssp EETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTST
T ss_pred eccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccc
Confidence 455668999999999999999999999999999999874321 0 000 0
Q ss_pred ccCCeEEEEEeccCCCCHHHHHhh-CCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEEecCCcEEEeec
Q 002051 712 KTKTHVCLITDYCPGGELFLLLDR-QPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLTDF 788 (975)
Q Consensus 712 ~~~~~~~lV~Ey~~ggsL~~~l~~-~~~~~l~~~~i~~i~~qIl~aL~yLH~~g--IiHrDIKp~NILl~~~g~vkL~DF 788 (975)
.....+|+||||| +|+|.+++.. .....+++..++.++.||+.||.|||++| |+||||||+|||++.++.+||+||
T Consensus 104 ~~~~~~~lv~e~~-~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 104 TGQAEFLLLTELC-KGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp TSSEEEEEEEECC-SEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred cCCceEEEEEEec-CCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecC
Confidence 2345589999999 5799998865 22356999999999999999999999999 999999999999999999999999
Q ss_pred cCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhh---cCCCCCChhHHHHHHHHHHHHH
Q 002051 789 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII---AGAGHTSAVDWWALGILLYEML 865 (975)
Q Consensus 789 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l---~~~~~~~k~DIWSLG~il~ell 865 (975)
|++.............. ............||+.|+|||++ .+..++.++|||||||++|+|+
T Consensus 183 g~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~ 247 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQ---------------RRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLC 247 (337)
T ss_dssp TTCBCCSSCC----------------------------------------------CCTTSCSSHHHHHHHHHHHHHHHH
T ss_pred ccceeccccCccccccc---------------ccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHH
Confidence 99976543221100000 00001122345799999999998 5667888999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 866 YGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 866 ~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
+|..||....... +.......+.....+..+.+||.+||+.||.+||| +.|+++|
T Consensus 248 ~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~e~l~~ 302 (337)
T 3ll6_A 248 FRQHPFEDGAKLR----IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLS----IAEVVHQ 302 (337)
T ss_dssp HSSCCC----------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCC----HHHHHHH
T ss_pred hCCCCCcchhHHH----hhcCcccCCcccccchHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence 9999997654433 33444455555667788999999999999999999 8888876
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-33 Score=307.75 Aligned_cols=231 Identities=18% Similarity=0.229 Sum_probs=182.8
Q ss_pred CCCcccccccccCCceEEEEEEEeCC---CeEEEEEEeccch-------------------------hccc-cccCCeEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGV-------------------------MLNR-NKTKTHVC 718 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t---~~~vAiK~l~~~~-------------------------~~~~-~~~~~~~~ 718 (975)
..+|++.+.||+|+||.||+|.+..+ ...||+|.+.... +... .......|
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 34699999999999999999997543 3469999876421 0111 12456789
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
+|||||++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 104 ~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 182 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 182 (298)
T ss_dssp EEEECCTTCBHHHHHHCT-TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGG
T ss_pred EEEeCCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccc
Confidence 999999999999999763 3568999999999999999999999999999999999999999999999999997643211
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 877 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~ 877 (975)
.. .........||+.|+|||.+.+..++.++|||||||++|+|++ |.+||.+.+..
T Consensus 183 ~~-----------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~ 239 (298)
T 3f66_A 183 YY-----------------------SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 239 (298)
T ss_dssp GC-----------------------BC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT
T ss_pred hh-----------------------ccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH
Confidence 00 0112234567899999999999999999999999999999999 77788877776
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
.....+...... ..+..++..+.++|.+||..||.+||| +.++++
T Consensus 240 ~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps----~~ell~ 284 (298)
T 3f66_A 240 DITVYLLQGRRL-LQPEYCPDPLYEVMLKCWHPKAEMRPS----FSELVS 284 (298)
T ss_dssp THHHHHHTTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred HHHHHHhcCCCC-CCCccCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 666666655432 333457889999999999999999999 666654
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-34 Score=339.35 Aligned_cols=234 Identities=22% Similarity=0.344 Sum_probs=192.4
Q ss_pred ccccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc-----------cc-----------cccCCeEEE
Q 002051 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----------NR-----------NKTKTHVCL 719 (975)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~-----------~~-----------~~~~~~~~l 719 (975)
..+.+..++|++.++||+|+||.||+|.+.. +..||||+++..... .. ......+||
T Consensus 260 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~l 338 (535)
T 2h8h_A 260 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI 338 (535)
T ss_dssp TCSBCCGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred cceecchhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEeeccceE
Confidence 3466788899999999999999999999965 467999998753210 00 013467899
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
|||||.+|+|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 339 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 417 (535)
T 2h8h_A 339 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE- 417 (535)
T ss_dssp EECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH-
T ss_pred eeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc-
Confidence 9999999999999975434568999999999999999999999999999999999999999999999999996543110
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK 878 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~ 878 (975)
........++..|+|||++.+..++.++|||||||++|+|++ |..||.+....+
T Consensus 418 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~ 472 (535)
T 2h8h_A 418 -------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 472 (535)
T ss_dssp -------------------------HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH
T ss_pred -------------------------eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 011123356788999999998899999999999999999999 999999988888
Q ss_pred HHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 879 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 879 ~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
.+..+..+ ..++....++..+.+||.+||..||++||| +.+|+.
T Consensus 473 ~~~~i~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPt----~~~l~~ 516 (535)
T 2h8h_A 473 VLDQVERG-YRMPCPPECPESLHDLMCQCWRKEPEERPT----FEYLQA 516 (535)
T ss_dssp HHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred HHHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCChhHCcC----HHHHHH
Confidence 77776654 345555668899999999999999999999 666654
|
| >3ewk_A Sensor protein; PAS domain, alpha/beta fold, kinase, phosphoprotein, transfe flavoprotein; HET: FAD; 2.34A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-32 Score=286.46 Aligned_cols=221 Identities=22% Similarity=0.440 Sum_probs=207.5
Q ss_pred cEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCCEEEEE
Q 002051 201 TFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNL 280 (975)
Q Consensus 201 ~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~w~~ 280 (975)
.|+++|. +|+|+++|++|++++||+++|++|+++..+.++.........++..+..+..+.+++..+++||+.+|++
T Consensus 1 ~i~i~D~---~g~i~~~N~a~~~l~Gy~~~el~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~ 77 (227)
T 3ewk_A 1 LVSITDL---QGRILYANDNFCAVSRYGREELVGQDHRIVNSGYHGKAYIRDMWRTISRGNIWQGEFCNRRKDGTRYWVD 77 (227)
T ss_dssp CEEEEET---TCBEEEECHHHHHHTTCCHHHHTTSBGGGGCCSCSCHHHHHHHHHHHTTTCCEEEEEEEECSSSCEEEEE
T ss_pred CEEEECC---CCcEEehHHHHHHHHCcCHHHHcCCCHHHcCCCCCCHHHHHHHHHHHHcCCeEEEEEEEEcCCCCEEeee
Confidence 3788999 9999999999999999999999999998888887888888889999999999999999999999999999
Q ss_pred EEeeeeecCCCCEEEEEEEEeccchhhHHHHhhhcCCCCCchhhhhHHHHHHHHHHhhHHHHHHHhcCccccccCCCCCc
Q 002051 281 LTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRSLSESTNRPP 360 (975)
Q Consensus 281 ~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~~~~~~l~~r~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 360 (975)
+++.|++|.+|++.+++++.+|||++|++|++++.
T Consensus 78 ~~~~p~~d~~g~~~~~~~~~~DIT~~k~~e~~l~~--------------------------------------------- 112 (227)
T 3ewk_A 78 STIVPLMDNAGKPRQYISIRRDITAQKEAEAQLAR--------------------------------------------- 112 (227)
T ss_dssp EEEEEEECSSSCEEEEEEEEEECTTTTHHHHHHHH---------------------------------------------
T ss_pred eEEEEEEcCCCCEEEEEEEEEehhhHHHHHHHHHH---------------------------------------------
Confidence 99999999999999999999999999999987642
Q ss_pred ccccCCCchhhhhhccccCCCCCCCCCCCCCCCCCCcccccccccccccccccccCcccccccccccccCCCCCCcccch
Q 002051 361 IIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFMGLIGRKSQSTDDHDSFENE 440 (975)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (975)
T Consensus 113 -------------------------------------------------------------------------------- 112 (227)
T 3ewk_A 113 -------------------------------------------------------------------------------- 112 (227)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcCCCCCCCCCCCCCchhhHHHHHHHhhcCcHHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCC
Q 002051 441 IIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNC 520 (975)
Q Consensus 441 ~~~~~~~~~~~~~~~~d~~er~~~~~~l~~~~~l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~ 520 (975)
++.++++++++|+++|.+|+ |++||++|++++||+.+|++|++.
T Consensus 113 ---------------------------------~~~~~~~~~~~i~~~d~~g~---i~~~N~~~~~~~G~~~~e~~g~~~ 156 (227)
T 3ewk_A 113 ---------------------------------LKQAMDANSEMILLTDRAGR---IIYANPALCRFSGMAEGELLGQSP 156 (227)
T ss_dssp ---------------------------------HHHHHHTCCSEEEEECTTSC---EEEECHHHHHHHTCCTHHHHSSCG
T ss_pred ---------------------------------HHHHHhcCcCeEEEEcCCCc---EEEEchHHHHHhCCCHHHHcCCCh
Confidence 66788999999999999766 999999999999999999999999
Q ss_pred CCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEccCCc------EEEEEEEEeeeecCCCCEEEEEEEeec
Q 002051 521 RFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGK------KFWNLFHLQPMRDQKGEVQYFIGVQLD 585 (975)
Q Consensus 521 ~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~~kdG~------~~wv~~~~~pi~d~~G~i~~~v~i~rD 585 (975)
..+.++.........+++.+..+..|.+++..+++||+ .+|++++++|++|.+|.+++++++++|
T Consensus 157 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~k~G~~~~dg~~~~~~~~~~pi~d~~g~~~~~v~i~~D 227 (227)
T 3ewk_A 157 SILDSPLADQETLAAMQEALQAGQPWSGRLLNRRRTGPAPHDAEDYWAEISTTPIHTDGNGLVGYVQIQHD 227 (227)
T ss_dssp GGGBCTTSCHHHHHHHHHHHHHTCCEECCEEEEEECCSSSSCEEEEEEEEEEEEEECSSSCEEEEEEEEEC
T ss_pred hhccCCCCCHHHHHHHHHHHHcCCceeEEEEEECCCCCcCcccceEEEEEEEEEEECCCCCEEEEEEEecC
Confidence 99999999999999999999999999999999999997 899999999999999999999999998
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-34 Score=315.61 Aligned_cols=242 Identities=25% Similarity=0.369 Sum_probs=183.6
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hcccc----ccCCe
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRN----KTKTH 716 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~----~~~~~ 716 (975)
.+..++|++++.||+|+||.||+|.+..+++.||||++.... +.... .....
T Consensus 25 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (317)
T 2buj_A 25 IIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE 104 (317)
T ss_dssp EETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEE
T ss_pred EECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCce
Confidence 456778999999999999999999999999999999875321 00111 13457
Q ss_pred EEEEEeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCcc
Q 002051 717 VCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 794 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~ 794 (975)
+|+|||||.+|+|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 89999999999999998752 3457999999999999999999999999999999999999999999999999988653
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC---CCChhHHHHHHHHHHHHHhCCCCC
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG---HTSAVDWWALGILLYEMLYGYTPF 871 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~---~~~k~DIWSLG~il~ell~G~~Pf 871 (975)
....... .. ...........||+.|+|||++.+.. ++.++|||||||++|+|++|..||
T Consensus 185 ~~~~~~~----~~--------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~ 246 (317)
T 2buj_A 185 CIHVEGS----RQ--------------ALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY 246 (317)
T ss_dssp CEEEESH----HH--------------HHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTT
T ss_pred ccccccc----cc--------------cccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCCh
Confidence 2110000 00 00000112346799999999997654 688999999999999999999999
Q ss_pred CCCCH-HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 872 RGKTR-QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 872 ~~~~~-~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
..... .............++....++..+.+||.+||+.||.+||| +.++++|
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~~ 300 (317)
T 2buj_A 247 DMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPH----IPLLLSQ 300 (317)
T ss_dssp HHHHHTTSCHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred hhhhcccchhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCC----HHHHHHH
Confidence 53111 01122233345556666678999999999999999999999 8888765
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-33 Score=320.18 Aligned_cols=229 Identities=17% Similarity=0.233 Sum_probs=174.9
Q ss_pred CcccccccccCCceEEEEEEEeCCC---eEEEEEEeccch-------------------------hccc-cccCCeEEEE
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSG---QYFAMKAMDKGV-------------------------MLNR-NKTKTHVCLI 720 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~---~~vAiK~l~~~~-------------------------~~~~-~~~~~~~~lV 720 (975)
.|.+.+.||+|+||.||+|.+..++ ..||+|.++... +... .......|+|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 5888999999999999999986543 468999886421 0111 1135678999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 800 (975)
||||++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++........
T Consensus 170 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~ 248 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 248 (373)
T ss_dssp EECCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred EECCCCCCHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeeccccccccccccc
Confidence 9999999999999754 346899999999999999999999999999999999999999999999999999654321100
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 879 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~ 879 (975)
.........+|+.|+|||++.+..++.++|||||||++|+|++ |.+||.+.+..+.
T Consensus 249 -----------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~ 305 (373)
T 3c1x_A 249 -----------------------SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI 305 (373)
T ss_dssp --------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCH
T ss_pred -----------------------cccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHH
Confidence 0011223467889999999999999999999999999999999 7889988776666
Q ss_pred HHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 880 ~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
...+..+.. .+.+..++..+.++|.+||..||.+||| +.++++
T Consensus 306 ~~~~~~~~~-~~~p~~~~~~l~~li~~cl~~dp~~RPs----~~ell~ 348 (373)
T 3c1x_A 306 TVYLLQGRR-LLQPEYCPDPLYEVMLKCWHPKAEMRPS----FSELVS 348 (373)
T ss_dssp HHHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred HHHHHcCCC-CCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 666655442 3334457899999999999999999999 666654
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=314.95 Aligned_cols=231 Identities=23% Similarity=0.338 Sum_probs=181.7
Q ss_pred ccCCCcccccccccCCceEEEEEEE----eCCCeEEEEEEeccchh-------------------------ccccc--cC
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVM-------------------------LNRNK--TK 714 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~----~~t~~~vAiK~l~~~~~-------------------------~~~~~--~~ 714 (975)
+....|+++++||+|+||+||+|.. ..+++.||||++..... ..... ..
T Consensus 28 ~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (318)
T 3lxp_A 28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGA 107 (318)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTT
T ss_pred ecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCC
Confidence 4444459999999999999988764 45789999999875420 00111 25
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCcc
Q 002051 715 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 794 (975)
Q Consensus 715 ~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~ 794 (975)
..+|+|||||++++|.+++... .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 184 (318)
T 3lxp_A 108 ASLQLVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184 (318)
T ss_dssp TEEEEEECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred ceEEEEEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccccc
Confidence 7899999999999999999763 4899999999999999999999999999999999999999999999999999765
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCC
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 874 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~ 874 (975)
..... .........||+.|+|||++.+..++.++|||||||++|+|++|..||...
T Consensus 185 ~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~ 240 (318)
T 3lxp_A 185 PEGHE------------------------YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSP 240 (318)
T ss_dssp CTTCS------------------------EEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSH
T ss_pred ccccc------------------------ccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCccccc
Confidence 42110 001123446888999999999988999999999999999999999999653
Q ss_pred CHH--------------HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 875 TRQ--------------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 875 ~~~--------------~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
... ..+...+......+....++..+.+||++||+.||.+||| +.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~ell~ 303 (318)
T 3lxp_A 241 PTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPT----FENLIP 303 (318)
T ss_dssp HHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred chhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcC----HHHHHH
Confidence 221 1122333444555566678999999999999999999999 777763
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-33 Score=336.74 Aligned_cols=226 Identities=20% Similarity=0.263 Sum_probs=180.3
Q ss_pred ccCCCccccc-ccccCCceEEEEEEEeC--CCeEEEEEEeccchh-------------cccc-----------ccCCeEE
Q 002051 666 INLQHFRPIK-PLGSGDTGSVHLVELCG--SGQYFAMKAMDKGVM-------------LNRN-----------KTKTHVC 718 (975)
Q Consensus 666 i~~~~y~i~~-~LG~G~fG~Vy~a~~~~--t~~~vAiK~l~~~~~-------------~~~~-----------~~~~~~~ 718 (975)
+..++|.+.+ +||+|+||.||+|.++. ++..||||+++.... +... .....+|
T Consensus 332 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~ 411 (613)
T 2ozo_A 332 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALM 411 (613)
T ss_dssp CCTTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEE
T ss_pred ccccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeE
Confidence 4455666666 89999999999998863 567899999875310 0000 0345689
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
||||||.+|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 412 lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~ 490 (613)
T 2ozo_A 412 LVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADD 490 (613)
T ss_dssp EEEECCTTCBHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC---
T ss_pred EEEEeCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCC
Confidence 999999999999999754 4569999999999999999999999999999999999999999999999999997643211
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 877 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~ 877 (975)
.. ........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.+..
T Consensus 491 ~~------------------------~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~ 546 (613)
T 2ozo_A 491 SY------------------------YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP 546 (613)
T ss_dssp -----------------------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH
T ss_pred ce------------------------eeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH
Confidence 00 011122346789999999998999999999999999999998 99999998888
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCC
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLG 917 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t 917 (975)
+.+..+..+. ..+.+..++..+.+||.+||..||.+||+
T Consensus 547 ~~~~~i~~~~-~~~~p~~~~~~l~~li~~cl~~dP~~RPs 585 (613)
T 2ozo_A 547 EVMAFIEQGK-RMECPPECPPELYALMSDCWIYKWEDRPD 585 (613)
T ss_dssp HHHHHHHTTC-CCCCCTTCCHHHHHHHHHTTCSSTTTSCC
T ss_pred HHHHHHHcCC-CCCCCCcCCHHHHHHHHHHcCCChhHCcC
Confidence 8877776653 34444568899999999999999999999
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-33 Score=339.37 Aligned_cols=221 Identities=22% Similarity=0.289 Sum_probs=178.4
Q ss_pred cccccCCceEEEEEEE--eCCCeEEEEEEeccchhcc--------------c-----------cccCCeEEEEEeccCCC
Q 002051 675 KPLGSGDTGSVHLVEL--CGSGQYFAMKAMDKGVMLN--------------R-----------NKTKTHVCLITDYCPGG 727 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~--~~t~~~vAiK~l~~~~~~~--------------~-----------~~~~~~~~lV~Ey~~gg 727 (975)
++||+|+||.||+|.+ +.+++.||||+++...... . ......+|||||||++|
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~E~~~~g 454 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG 454 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEEEccCCC
Confidence 4799999999999965 4567899999987542110 0 01345688999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchh
Q 002051 728 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 807 (975)
Q Consensus 728 sL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 807 (975)
+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.+......
T Consensus 455 ~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~------- 525 (635)
T 4fl3_A 455 PLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY------- 525 (635)
T ss_dssp EHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----------
T ss_pred CHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc-------
Confidence 999999874 56999999999999999999999999999999999999999999999999998664321110
Q ss_pred hhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhc
Q 002051 808 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHK 886 (975)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~~i~~~ 886 (975)
........||+.|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+....+..+
T Consensus 526 -----------------~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~ 588 (635)
T 4fl3_A 526 -----------------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 588 (635)
T ss_dssp --------------------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT
T ss_pred -----------------cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence 011223456889999999999999999999999999999998 99999999888877777665
Q ss_pred CCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 887 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 887 ~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
. ..+.+..++.++.+||.+||..||++||| +.+|+
T Consensus 589 ~-~~~~p~~~~~~l~~li~~cl~~dP~~RPs----~~~l~ 623 (635)
T 4fl3_A 589 E-RMGCPAGCPREMYDLMNLCWTYDVENRPG----FAAVE 623 (635)
T ss_dssp C-CCCCCTTCCHHHHHHHHHHTCSSTTTSCC----HHHHH
T ss_pred C-CCCCCCCCCHHHHHHHHHHcCCCHhHCcC----HHHHH
Confidence 3 34445568899999999999999999999 66654
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-33 Score=312.23 Aligned_cols=234 Identities=20% Similarity=0.353 Sum_probs=183.4
Q ss_pred cccCCCcccccccccCCceEEEEEEE----eCCCeEEEEEEeccchh------------c------------ccc--ccC
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVM------------L------------NRN--KTK 714 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~----~~t~~~vAiK~l~~~~~------------~------------~~~--~~~ 714 (975)
.+..++|++++.||+|+||.||+|++ ..+++.||||++..... + ... ...
T Consensus 37 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 116 (326)
T 2w1i_A 37 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 116 (326)
T ss_dssp CCCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC---
T ss_pred ccCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCC
Confidence 45677899999999999999999994 56899999999865310 0 000 123
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCcc
Q 002051 715 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 794 (975)
Q Consensus 715 ~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~ 794 (975)
..+|+||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 117 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~ 195 (326)
T 2w1i_A 117 RNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 195 (326)
T ss_dssp -CCEEEECCCTTCBHHHHHHHS-TTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred CceEEEEECCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence 4789999999999999999875 245899999999999999999999999999999999999999999999999999664
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCC
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 874 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~ 874 (975)
...... ........++..|+|||++.+..++.++|||||||++|+|++|..||...
T Consensus 196 ~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~ 251 (326)
T 2w1i_A 196 PQDKEY------------------------YKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 251 (326)
T ss_dssp CSSCSE------------------------EECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSH
T ss_pred cccccc------------------------cccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCC
Confidence 322110 01122345778899999999888999999999999999999999998642
Q ss_pred CHH---------------HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 875 TRQ---------------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 875 ~~~---------------~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
... ..+...+......+....++..+.+||.+||..||.+||| +.+|++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps----~~el~~ 315 (326)
T 2w1i_A 252 PAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPS----FRDLAL 315 (326)
T ss_dssp HHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCC----HHHHHH
T ss_pred HHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 110 0112233334445555668899999999999999999999 777653
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-34 Score=321.39 Aligned_cols=220 Identities=17% Similarity=0.200 Sum_probs=173.7
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------cccc--------------
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------LNRN-------------- 711 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------~~~~-------------- 711 (975)
+..++|++++.||+|+||+||+|++ +|+.||||++.+... +...
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~ni 94 (336)
T 2vuw_A 17 LPTEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGF 94 (336)
T ss_dssp SCHHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCB
T ss_pred cccccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCch
Confidence 4567899999999999999999998 789999999875421 0000
Q ss_pred -------------------------------------ccCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHH
Q 002051 712 -------------------------------------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVV 754 (975)
Q Consensus 712 -------------------------------------~~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl 754 (975)
....++|||||||++|++.+.+.+ ..+++..++.++.||+
T Consensus 95 v~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 95 IGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLT 171 (336)
T ss_dssp CCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHH
T ss_pred hhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHH
Confidence 016889999999999987766644 5689999999999999
Q ss_pred HHHHHHH-HCCCeecCCCCCCEEEecCC--------------------cEEEeeccCCCccCCCCCCCCCcchhhhhccC
Q 002051 755 VALEYLH-CQGIIYRDLKPENVLLQGNG--------------------HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 813 (975)
Q Consensus 755 ~aL~yLH-~~gIiHrDIKp~NILl~~~g--------------------~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~ 813 (975)
.||.||| ++||+||||||+|||++.++ .+||+|||+|+....
T Consensus 172 ~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~----------------- 234 (336)
T 2vuw_A 172 ASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD----------------- 234 (336)
T ss_dssp HHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-----------------
T ss_pred HHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-----------------
Confidence 9999999 99999999999999999887 899999999965321
Q ss_pred CCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHH-HHHHHhCCCCCCCCCH-HHHHHHHHhc-CCCC
Q 002051 814 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGIL-LYEMLYGYTPFRGKTR-QKTFANILHK-DLKF 890 (975)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~i-l~ell~G~~Pf~~~~~-~~~~~~i~~~-~~~~ 890 (975)
...+||+.|+|||++.+.. +.++||||||++ .++++.|..||.+... ......+... ....
T Consensus 235 ---------------~~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 298 (336)
T 2vuw_A 235 ---------------GIVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKT 298 (336)
T ss_dssp ---------------TEEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSS
T ss_pred ---------------CcEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCc
Confidence 1347999999999999876 889999998777 7778889999954221 1122333322 1111
Q ss_pred CC----CCCCcHHHHHHHHHhcccCccccCCChhhHHHHH-cCCCcc
Q 002051 891 PS----STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK-KHPFFK 932 (975)
Q Consensus 891 p~----~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL-~Hp~f~ 932 (975)
.. ...+++++++||++||++| | ++|+| +||||+
T Consensus 299 ~~~~~~~~~~s~~~~dli~~~L~~d-----s----a~e~l~~Hp~f~ 336 (336)
T 2vuw_A 299 KCNTPAMKQIKRKIQEFHRTMLNFS-----S----ATDLLCQHSLFK 336 (336)
T ss_dssp CCCSHHHHHHHHHHHHHHHHGGGSS-----S----HHHHHHHCGGGC
T ss_pred ccchhhhhhcCHHHHHHHHHHhccC-----C----HHHHHhcCCCcC
Confidence 11 1236788999999999987 7 99999 999995
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-34 Score=342.73 Aligned_cols=238 Identities=26% Similarity=0.378 Sum_probs=184.2
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-------------------------hccc------cccCCe
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------------------MLNR------NKTKTH 716 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------------------~~~~------~~~~~~ 716 (975)
.++|++.+.||+|+||.||+|.+..+|+.||||++.... +... ......
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 478999999999999999999999999999999876431 0000 112677
Q ss_pred EEEEEeccCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc---EEEeeccCCC
Q 002051 717 VCLITDYCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH---VSLTDFDLSC 792 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~-~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~---vkL~DFG~a~ 792 (975)
.|+|||||+||+|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.++. +||+|||++.
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~ 172 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK 172 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccccc
Confidence 899999999999999998743 236899999999999999999999999999999999999997764 9999999996
Q ss_pred ccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCC
Q 002051 793 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 872 (975)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~ 872 (975)
..... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus 173 ~~~~~----------------------------~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~ 224 (676)
T 3qa8_A 173 ELDQG----------------------------ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFL 224 (676)
T ss_dssp BTTSC----------------------------CCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccccc----------------------------cccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCC
Confidence 54311 11234579999999999999999999999999999999999999997
Q ss_pred CCCHHHHHHHH--------------HhcCCCCC----C----CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCC
Q 002051 873 GKTRQKTFANI--------------LHKDLKFP----S----STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930 (975)
Q Consensus 873 ~~~~~~~~~~i--------------~~~~~~~p----~----~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~ 930 (975)
+......+... ..+...+. . ...++..+.+||.+||.+||.+||| +.+++.|||
T Consensus 225 ~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPT----a~elL~hp~ 300 (676)
T 3qa8_A 225 PNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGT----DPQNPNVGC 300 (676)
T ss_dssp SSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---C----CTTCCCCTT
T ss_pred cccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcC----HHHHhcCHH
Confidence 65433221110 01111111 1 1225678999999999999999999 899999999
Q ss_pred ccCCCcc
Q 002051 931 FKGVNWA 937 (975)
Q Consensus 931 f~~~~~~ 937 (975)
|+.++.-
T Consensus 301 F~~l~~i 307 (676)
T 3qa8_A 301 FQALDSI 307 (676)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9976543
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-32 Score=310.41 Aligned_cols=229 Identities=23% Similarity=0.323 Sum_probs=176.9
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------cc--------------ccccC----CeEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------LN--------------RNKTK----THVCLI 720 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------~~--------------~~~~~----~~~~lV 720 (975)
.++|++.+.||+|+||.||+|.+ +|+.||||++..... .. ..... .++|+|
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv 118 (342)
T 1b6c_B 41 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 118 (342)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEE
T ss_pred cccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCchhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEE
Confidence 35799999999999999999998 589999999865321 00 00122 379999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH--------HCCCeecCCCCCCEEEecCCcEEEeeccCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH--------CQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 792 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH--------~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~ 792 (975)
|||+++|+|.+++.. ..+++..+..++.||+.||.||| ++||+||||||+|||++.++.+||+|||++.
T Consensus 119 ~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~ 195 (342)
T 1b6c_B 119 SDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 195 (342)
T ss_dssp ECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCce
Confidence 999999999999986 35899999999999999999999 8999999999999999999999999999986
Q ss_pred ccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC------CCChhHHHHHHHHHHHHHh
Q 002051 793 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG------HTSAVDWWALGILLYEMLY 866 (975)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~------~~~k~DIWSLG~il~ell~ 866 (975)
........ .........||+.|+|||++.+.. ++.++|||||||++|+|++
T Consensus 196 ~~~~~~~~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~t 252 (342)
T 1b6c_B 196 RHDSATDT-----------------------IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 252 (342)
T ss_dssp EEETTTTE-----------------------EEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred eccccccc-----------------------cccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHh
Confidence 54321100 001123457999999999998763 2368999999999999999
Q ss_pred C----------CCCCCCC-----CHHHHHHHHHhcCCCCCCC-----CCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 867 G----------YTPFRGK-----TRQKTFANILHKDLKFPSS-----TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 867 G----------~~Pf~~~-----~~~~~~~~i~~~~~~~p~~-----~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
| ..||... ........+.......... ...+..+.+||.+||+.||.+||| +.+++
T Consensus 253 g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps----~~~i~ 328 (342)
T 1b6c_B 253 RCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT----ALRIK 328 (342)
T ss_dssp TBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCC----HHHHH
T ss_pred ccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCC----HHHHH
Confidence 9 7888664 2233344443433322221 123457899999999999999999 77777
Q ss_pred cC
Q 002051 927 KH 928 (975)
Q Consensus 927 ~H 928 (975)
+|
T Consensus 329 ~~ 330 (342)
T 1b6c_B 329 KT 330 (342)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=4.1e-32 Score=331.35 Aligned_cols=230 Identities=26% Similarity=0.378 Sum_probs=187.3
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCC---CeEEEEEEeccch-------------------------hccccccCCe
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGV-------------------------MLNRNKTKTH 716 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t---~~~vAiK~l~~~~-------------------------~~~~~~~~~~ 716 (975)
.+..++|++.+.||+|+||.||+|.+..+ +..||+|.+.... +... ...+.
T Consensus 386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~-~~~~~ 464 (656)
T 2j0j_A 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENP 464 (656)
T ss_dssp BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEE-ECSSS
T ss_pred ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEE-EecCc
Confidence 45567899999999999999999998654 5689999976421 0011 14566
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
+|+|||||++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 465 ~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~ 543 (656)
T 2j0j_A 465 VWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543 (656)
T ss_dssp CEEEEECCTTCBHHHHHHHT-TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred eEEEEEcCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence 89999999999999999864 34689999999999999999999999999999999999999999999999999966432
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCC
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 875 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~ 875 (975)
... .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+..
T Consensus 544 ~~~--------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~ 597 (656)
T 2j0j_A 544 STY--------------------------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 597 (656)
T ss_dssp ------------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred Ccc--------------------------eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCC
Confidence 110 11123456889999999998899999999999999999997 999999988
Q ss_pred HHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 876 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 876 ~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
..+.+..+.... ..+.+..++..+.+||.+||..||.+||| +.+|++
T Consensus 598 ~~~~~~~i~~~~-~~~~~~~~~~~l~~li~~~l~~dP~~RPs----~~el~~ 644 (656)
T 2j0j_A 598 NNDVIGRIENGE-RLPMPPNCPPTLYSLMTKCWAYDPSRRPR----FTELKA 644 (656)
T ss_dssp HHHHHHHHHHTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred HHHHHHHHHcCC-CCCCCccccHHHHHHHHHHcCCChhHCcC----HHHHHH
Confidence 888887777654 23344568899999999999999999999 666654
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.6e-32 Score=304.08 Aligned_cols=227 Identities=22% Similarity=0.305 Sum_probs=174.6
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccch----------------------------hccccccCCeEEEEE
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV----------------------------MLNRNKTKTHVCLIT 721 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~----------------------------~~~~~~~~~~~~lV~ 721 (975)
.|...+.||+|+||.||+|.+ +++.||+|++.... +.........+|+||
T Consensus 32 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 109 (307)
T 2nru_A 32 ISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVY 109 (307)
T ss_dssp TTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred ccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEE
Confidence 466679999999999999986 68899999986421 011112567789999
Q ss_pred eccCCCCHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCC
Q 002051 722 DYCPGGELFLLLDRQ-PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~-~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 800 (975)
||+++++|.+++... ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 110 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~- 188 (307)
T 2nru_A 110 VYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ- 188 (307)
T ss_dssp ECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSS-
T ss_pred EecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeecccccccccccc-
Confidence 999999999999743 234699999999999999999999999999999999999999999999999999865431110
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~ 880 (975)
........||+.|+|||++.+. ++.++|||||||++|+|++|..||.+......+
T Consensus 189 ------------------------~~~~~~~~g~~~y~aPE~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~ 243 (307)
T 2nru_A 189 ------------------------TVMTSRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL 243 (307)
T ss_dssp ------------------------CEECSSCCSCGGGCCHHHHTTE-ECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBT
T ss_pred ------------------------cccccccCCCcCcCChHHhcCC-CCccchhHHHHHHHHHHHHCCCCcccCcchHHH
Confidence 0112345799999999998764 789999999999999999999999865432221
Q ss_pred ----HHHHhcCC--------CCC-CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 881 ----ANILHKDL--------KFP-SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 881 ----~~i~~~~~--------~~p-~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
..+..... .++ .....+..+.++|.+||+.||.+||| +.+++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps----~~~l~~~ 300 (307)
T 2nru_A 244 LDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPD----IKKVQQL 300 (307)
T ss_dssp THHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCC----HHHHHHH
T ss_pred HHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcC----HHHHHHH
Confidence 22211111 011 11224567899999999999999999 7777653
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-31 Score=292.96 Aligned_cols=204 Identities=16% Similarity=0.129 Sum_probs=161.0
Q ss_pred cccccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------cccccc
Q 002051 661 DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKT 713 (975)
Q Consensus 661 ~~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~ 713 (975)
..+..+..++|++++.||+|+||.||+|.+..+++.||||++..... ......
T Consensus 23 ~~g~~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~ 102 (286)
T 3uqc_A 23 VPGARIANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHT 102 (286)
T ss_dssp CTTCEETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred CCCCEEecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEE
Confidence 34444566889999999999999999999999999999999875421 112225
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 714 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 714 ~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
.+++|+|||||+|++|.+++.. + .....+..++.||+.||.|||++||+||||||+|||++.+|.+||+++|.
T Consensus 103 ~~~~~lv~e~~~g~~L~~~l~~---~-~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~~--- 175 (286)
T 3uqc_A 103 RAGGLVVAEWIRGGSLQEVADT---S-PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPAT--- 175 (286)
T ss_dssp TTEEEEEEECCCEEEHHHHHTT---C-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCCC---
T ss_pred CCcEEEEEEecCCCCHHHHHhc---C-CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEeccc---
Confidence 6789999999999999999954 2 35667888999999999999999999999999999999999999985542
Q ss_pred cCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCC
Q 002051 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 873 (975)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~ 873 (975)
++ .++.++|||||||++|+|++|+.||.+
T Consensus 176 --------------------------------------------~~-------~~~~~~Di~slG~il~elltg~~Pf~~ 204 (286)
T 3uqc_A 176 --------------------------------------------MP-------DANPQDDIRGIGASLYALLVNRWPLPE 204 (286)
T ss_dssp --------------------------------------------CT-------TCCHHHHHHHHHHHHHHHHHSEECSCC
T ss_pred --------------------------------------------cC-------CCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 22 268899999999999999999999987
Q ss_pred CCHHHHHH---HHHhcCCCCC--CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 874 KTRQKTFA---NILHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 874 ~~~~~~~~---~i~~~~~~~p--~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
.+....+. +........+ ....++..+.+||.+||++||.+| | +.++++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s----~~el~~ 258 (286)
T 3uqc_A 205 AGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-S----ASTLLN 258 (286)
T ss_dssp CSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-C----HHHHHH
T ss_pred CCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-C----HHHHHH
Confidence 65432111 1111111111 124578899999999999999999 9 666654
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-31 Score=327.99 Aligned_cols=215 Identities=23% Similarity=0.325 Sum_probs=169.5
Q ss_pred ccCCCcccccccccCCceEEEEEEEeC-CCeEEEEEEeccch-------------hc------------cccccCC----
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGV-------------ML------------NRNKTKT---- 715 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~-t~~~vAiK~l~~~~-------------~~------------~~~~~~~---- 715 (975)
+..++|++++.||+|+||.||+|.+.. +|+.||||++.... ++ .......
T Consensus 77 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 156 (681)
T 2pzi_A 77 IVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGD 156 (681)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSC
T ss_pred EeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCC
Confidence 345799999999999999999999976 79999999885421 00 0011111
Q ss_pred -eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCcc
Q 002051 716 -HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 794 (975)
Q Consensus 716 -~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~ 794 (975)
.+|||||||+|++|.+++.. .+++..++.++.||+.||.|||++||+||||||+|||++.+ .+||+|||+++..
T Consensus 157 ~~~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 157 PVGYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp EEEEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred ceeEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchhc
Confidence 27999999999999988753 59999999999999999999999999999999999999975 8999999998653
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCC
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 874 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~ 874 (975)
.. ....+||+.|+|||++.+. ++.++|||||||++|+|++|.+||.+.
T Consensus 232 ~~-------------------------------~~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~ 279 (681)
T 2pzi_A 232 NS-------------------------------FGYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGR 279 (681)
T ss_dssp TC-------------------------------CSCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTE
T ss_pred cc-------------------------------CCccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccc
Confidence 21 1345799999999999776 488999999999999999999998753
Q ss_pred CHHHHHHHHHhcCCCCCCC---CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCcc
Q 002051 875 TRQKTFANILHKDLKFPSS---TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~~p~~---~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~ 932 (975)
... ..+.. ...+..+.+||.+||++||.+||+ ..+.+.|+|+.
T Consensus 280 ~~~-----------~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~----~~~~l~~~l~~ 325 (681)
T 2pzi_A 280 YVD-----------GLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFT----TAEEMSAQLTG 325 (681)
T ss_dssp ECS-----------SCCTTCHHHHHCHHHHHHHHHHTCSSGGGSCS----SHHHHHHHHHH
T ss_pred ccc-----------cccccccccccCHHHHHHHhhhccCChhhCCC----HHHHHHHHHHH
Confidence 110 11111 123568899999999999999999 66677777764
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-24 Score=260.95 Aligned_cols=162 Identities=16% Similarity=0.167 Sum_probs=109.8
Q ss_pred cccccCCceEEEEEEEeCCCeEEEEEEeccch-----------------------------------hccccccCCeEEE
Q 002051 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-----------------------------------MLNRNKTKTHVCL 719 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-----------------------------------~~~~~~~~~~~~l 719 (975)
..++.|++|.+..++...+|+.||+|++.+.. ++....++..+||
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL 319 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL 319 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence 45778889988888888899999999986541 1223337889999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
|||||+|++|.++|... +.+++. .|+.||+.||+|||++|||||||||+|||++.+|.+||+|||+|+.....
T Consensus 320 VMEyv~G~~L~d~i~~~--~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~-- 392 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAAG--EEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD-- 392 (569)
T ss_dssp EEECCCSEEHHHHHHTT--CCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC----
T ss_pred EEecCCCCcHHHHHHhC--CCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCC--
Confidence 99999999999999875 557664 47899999999999999999999999999999999999999999654321
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCC
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYT 869 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~ 869 (975)
.....+.+||+.|||||++.+. +..++|+||+|++++.+.++..
T Consensus 393 -------------------------~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~ 436 (569)
T 4azs_A 393 -------------------------CSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWS 436 (569)
T ss_dssp --------------------------CCSHHHHHHHHHHHHHHC------------------CCCCTTHH
T ss_pred -------------------------CccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccc
Confidence 1123456899999999999875 6678999999999887755433
|
| >4f3l_A Mclock, circadian locomoter output cycles protein kaput; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.9e-20 Score=211.95 Aligned_cols=107 Identities=11% Similarity=0.010 Sum_probs=97.5
Q ss_pred cCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEccCCcEEE
Q 002051 482 EKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFW 561 (975)
Q Consensus 482 ~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~~kdG~~~w 561 (975)
...++..|.+|. |+|||++++.++||+++|++|+++..++||++.......++..+..|.....++++++|||+.+|
T Consensus 251 ~~f~~~~~~dg~---~~~vn~~~~~ilGY~~eEl~g~~~~~~iHpdD~~~~~~~~~~~l~~g~~~~~eyR~~~kdG~~vW 327 (361)
T 4f3l_A 251 EEFTSRHSLEWK---FLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIW 327 (361)
T ss_dssp CEEEEEECTTSB---EEEECTTSHHHHCCCHHHHTTSBGGGGBCHHHHHHHHHHHHHHHHHSEEECCCEEEECTTSEEEE
T ss_pred ceeEEEEcCCce---EEEECChhhhhhCcCHHHHcCCCHHHeECHHHHHHHHHHHHHHHhCCCcceEEEEEEecCCCEEE
Confidence 456777788555 99999999999999999999999999999999888888888888888877789999999999999
Q ss_pred EEEEEeeeecC-CCCEEEEEEEeecCCcccc
Q 002051 562 NLFHLQPMRDQ-KGEVQYFIGVQLDGSEHLE 591 (975)
Q Consensus 562 v~~~~~pi~d~-~G~i~~~v~i~rDITerk~ 591 (975)
++.+..|++|. +|++.+++|+.+|||+++.
T Consensus 328 v~~~~~~v~~~~~g~~~~iv~~~~dITe~~~ 358 (361)
T 4f3l_A 328 LQTHYYITYHQWNSRPEFIVCTHTVVSYAEV 358 (361)
T ss_dssp EEEEEEEEECTTTCCEEEEEEEEEECCHHHH
T ss_pred EEEEEEEEEcCCCCCeeEEEEEEEECChhHh
Confidence 99999999997 8999999999999999865
|
| >4f3l_B BMAL1B; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-19 Score=207.23 Aligned_cols=108 Identities=12% Similarity=0.062 Sum_probs=93.1
Q ss_pred ccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCc-EEEEEEEEccCCcE
Q 002051 481 IEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD-VTVQLINYTKSGKK 559 (975)
Q Consensus 481 ~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~-~~~e~~~~~kdG~~ 559 (975)
..+.++..|.+|. |+|||++++.++||+++|++|+++..++||++...+...+...+..++. ...++++++|||+.
T Consensus 277 ~~~fi~~~~~dg~---~~~vn~~~~~ilGY~~eEl~g~~~~~~iHpdD~~~~~~~~~~~l~~~~~~~~~eyR~~~kdG~~ 353 (387)
T 4f3l_B 277 SMEYVSRHAIDGK---FVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF 353 (387)
T ss_dssp CCEEEEEECTTSB---EEEECTHHHHHHCCCHHHHTTSBGGGTBCHHHHHHHHHHHHHHTTCSSCEECCCEEEECTTSCE
T ss_pred CceEEEEECCCCE---EEEECCCcccccCCCHHHHcCCcHHHeeCHHHHHHHHHHHHHHHhcCCCeeeEEEEEEccCCCE
Confidence 4567888888666 9999999999999999999999999999999988888888888766554 55799999999999
Q ss_pred EEEEEEEeeeecC-CCCEEEEEEEeecCCcccc
Q 002051 560 FWNLFHLQPMRDQ-KGEVQYFIGVQLDGSEHLE 591 (975)
Q Consensus 560 ~wv~~~~~pi~d~-~G~i~~~v~i~rDITerk~ 591 (975)
+|++.+..+++|. +|++.+++|+.+|||+||+
T Consensus 354 vWv~~~~~~~~~~~~g~~~~ivg~~~dIT~Rk~ 386 (387)
T 4f3l_B 354 ITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVL 386 (387)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEEEECC----
T ss_pred EEEEEEEEEEECCCCCCEEEEEEEEEEcchhhc
Confidence 9999999999997 8899999999999999975
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=9.1e-21 Score=225.80 Aligned_cols=167 Identities=16% Similarity=0.148 Sum_probs=120.9
Q ss_pred ccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------------ccccccCCeEEE
Q 002051 672 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------------LNRNKTKTHVCL 719 (975)
Q Consensus 672 ~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------------~~~~~~~~~~~l 719 (975)
...+.||+|+||.||+| ...++.+|+|....... ........+.||
T Consensus 339 ~~~~~LG~G~fg~Vy~~--~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l 416 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRD--SYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI 416 (540)
T ss_dssp ---------CCEEEEEE--ECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred CCCCEEeeCCCEEEEEE--EECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence 44568999999999999 34678899997533210 000113456699
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
|||||+|++|.+++.. +..++.||+.||.|||++||+||||||+|||++. .+||+|||+|+.......
T Consensus 417 VmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~ 484 (540)
T 3en9_A 417 MMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDED 484 (540)
T ss_dssp EEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHH
T ss_pred EEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCccc
Confidence 9999999999999864 5689999999999999999999999999999998 999999999976542100
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC--CCCCChhHHHHHHHHHHHHHhCCCCCC
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFR 872 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~~~k~DIWSLG~il~ell~G~~Pf~ 872 (975)
.. ..........+||+.|||||++.. ..|+..+|+|+..+-..+.+.++.+|.
T Consensus 485 ---------~~-----------~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 485 ---------KA-----------VDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp ---------HH-----------HHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ---------cc-----------cchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 00 000001235689999999999987 567778999999999999888777763
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=3.2e-20 Score=202.78 Aligned_cols=111 Identities=16% Similarity=0.108 Sum_probs=90.7
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc----------------------------------c----cc
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML----------------------------------N----RN 711 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~----------------------------------~----~~ 711 (975)
.|.+.+.||+|+||.||+|.+ .+|+.||||+++..... . ..
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~~~v~~~ 169 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKV 169 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCE
T ss_pred EEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccCCCcCeE
Confidence 456669999999999999999 88999999998632100 0 00
Q ss_pred ccCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCC
Q 002051 712 KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 791 (975)
Q Consensus 712 ~~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a 791 (975)
...+..|+|||||+|++|.+ +.. .....++.||+.||.|||++||+||||||+|||++ ++.+||+|||+|
T Consensus 170 ~~~~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG~a 239 (282)
T 1zar_A 170 YAWEGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFPQS 239 (282)
T ss_dssp EEEETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCTTC
T ss_pred EeccceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECCCC
Confidence 12345699999999999988 421 23457999999999999999999999999999999 999999999988
|
| >2gj3_A Nitrogen fixation regulatory protein; PAS domain, FAD, redox sensor, atomic resolution, transferase; HET: FAD; 1.04A {Azotobacter vinelandii} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.1e-18 Score=161.91 Aligned_cols=119 Identities=26% Similarity=0.460 Sum_probs=110.5
Q ss_pred chHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEE
Q 002051 186 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG 265 (975)
Q Consensus 186 ~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~ 265 (975)
++.++|+.+++.++++|+++|. +|+|+|+|++|++++||+.+|++|+++..+.++.........++..+..+..+.+
T Consensus 2 ~~~~~~~~~~~~~~~~i~~~d~---~g~i~~~N~a~~~~~G~~~~elig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (120)
T 2gj3_A 2 LLPEIFRQTVEHAPIAISITDL---KANILYANRAFRTITGYGSEEVLGKNESILSNGTTPRLVYQALWGRLAQKKPWSG 78 (120)
T ss_dssp CCHHHHHHHHHHCSSEEEEECT---TCBEEEECHHHHHHHCCCTTGGGGCBGGGGCCTTSCHHHHHHHHHHHHTTCCEEE
T ss_pred hhHHHHHHHHHhCCCeEEEECC---CCCEEeehHHHHHHHCcCHHHHcCCCHHHcCCCCCCHHHHHHHHHHHHcCCCEEE
Confidence 3457899999999999999999 9999999999999999999999999988888877777777888889999999999
Q ss_pred EEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhh
Q 002051 266 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHT 307 (975)
Q Consensus 266 e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk 307 (975)
++..+++||+.+|+++++.|++|.+|.+.+++++++|||++|
T Consensus 79 e~~~~~~dG~~~~~~~~~~pi~~~~g~~~~~v~~~~DITe~k 120 (120)
T 2gj3_A 79 VLVNRRKDKTLYLAELTVAPVLNEAGETIYYLGMHRDTSELH 120 (120)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCSCC
T ss_pred EEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEeccCcccC
Confidence 999999999999999999999999999999999999999975
|
| >2gj3_A Nitrogen fixation regulatory protein; PAS domain, FAD, redox sensor, atomic resolution, transferase; HET: FAD; 1.04A {Azotobacter vinelandii} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.2e-18 Score=160.62 Aligned_cols=114 Identities=25% Similarity=0.403 Sum_probs=106.9
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~ 553 (975)
|+.++++++++|+++|.+|+ |+|+|++|++++||+.+|++|++...+.+++........+...+..+..+.++++.+
T Consensus 7 ~~~~~~~~~~~i~~~d~~g~---i~~~N~a~~~~~G~~~~elig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 83 (120)
T 2gj3_A 7 FRQTVEHAPIAISITDLKAN---ILYANRAFRTITGYGSEEVLGKNESILSNGTTPRLVYQALWGRLAQKKPWSGVLVNR 83 (120)
T ss_dssp HHHHHHHCSSEEEEECTTCB---EEEECHHHHHHHCCCTTGGGGCBGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred HHHHHHhCCCeEEEECCCCC---EEeehHHHHHHHCcCHHHHcCCCHHHcCCCCCCHHHHHHHHHHHHcCCCEEEEEEEE
Confidence 88999999999999999777 999999999999999999999998888888777777778888888999999999999
Q ss_pred ccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCccc
Q 002051 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHL 590 (975)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk 590 (975)
++||+.+|++++++|++|.+|.+.+++++++|||++|
T Consensus 84 ~~dG~~~~~~~~~~pi~~~~g~~~~~v~~~~DITe~k 120 (120)
T 2gj3_A 84 RKDKTLYLAELTVAPVLNEAGETIYYLGMHRDTSELH 120 (120)
T ss_dssp CTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCSCC
T ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEeccCcccC
Confidence 9999999999999999999999999999999999986
|
| >4hia_A LOV protein; PAS, HTH, signaling protein; HET: FMN; 1.95A {Rhodobacter sphaeroides} PDB: 4hnb_A* 4hj4_A* 4hj6_A* 4hj3_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=3.3e-18 Score=171.76 Aligned_cols=138 Identities=26% Similarity=0.466 Sum_probs=122.4
Q ss_pred hHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEE
Q 002051 187 VSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGR 266 (975)
Q Consensus 187 ~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e 266 (975)
..+.|+.++++++++|+++|...++|+|+++|++|++++||+.+|++|+++..+.++.........+...+..+..+..+
T Consensus 5 ~~~~~~~~~~~~~~~i~~~d~~~~~g~i~~~N~a~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 84 (176)
T 4hia_A 5 QFEKIRAVFDRSGVALTLVDMSLPEQPVVLANPPFLRMTGYTEGQILGFNCRFLQRGDENAQARADIRDALKLGRELQVV 84 (176)
T ss_dssp HHHHHHHHHHHCSSCCEEEETTSTTCCEEEECHHHHHHHTCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHhcCCCcEEEEecCCCCCcEEEECHHHHHHHCcCHHHHcCCCcceeeCCCCCHHHHHHHHHHHHcCCceEEE
Confidence 45678999999999999999922229999999999999999999999999988888888888888999999999999999
Q ss_pred EEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHhhhc----CCCCCchhh
Q 002051 267 LLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML----RPNGLPESL 324 (975)
Q Consensus 267 ~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~~----~~~~l~~r~ 324 (975)
+..+++||+.+|+.+++.|+++.+|.+.+++++++|||++|++|+++++ .+++++||.
T Consensus 85 ~~~~~~dG~~~~~~~~~~pi~~~~g~~~~~~~~~~DITe~k~~e~~~~~a~~d~LtgL~NR~ 146 (176)
T 4hia_A 85 LRNYRANDEPFDNLLFLHPVGGRPDAPDYFLGSQFELGRSGNSEEAAAAGHAGALTGELARI 146 (176)
T ss_dssp EEEECTTCCEEEEEEEEEEESSBTTBCSEEEEEEEEESSSGGGHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEcCCCCEEEEEEEEEEeeCCCCCeEEEEEEEEECcHhhHHHHHHHHhhhhHHhhhhhhh
Confidence 9999999999999999999999999999999999999999999988433 255566653
|
| >1n9l_A PHOT-LOV1, putative blue light receptor; phototropin, flavin, electron transport; HET: FMN; 1.90A {Chlamydomonas reinhardtii} SCOP: d.110.3.6 PDB: 1n9n_A* 1n9o_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.5e-17 Score=153.62 Aligned_cols=108 Identities=60% Similarity=1.139 Sum_probs=101.0
Q ss_pred ccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCCEE
Q 002051 198 FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPF 277 (975)
Q Consensus 198 ~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~ 277 (975)
++++|+++|..+++|+|+|+|++|++++||+.+|++|+++..+.++.........++.++..++.+.+++.+++|||+.+
T Consensus 2 ~~~~i~i~d~~~~~g~i~~~N~a~~~l~Gy~~~e~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~kdG~~~ 81 (109)
T 1n9l_A 2 LRHTFVVADATLPDCPLVYASEGFYAMTGYGPDEVLGHNCRFLQGEGTDPKEVQKIRDAIKKGEACSVRLLNYRKDGTPF 81 (109)
T ss_dssp CSCEEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEEEEECTTSCEE
T ss_pred CccEEEEEcCCCCCCeEEEEchHHHHHHCcCHHHHcCCCchhcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEcCCCCEE
Confidence 67899999975558999999999999999999999999988888888887888899999999999999999999999999
Q ss_pred EEEEEeeeeecCCCCEEEEEEEEeccch
Q 002051 278 WNLLTIAPIKDDEGKVLKFIGMQVEVSK 305 (975)
Q Consensus 278 w~~~~i~pi~d~~G~v~~~v~~~rDITe 305 (975)
|+++++.|++|++|++.+++++++|||+
T Consensus 82 ~~~~~~~pi~d~~G~~~~~v~~~~DITe 109 (109)
T 1n9l_A 82 WNLLTVTPIKTPDGRVSKFVGVQVDVTS 109 (109)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEECCC
T ss_pred EEEEEEEEEECCCCCEEEEEEEEEeCCC
Confidence 9999999999999999999999999995
|
| >2pr5_A Blue-light photoreceptor; light-oxygen-voltage, LOV, PER-ARNT-SIM, PAS, flavoprotein, protein; HET: FMN; 1.45A {Bacillus subtilis} PDB: 2pr6_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.9e-17 Score=158.21 Aligned_cols=116 Identities=47% Similarity=0.848 Sum_probs=101.5
Q ss_pred HHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEc
Q 002051 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYT 554 (975)
Q Consensus 475 ~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~~ 554 (975)
+.++++++++|+++|.+|.+|.|+|||++|++++||+.+|++|+++..+.+++........+...+..+..+..+++.++
T Consensus 2 ~~~~~~~~~~i~~~d~~g~~~~i~~~N~a~~~~~G~~~~el~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 81 (132)
T 2pr5_A 2 SHMLDHVRVGVVITDPALEDNPIVYVNQGFVQMTGYETEEILGKNCRFLQGKHTDPAEVDNIRTALQNKEPVTVQIQNYK 81 (132)
T ss_dssp ----CCCCCEEEEECTTSTTCCEEEECHHHHHHHSCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEEEEEC
T ss_pred hhHHhcCCCcEEEEeCCCCCCcEEEECHHHHHHhCcCHHHHcCCChhhhCCCCCCHHHHHHHHHHHHcCCCeEEEEEEEe
Confidence 35789999999999997644569999999999999999999999988888888777777788888888889999999999
Q ss_pred cCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCccccc
Q 002051 555 KSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 592 (975)
Q Consensus 555 kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~ 592 (975)
+||+.+|++++++|+++++ +.+++++++|||++|++
T Consensus 82 kdG~~~~~~~~~~~~~~~~--~~~~~~~~~DITe~k~~ 117 (132)
T 2pr5_A 82 KDGTMFWNELNIDPMEIED--KTYFVGIQNDITKQKEY 117 (132)
T ss_dssp TTSCEEEEEEEEEEEEETT--EEEEEEEEEECHHHHHH
T ss_pred cCCCeeeeEEEEEeccCCC--eeEEEEEEEeCcHHHHH
Confidence 9999999999999999865 88999999999999983
|
| >1n9l_A PHOT-LOV1, putative blue light receptor; phototropin, flavin, electron transport; HET: FMN; 1.90A {Chlamydomonas reinhardtii} SCOP: d.110.3.6 PDB: 1n9n_A* 1n9o_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=3.5e-17 Score=151.15 Aligned_cols=108 Identities=45% Similarity=0.912 Sum_probs=99.5
Q ss_pred ccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEccCCcEE
Q 002051 481 IEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKF 560 (975)
Q Consensus 481 ~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~~kdG~~~ 560 (975)
++++|+++|....+|+|+|+|++|++++||+.+|++|+++..+.+++......+.++..+..+..+..++++++|||+.+
T Consensus 2 ~~~~i~i~d~~~~~g~i~~~N~a~~~l~Gy~~~e~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~kdG~~~ 81 (109)
T 1n9l_A 2 LRHTFVVADATLPDCPLVYASEGFYAMTGYGPDEVLGHNCRFLQGEGTDPKEVQKIRDAIKKGEACSVRLLNYRKDGTPF 81 (109)
T ss_dssp CSCEEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEEEEECTTSCEE
T ss_pred CccEEEEEcCCCCCCeEEEEchHHHHHHCcCHHHHcCCCchhcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEcCCCCEE
Confidence 57899999964335569999999999999999999999988888888888788889999999999999999999999999
Q ss_pred EEEEEEeeeecCCCCEEEEEEEeecCCc
Q 002051 561 WNLFHLQPMRDQKGEVQYFIGVQLDGSE 588 (975)
Q Consensus 561 wv~~~~~pi~d~~G~i~~~v~i~rDITe 588 (975)
|++++++|++|++|.+.+++++++|||+
T Consensus 82 ~~~~~~~pi~d~~G~~~~~v~~~~DITe 109 (109)
T 1n9l_A 82 WNLLTVTPIKTPDGRVSKFVGVQVDVTS 109 (109)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEECCC
T ss_pred EEEEEEEEEECCCCCEEEEEEEEEeCCC
Confidence 9999999999999999999999999996
|
| >2pr5_A Blue-light photoreceptor; light-oxygen-voltage, LOV, PER-ARNT-SIM, PAS, flavoprotein, protein; HET: FMN; 1.45A {Bacillus subtilis} PDB: 2pr6_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=3.4e-17 Score=156.33 Aligned_cols=122 Identities=41% Similarity=0.722 Sum_probs=105.6
Q ss_pred HHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEe
Q 002051 192 KDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYK 271 (975)
Q Consensus 192 ~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~ 271 (975)
+.++++++++|+++|..+.+|+|+|+|++|++++||+.+|++|+++..+.++.........++..+..+..+..++..++
T Consensus 2 ~~~~~~~~~~i~~~d~~g~~~~i~~~N~a~~~~~G~~~~el~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 81 (132)
T 2pr5_A 2 SHMLDHVRVGVVITDPALEDNPIVYVNQGFVQMTGYETEEILGKNCRFLQGKHTDPAEVDNIRTALQNKEPVTVQIQNYK 81 (132)
T ss_dssp ----CCCCCEEEEECTTSTTCCEEEECHHHHHHHSCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEEEEEC
T ss_pred hhHHhcCCCcEEEEeCCCCCCcEEEECHHHHHHhCcCHHHHcCCChhhhCCCCCCHHHHHHHHHHHHcCCCeEEEEEEEe
Confidence 35789999999999983223499999999999999999999999988887877777777888888888999999999999
Q ss_pred cCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHhhhc
Q 002051 272 KDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (975)
Q Consensus 272 kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~~ 315 (975)
|||+.+|+++++.|+.+++ +.+++++++|||++|++|++|+.
T Consensus 82 kdG~~~~~~~~~~~~~~~~--~~~~~~~~~DITe~k~~e~~l~~ 123 (132)
T 2pr5_A 82 KDGTMFWNELNIDPMEIED--KTYFVGIQNDITKQKEYEKLLED 123 (132)
T ss_dssp TTSCEEEEEEEEEEEEETT--EEEEEEEEEECHHHHHHHHHHHH
T ss_pred cCCCeeeeEEEEEeccCCC--eeEEEEEEEeCcHHHHHHHHHHH
Confidence 9999999999999998765 88999999999999999998763
|
| >4hia_A LOV protein; PAS, HTH, signaling protein; HET: FMN; 1.95A {Rhodobacter sphaeroides} PDB: 4hnb_A* 4hj4_A* 4hj6_A* 4hj3_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=4.4e-17 Score=163.48 Aligned_cols=122 Identities=29% Similarity=0.540 Sum_probs=111.9
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~ 553 (975)
|+.++++++++|+++|.+..+|.|++||++|++++||+++|++|+++..+.+++........+...+..+..+..++...
T Consensus 9 ~~~~~~~~~~~i~~~d~~~~~g~i~~~N~a~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 88 (176)
T 4hia_A 9 IRAVFDRSGVALTLVDMSLPEQPVVLANPPFLRMTGYTEGQILGFNCRFLQRGDENAQARADIRDALKLGRELQVVLRNY 88 (176)
T ss_dssp HHHHHHHCSSCCEEEETTSTTCCEEEECHHHHHHHTCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEEEEE
T ss_pred HHHHHhcCCCcEEEEecCCCCCcEEEECHHHHHHHCcCHHHHcCCCcceeeCCCCCHHHHHHHHHHHHcCCceEEEEEEE
Confidence 89999999999999999711134999999999999999999999999889999988888888999999999999999999
Q ss_pred ccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccccccC
Q 002051 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRN 595 (975)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~e~~ 595 (975)
++||+.+|+.+++.|++|.+|.+.+++++++|||++|+++++
T Consensus 89 ~~dG~~~~~~~~~~pi~~~~g~~~~~~~~~~DITe~k~~e~~ 130 (176)
T 4hia_A 89 RANDEPFDNLLFLHPVGGRPDAPDYFLGSQFELGRSGNSEEA 130 (176)
T ss_dssp CTTCCEEEEEEEEEEESSBTTBCSEEEEEEEEESSSGGGHHH
T ss_pred cCCCCEEEEEEEEEEeeCCCCCeEEEEEEEEECcHhhHHHHH
Confidence 999999999999999999999999999999999999986544
|
| >3rty_A Period circadian protein; PAS domain, signalling, timeless, circadian clock protein; 2.85A {Drosophila melanogaster} PDB: 1wa9_A 3gec_A | Back alignment and structure |
|---|
Probab=99.71 E-value=8.9e-17 Score=178.56 Aligned_cols=138 Identities=9% Similarity=0.037 Sum_probs=107.8
Q ss_pred cCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCc-----EEEEEEEEccC
Q 002051 482 EKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD-----VTVQLINYTKS 556 (975)
Q Consensus 482 ~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~-----~~~e~~~~~kd 556 (975)
.+.++..+.+|. |+|+|+++..++||+++|++|+++..++||++.....+.++..+..|.. ...+++++++|
T Consensus 154 ~~fi~r~~~dG~---~~yvn~~~~~lLGY~peELiG~s~~~~vHPdD~~~~~~~~~~~l~~G~~~~~~~~s~~yR~~~kd 230 (339)
T 3rty_A 154 PKFAIRHTATGI---ISHVDSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQN 230 (339)
T ss_dssp CEEEEEEETTCB---EEEECTTHHHHHCCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHHHHTTSTTCCCBCCCEEEECTT
T ss_pred ceEEEEECCCCe---EEEcChhhhcccCCCHHHHcCCcHHHEECHHHHHHHHHHHHHHHHcCCcccccccceEEEEEccC
Confidence 456777888666 9999999999999999999999999999999998888888888887764 35789999999
Q ss_pred CcEEEEEEEEeeeecC-CCCEEEEEEEeecCCcccccc--cCCC--cchhhHHHHHHHHHHhhhhhhhhhc
Q 002051 557 GKKFWNLFHLQPMRDQ-KGEVQYFIGVQLDGSEHLEPL--RNSI--PEATAEESEKLVKQTAENVNEAVKE 622 (975)
Q Consensus 557 G~~~wv~~~~~pi~d~-~G~i~~~v~i~rDITerk~~e--~~~~--~~~~~~e~~~~v~~~~~~i~~~v~~ 622 (975)
|+.+|++.+.++++|. .+++.+++|+.+.|+....+. +... .....++....++.+.++|...+.+
T Consensus 231 G~~vWlet~~~~~~np~s~~~~~II~~h~vi~~p~~~dvf~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 301 (339)
T 3rty_A 231 GCYVLLETEWTSFVNPWSRKLEFVVGHHRVFQGPKQCNVFEAAPTCKLKISEEAQSRNTRIKEDIVKRLAE 301 (339)
T ss_dssp SCEEEEEEEEEEEECTTTCSEEEEEEEEEEEECCSSSCSSSSCCSCCCCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCEEEEEEEEEEEECCCCCCeeEEEEEEEECCCCCCCCcccCCCcccccCCHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999996 467889999999999987652 1111 1123344444555555666655544
|
| >3ue6_A Aureochrome1; PAS/LOV domain, FMN-binding blue-light photoreceptor, signal protein; HET: FMN; 2.75A {Vaucheria frigida} PDB: 3ulf_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1e-16 Score=158.31 Aligned_cols=141 Identities=40% Similarity=0.715 Sum_probs=119.9
Q ss_pred ccccccccccCcchHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHH
Q 002051 174 MSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKI 253 (975)
Q Consensus 174 i~~~~~~e~~L~~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l 253 (975)
..+.++.++.+......++.++++++++|+++|...++|+|+++|++|++++||+.++++|+++..+.++.........+
T Consensus 20 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~g~i~~~N~~~~~l~G~~~~e~~g~~~~~l~~~~~~~~~~~~~ 99 (166)
T 3ue6_A 20 TDNPSKANRILEDPDYSLVKALQMAQQNFVITDASLPDNPIVYASRGFLTLTGYSLDQILGRNCRFLQGPETDPRAVDKI 99 (166)
T ss_dssp -----------CCCCCHHHHHHHHTTSCEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHH
T ss_pred ehhhhHHHHHHHHHHHHHHHHHhcCCceEEEEEccCCCCcEEEECHHHHHHhCcCHHHHcCCCHhheeCCCCCHHHHHHH
Confidence 34566778888888999999999999999999983335999999999999999999999999998888888888888889
Q ss_pred HHHHHcCCcEEEEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHhhh
Q 002051 254 RETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (975)
Q Consensus 254 ~~~l~~g~~~~~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~ 314 (975)
...+..+..+..++..++++|..+|+.+++.|+.+.+|.+.+++++++|||++|+++...+
T Consensus 100 ~~~~~~~~~~~~e~~~~~~~g~~~~~~~~~~~i~~~~g~~~~~~~~~~DITe~k~~~~~~e 160 (166)
T 3ue6_A 100 RNAITKGVDTSVCLLNYRQDGTTFWNLFFVAGLRDSKGNIVNYVGVQSKVSEDYAKLLVNE 160 (166)
T ss_dssp HHHHHHTCCEEEEEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEECCBCCHHHHHHHHHH
T ss_pred HHHHhcCCceEEEEEEEcCCCCEEEEEEEEEeeeCCCCCEEEEEEEEEechHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999876643
|
| >3f1p_B ARYL hydrocarbon receptor nuclear translocator; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.0 PDB: 3f1o_B* 3f1n_B 3h7w_B* 3h82_B* 1x0o_A 2hv1_A 4h6j_B 2b02_A* 2k7s_A 2a24_B | Back alignment and structure |
|---|
Probab=99.69 E-value=4.1e-17 Score=153.00 Aligned_cols=115 Identities=12% Similarity=0.166 Sum_probs=101.1
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHH-cCCcEEEEEEE
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAID-NQTDVTVQLIN 552 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~-~g~~~~~e~~~ 552 (975)
++.+++++++.|+++|.+|+ |+|+|+++++++||+++|++|+++..++||++.....+.+...+. .+..+..++++
T Consensus 4 ~~ll~e~~~d~i~~~d~~g~---i~~~n~~~~~~~G~~~~el~g~~~~~~i~p~d~~~~~~~~~~~~~~~~~~~~~e~r~ 80 (121)
T 3f1p_B 4 KGLNVCQPTRFISRHNIEGI---FTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRF 80 (121)
T ss_dssp ----CCCCCEEEEEECTTSB---EEEECTTHHHHHSCCGGGTTTSBGGGGBCTTTHHHHHHHHHHHTTSTTCCEEEEEEE
T ss_pred ccceecCCCceEEEECCCce---EEEECcchhhhhCCChHHHcCCCHHHeECHHHHHHHHHHHHHHHhcCCCcccEEEEE
Confidence 55678999999999999776 999999999999999999999999999999998888888888774 55578999999
Q ss_pred EccCCcEEEEEEEEeeeecC-CCCEEEEEEEeecCCcccc
Q 002051 553 YTKSGKKFWNLFHLQPMRDQ-KGEVQYFIGVQLDGSEHLE 591 (975)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~-~G~i~~~v~i~rDITerk~ 591 (975)
+++||+.+|++++..|++|. +|.+.+++++++|||++|+
T Consensus 81 ~~~dG~~~w~~~~~~~~~~~~~g~~~~iv~~~~DIT~~kq 120 (121)
T 3f1p_B 81 RSKNQEWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQ 120 (121)
T ss_dssp ECTTSCEEEEEEEEEEECCTTCCCCCEEEEEEEECCCC--
T ss_pred EecCCCEEEEEEEEEEEECCCCCceeEEEEEeEEcccccC
Confidence 99999999999999999997 7899999999999999986
|
| >3p7n_A Sensor histidine kinase; LOV domain, light-activated transcription factor, DNA bindin; HET: FMN; 2.10A {Erythrobacter litoralis} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.6e-16 Score=170.60 Aligned_cols=135 Identities=38% Similarity=0.612 Sum_probs=110.9
Q ss_pred ccccccccccCcchHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHH
Q 002051 174 MSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKI 253 (975)
Q Consensus 174 i~~~~~~e~~L~~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l 253 (975)
+......+++++++.+.|+.++++++++|+++|..+.+|+|+|+|++|++++||+.+|++|+++..+.+++........+
T Consensus 48 ~~~~~~~~~~l~~~~~~~~~i~~~~~~~i~~~d~~~~~g~i~~~N~a~~~l~G~~~~el~g~~~~~l~~~~~~~~~~~~~ 127 (258)
T 3p7n_A 48 APGADDTRVEVQPPAQWVLDLIEASPIASVVSDPRLADNPLIAINQAFTDLTGYSEEECVGRNCRFLAGSGTEPWLTDKI 127 (258)
T ss_dssp -------------CCHHHHHHHHTCSSEEEEECTTSTTCCEEEECHHHHHHHCCCGGGTTTSCGGGGCCTTCCHHHHHHH
T ss_pred CCcchhhHHHHHhHHHHHHHHHhcCCccEEEEcCCCCCCcEEEEhHHHHHHcCCCHHHHCCCChhhccCCCCchhHHHHH
Confidence 34444567778999999999999999999999984446779999999999999999999999999999999889888999
Q ss_pred HHHHHcCCcEEEEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhH
Q 002051 254 RETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTE 308 (975)
Q Consensus 254 ~~~l~~g~~~~~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~ 308 (975)
...+..+..+..++..+++||+.+|+.+++.|++|.+|.+.+++++++|||++|+
T Consensus 128 ~~~l~~~~~~~~e~~~~~~dG~~~~~~~~~~pi~d~~g~~~~~v~~~~DITerk~ 182 (258)
T 3p7n_A 128 RQGVREHKPVLVEILNYKKDGTPFRNAVLVAPIYDDDDELLYFLGSQVEVDDDQP 182 (258)
T ss_dssp HHHHHHTCCEEEEEEEECTTSCEEEEEEEEEEEECTTSCSEEEEEEEEEC-----
T ss_pred HHHHHcCCCeEEEEEEEcCCCCEEEEeeEEEEEEcCCCCEEEEEEEeeecchhhh
Confidence 9999999999999999999999999999999999999999999999999999943
|
| >3ewk_A Sensor protein; PAS domain, alpha/beta fold, kinase, phosphoprotein, transfe flavoprotein; HET: FAD; 2.34A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=99.69 E-value=9.4e-17 Score=169.15 Aligned_cols=130 Identities=24% Similarity=0.503 Sum_probs=120.7
Q ss_pred CccceeccccccccccccCcchHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCC
Q 002051 166 NSVRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGT 245 (975)
Q Consensus 166 ~~~~~~~di~~~~~~e~~L~~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~ 245 (975)
+.++...|||++|+.+++|+ .++.++++++++|+++|. +|+|+++|++|++++||+.+|++|+++..+.++..
T Consensus 92 ~~~~~~~DIT~~k~~e~~l~----~~~~~~~~~~~~i~~~d~---~g~i~~~N~~~~~~~G~~~~e~~g~~~~~l~~~~~ 164 (227)
T 3ewk_A 92 QYISIRRDITAQKEAEAQLA----RLKQAMDANSEMILLTDR---AGRIIYANPALCRFSGMAEGELLGQSPSILDSPLA 164 (227)
T ss_dssp EEEEEEEECTTTTHHHHHHH----HHHHHHHTCCSEEEEECT---TSCEEEECHHHHHHHTCCTHHHHSSCGGGGBCTTS
T ss_pred EEEEEEEehhhHHHHHHHHH----HHHHHHhcCcCeEEEEcC---CCcEEEEchHHHHHhCCCHHHHcCCChhhccCCCC
Confidence 45667799999999888774 567889999999999999 99999999999999999999999999998989888
Q ss_pred CHHHHHHHHHHHHcCCcEEEEEEEEecCCC------EEEEEEEeeeeecCCCCEEEEEEEEec
Q 002051 246 DPEDVAKIRETLQNGQSYCGRLLNYKKDGT------PFWNLLTIAPIKDDEGKVLKFIGMQVE 302 (975)
Q Consensus 246 ~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~------~~w~~~~i~pi~d~~G~v~~~v~~~rD 302 (975)
.......++..+..++.+.+++..++|||+ .+|+++++.|++|.+|++++++++++|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~e~~~~~k~G~~~~dg~~~~~~~~~~pi~d~~g~~~~~v~i~~D 227 (227)
T 3ewk_A 165 DQETLAAMQEALQAGQPWSGRLLNRRRTGPAPHDAEDYWAEISTTPIHTDGNGLVGYVQIQHD 227 (227)
T ss_dssp CHHHHHHHHHHHHHTCCEECCEEEEEECCSSSSCEEEEEEEEEEEEEECSSSCEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHcCCceeEEEEEECCCCCcCcccceEEEEEEEEEEECCCCCEEEEEEEecC
Confidence 999999999999999999999999999997 899999999999999999999999988
|
| >3p7n_A Sensor histidine kinase; LOV domain, light-activated transcription factor, DNA bindin; HET: FMN; 2.10A {Erythrobacter litoralis} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.1e-16 Score=171.94 Aligned_cols=133 Identities=35% Similarity=0.592 Sum_probs=107.2
Q ss_pred hhhHHHHHHHhhc-CcHHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHH
Q 002051 459 VDDKVRQKEMRKG-IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIR 537 (975)
Q Consensus 459 ~er~~~~~~l~~~-~~l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~ 537 (975)
..+...+++++.. ..|+.++++++++|+++|..+.+|.|+|||++|++++||+++|++|+++..+.++++.......+.
T Consensus 49 ~~~~~~~~~l~~~~~~~~~i~~~~~~~i~~~d~~~~~g~i~~~N~a~~~l~G~~~~el~g~~~~~l~~~~~~~~~~~~~~ 128 (258)
T 3p7n_A 49 PGADDTRVEVQPPAQWVLDLIEASPIASVVSDPRLADNPLIAINQAFTDLTGYSEEECVGRNCRFLAGSGTEPWLTDKIR 128 (258)
T ss_dssp ------------CCHHHHHHHHTCSSEEEEECTTSTTCCEEEECHHHHHHHCCCGGGTTTSCGGGGCCTTCCHHHHHHHH
T ss_pred CcchhhHHHHHhHHHHHHHHHhcCCccEEEEcCCCCCCcEEEEhHHHHHHcCCCHHHHCCCChhhccCCCCchhHHHHHH
Confidence 3334444444444 448999999999999999933233499999999999999999999999999999999999888999
Q ss_pred HHHHcCCcEEEEEEEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccc
Q 002051 538 AAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (975)
Q Consensus 538 ~~l~~g~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~ 591 (975)
..+..+..+..+++.+++||+.+|+.+++.|++|.+|.+.+++++++|||++|+
T Consensus 129 ~~l~~~~~~~~e~~~~~~dG~~~~~~~~~~pi~d~~g~~~~~v~~~~DITerk~ 182 (258)
T 3p7n_A 129 QGVREHKPVLVEILNYKKDGTPFRNAVLVAPIYDDDDELLYFLGSQVEVDDDQP 182 (258)
T ss_dssp HHHHHTCCEEEEEEEECTTSCEEEEEEEEEEEECTTSCSEEEEEEEEEC-----
T ss_pred HHHHcCCCeEEEEEEEcCCCCEEEEeeEEEEEEcCCCCEEEEEEEeeecchhhh
Confidence 999999999999999999999999999999999999999999999999999965
|
| >3ue6_A Aureochrome1; PAS/LOV domain, FMN-binding blue-light photoreceptor, signal protein; HET: FMN; 2.75A {Vaucheria frigida} PDB: 3ulf_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=2.2e-16 Score=155.94 Aligned_cols=128 Identities=47% Similarity=0.804 Sum_probs=111.6
Q ss_pred hHHHHHHHhhc-CcHHHHHHhccCcEEEEcC---CCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHH
Q 002051 461 DKVRQKEMRKG-IDLATTLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKI 536 (975)
Q Consensus 461 r~~~~~~l~~~-~~l~~i~e~~~d~i~i~D~---~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~ 536 (975)
++..+++++.. ..|+.++++++++|+++|. +|+ |+++|++|++++||+.++++|+++..+.+++........+
T Consensus 23 ~~~~~~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~g~---i~~~N~~~~~l~G~~~~e~~g~~~~~l~~~~~~~~~~~~~ 99 (166)
T 3ue6_A 23 PSKANRILEDPDYSLVKALQMAQQNFVITDASLPDNP---IVYASRGFLTLTGYSLDQILGRNCRFLQGPETDPRAVDKI 99 (166)
T ss_dssp --------CCCCCHHHHHHHHTTSCEEEEETTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCceEEEEEccCCCCc---EEEECHHHHHHhCcCHHHHcCCCHhheeCCCCCHHHHHHH
Confidence 34445555544 5689999999999999998 566 9999999999999999999999988888888888888888
Q ss_pred HHHHHcCCcEEEEEEEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccc
Q 002051 537 RAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (975)
Q Consensus 537 ~~~l~~g~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~ 591 (975)
...+..+..+..++...++||..+|+.+++.|++|.+|.+.+++++++|||++|+
T Consensus 100 ~~~~~~~~~~~~e~~~~~~~g~~~~~~~~~~~i~~~~g~~~~~~~~~~DITe~k~ 154 (166)
T 3ue6_A 100 RNAITKGVDTSVCLLNYRQDGTTFWNLFFVAGLRDSKGNIVNYVGVQSKVSEDYA 154 (166)
T ss_dssp HHHHHHTCCEEEEEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEECCBCCHHHH
T ss_pred HHHHhcCCceEEEEEEEcCCCCEEEEEEEEEeeeCCCCCEEEEEEEEEechHHHH
Confidence 9999999999999999999999999999999999999999999999999999987
|
| >3mr0_A Sensory box histidine kinase/response regulator; PAS fold, structural genomics, PSI-2; HET: PG5; 1.49A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=99.67 E-value=4.6e-16 Score=150.78 Aligned_cols=131 Identities=15% Similarity=0.195 Sum_probs=113.8
Q ss_pred ccCcchHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCC--CCCCCCCCCCCHHHHHHHHHHHHc
Q 002051 182 KGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGR--NCRFLQGAGTDPEDVAKIRETLQN 259 (975)
Q Consensus 182 ~~L~~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~--~~~~l~~~~~~~~~~~~l~~~l~~ 259 (975)
++|+++++.|+.+++.+++++|.+|. ++.++++|+++++++||+.+++.+. .+..+++|++.......+..++..
T Consensus 2 ~aL~~se~rl~~~~~~~~~g~w~~d~---~~~~~~~s~~~~~~~G~~~~~~~~~~~~~~~~ihpdD~~~~~~~~~~~~~~ 78 (142)
T 3mr0_A 2 NALSASEERFQLAVSGASAGLWDWNP---KTGAMYLSPHFKKIMGYEDHELPDEITGHRESIHPDDRARVLAALKAHLEH 78 (142)
T ss_dssp -------CCHHHHHHHTTCEEEEECT---TTCCEEECHHHHHHTTCCGGGSCSEEC---CCBCTTTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCcEEEEEEc---CCCeEEECHHHHHHhCCCccccCCCHHHHHhhcCHHHHHHHHHHHHHHHhC
Confidence 46788888999999999999999999 8889999999999999999998873 355778888888888889999999
Q ss_pred CCcEEEEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHhhhc
Q 002051 260 GQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (975)
Q Consensus 260 g~~~~~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~~ 315 (975)
+..+..+++.+++||..+|+.....|++|++|.+.+++|+++|||++|++|++|+.
T Consensus 79 ~~~~~~e~r~~~~~G~~~w~~~~~~~~~d~~g~~~~~~G~~~DITerk~~E~~L~~ 134 (142)
T 3mr0_A 79 RDTYDVEYRVRTRSGDFRWIQSRGQALWNSAGEPYRMVGWIMDVTDRKRDEDALRV 134 (142)
T ss_dssp CCCEEEEEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHHHHHHHHH
T ss_pred CCceEEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEcCchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999874
|
| >3f1p_B ARYL hydrocarbon receptor nuclear translocator; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.0 PDB: 3f1o_B* 3f1n_B 3h7w_B* 3h82_B* 1x0o_A 2hv1_A 4h6j_B 2b02_A* 2k7s_A 2a24_B | Back alignment and structure |
|---|
Probab=99.66 E-value=1.3e-16 Score=149.45 Aligned_cols=116 Identities=9% Similarity=0.109 Sum_probs=100.6
Q ss_pred HHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHH-cCCcEEEEEE
Q 002051 190 IVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQ-NGQSYCGRLL 268 (975)
Q Consensus 190 ~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~-~g~~~~~e~~ 268 (975)
++..+++++++.|+++|. +|+|+|+|+++++++||+++|++|+++..+++|++.......+...+. .+..+..+++
T Consensus 3 ~~~ll~e~~~d~i~~~d~---~g~i~~~n~~~~~~~G~~~~el~g~~~~~~i~p~d~~~~~~~~~~~~~~~~~~~~~e~r 79 (121)
T 3f1p_B 3 FKGLNVCQPTRFISRHNI---EGIFTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVMFR 79 (121)
T ss_dssp -----CCCCCEEEEEECT---TSBEEEECTTHHHHHSCCGGGTTTSBGGGGBCTTTHHHHHHHHHHHTTSTTCCEEEEEE
T ss_pred cccceecCCCceEEEECC---CceEEEECcchhhhhCCChHHHcCCCHHHeECHHHHHHHHHHHHHHHhcCCCcccEEEE
Confidence 345688999999999999 999999999999999999999999999888999888887788878774 4557888999
Q ss_pred EEecCCCEEEEEEEeeeeecC-CCCEEEEEEEEeccchhhH
Q 002051 269 NYKKDGTPFWNLLTIAPIKDD-EGKVLKFIGMQVEVSKHTE 308 (975)
Q Consensus 269 ~~~kdG~~~w~~~~i~pi~d~-~G~v~~~v~~~rDITerk~ 308 (975)
.+++||+.+|++++..|++|. +|.+.+++++.+|||++|+
T Consensus 80 ~~~~dG~~~w~~~~~~~~~~~~~g~~~~iv~~~~DIT~~kq 120 (121)
T 3f1p_B 80 FRSKNQEWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQ 120 (121)
T ss_dssp EECTTSCEEEEEEEEEEECCTTCCCCCEEEEEEEECCCC--
T ss_pred EEecCCCEEEEEEEEEEEECCCCCceeEEEEEeEEcccccC
Confidence 999999999999999999987 7889999999999999886
|
| >3mr0_A Sensory box histidine kinase/response regulator; PAS fold, structural genomics, PSI-2; HET: PG5; 1.49A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=99.66 E-value=1e-15 Score=148.35 Aligned_cols=119 Identities=15% Similarity=0.221 Sum_probs=108.0
Q ss_pred CcHHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCC--CCCCcCCCCCCHHHHHHHHHHHHcCCcEEEE
Q 002051 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGR--NCRFLQGPETDPATVRKIRAAIDNQTDVTVQ 549 (975)
Q Consensus 472 ~~l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~--~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e 549 (975)
+.|+.+++++++++|.+|..+. ++++|+++++++||+++++.+. .+..++||++...+...+...+..+..+..+
T Consensus 9 ~rl~~~~~~~~~g~w~~d~~~~---~~~~s~~~~~~~G~~~~~~~~~~~~~~~~ihpdD~~~~~~~~~~~~~~~~~~~~e 85 (142)
T 3mr0_A 9 ERFQLAVSGASAGLWDWNPKTG---AMYLSPHFKKIMGYEDHELPDEITGHRESIHPDDRARVLAALKAHLEHRDTYDVE 85 (142)
T ss_dssp CCHHHHHHHTTCEEEEECTTTC---CEEECHHHHHHTTCCGGGSCSEEC---CCBCTTTHHHHHHHHHHHHHHCCCEEEE
T ss_pred HHHHHHHHhCCcEEEEEEcCCC---eEEECHHHHHHhCCCccccCCCHHHHHhhcCHHHHHHHHHHHHHHHhCCCceEEE
Confidence 5699999999999999999766 9999999999999999998873 3567889999998888999999989899999
Q ss_pred EEEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccccc
Q 002051 550 LINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (975)
Q Consensus 550 ~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~e 593 (975)
++++++||+.+|+..+..|++|.+|.+.+++|+++|||+||++|
T Consensus 86 ~r~~~~~G~~~w~~~~~~~~~d~~g~~~~~~G~~~DITerk~~E 129 (142)
T 3mr0_A 86 YRVRTRSGDFRWIQSRGQALWNSAGEPYRMVGWIMDVTDRKRDE 129 (142)
T ss_dssp EEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHHHH
T ss_pred EEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEcCchHHHHH
Confidence 99999999999999999999999999999999999999999844
|
| >3f1p_A Endothelial PAS domain-containing protein 1; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.7 PDB: 3f1o_A* 3f1n_A 3h7w_A* 3h82_A* 1p97_A 2a24_A 4h6j_A | Back alignment and structure |
|---|
Probab=99.65 E-value=2.1e-16 Score=147.02 Aligned_cols=109 Identities=17% Similarity=0.125 Sum_probs=101.2
Q ss_pred hccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEccCCcE
Q 002051 480 RIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKK 559 (975)
Q Consensus 480 ~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~~kdG~~ 559 (975)
++++.|+++|.+|+ |+|+|+++++++||+++|++|+++..++||++.....+.+...+..+..+..+++++++||+.
T Consensus 7 ~~~~~i~~~d~~g~---i~~~n~~~~~~~Gy~~~el~g~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~e~r~~~~dG~~ 83 (117)
T 3f1p_A 7 DSKTFLSEHSMDMK---FTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGY 83 (117)
T ss_dssp GGGEEEEEECTTCB---EEEECTHHHHHHCCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHHHHSEEECCCEEEECTTSSE
T ss_pred CCccEEEEECCCce---EEEECcChhhhhCCCHHHHcCCchhheECHHHHHHHHHHHHHHHhCCCeeeeEEEEEecCCCE
Confidence 35789999999776 999999999999999999999999999999998888888888888888888899999999999
Q ss_pred EEEEEEEeeeecC-CCCEEEEEEEeecCCcccc
Q 002051 560 FWNLFHLQPMRDQ-KGEVQYFIGVQLDGSEHLE 591 (975)
Q Consensus 560 ~wv~~~~~pi~d~-~G~i~~~v~i~rDITerk~ 591 (975)
+|++++..|++|. +|.+.+++++.+|||+||+
T Consensus 84 ~w~~~~~~~~~d~~~g~~~~iv~~~~DITer~~ 116 (117)
T 3f1p_A 84 VWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEK 116 (117)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEEEECSCCBC
T ss_pred EEEEEeeEEEECCCCCCceEEEEEeeecccccc
Confidence 9999999999997 8899999999999999986
|
| >3t50_A Blue-light-activated histidine kinase; PAS superfamily, blue-light photoreceptor, FMN binding, TRAN; HET: FMN; 1.64A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.65 E-value=7.1e-16 Score=145.08 Aligned_cols=122 Identities=35% Similarity=0.679 Sum_probs=106.4
Q ss_pred HHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecC
Q 002051 194 ALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKD 273 (975)
Q Consensus 194 ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kd 273 (975)
++++++++|+++|...++|+|+++|++|++++||+.++++|+++..+.++.........+...+..+..+..++...+++
T Consensus 2 ~~~~~~~~i~~~d~~~~~g~i~~~N~~~~~l~g~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (128)
T 3t50_A 2 ASEFTLMPMLITNPHLPDNPIVFANPAFLKLTGYEADEVMGRNCRFLQGHGTDPAHVRAIKSAIAAEKPIDIDIINYKKS 81 (128)
T ss_dssp CCCCCSSCEEEECTTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEECTT
T ss_pred ccccCcccEEEecCCCCCCcEEEEcHHHHHHhCcCHHHHcCCCHhhhcCCccCHHHHHHHHHHHHcCCCceeEEEEEcCC
Confidence 46788999999997443678999999999999999999999999888888888888888999999999999999999999
Q ss_pred CCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHhhhc
Q 002051 274 GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (975)
Q Consensus 274 G~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~~ 315 (975)
|..+|+.+++.|+.+.+|.+.+++++++|||++|++|++...
T Consensus 82 g~~~~~~~~~~~i~~~~g~~~~~~~~~~DITe~k~~e~~~~~ 123 (128)
T 3t50_A 82 GEAFWNRLHISPVHNANGRLQHFVSSQLDVTLELVPRGSLEH 123 (128)
T ss_dssp CCEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHC-------
T ss_pred CCEEEEEEEEEEEECCCCCEEEEEEEEEEcchhhhhhhhhhh
Confidence 999999999999999999999999999999999999988653
|
| >3t50_A Blue-light-activated histidine kinase; PAS superfamily, blue-light photoreceptor, FMN binding, TRAN; HET: FMN; 1.64A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.65 E-value=6.7e-16 Score=145.26 Aligned_cols=116 Identities=44% Similarity=0.804 Sum_probs=105.2
Q ss_pred HHHhccCcEEEEcC---CCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002051 477 TLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (975)
Q Consensus 477 i~e~~~d~i~i~D~---~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~ 553 (975)
++++++++|+++|. +|+ |+++|++|++++||+.++++|+++..+.+++........+...+..+..+..++...
T Consensus 2 ~~~~~~~~i~~~d~~~~~g~---i~~~N~~~~~l~g~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 78 (128)
T 3t50_A 2 ASEFTLMPMLITNPHLPDNP---IVFANPAFLKLTGYEADEVMGRNCRFLQGHGTDPAHVRAIKSAIAAEKPIDIDIINY 78 (128)
T ss_dssp CCCCCSSCEEEECTTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred ccccCcccEEEecCCCCCCc---EEEEcHHHHHHhCcCHHHHcCCCHhhhcCCccCHHHHHHHHHHHHcCCCceeEEEEE
Confidence 46789999999998 556 999999999999999999999998888888888888888999999999999999999
Q ss_pred ccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccccccC
Q 002051 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRN 595 (975)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~e~~ 595 (975)
+++|..+|+.+++.|+++.+|.+.+++++++|||++|+++++
T Consensus 79 ~~~g~~~~~~~~~~~i~~~~g~~~~~~~~~~DITe~k~~e~~ 120 (128)
T 3t50_A 79 KKSGEAFWNRLHISPVHNANGRLQHFVSSQLDVTLELVPRGS 120 (128)
T ss_dssp CTTCCEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHC----
T ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEcchhhhhhhh
Confidence 999999999999999999999999999999999999996543
|
| >4eet_B Phototropin-2; LOV, blue light photoreceptor, signaling protein, flavoprote; HET: FMN; 1.20A {Arabidopsis thaliana} PDB: 4ees_A* 4eer_A* 4eep_A* 4eeu_A* 1jnu_A* 1g28_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=2.8e-15 Score=137.14 Aligned_cols=111 Identities=82% Similarity=1.236 Sum_probs=102.3
Q ss_pred HHHhccCcEEEEcC---CCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002051 477 TLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (975)
Q Consensus 477 i~e~~~d~i~i~D~---~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~ 553 (975)
++++++++|+++|. +|+ |+++|++|++++||+.++++|+++..+.+++........+...+..+..+..+++..
T Consensus 2 ~l~~~~~~i~~~d~~~~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (115)
T 4eet_B 2 SPEFIEKNFVITDPRLPDNP---IIFASDGFLELTEYSREEILGRNARFLQGPETDQATVQKIRDAIRDQRETTVQLINY 78 (115)
T ss_dssp ---CCCCSEEEECTTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred ccccCCCcEEEEcCCCCCCc---EEEEcHHHHHHHCcCHHHHhCCCHHHhcCCCCChHHHHHHHHHHHcCCCcceEEEEe
Confidence 47889999999999 777 999999999999999999999998888888888888888899999999999999999
Q ss_pred ccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCccc
Q 002051 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHL 590 (975)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk 590 (975)
+++|+.+|+.+++.|+++.+|.+.+++++++|||+|+
T Consensus 79 ~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DITer~ 115 (115)
T 4eet_B 79 TKSGKKFWNLLHLQPVRDQKGELQYFIGVQLDGSDHV 115 (115)
T ss_dssp CTTCCEEEEEEEEEEEECTTSCEEEEEEEEEECSCCC
T ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEeecccC
Confidence 9999999999999999999999999999999999985
|
| >1d06_A Nitrogen fixation regulatory protein FIXL; oxygen sensor, histidine kinase, PAS, high-resolution, two-C system, signaling protein; HET: HEM; 1.40A {Sinorhizobium meliloti} SCOP: d.110.3.2 PDB: 1ew0_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=1.2e-15 Score=145.06 Aligned_cols=124 Identities=16% Similarity=0.202 Sum_probs=100.9
Q ss_pred hhhHHHHHHHhhc-CcHHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHH
Q 002051 459 VDDKVRQKEMRKG-IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIR 537 (975)
Q Consensus 459 ~er~~~~~~l~~~-~~l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~ 537 (975)
|++++.+++++.. ..|+.++++++++|+++|.+|+ |++||++|++++||+++|++|+++..++++++.......+.
T Consensus 2 ~~~~~~e~~l~~~~~~~~~l~~~~~d~i~~~d~~g~---i~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~~~~~~~~~~ 78 (130)
T 1d06_A 2 SHMLETEDVVRARDAHLRSILDTVPDATVVSATDGT---IVSFNAAAVRQFGYAEEEVIGQNLRILMPEPYRHEHDGYLQ 78 (130)
T ss_dssp CHHHHHHHHHHHHTSCHHHHHTTCSSEEEEEETTSB---EEEECHHHHHHHCCCHHHHTTSBGGGGSCTTHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhhCcCeEEEECCCCe---EEEEcHHHHHHHCCCHHHHcCCcHHHHCCchhHHHHHHHHH
Confidence 5677888888776 6699999999999999999766 99999999999999999999999888887765554444444
Q ss_pred HHHHcCCc----EEEEEEEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCC
Q 002051 538 AAIDNQTD----VTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (975)
Q Consensus 538 ~~l~~g~~----~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDIT 587 (975)
.....+.. ...++..+++||+.+|++++++|+.++ ...+++++++|||
T Consensus 79 ~~~~~~~~~~~~~~~e~~~~~kdG~~~~~~~~~~~~~~~--~~~~~~~~~~DIT 130 (130)
T 1d06_A 79 RYMATGEKRIIGIDRVVSGQRKDGSTFPMKLAVGEMRSG--GERFFTGFIRDLT 130 (130)
T ss_dssp HHHHHCCCSSTTSCEEEEEECTTSCEEEEEEEEEEEEET--TEEEEEEEEEECC
T ss_pred HHHhcCCccccCCeeEEEEEeCCCCEEEEEEEEEEEEEC--CeEEEEEEEEECc
Confidence 44444432 235778899999999999999999864 3456899999998
|
| >1d06_A Nitrogen fixation regulatory protein FIXL; oxygen sensor, histidine kinase, PAS, high-resolution, two-C system, signaling protein; HET: HEM; 1.40A {Sinorhizobium meliloti} SCOP: d.110.3.2 PDB: 1ew0_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=2.7e-16 Score=149.61 Aligned_cols=125 Identities=22% Similarity=0.264 Sum_probs=102.5
Q ss_pred cccccccccCcchHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHH
Q 002051 175 SDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIR 254 (975)
Q Consensus 175 ~~~~~~e~~L~~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~ 254 (975)
|+.+..+++|++++..|+.++++++++|+++|. +|+|+++|++|++++||+.+|++|+++..++++.....+...+.
T Consensus 2 ~~~~~~e~~l~~~~~~~~~l~~~~~d~i~~~d~---~g~i~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~~~~~~~~~~ 78 (130)
T 1d06_A 2 SHMLETEDVVRARDAHLRSILDTVPDATVVSAT---DGTIVSFNAAAVRQFGYAEEEVIGQNLRILMPEPYRHEHDGYLQ 78 (130)
T ss_dssp CHHHHHHHHHHHHTSCHHHHHTTCSSEEEEEET---TSBEEEECHHHHHHHCCCHHHHTTSBGGGGSCTTHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhhCcCeEEEECC---CCeEEEEcHHHHHHHCCCHHHHcCCcHHHHCCchhHHHHHHHHH
Confidence 455678888888889999999999999999999 99999999999999999999999999888887765554444455
Q ss_pred HHHHcCCc----EEEEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccc
Q 002051 255 ETLQNGQS----YCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (975)
Q Consensus 255 ~~l~~g~~----~~~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDIT 304 (975)
.....+.. ...++..++|||+.+|+++++.|+.+. ...+++++++|||
T Consensus 79 ~~~~~~~~~~~~~~~e~~~~~kdG~~~~~~~~~~~~~~~--~~~~~~~~~~DIT 130 (130)
T 1d06_A 79 RYMATGEKRIIGIDRVVSGQRKDGSTFPMKLAVGEMRSG--GERFFTGFIRDLT 130 (130)
T ss_dssp HHHHHCCCSSTTSCEEEEEECTTSCEEEEEEEEEEEEET--TEEEEEEEEEECC
T ss_pred HHHhcCCccccCCeeEEEEEeCCCCEEEEEEEEEEEEEC--CeEEEEEEEEECc
Confidence 54444432 234667789999999999999999763 3456899999998
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=1.4e-16 Score=171.68 Aligned_cols=116 Identities=19% Similarity=0.145 Sum_probs=91.0
Q ss_pred cccccccccCCceEEEEEEEeCCCeE--EEEEEeccchhc------------------------------------ccc-
Q 002051 671 FRPIKPLGSGDTGSVHLVELCGSGQY--FAMKAMDKGVML------------------------------------NRN- 711 (975)
Q Consensus 671 y~i~~~LG~G~fG~Vy~a~~~~t~~~--vAiK~l~~~~~~------------------------------------~~~- 711 (975)
|.+.+.||+|+||.||+|.+..+|+. ||||+++..... ...
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999888999 999986432100 000
Q ss_pred ----c-----cCCeEEEEEeccCC-C----CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeecCCCCCCEE
Q 002051 712 ----K-----TKTHVCLITDYCPG-G----ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH-CQGIIYRDLKPENVL 776 (975)
Q Consensus 712 ----~-----~~~~~~lV~Ey~~g-g----sL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH-~~gIiHrDIKp~NIL 776 (975)
. .....|||||||.+ | +|.++... .++..+..++.||+.||.||| ++||+||||||+|||
T Consensus 129 ~~~i~~p~~~~~~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NIL 203 (258)
T 1zth_A 129 EAGVSVPQPYTYMKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIM 203 (258)
T ss_dssp HTTCCCCCEEEEETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEE
T ss_pred hCCCCCCeEEEcCCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEE
Confidence 0 11234799999932 3 77776533 234567889999999999999 999999999999999
Q ss_pred EecCCcEEEeeccCCCc
Q 002051 777 LQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 777 l~~~g~vkL~DFG~a~~ 793 (975)
++. .++|+|||+|..
T Consensus 204 l~~--~~~liDFG~a~~ 218 (258)
T 1zth_A 204 YID--KVYFIDMGQAVT 218 (258)
T ss_dssp ESS--SEEECCCTTCEE
T ss_pred EcC--cEEEEECccccc
Confidence 998 899999999854
|
| >3mqq_A Transcriptional regulator, LUXR family; PAS domain, PSI, MCSG, structural genomics, center for structural genomics; 1.65A {Burkholderia thailandensis} PDB: 3mqo_A | Back alignment and structure |
|---|
Probab=99.63 E-value=5.8e-16 Score=144.83 Aligned_cols=115 Identities=16% Similarity=0.177 Sum_probs=94.7
Q ss_pred CcHHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCC-HHHHHHHHHHHHcCCcEEEEE
Q 002051 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETD-PATVRKIRAAIDNQTDVTVQL 550 (975)
Q Consensus 472 ~~l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~-~~~~~~~~~~l~~g~~~~~e~ 550 (975)
..|+.+|++++++|++ |.+|+ |++||++|++++||+++|++|+++..+++++.. ......+...+..+..+..++
T Consensus 3 ~~~~~~~~~~~~~i~~-~~~g~---i~~~N~a~~~l~G~~~~el~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 78 (120)
T 3mqq_A 3 IDYKTAFHLAPIGLVL-SRDRV---IEDCNDELAAIFRCARADLIGRSFEVLYPSSDEFERIGERISPVMIAHGSYADDR 78 (120)
T ss_dssp CCHHHHHHHCSSEEEE-EETTE---EEEECHHHHHHTTSCHHHHTTCBGGGGSSSHHHHHHHHHHHHHHHHHHSCEEEEE
T ss_pred chHHHHHhcCCceEEE-ecCCE---EHHHHHHHHHHhCcCHHHhCCCchhhccCChhhHHHHHHHHHHHHhcCCcceEEE
Confidence 3589999999999965 66555 999999999999999999999998877765433 344556667777788899999
Q ss_pred EEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccc
Q 002051 551 INYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (975)
Q Consensus 551 ~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~ 591 (975)
+++++||+.+|+.++..|+ +.+|...+++++++|||+||+
T Consensus 79 ~~~~~dG~~~~~~~~~~~~-~~~~~~~~~v~~~~DITerk~ 118 (120)
T 3mqq_A 79 IMKRAGGELFWCHVTGRAL-DRTAPLAAGVWTFEDLSATRR 118 (120)
T ss_dssp EEECTTSCEEEEEEEEEES-STTSTTSSEEEEEEESCC---
T ss_pred EEEeCCCCEEEEEEEEEEC-CCCCCceeEEEEEEcccHhhc
Confidence 9999999999999999999 556667789999999999987
|
| >3f1p_A Endothelial PAS domain-containing protein 1; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.7 PDB: 3f1o_A* 3f1n_A 3h7w_A* 3h82_A* 1p97_A 2a24_A 4h6j_A | Back alignment and structure |
|---|
Probab=99.62 E-value=5.1e-16 Score=144.40 Aligned_cols=108 Identities=15% Similarity=0.156 Sum_probs=100.0
Q ss_pred ccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCCEE
Q 002051 198 FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPF 277 (975)
Q Consensus 198 ~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~ 277 (975)
+++.|+++|. +|+|+|+|+++++++||+++|++|+++..+++|++.......+...+..+..+..+++.+++||+.+
T Consensus 8 ~~~~i~~~d~---~g~i~~~n~~~~~~~Gy~~~el~g~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~e~r~~~~dG~~~ 84 (117)
T 3f1p_A 8 SKTFLSEHSM---DMKFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYV 84 (117)
T ss_dssp GGEEEEEECT---TCBEEEECTHHHHHHCCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHHHHSEEECCCEEEECTTSSEE
T ss_pred CccEEEEECC---CceEEEECcChhhhhCCCHHHHcCCchhheECHHHHHHHHHHHHHHHhCCCeeeeEEEEEecCCCEE
Confidence 4678999999 9999999999999999999999999998899998888888888888888888888999999999999
Q ss_pred EEEEEeeeeecC-CCCEEEEEEEEeccchhhH
Q 002051 278 WNLLTIAPIKDD-EGKVLKFIGMQVEVSKHTE 308 (975)
Q Consensus 278 w~~~~i~pi~d~-~G~v~~~v~~~rDITerk~ 308 (975)
|++++..|++|+ +|.+.+++++.+|||++|+
T Consensus 85 w~~~~~~~~~d~~~g~~~~iv~~~~DITer~~ 116 (117)
T 3f1p_A 85 WLETQGTVIYNPRNLQPQCIMCVNYVLSEIEK 116 (117)
T ss_dssp EEEEEEEEEEETTTTEEEEEEEEEEECSCCBC
T ss_pred EEEEeeEEEECCCCCCceEEEEEeeecccccc
Confidence 999999999998 8889999999999999885
|
| >4eet_B Phototropin-2; LOV, blue light photoreceptor, signaling protein, flavoprote; HET: FMN; 1.20A {Arabidopsis thaliana} PDB: 4ees_A* 4eer_A* 4eep_A* 4eeu_A* 1jnu_A* 1g28_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=5.4e-15 Score=135.25 Aligned_cols=114 Identities=41% Similarity=0.829 Sum_probs=103.1
Q ss_pred HHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecC
Q 002051 194 ALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKD 273 (975)
Q Consensus 194 ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kd 273 (975)
.+++++++|+++|...++|+|+++|++|++++||+.++++|+++..+.++.........+...+..+..+..++..++++
T Consensus 2 ~l~~~~~~i~~~d~~~~~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (115)
T 4eet_B 2 SPEFIEKNFVITDPRLPDNPIIFASDGFLELTEYSREEILGRNARFLQGPETDQATVQKIRDAIRDQRETTVQLINYTKS 81 (115)
T ss_dssp ---CCCCSEEEECTTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEECTT
T ss_pred ccccCCCcEEEEcCCCCCCcEEEEcHHHHHHHCcCHHHHhCCCHHHhcCCCCChHHHHHHHHHHHcCCCcceEEEEecCC
Confidence 47889999999997555788999999999999999999999998888888888888888999999999999999999999
Q ss_pred CCEEEEEEEeeeeecCCCCEEEEEEEEeccchhh
Q 002051 274 GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHT 307 (975)
Q Consensus 274 G~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk 307 (975)
|+.+|+.+++.|+.+.+|.+.+++++++|||+++
T Consensus 82 g~~~~~~~~~~~~~~~~g~~~~~~~~~~DITer~ 115 (115)
T 4eet_B 82 GKKFWNLLHLQPVRDQKGELQYFIGVQLDGSDHV 115 (115)
T ss_dssp CCEEEEEEEEEEEECTTSCEEEEEEEEEECSCCC
T ss_pred CCEEEEEEEEEEEECCCCCEEEEEEEEEeecccC
Confidence 9999999999999999999999999999999874
|
| >2r78_A Sensor protein; sensory box sensor histidine kinase/response regulator, structural genomics, PSI, MCSG; 1.60A {Geobacter sulfurreducens pca} | Back alignment and structure |
|---|
Probab=99.62 E-value=3.9e-15 Score=139.13 Aligned_cols=114 Identities=16% Similarity=0.196 Sum_probs=93.9
Q ss_pred ccCcchHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCC
Q 002051 182 KGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ 261 (975)
Q Consensus 182 ~~L~~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~ 261 (975)
+.|+++++.|+.++++++++|+++|. +|+|+++|++|++++||+.+|++|+++..+.++.... ........+..+.
T Consensus 4 ~~l~~se~~~~~l~e~~~d~i~~~d~---~g~i~~vN~a~~~l~Gy~~~el~g~~~~~~~~~~~~~-~~~~~~~~~~~~~ 79 (117)
T 2r78_A 4 ENLYFQSNAYRALFEHAIDGIFIMDA---EGHYLDVNPAICSAIGYTRDEFLALDWGVLSRGVDSG-WAAASLARIVGGE 79 (117)
T ss_dssp CSHHHHHHHHHHHHHHCSSEEEEECT---TSBEEEECHHHHHHHCCCHHHHTTCBTTTTTTCSTTS-HHHHHHHHHHTTC
T ss_pred hHHHHhHHHHHHHHhcCCceEEEECC---CCCEEEecHHHHHHHCcCHHHHcCCCHHHhCCccchh-HHHHHHHHHHcCC
Confidence 45677889999999999999999999 9999999999999999999999999977665443322 2334456667777
Q ss_pred cEEEEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccc
Q 002051 262 SYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (975)
Q Consensus 262 ~~~~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDIT 304 (975)
.+..+.+.++|||+.+|+++++.|+. +|. ++++++|||
T Consensus 80 ~~~~e~~~~~kdG~~~~v~~~~~~~~--~g~---~~~i~~DIT 117 (117)
T 2r78_A 80 PLREERTVWTRNGDQLTVELSAHLLP--DGK---ILGIARDVS 117 (117)
T ss_dssp CEEEEEEEECTTSCEEEEEEEEEECT--TSC---EEEEEEC--
T ss_pred cEEEEEEEEecCCCEEEEEEEEEEec--CCe---EEEEEEeCC
Confidence 78889999999999999999999985 566 678899998
|
| >3sw1_A Sensory box protein; light-oxygen-voltage, LOV, PAS, signaling protein; HET: FMN; 2.63A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.61 E-value=4e-15 Score=146.29 Aligned_cols=129 Identities=32% Similarity=0.575 Sum_probs=118.9
Q ss_pred chHHHHHHHHHhccCcEEEEeCCCCCC---ceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCc
Q 002051 186 RVSDIVKDALSTFQQTFVVSDATKPDY---PIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS 262 (975)
Q Consensus 186 ~~~~~l~~ild~~~d~i~i~D~~~~~G---~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~ 262 (975)
...++++.+++.++++|+++|. +| +|+++|++|++++||+.++++|+++..++++.........+...+..+..
T Consensus 22 ~~~~~~~~i~~~~~~~i~~~d~---~~~~~~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (162)
T 3sw1_A 22 INAQLLQSMVDASNDGIVVAEK---EGDDTILIYVNAAFEYLTGYSRDEILYQDCRFLQGDDRDQLGRARIRKAMAEGRP 98 (162)
T ss_dssp CCHHHHHHHHHTCSSEEEEEEE---ETTEEEEEEECHHHHHHHTCCHHHHTTSBGGGGTTTCCCCHHHHHHHHHHHHTCC
T ss_pred chHHHHHHHHhhccCcEEEEeC---CCCccEEEEECHHHHHHHCCCHHHHcCCCcceecCCCcCHHHHHHHHHHHhcCCC
Confidence 3457899999999999999999 89 99999999999999999999999998888888878888888899999999
Q ss_pred EEEEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHhhhcCC
Q 002051 263 YCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRP 317 (975)
Q Consensus 263 ~~~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~~~~ 317 (975)
+..++...+++|..+|+.+++.|+.+.+|.+.+++++++|||++++++++++...
T Consensus 99 ~~~~~~~~~~~g~~~~~~~~~~~i~~~~g~~~~~~~~~~DiTe~k~~e~~l~~~~ 153 (162)
T 3sw1_A 99 CREVLRNYRKDGSAFWNELSITPVKSDFDQRTYFIGIQKDVSRQVELERELAELR 153 (162)
T ss_dssp EEEEEEEECTTCCEEEEEEEEEEEECSSSSCEEEEEEEEECHHHHHHHHHHHHHT
T ss_pred CcceEEEECCCCCEEEEEEEEEEeecCCCCEEEEEEEEEeCcHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999987543
|
| >2vv6_A FIXL, sensor protein FIXL; signaling protein, transferase, phosphoprotein, nitrogen FIX PER-ARNT-SIM, metal-binding, PAS, iron, heme; HET: HEM; 1.5A {Bradyrhizobium japonicum} PDB: 1xj6_A* 1xj4_A* 2vv7_A* 2vv8_A* 1lsw_A* 1dp8_A* 1dp9_A* 1drm_A* 1lsv_A* 1dp6_A* 1lsx_A* 1lt0_A* 1y28_A* 2cmn_A* 1xj3_A* 1xj2_A* 2owh_A* 2owj_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1.5e-15 Score=141.82 Aligned_cols=113 Identities=18% Similarity=0.232 Sum_probs=82.1
Q ss_pred hccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCc----EEEEEEEEec
Q 002051 197 TFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS----YCGRLLNYKK 272 (975)
Q Consensus 197 ~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~----~~~e~~~~~k 272 (975)
+++++|+++|. +|+|+++|++|++++||+++|++|+++..++++.....+...+......+.. ...++..++|
T Consensus 1 ~~~d~i~~~d~---~g~i~~~N~a~~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (119)
T 2vv6_A 1 TIPDAMIVIDG---HGIIQLFSTAAERLFGWSELEAIGQNVNILMPEPDRSRHDSYISRYRTTSDPHIIGIGRIVTGKRR 77 (119)
T ss_dssp -CCCEEEEEET---TSBEEEECHHHHHHHCCCHHHHTTSBGGGGSCTTHHHHHHHHHHHHHHHCCCSSTTTCEEEEEECT
T ss_pred CCcceEEEECC---CCeEEEEhHHHHHHhCCCHHHHcCCCHHHhCCchHHHHHHHHHHHHhcCCCcccCCCceEEEEEeC
Confidence 36899999999 9999999999999999999999999988887766554444444444444432 2345677899
Q ss_pred CCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHhhh
Q 002051 273 DGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (975)
Q Consensus 273 dG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~ 314 (975)
||+.+|++++++|+.+. ...+++++++|||++|++|++|+
T Consensus 78 dG~~~~~~~~~~~~~~~--~~~~~~~~~~DITerk~~e~~l~ 117 (119)
T 2vv6_A 78 DGTTFPMHLSIGEMQSG--GEPYFTGFVRDLTEHQQTQARLQ 117 (119)
T ss_dssp TSCEEEEEEEEEEEEET--TEEEEEEEEEECC----------
T ss_pred CCCEEEEEEEEEEEEEC--CeEEEEEEEEEcHHHHHHHHHHH
Confidence 99999999999999764 34568999999999999998875
|
| >3mqq_A Transcriptional regulator, LUXR family; PAS domain, PSI, MCSG, structural genomics, center for structural genomics; 1.65A {Burkholderia thailandensis} PDB: 3mqo_A | Back alignment and structure |
|---|
Probab=99.61 E-value=8.5e-16 Score=143.69 Aligned_cols=115 Identities=15% Similarity=0.141 Sum_probs=94.9
Q ss_pred HHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCC-HHHHHHHHHHHHcCCcEEEEEE
Q 002051 190 IVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTD-PEDVAKIRETLQNGQSYCGRLL 268 (975)
Q Consensus 190 ~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~-~~~~~~l~~~l~~g~~~~~e~~ 268 (975)
.|+.++++++++|+ +|. +|+|+++|++|++|+||+++|++|+++..+++++.. ......+...+..+..+..++.
T Consensus 4 ~~~~~~~~~~~~i~-~~~---~g~i~~~N~a~~~l~G~~~~el~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 79 (120)
T 3mqq_A 4 DYKTAFHLAPIGLV-LSR---DRVIEDCNDELAAIFRCARADLIGRSFEVLYPSSDEFERIGERISPVMIAHGSYADDRI 79 (120)
T ss_dssp CHHHHHHHCSSEEE-EEE---TTEEEEECHHHHHHTTSCHHHHTTCBGGGGSSSHHHHHHHHHHHHHHHHHHSCEEEEEE
T ss_pred hHHHHHhcCCceEE-Eec---CCEEHHHHHHHHHHhCcCHHHhCCCchhhccCChhhHHHHHHHHHHHHhcCCcceEEEE
Confidence 37889999999996 577 999999999999999999999999998877765433 3445566677777888999999
Q ss_pred EEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHH
Q 002051 269 NYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEG 309 (975)
Q Consensus 269 ~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~ 309 (975)
.+++||+.+|+.++..|+ +.+|...+++++++|||++|++
T Consensus 80 ~~~~dG~~~~~~~~~~~~-~~~~~~~~~v~~~~DITerk~~ 119 (120)
T 3mqq_A 80 MKRAGGELFWCHVTGRAL-DRTAPLAAGVWTFEDLSATRRV 119 (120)
T ss_dssp EECTTSCEEEEEEEEEES-STTSTTSSEEEEEEESCC----
T ss_pred EEeCCCCEEEEEEEEEEC-CCCCCceeEEEEEEcccHhhcc
Confidence 999999999999999998 5666667889999999999976
|
| >2v0u_A NPH1-1, LOV2; kinase, transferase, ATP-binding, serine/threonine-protein kinase, light-induced signal trans phototropin1, nucleotide-binding; HET: FMN; 1.40A {Avena sativa} PDB: 2v0w_A* 2v1b_A* 2v1a_A* 1jnu_A* 1g28_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1e-14 Score=138.44 Aligned_cols=140 Identities=84% Similarity=1.227 Sum_probs=119.3
Q ss_pred cHHHHHHhccCcEEEEcC---CCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEE
Q 002051 473 DLATTLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQ 549 (975)
Q Consensus 473 ~l~~i~e~~~d~i~i~D~---~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e 549 (975)
+|+.++++++++++++|. +|. |+++|+++++++||+.++++|+++..+.+++........+...+..+..+..+
T Consensus 3 ~l~~~~~~~~~~i~~~d~~~~~~~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (146)
T 2v0u_A 3 FLATTLERIEKNFVITDPRLPDNP---IIFASDSFLQLTEYSREEILGRNCRFLQGPETDRATVRKIRDAIDNQTEVTVQ 79 (146)
T ss_dssp SCCCTGGGSSSCEEEECTTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEE
T ss_pred hHHHHHhcCCCcEEEEcCCCCCce---EEEEcHHHHHHHCcCHHHHcCCCHHHhcCCcCChHHHHHHHHHHhcCCCcceE
Confidence 366789999999999998 777 99999999999999999999999888888888888888888899999999999
Q ss_pred EEEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccccccCCCcchhhHHHHHHHHHHhhhhhhhhhc
Q 002051 550 LINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEAVKE 622 (975)
Q Consensus 550 ~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~e~~~~~~~~~~e~~~~v~~~~~~i~~~v~~ 622 (975)
+...+++|..+|+.++..|+++.+|.+.+++++++|||++|+ .+.+.+..+..+.+...+..++++
T Consensus 80 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 145 (146)
T 2v0u_A 80 LINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVR-------DAAEREGVMLIKKTAENIDEAAKE 145 (146)
T ss_dssp EEEECTTCCEEEEEEEEEEEECTTSCEEEEEEEEEEESSCCC-------HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEecCCcEEEEEEEEEEeECCCCCEEEEEEEEeechHHHH-------HHHHHHHHHHHHHHHhccHhhHhc
Confidence 999999999999999999999999999999999999999986 223334444555555555555543
|
| >3nja_A Probable ggdef family protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.37A {Chromobacterium violaceum} | Back alignment and structure |
|---|
Probab=99.60 E-value=2.3e-15 Score=140.00 Aligned_cols=122 Identities=11% Similarity=0.014 Sum_probs=95.6
Q ss_pred CcchHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcC--CCCCCCCCCCCCHHHHHHHHHHHHcCC
Q 002051 184 LPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVG--RNCRFLQGAGTDPEDVAKIRETLQNGQ 261 (975)
Q Consensus 184 L~~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG--~~~~~l~~~~~~~~~~~~l~~~l~~g~ 261 (975)
|+++++.|+.+++.++++++++|. +|.++++|+++++++||+.++++| ..+..++++++.......+...+..+.
T Consensus 2 l~~~~~~l~~~~~~~~~~i~~~d~---~~~~~~~n~~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 78 (125)
T 3nja_A 2 NAMAEKLLHTAESDAGIGSWVLHM---ESGRLEWSQAVHDIFGTDSATFDATEDAYFQRVHPDDRARVRRELDRHVLGDR 78 (125)
T ss_dssp ---------------CCEEEEEET---TTTEEEECHHHHHHHTCCTTTCCCBHHHHHHHBCTTTHHHHHHHHHHHHHSCC
T ss_pred cHHHHHHHHHHHHhCCeeEEEEEc---CCCcEEECHHHHHHhCCCcccccccHHHHHhhcChhHHHHHHHHHHHHHhcCC
Confidence 566778899999999999999999 999999999999999999999999 444456777777778888888889998
Q ss_pred cEEEEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhH
Q 002051 262 SYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTE 308 (975)
Q Consensus 262 ~~~~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~ 308 (975)
.+..+++..+++|..+|+.++..|+.+.+|.+.+++++++|||++|+
T Consensus 79 ~~~~e~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~g~~~DITe~k~ 125 (125)
T 3nja_A 79 PFDVEYRIVRPDGQVRELLERNHIQRQASGQVDHLWGTVIDMTEHKQ 125 (125)
T ss_dssp CEEEEEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCC---
T ss_pred CceEEEEEECCCCCEEEEEEeeEEEECCCCCEEEEEEEEEecccccC
Confidence 89999999999999999999999999999999999999999999874
|
| >2z6d_A Phototropin-2; PAS-fold, LOV-fold, alternative splicing, ATP-binding, chromophore, flavoprotein, FMN, kinase, membrane, nucleotide-binding; HET: FMN; 2.00A {Arabidopsis thaliana} PDB: 2z6c_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=1e-14 Score=135.01 Aligned_cols=127 Identities=75% Similarity=1.225 Sum_probs=108.1
Q ss_pred chHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEE
Q 002051 186 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG 265 (975)
Q Consensus 186 ~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~ 265 (975)
+..+.++.++++++++++++|..+.+|+|+++|++|++++||+.++++|+++..+.++.........+...+..+..+..
T Consensus 3 ~~~~~~~~~~~~~~~~i~~~d~~d~~~~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (130)
T 2z6d_A 3 RVSQELKTALSTLQQTFVVSDATQPHCPIVYASSGFFTMTGYSSKEIVGRNCRFLQGPDTDKNEVAKIRDCVKNGKSYCG 82 (130)
T ss_dssp ----CHHHHHHHTTCEEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEE
T ss_pred hHHHHHHHHHHhcccceeeeeccCCCCcEEEecHHHHHHhCcCHHHHcCCChhhccCCCCCchHHHHHHHHHHcCCccee
Confidence 34456889999999999999922229999999999999999999999999998888888788888888888999998888
Q ss_pred EEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHh
Q 002051 266 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKD 312 (975)
Q Consensus 266 e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~ 312 (975)
++...+++|..+|+.+++.|+.+.+|.+.+++++++|||+++++|++
T Consensus 83 ~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~~e~e 129 (130)
T 2z6d_A 83 RLLNYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQVEVSKYTEGVND 129 (130)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCTTC-----
T ss_pred EEEEEcCCCcEEEEEEEEEEEECCCCCeeEEEEEEecchHHHHhhcc
Confidence 88888999999999999999999999999999999999999988764
|
| >2r78_A Sensor protein; sensory box sensor histidine kinase/response regulator, structural genomics, PSI, MCSG; 1.60A {Geobacter sulfurreducens pca} | Back alignment and structure |
|---|
Probab=99.60 E-value=8.4e-15 Score=136.83 Aligned_cols=105 Identities=15% Similarity=0.165 Sum_probs=86.3
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~ 553 (975)
|+.++++++++|+++|.+|+ |++||++|++++||+++|++|+++..+.++.... ........+..+..+..+.+++
T Consensus 13 ~~~l~e~~~d~i~~~d~~g~---i~~vN~a~~~l~Gy~~~el~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~e~~~~ 88 (117)
T 2r78_A 13 YRALFEHAIDGIFIMDAEGH---YLDVNPAICSAIGYTRDEFLALDWGVLSRGVDSG-WAAASLARIVGGEPLREERTVW 88 (117)
T ss_dssp HHHHHHHCSSEEEEECTTSB---EEEECHHHHHHHCCCHHHHTTCBTTTTTTCSTTS-HHHHHHHHHHTTCCEEEEEEEE
T ss_pred HHHHHhcCCceEEEECCCCC---EEEecHHHHHHHCcCHHHHcCCCHHHhCCccchh-HHHHHHHHHHcCCcEEEEEEEE
Confidence 99999999999999999776 9999999999999999999999877665444322 2233455566777888999999
Q ss_pred ccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCC
Q 002051 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (975)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDIT 587 (975)
+|||+.+|++++++|+. +|. ++++++|||
T Consensus 89 ~kdG~~~~v~~~~~~~~--~g~---~~~i~~DIT 117 (117)
T 2r78_A 89 TRNGDQLTVELSAHLLP--DGK---ILGIARDVS 117 (117)
T ss_dssp CTTSCEEEEEEEEEECT--TSC---EEEEEEC--
T ss_pred ecCCCEEEEEEEEEEec--CCe---EEEEEEeCC
Confidence 99999999999999986 465 678899998
|
| >3k3c_A Protein RV1364C/MT1410; sensor, PAS, signal transduction, fatty-acid binding, sigma regulator, signaling protein; HET: PLM; 1.62A {Mycobacterium tuberculosis} PDB: 3k3d_A | Back alignment and structure |
|---|
Probab=99.60 E-value=1e-15 Score=150.39 Aligned_cols=125 Identities=10% Similarity=0.108 Sum_probs=107.0
Q ss_pred cchHHHHHHHHHhccCcEEEEe-CCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcE
Q 002051 185 PRVSDIVKDALSTFQQTFVVSD-ATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSY 263 (975)
Q Consensus 185 ~~~~~~l~~ild~~~d~i~i~D-~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~ 263 (975)
....+.|+.++++++++|+++| . +|+|+++|++|++++||+ +++|+++..++++.........+.+++..|...
T Consensus 13 ~~~~~~~~~~~~~~~~~i~~~d~~---~~~i~~~N~~~~~~~g~~--~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 87 (158)
T 3k3c_A 13 VGAAEDVRRIFEHIPAILVGLEGP---DHRFVAVNAAYRGFSPLL--DTVGQPAREVYPELEGQQIYEMLDRVYQTGEPQ 87 (158)
T ss_dssp TCCHHHHHHHHHHCSSEEEEEETT---TTEEEEECHHHHHHCTTC--CSTTSBHHHHSGGGGGTTHHHHHHHHHHHCCCE
T ss_pred HHHHHHHHHHHhcCCceEEEEECC---CcEeHHHHHHHHHHcCCc--hhcCCcHHHhCCchhHHHHHHHHHHHHHhCCcc
Confidence 4455789999999999999999 8 999999999999999999 999999888888766666777888888888875
Q ss_pred EEEEEE---Ee-cC-CCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHhhh
Q 002051 264 CGRLLN---YK-KD-GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (975)
Q Consensus 264 ~~e~~~---~~-kd-G~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~ 314 (975)
..+... .+ .+ |..+|+.+++.|+++.+|.+.|++++++|||++|++|++|+
T Consensus 88 ~~~~~~~~~~~~~~~g~~~~~~~~~~pi~~~~g~~~g~~~~~~DITe~k~~e~~l~ 143 (158)
T 3k3c_A 88 SGSEWRLQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVRARQAAE 143 (158)
T ss_dssp EEEEEEEEEESSSSCEEEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHHHHHHHH
T ss_pred cccceeEEeccCCCCcceEEEEEEEEEeECCCCCEEEEEEEEEehhHHHHHHHHHH
Confidence 544322 22 22 77899999999999999999999999999999999999876
|
| >3nja_A Probable ggdef family protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.37A {Chromobacterium violaceum} | Back alignment and structure |
|---|
Probab=99.59 E-value=3.6e-15 Score=138.65 Aligned_cols=116 Identities=13% Similarity=0.027 Sum_probs=96.3
Q ss_pred cHHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcC--CCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEE
Q 002051 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILG--RNCRFLQGPETDPATVRKIRAAIDNQTDVTVQL 550 (975)
Q Consensus 473 ~l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG--~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~ 550 (975)
.|+.++++++++++++|.++. ++++|+++++++||+.++++| ..+..+++|++...+...+...+..+..+..++
T Consensus 8 ~l~~~~~~~~~~i~~~d~~~~---~~~~n~~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~e~ 84 (125)
T 3nja_A 8 LLHTAESDAGIGSWVLHMESG---RLEWSQAVHDIFGTDSATFDATEDAYFQRVHPDDRARVRRELDRHVLGDRPFDVEY 84 (125)
T ss_dssp ---------CCEEEEEETTTT---EEEECHHHHHHHTCCTTTCCCBHHHHHHHBCTTTHHHHHHHHHHHHHSCCCEEEEE
T ss_pred HHHHHHHhCCeeEEEEEcCCC---cEEECHHHHHHhCCCcccccccHHHHHhhcChhHHHHHHHHHHHHHhcCCCceEEE
Confidence 488999999999999999777 999999999999999999999 445567788888888888888899998899999
Q ss_pred EEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccc
Q 002051 551 INYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (975)
Q Consensus 551 ~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~ 591 (975)
+..+++|+.+|+.++..|+++.+|.+.+++++++|||++|+
T Consensus 85 ~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~g~~~DITe~k~ 125 (125)
T 3nja_A 85 RIVRPDGQVRELLERNHIQRQASGQVDHLWGTVIDMTEHKQ 125 (125)
T ss_dssp EEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCC---
T ss_pred EEECCCCCEEEEEEeeEEEECCCCCEEEEEEEEEecccccC
Confidence 99999999999999999999999999999999999999974
|
| >2z6d_A Phototropin-2; PAS-fold, LOV-fold, alternative splicing, ATP-binding, chromophore, flavoprotein, FMN, kinase, membrane, nucleotide-binding; HET: FMN; 2.00A {Arabidopsis thaliana} PDB: 2z6c_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=3.1e-14 Score=131.71 Aligned_cols=118 Identities=44% Similarity=0.856 Sum_probs=107.4
Q ss_pred cHHHHHHhccCcEEEEc---CCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEE
Q 002051 473 DLATTLERIEKNFVITD---PRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQ 549 (975)
Q Consensus 473 ~l~~i~e~~~d~i~i~D---~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e 549 (975)
.++.++++++++++++| .+|. |+++|+++++++||+.++++|+++..+.+++........+...+..+..+..+
T Consensus 7 ~~~~~~~~~~~~i~~~d~~d~~~~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (130)
T 2z6d_A 7 ELKTALSTLQQTFVVSDATQPHCP---IVYASSGFFTMTGYSSKEIVGRNCRFLQGPDTDKNEVAKIRDCVKNGKSYCGR 83 (130)
T ss_dssp CHHHHHHHTTCEEEEEETTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHhcccceeeeeccCCCCc---EEEecHHHHHHhCcCHHHHcCCChhhccCCCCCchHHHHHHHHHHcCCcceeE
Confidence 48999999999999999 7666 99999999999999999999999888888888888888888888899989999
Q ss_pred EEEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccccc
Q 002051 550 LINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (975)
Q Consensus 550 ~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~e 593 (975)
+...+++|+.+|+.+++.|+.+.+|.+.+++++++|||++|+++
T Consensus 84 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~~e 127 (130)
T 2z6d_A 84 LLNYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQVEVSKYTEGV 127 (130)
T ss_dssp EEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCTTC---
T ss_pred EEEEcCCCcEEEEEEEEEEEECCCCCeeEEEEEEecchHHHHhh
Confidence 99999999999999999999999999999999999999998844
|
| >2vv6_A FIXL, sensor protein FIXL; signaling protein, transferase, phosphoprotein, nitrogen FIX PER-ARNT-SIM, metal-binding, PAS, iron, heme; HET: HEM; 1.5A {Bradyrhizobium japonicum} PDB: 1xj6_A* 1xj4_A* 2vv7_A* 2vv8_A* 1lsw_A* 1dp8_A* 1dp9_A* 1drm_A* 1lsv_A* 1dp6_A* 1lsx_A* 1lt0_A* 1y28_A* 2cmn_A* 1xj3_A* 1xj2_A* 2owh_A* 2owj_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=4.6e-15 Score=138.53 Aligned_cols=111 Identities=18% Similarity=0.189 Sum_probs=82.1
Q ss_pred hccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCc----EEEEEEEEcc
Q 002051 480 RIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD----VTVQLINYTK 555 (975)
Q Consensus 480 ~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~----~~~e~~~~~k 555 (975)
+++++|+++|.+|+ |++||++|++++||+++|++|++...+++++........+......+.. ...++..+++
T Consensus 1 ~~~d~i~~~d~~g~---i~~~N~a~~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (119)
T 2vv6_A 1 TIPDAMIVIDGHGI---IQLFSTAAERLFGWSELEAIGQNVNILMPEPDRSRHDSYISRYRTTSDPHIIGIGRIVTGKRR 77 (119)
T ss_dssp -CCCEEEEEETTSB---EEEECHHHHHHHCCCHHHHTTSBGGGGSCTTHHHHHHHHHHHHHHHCCCSSTTTCEEEEEECT
T ss_pred CCcceEEEECCCCe---EEEEhHHHHHHhCCCHHHHcCCCHHHhCCchHHHHHHHHHHHHhcCCCcccCCCceEEEEEeC
Confidence 36899999999766 9999999999999999999999988887776554444444444444432 3457788999
Q ss_pred CCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccccccC
Q 002051 556 SGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRN 595 (975)
Q Consensus 556 dG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~e~~ 595 (975)
||+.+|++++++|+.+. ...+++++++|||+||+++++
T Consensus 78 dG~~~~~~~~~~~~~~~--~~~~~~~~~~DITerk~~e~~ 115 (119)
T 2vv6_A 78 DGTTFPMHLSIGEMQSG--GEPYFTGFVRDLTEHQQTQAR 115 (119)
T ss_dssp TSCEEEEEEEEEEEEET--TEEEEEEEEEECC--------
T ss_pred CCCEEEEEEEEEEEEEC--CeEEEEEEEEEcHHHHHHHHH
Confidence 99999999999999874 335689999999999986544
|
| >3lyx_A Sensory BOX/ggdef domain protein; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Colwellia psychrerythraea} | Back alignment and structure |
|---|
Probab=99.58 E-value=1.4e-14 Score=133.13 Aligned_cols=120 Identities=18% Similarity=0.298 Sum_probs=108.8
Q ss_pred chHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEE
Q 002051 186 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG 265 (975)
Q Consensus 186 ~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~ 265 (975)
+..+.++.++++++++++++|. +|+|+++|++|++++|++.++++|+++..+.++.........+...+..+..+..
T Consensus 4 ~~~~~~~~~~~~~~~~i~~~d~---~~~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (124)
T 3lyx_A 4 DILKQRAKAFDYVFDAIVVTDL---QGFIIDWNKGSETLYGYSKEQAIGQPVNMLHVPGDTEHITSEVISAVENQGKWTG 80 (124)
T ss_dssp CHHHHHHHGGGTCSSEEEEEET---TCBEEEECHHHHHHHCCCHHHHTTSBGGGGSCTTTHHHHHHHHHHHHHHTSCEEE
T ss_pred hHHHHHHHHHhhcCceEEEECC---CCcEeehhhHHHHHhCCCHHHHcCCCHHHhcCcchhhHHHHHHHHHHHcCCcccc
Confidence 4567889999999999999999 9999999999999999999999999988777777766777778888999999999
Q ss_pred EEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhH
Q 002051 266 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTE 308 (975)
Q Consensus 266 e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~ 308 (975)
+....+++|..+|+.+++.|+.+.+|.+.+++++++|||++|+
T Consensus 81 ~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~ 123 (124)
T 3lyx_A 81 EIRMLHKDGHIGWIESMCVPIYGENYQMVGALGINRDITKRKK 123 (124)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECSTTCEEEEEEEEEECSCC--
T ss_pred eEEEEccCCCEEEEEEEEEEEECCCCCEEEEEEEEecchhhhc
Confidence 9999999999999999999999999999999999999999876
|
| >3mxq_A Sensor protein; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.78A {Vibrio cholerae o1 biovar el tor} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.8e-15 Score=148.83 Aligned_cols=125 Identities=14% Similarity=0.182 Sum_probs=100.8
Q ss_pred ccCcchHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCC
Q 002051 182 KGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ 261 (975)
Q Consensus 182 ~~L~~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~ 261 (975)
.++++...+|+++++++++||+++|. +|+|++||+++++++|++++|++|+++.+++|. ....+...+++++..|.
T Consensus 15 ~~~~~~~~~l~~il~~~~~gi~v~D~---~g~I~~~N~a~~~~~G~~~~eviG~~~~~~~p~-~~~~~~~~l~~vl~~G~ 90 (152)
T 3mxq_A 15 NAMAKSRLLLSELLDQLSFALCIVRN---DYVIVKVNEYFESRVIFDGETMQGKNILELFPE-SADYLKRKIDTALVIES 90 (152)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEET---TSBEEEECHHHHHTSSSCHHHHTTSBHHHHSGG-GHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEcC---CCEEEEECHHHHHHHCcCHHHHCCCCHHHhcCC-hHHHHHHHHHHHHhcCC
Confidence 35777778899999999999999999 999999999999999999999999999988887 55566677889999887
Q ss_pred cEEEE---------EEE---EecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHH
Q 002051 262 SYCGR---------LLN---YKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGA 310 (975)
Q Consensus 262 ~~~~e---------~~~---~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e 310 (975)
+.... +.. ..++|..+|..+++.|++|++|++.|++++++|||+++++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ti~Pl~d~~G~v~gv~~ii~DVTe~~~a~ 151 (152)
T 3mxq_A 91 SSFSSWEQKPHLLPFKSSRPVSGEEEQMYQNLEVIPIHSEDGTIEHVCLCVYDVTIQASQQ 151 (152)
T ss_dssp CEEEECCSSSCSSCC----------CCEEEEEEEEEEECTTSCEEEEEEEEEEEECC----
T ss_pred ceeeecccccccccccccCCCCCCCcEEEEEEEEEEEECCCCCEEEEEEEEEECCHHHhcc
Confidence 63321 111 23577888999999999999999999999999999998754
|
| >2wkq_A NPH1-1, RAS-related C3 botulinum toxin substrate 1; transferase, cell adhesion, nucleotide-binding, protein engineering, RAS superfamily LOV2; HET: GTP FMN; 1.60A {Avena sativa} PDB: 2wkr_A* 2wkp_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=1.3e-14 Score=161.98 Aligned_cols=116 Identities=89% Similarity=1.304 Sum_probs=108.4
Q ss_pred HHHHHhccCcEEEEcC---CCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEE
Q 002051 475 ATTLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLI 551 (975)
Q Consensus 475 ~~i~e~~~d~i~i~D~---~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~ 551 (975)
..++++++++|+++|. +|+ |+|||++|++++||+++|++|+++..+.+++......+.+...+..+..+..+++
T Consensus 14 ~~~~~~~~~~i~~~D~~~~~g~---i~~~N~a~~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 90 (332)
T 2wkq_A 14 ATTLERIEKNFVITDPRLPDNP---IIFASDSFLQLTEYSREEILGRNARFLQGPETDRATVRKIRDAIDNQTEVTVQLI 90 (332)
T ss_dssp CCCGGGCCSEEEEECTTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HhHhhcCCCcEEEecCCCCCCC---EEEeehHHHHHhCCCHHHHcCCCchhhcCCCCCHHHHHHHHHHHHcCCeeEEEEE
Confidence 4567899999999999 777 9999999999999999999999999899988888888889999999999999999
Q ss_pred EEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccccc
Q 002051 552 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (975)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~e 593 (975)
.+++||+.+|+++++.|++|.+|.+.+++++++|||++|+.+
T Consensus 91 ~~~~dG~~~~~~~~~~pi~d~~g~~~~~v~~~~DITe~k~~e 132 (332)
T 2wkq_A 91 NYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVRDA 132 (332)
T ss_dssp EECTTCCEEEEEEEEEEEECTTSCEEEEEEEEEEESSCCCHH
T ss_pred EEcCCCCEEEEeeEEEEeEcCCCCEEEEEEEeccCchhhhhh
Confidence 999999999999999999999999999999999999998743
|
| >3lyx_A Sensory BOX/ggdef domain protein; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Colwellia psychrerythraea} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.9e-14 Score=130.98 Aligned_cols=115 Identities=20% Similarity=0.223 Sum_probs=104.6
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~ 553 (975)
++.++++++++++++|.+|. |+++|+++++++|++.++++|++...+.+++........+...+..+..+..++...
T Consensus 9 ~~~~~~~~~~~i~~~d~~~~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (124)
T 3lyx_A 9 RAKAFDYVFDAIVVTDLQGF---IIDWNKGSETLYGYSKEQAIGQPVNMLHVPGDTEHITSEVISAVENQGKWTGEIRML 85 (124)
T ss_dssp HHHGGGTCSSEEEEEETTCB---EEEECHHHHHHHCCCHHHHTTSBGGGGSCTTTHHHHHHHHHHHHHHTSCEEEEEEEE
T ss_pred HHHHHhhcCceEEEECCCCc---EeehhhHHHHHhCCCHHHHcCCCHHHhcCcchhhHHHHHHHHHHHcCCcccceEEEE
Confidence 88999999999999999766 999999999999999999999998877777766667777888888999999999999
Q ss_pred ccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccc
Q 002051 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (975)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~ 591 (975)
+++|..+|+.+++.|+.+.+|.+.+++++++|||++|+
T Consensus 86 ~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~ 123 (124)
T 3lyx_A 86 HKDGHIGWIESMCVPIYGENYQMVGALGINRDITKRKK 123 (124)
T ss_dssp CTTSCEEEEEEEEEEEECSTTCEEEEEEEEEECSCC--
T ss_pred ccCCCEEEEEEEEEEEECCCCCEEEEEEEEecchhhhc
Confidence 99999999999999999999999999999999999975
|
| >3bwl_A Sensor protein; structural genomics, APC87707.1, PAS domain, HTR-like protei protein structure initiative; HET: MSE I3A; 1.73A {Haloarcula marismortui atcc 43049} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.1e-14 Score=136.89 Aligned_cols=124 Identities=17% Similarity=0.148 Sum_probs=96.0
Q ss_pred cccccccccccCcchHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhh--cCCCCCCCCCCCCCHHHH
Q 002051 173 EMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEV--VGRNCRFLQGAGTDPEDV 250 (975)
Q Consensus 173 di~~~~~~e~~L~~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEl--iG~~~~~l~~~~~~~~~~ 250 (975)
++|++++.+++|+++++.|+.++++++++|+++|. +|+|+++|++|++++||+.+|+ +|+++..+.+ ......
T Consensus 1 ~~t~r~~~e~~L~~~~~~~~~l~e~~~~~i~~~d~---~g~i~~~N~a~~~~~G~~~~el~g~g~~~~~~~~--~~~~~~ 75 (126)
T 3bwl_A 1 SNAERKRREKRLEETSSRLEALFENSPDMIDVLDA---DGTICEVNQRFCAELGYDESEVLGRSIWEFDLMF--DAEDVQ 75 (126)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCSSEEEEECT---TCBEEEECHHHHHHHTCCGGGTTTSBGGGTBTTC--CHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHHhhCCcEEEEEcC---CCCEEEEcHHHHHHhCCCHHHHhhCCCchhhccC--CHHHHH
Confidence 47889999999999999999999999999999999 9999999999999999999999 4676666655 222222
Q ss_pred HHHHHHHHcCCcEEEEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccc
Q 002051 251 AKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (975)
Q Consensus 251 ~~l~~~l~~g~~~~~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDIT 304 (975)
..+. ....+.....+....++||+.+|++++..++.+ +|. .+++++++|||
T Consensus 76 ~~~~-~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~-~~~-~~~~~~~~DIT 126 (126)
T 3bwl_A 76 TQLS-GFSVDERRKFEGLYERRDGSTMSVEVHLLRFNL-EGE-DRFLAISRDIT 126 (126)
T ss_dssp HHHH-TCCTTCEEEEEEEEECTTSCEEEEEEEEEEEEE-TTE-EEEEEEEEEC-
T ss_pred HHHH-HHhcCCCcceEEEEEeCCCCEEEEEEEeEEEec-CCc-EEEEEEEEeCC
Confidence 2211 112334455566777999999999998888743 344 36789999998
|
| >3h9w_A Diguanylate cyclase with PAS/PAC sensor; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.90A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=99.55 E-value=7.1e-15 Score=136.23 Aligned_cols=111 Identities=14% Similarity=0.093 Sum_probs=97.7
Q ss_pred ccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCC-CCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEccCCcE
Q 002051 481 IEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRN-CRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKK 559 (975)
Q Consensus 481 ~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~-~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~~kdG~~ 559 (975)
+++++|.+|.. ++.++|+|+++++++||++++++|.. +..++||++...+...+...+..+..+..+++++++||+.
T Consensus 2 a~~giw~~d~~--~~~~~~~n~~~~~l~G~~~~e~~~~~~~~~~ihpdd~~~~~~~~~~~~~~~~~~~~e~r~~~~dG~~ 79 (115)
T 3h9w_A 2 TKAIPWKINWQ--TMAFEYIGPQIEALLGWPQGSWKSVEDWATRMHPEDQEWVVNFCVKQSECGVDHEADYRALHRDGHY 79 (115)
T ss_dssp -CCEEEEEETT--TTEEEEECTHHHHHHCSCGGGCCBHHHHHHSBCHHHHHHHHHHHHHHHHTTCCEEEEEEEECTTSCE
T ss_pred cceEEEEEEcC--CCcEEEEChhHHHHhCCChHHccCHHHHHHhcCHHHHHHHHHHHHHHHhcCCcccEEEEEEcCCCCE
Confidence 57899999953 44499999999999999999999932 3457899988888888999999988999999999999999
Q ss_pred EEEEEEEeeeecCCCCEEEEEEEeecCCcccccc
Q 002051 560 FWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (975)
Q Consensus 560 ~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~e 593 (975)
+|++.+..|++|++|.+++++|++.|||++|++|
T Consensus 80 ~w~~~~~~~~~d~~G~~~~~~G~~~Dit~~k~~~ 113 (115)
T 3h9w_A 80 VWIRDVVHVVRDDSGEVEALIGFMFDISLEHHHH 113 (115)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEEEECGGGGC--
T ss_pred EEEEEEEEEEECCCCCEEEEEEEEeccCcccccc
Confidence 9999999999999999999999999999999855
|
| >3kx0_X Uncharacterized protein RV1364C/MT1410; PAS domain, sensory domain, mycobacteium tuberculos molecule binding domain; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.2e-14 Score=147.82 Aligned_cols=123 Identities=11% Similarity=0.127 Sum_probs=104.1
Q ss_pred cchHHHHHHHHHhccCcEEEEe-CCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcE
Q 002051 185 PRVSDIVKDALSTFQQTFVVSD-ATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSY 263 (975)
Q Consensus 185 ~~~~~~l~~ild~~~d~i~i~D-~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~ 263 (975)
..+.+.|+.++++++++|+++| . +|+|+++|++|++++||+ +++|+++..++++.........+..++..|...
T Consensus 33 ~~~~~~l~~l~~~~~~~i~~~d~~---~g~i~~~N~a~~~l~G~~--~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 107 (185)
T 3kx0_X 33 VGAAEDVRRIFEHIPAILVGLEGP---DHRFVAVNAAYRGFSPLL--DTVGQPAREVYPELEGQQIYEMLDRVYQTGEPQ 107 (185)
T ss_dssp TCCHHHHHHHHHHCSSEEEEEETT---TTEEEEECHHHHHHCCCC--SCTTSBHHHHCTTSCSSSSHHHHHHHHHHCCCE
T ss_pred hhhHHHHHHHHhcCCceEEEEECC---CcEEEEEcHHHHHHcCCc--cccCCcHHHHCCchhhhhHHHHHHHHHHcCCcc
Confidence 4667889999999999999999 8 999999999999999999 999999888888777666667788888888876
Q ss_pred EEEEEEE---ecC--CCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHh
Q 002051 264 CGRLLNY---KKD--GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKD 312 (975)
Q Consensus 264 ~~e~~~~---~kd--G~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~ 312 (975)
..+.... +++ |..+|+.+++.|+++.+|.+.|++++++|||++|++|++
T Consensus 108 ~~~~~~~~~~~~~~gg~~~~~~~~~~pi~~~~g~~~g~~~~~~DITerk~~e~~ 161 (185)
T 3kx0_X 108 SGSEWRLQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVRARQA 161 (185)
T ss_dssp EEEEEEEC--------CCEEEEEEEEEEECTTSCEEEEEEEEEECHHHHTTCC-
T ss_pred cccceeEEeeccCCCCccEEEEEEEEEEECCCCCEEEEEEEEEeCCHHHHHHHH
Confidence 6543322 222 788999999999999999999999999999999999988
|
| >2wkq_A NPH1-1, RAS-related C3 botulinum toxin substrate 1; transferase, cell adhesion, nucleotide-binding, protein engineering, RAS superfamily LOV2; HET: GTP FMN; 1.60A {Avena sativa} PDB: 2wkr_A* 2wkp_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=2.8e-14 Score=159.19 Aligned_cols=122 Identities=39% Similarity=0.789 Sum_probs=112.9
Q ss_pred HHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEec
Q 002051 193 DALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKK 272 (975)
Q Consensus 193 ~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~k 272 (975)
.+++.++++|+++|...++|+|+|+|++|++++||+++|++|+++..+.+++........++..+..+..+..+++.+++
T Consensus 15 ~~~~~~~~~i~~~D~~~~~g~i~~~N~a~~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 94 (332)
T 2wkq_A 15 TTLERIEKNFVITDPRLPDNPIIFASDSFLQLTEYSREEILGRNARFLQGPETDRATVRKIRDAIDNQTEVTVQLINYTK 94 (332)
T ss_dssp CCGGGCCSEEEEECTTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHTTCCEEEEEEEECT
T ss_pred hHhhcCCCcEEEecCCCCCCCEEEeehHHHHHhCCCHHHHcCCCchhhcCCCCCHHHHHHHHHHHHcCCeeEEEEEEEcC
Confidence 45788999999999766688999999999999999999999999998888888888889999999999999999999999
Q ss_pred CCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHhhh
Q 002051 273 DGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (975)
Q Consensus 273 dG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~ 314 (975)
||+.+|+++++.|++|.+|++.+++++++|||++++++++++
T Consensus 95 dG~~~~~~~~~~pi~d~~g~~~~~v~~~~DITe~k~~e~~~~ 136 (332)
T 2wkq_A 95 SGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVRDAAERE 136 (332)
T ss_dssp TCCEEEEEEEEEEEECTTSCEEEEEEEEEEESSCCCHHHHHH
T ss_pred CCCEEEEeeEEEEeEcCCCCEEEEEEEeccCchhhhhhhhcc
Confidence 999999999999999999999999999999999999887754
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.54 E-value=3e-15 Score=168.11 Aligned_cols=114 Identities=12% Similarity=0.128 Sum_probs=88.4
Q ss_pred cccccccccCCceEEEEEEEeCCCeEEEEEEeccchhcc--------------------------------------ccc
Q 002051 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN--------------------------------------RNK 712 (975)
Q Consensus 671 y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~--------------------------------------~~~ 712 (975)
|.+.+.||.|+||.||+|.+ .+|+.||||+++...... ...
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d-~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVAD-EKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp SEEEEEEEECSSEEEEEEEC-TTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEecCEeeeCCceEEEEEEC-CCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 89999999999999999998 469999999976431100 000
Q ss_pred cCC------eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC-----
Q 002051 713 TKT------HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG----- 781 (975)
Q Consensus 713 ~~~------~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g----- 781 (975)
... ..||||||+.|++|..+.. ......++.||+.+|.|||++|||||||||.|||++.+|
T Consensus 176 ~vp~p~~~~~~~LVME~i~G~~L~~l~~--------~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~ 247 (397)
T 4gyi_A 176 PVPEPIAQSRHTIVMSLVDALPMRQVSS--------VPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDP 247 (397)
T ss_dssp SCCCEEEEETTEEEEECCSCEEGGGCCC--------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCT
T ss_pred CCCeeeeccCceEEEEecCCccHhhhcc--------cHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccc
Confidence 011 1269999999888865431 123567889999999999999999999999999998876
Q ss_pred -----cEEEeeccCCCc
Q 002051 782 -----HVSLTDFDLSCL 793 (975)
Q Consensus 782 -----~vkL~DFG~a~~ 793 (975)
.+.|+||+.+..
T Consensus 248 ~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 248 SSITLTPIIIXFPQMVS 264 (397)
T ss_dssp TSEEEEEEECCCTTCEE
T ss_pred cccccceEEEEeCCccc
Confidence 389999997743
|
| >3luq_A Sensor protein; PAS, histidine, kinase, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: PGE; 2.49A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=99.53 E-value=5.6e-14 Score=128.38 Aligned_cols=112 Identities=13% Similarity=0.142 Sum_probs=93.1
Q ss_pred HHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEE-E
Q 002051 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG-R 266 (975)
Q Consensus 188 ~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~-e 266 (975)
+++|+.++++++++|+++|. +|+|+++|++|++++||+.++++|+++..++ ++........+...+. ++.... +
T Consensus 2 e~~~~~~~~~~~~~i~~~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~ 76 (114)
T 3luq_A 2 DERLRLFTEHAPAALAMFDR---EMRYLAVSRRWREDYGLGDGDILGMSHYDIF-PEIGEEWKSVHRRGLA-GEVIRVEE 76 (114)
T ss_dssp CHHHHHHHHTCSSEEEEEET---TCBEEEECHHHHHHTTCCSSCCTTCBHHHHC-TTCCHHHHHHHHHHHT-TCCEEEEE
T ss_pred hHHHHHHHhcCCceEEEEcC---CcEEEEECHHHHHHHCCCHHHHcCCcHHHHC-CccHHHHHHHHHHHhc-CCcceeee
Confidence 46789999999999999999 9999999999999999999999999988776 4444555555555555 444444 4
Q ss_pred EEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccc
Q 002051 267 LLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (975)
Q Consensus 267 ~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDIT 304 (975)
....+++|..+|+.+++.|+++.+|.+.|++++++|||
T Consensus 77 ~~~~~~~g~~~~~~~~~~p~~~~~g~~~~~~~~~~DIT 114 (114)
T 3luq_A 77 DCFVRADGRTQWLRWEVRPWYEGEGRVGGVVIFTEDIT 114 (114)
T ss_dssp EEEEC--CCEEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred eEEEcCCCcEEEEEEEEEEeECCCCCEEEEEEEEeeCC
Confidence 47789999999999999999999999999999999998
|
| >3sw1_A Sensory box protein; light-oxygen-voltage, LOV, PAS, signaling protein; HET: FMN; 2.63A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.4e-14 Score=142.39 Aligned_cols=116 Identities=34% Similarity=0.597 Sum_probs=108.6
Q ss_pred HHHHHHhccCcEEEEcCCC---CCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEE
Q 002051 474 LATTLERIEKNFVITDPRL---PDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQL 550 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g---~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~ 550 (975)
++.++++++++|+++|.+| + |+++|+++++++||+.++++|+++..+.+++........+...+..+..+..++
T Consensus 27 ~~~i~~~~~~~i~~~d~~~~~~~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (162)
T 3sw1_A 27 LQSMVDASNDGIVVAEKEGDDTI---LIYVNAAFEYLTGYSRDEILYQDCRFLQGDDRDQLGRARIRKAMAEGRPCREVL 103 (162)
T ss_dssp HHHHHHTCSSEEEEEEEETTEEE---EEEECHHHHHHHTCCHHHHTTSBGGGGTTTCCCCHHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHhhccCcEEEEeCCCCccE---EEEECHHHHHHHCCCHHHHcCCCcceecCCCcCHHHHHHHHHHHhcCCCCcceE
Confidence 8999999999999999976 6 999999999999999999999998888888888888888888899999999999
Q ss_pred EEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCccccc
Q 002051 551 INYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 592 (975)
Q Consensus 551 ~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~ 592 (975)
...+++|..+|+.+++.|+.+.+|.+.+++++++|||++|++
T Consensus 104 ~~~~~~g~~~~~~~~~~~i~~~~g~~~~~~~~~~DiTe~k~~ 145 (162)
T 3sw1_A 104 RNYRKDGSAFWNELSITPVKSDFDQRTYFIGIQKDVSRQVEL 145 (162)
T ss_dssp EEECTTCCEEEEEEEEEEEECSSSSCEEEEEEEEECHHHHHH
T ss_pred EEECCCCCEEEEEEEEEEeecCCCCEEEEEEEEEeCcHHHHH
Confidence 999999999999999999999999999999999999999873
|
| >4dj3_A Period circadian protein homolog 3; PAS domain, circadian rhythm, protein binding; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.53 E-value=2.8e-13 Score=148.81 Aligned_cols=107 Identities=13% Similarity=0.131 Sum_probs=91.4
Q ss_pred CcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCc---EEEEEEEEccCCcE
Q 002051 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD---VTVQLINYTKSGKK 559 (975)
Q Consensus 483 d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~---~~~e~~~~~kdG~~ 559 (975)
..+...+.+|+ |+|||+++..++||.++|++|+++..++||++.....+.+.+.+..++. ...+++++++||+.
T Consensus 175 ~Fitrh~~dG~---~~yvs~~~~~lLGY~peELig~s~~~~vHPdD~~~~~~~~~~~l~~~~~~~f~s~~yR~~~kdG~~ 251 (317)
T 4dj3_A 175 IFTTTHTPGCV---FLEVDERAVPLLGYLPQDLIGTSILTYLHPEDRPLMVAIHQKVLKYAGHPPFEHSPVRFCTQNGEY 251 (317)
T ss_dssp EEEEEECTTSB---EEEECTTHHHHHSCCHHHHTTSBGGGGBCTTTTTHHHHHHHHHHHTTTSCCEECCCEEEECTTSCE
T ss_pred ceEEEecCCCe---EEEEChHHhhhcCcChHHHcCCCHHHeECHHHHHHHHHHHHHHHHcCCCccccceEEEEEccCCCE
Confidence 45666677555 9999999999999999999999999999999999988888888887665 45789999999999
Q ss_pred EEEEEEEeeeecC-CCCEEEEEEEeecCCccccc
Q 002051 560 FWNLFHLQPMRDQ-KGEVQYFIGVQLDGSEHLEP 592 (975)
Q Consensus 560 ~wv~~~~~pi~d~-~G~i~~~v~i~rDITerk~~ 592 (975)
+|++.+.++++|. .+++.++++..+-|+....+
T Consensus 252 vwvet~~~~~~np~s~~~e~II~~h~v~~~p~~~ 285 (317)
T 4dj3_A 252 VILDSSWSSFVNPWSRKVSFIIGRHKVRTSPLNE 285 (317)
T ss_dssp EEEEEEEEEEECSSSCCEEEEEEEEEECCCCSSS
T ss_pred EEEEEEEEEEECCCCCcccEEEEEEEeccCCCCC
Confidence 9999999999986 56788888888877666554
|
| >3bwl_A Sensor protein; structural genomics, APC87707.1, PAS domain, HTR-like protei protein structure initiative; HET: MSE I3A; 1.73A {Haloarcula marismortui atcc 43049} | Back alignment and structure |
|---|
Probab=99.52 E-value=5.6e-14 Score=132.03 Aligned_cols=123 Identities=15% Similarity=0.144 Sum_probs=93.3
Q ss_pred CchhhHHHHHHHhhc-CcHHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhc--CCCCCCcCCCCCCHHHH
Q 002051 457 DSVDDKVRQKEMRKG-IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEIL--GRNCRFLQGPETDPATV 533 (975)
Q Consensus 457 d~~er~~~~~~l~~~-~~l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEll--G~~~~~l~~~~~~~~~~ 533 (975)
++|+|++.+++|+.+ ..|+.++++++++|+++|.+|+ |++||++|++++||+++|++ |++...+.+ +.....
T Consensus 1 ~~t~r~~~e~~L~~~~~~~~~l~e~~~~~i~~~d~~g~---i~~~N~a~~~~~G~~~~el~g~g~~~~~~~~--~~~~~~ 75 (126)
T 3bwl_A 1 SNAERKRREKRLEETSSRLEALFENSPDMIDVLDADGT---ICEVNQRFCAELGYDESEVLGRSIWEFDLMF--DAEDVQ 75 (126)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCSSEEEEECTTCB---EEEECHHHHHHHTCCGGGTTTSBGGGTBTTC--CHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHHhhCCcEEEEEcCCCC---EEEEcHHHHHHhCCCHHHHhhCCCchhhccC--CHHHHH
Confidence 578999999999876 5689999999999999999766 99999999999999999994 566666655 222222
Q ss_pred HHHHHHHHcCCcEEEEEEEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCC
Q 002051 534 RKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (975)
Q Consensus 534 ~~~~~~l~~g~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDIT 587 (975)
..+.. ...+.....+.++.++||+.+|++++..++.+ +|. .+++++++|||
T Consensus 76 ~~~~~-~~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~-~~~-~~~~~~~~DIT 126 (126)
T 3bwl_A 76 TQLSG-FSVDERRKFEGLYERRDGSTMSVEVHLLRFNL-EGE-DRFLAISRDIT 126 (126)
T ss_dssp HHHHT-CCTTCEEEEEEEEECTTSCEEEEEEEEEEEEE-TTE-EEEEEEEEEC-
T ss_pred HHHHH-HhcCCCcceEEEEEeCCCCEEEEEEEeEEEec-CCc-EEEEEEEEeCC
Confidence 22111 12334456677788999999999999888854 444 45789999998
|
| >3k3c_A Protein RV1364C/MT1410; sensor, PAS, signal transduction, fatty-acid binding, sigma regulator, signaling protein; HET: PLM; 1.62A {Mycobacterium tuberculosis} PDB: 3k3d_A | Back alignment and structure |
|---|
Probab=99.52 E-value=2.3e-14 Score=140.55 Aligned_cols=120 Identities=11% Similarity=0.089 Sum_probs=99.7
Q ss_pred HhhcCcHHHHHHhccCcEEEEc-CCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcE
Q 002051 468 MRKGIDLATTLERIEKNFVITD-PRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDV 546 (975)
Q Consensus 468 l~~~~~l~~i~e~~~d~i~i~D-~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~ 546 (975)
++....|+.++++++++|+++| .+|+ |+++|+++++++||+ +++|+++..++++.........+..++..|...
T Consensus 13 ~~~~~~~~~~~~~~~~~i~~~d~~~~~---i~~~N~~~~~~~g~~--~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 87 (158)
T 3k3c_A 13 VGAAEDVRRIFEHIPAILVGLEGPDHR---FVAVNAAYRGFSPLL--DTVGQPAREVYPELEGQQIYEMLDRVYQTGEPQ 87 (158)
T ss_dssp TCCHHHHHHHHHHCSSEEEEEETTTTE---EEEECHHHHHHCTTC--CSTTSBHHHHSGGGGGTTHHHHHHHHHHHCCCE
T ss_pred HHHHHHHHHHHhcCCceEEEEECCCcE---eHHHHHHHHHHcCCc--hhcCCcHHHhCCchhHHHHHHHHHHHHHhCCcc
Confidence 3334459999999999999999 8666 999999999999999 999999888887776666677888888788875
Q ss_pred EEEEE-E--Ecc-C-CcEEEEEEEEeeeecCCCCEEEEEEEeecCCccccc
Q 002051 547 TVQLI-N--YTK-S-GKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 592 (975)
Q Consensus 547 ~~e~~-~--~~k-d-G~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~ 592 (975)
..+.. . .+. + |..+|+.+++.|++|.+|.+.|++++++|||++|++
T Consensus 88 ~~~~~~~~~~~~~~~g~~~~~~~~~~pi~~~~g~~~g~~~~~~DITe~k~~ 138 (158)
T 3k3c_A 88 SGSEWRLQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVRA 138 (158)
T ss_dssp EEEEEEEEEESSSSCEEEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHHH
T ss_pred cccceeEEeccCCCCcceEEEEEEEEEeECCCCCEEEEEEEEEehhHHHHH
Confidence 54322 2 232 2 778999999999999999999999999999999883
|
| >3h9w_A Diguanylate cyclase with PAS/PAC sensor; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.90A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.1e-14 Score=133.02 Aligned_cols=112 Identities=13% Similarity=0.100 Sum_probs=97.5
Q ss_pred ccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCC-CCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCCE
Q 002051 198 FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRN-CRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTP 276 (975)
Q Consensus 198 ~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~-~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~ 276 (975)
+++++|.+|.. +|+++|+|+++++++||++++++|.. +..+++|++.......+...+..+..+..+++.+++||+.
T Consensus 2 a~~giw~~d~~--~~~~~~~n~~~~~l~G~~~~e~~~~~~~~~~ihpdd~~~~~~~~~~~~~~~~~~~~e~r~~~~dG~~ 79 (115)
T 3h9w_A 2 TKAIPWKINWQ--TMAFEYIGPQIEALLGWPQGSWKSVEDWATRMHPEDQEWVVNFCVKQSECGVDHEADYRALHRDGHY 79 (115)
T ss_dssp -CCEEEEEETT--TTEEEEECTHHHHHHCSCGGGCCBHHHHHHSBCHHHHHHHHHHHHHHHHTTCCEEEEEEEECTTSCE
T ss_pred cceEEEEEEcC--CCcEEEEChhHHHHhCCChHHccCHHHHHHhcCHHHHHHHHHHHHHHHhcCCcccEEEEEEcCCCCE
Confidence 57899999942 78899999999999999999999932 2357788888888888889999998899999999999999
Q ss_pred EEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHH
Q 002051 277 FWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAK 311 (975)
Q Consensus 277 ~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~ 311 (975)
+|++.+..|++|++|++++++|+..|||++|++|+
T Consensus 80 ~w~~~~~~~~~d~~G~~~~~~G~~~Dit~~k~~~~ 114 (115)
T 3h9w_A 80 VWIRDVVHVVRDDSGEVEALIGFMFDISLEHHHHH 114 (115)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEEEECGGGGC---
T ss_pred EEEEEEEEEEECCCCCEEEEEEEEeccCccccccc
Confidence 99999999999999999999999999999999875
|
| >3luq_A Sensor protein; PAS, histidine, kinase, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: PGE; 2.49A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=99.51 E-value=8.3e-14 Score=127.22 Aligned_cols=110 Identities=15% Similarity=0.142 Sum_probs=91.9
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~ 553 (975)
|+.++++++++|+++|.+|+ |+++|+++++++||+.++++|+++..++ |++.......+...+..+.....+....
T Consensus 5 ~~~~~~~~~~~i~~~d~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (114)
T 3luq_A 5 LRLFTEHAPAALAMFDREMR---YLAVSRRWREDYGLGDGDILGMSHYDIF-PEIGEEWKSVHRRGLAGEVIRVEEDCFV 80 (114)
T ss_dssp HHHHHHTCSSEEEEEETTCB---EEEECHHHHHHTTCCSSCCTTCBHHHHC-TTCCHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred HHHHHhcCCceEEEEcCCcE---EEEECHHHHHHHCCCHHHHcCCcHHHHC-CccHHHHHHHHHHHhcCCcceeeeeEEE
Confidence 88999999999999998666 9999999999999999999999987776 5556666555566555433333444788
Q ss_pred ccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCC
Q 002051 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (975)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDIT 587 (975)
+++|..+|+.++..|++|.+|.+.|++++++|||
T Consensus 81 ~~~g~~~~~~~~~~p~~~~~g~~~~~~~~~~DIT 114 (114)
T 3luq_A 81 RADGRTQWLRWEVRPWYEGEGRVGGVVIFTEDIT 114 (114)
T ss_dssp C--CCEEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred cCCCcEEEEEEEEEEeECCCCCEEEEEEEEeeCC
Confidence 9999999999999999999999999999999998
|
| >3mxq_A Sensor protein; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.78A {Vibrio cholerae o1 biovar el tor} | Back alignment and structure |
|---|
Probab=99.51 E-value=2.8e-14 Score=140.28 Aligned_cols=114 Identities=14% Similarity=0.189 Sum_probs=92.6
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEE----
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQ---- 549 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e---- 549 (975)
|+.+++++++||+++|.+|+ |++||+++++++|++++|++|+++..++++ ....+.+.++.++..|......
T Consensus 24 l~~il~~~~~gi~v~D~~g~---I~~~N~a~~~~~G~~~~eviG~~~~~~~p~-~~~~~~~~l~~vl~~G~~~~~~~~~~ 99 (152)
T 3mxq_A 24 LSELLDQLSFALCIVRNDYV---IVKVNEYFESRVIFDGETMQGKNILELFPE-SADYLKRKIDTALVIESSSFSSWEQK 99 (152)
T ss_dssp HHHHHHHHCCEEEEEETTSB---EEEECHHHHHTSSSCHHHHTTSBHHHHSGG-GHHHHHHHHHHHHHHTSCEEEECCSS
T ss_pred HHHHHhcCCCCEEEEcCCCE---EEEECHHHHHHHCcCHHHHCCCCHHHhcCC-hHHHHHHHHHHHHhcCCceeeecccc
Confidence 89999999999999999777 999999999999999999999998888877 5555667788888887653321
Q ss_pred -----EEE---EccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccc
Q 002051 550 -----LIN---YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (975)
Q Consensus 550 -----~~~---~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~ 591 (975)
++. ..++|+.+|..++++|++|++|++.|++++++|||++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~ti~Pl~d~~G~v~gv~~ii~DVTe~~~ 149 (152)
T 3mxq_A 100 PHLLPFKSSRPVSGEEEQMYQNLEVIPIHSEDGTIEHVCLCVYDVTIQAS 149 (152)
T ss_dssp SCSSCC----------CCEEEEEEEEEEECTTSCEEEEEEEEEEEECC--
T ss_pred cccccccccCCCCCCCcEEEEEEEEEEEECCCCCEEEEEEEEEECCHHHh
Confidence 111 235678889999999999999999999999999999976
|
| >2kdk_A ARYL hydrocarbon receptor nuclear translocator-LI 2; circadian clock, PAS domain, transcription, activator, biolo rhythms, DNA-binding, nucleus; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.51 E-value=7.5e-14 Score=130.11 Aligned_cols=114 Identities=13% Similarity=0.108 Sum_probs=98.9
Q ss_pred HHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCC-cEEEEEEEE
Q 002051 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQT-DVTVQLINY 553 (975)
Q Consensus 475 ~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~-~~~~e~~~~ 553 (975)
..++++++++|+++|.+|+ |+|+|+++++++||+++|++|+++..+++|++.....+.+...+..+. ....+++++
T Consensus 6 ~~~~~~~~~~i~~~d~~g~---i~~~N~~~~~~~G~~~~el~g~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~e~r~~ 82 (121)
T 2kdk_A 6 GEINVKPTEFITRFAVNGK---FVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAVLQSKEKILTDSYKFR 82 (121)
T ss_dssp TCCCCCSSEEEEEECTTSB---EEEECTHHHHHTCCCTTTSBTSBTTTTBCSSSHHHHHHHHHHHHTSSSCEEEEEEEEE
T ss_pred cccccCCccEEEEECCCee---EEEEChhHHHHHCCCHHHHcCCcHHHeeCHHHHHHHHHHHHHHHhCCCCCccEEEEEE
Confidence 3467789999999999766 999999999999999999999998888999888777777777776544 467899999
Q ss_pred ccCCcEEEEEEEEeeeecCC-CCEEEEEEEeecCCcccc
Q 002051 554 TKSGKKFWNLFHLQPMRDQK-GEVQYFIGVQLDGSEHLE 591 (975)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~-G~i~~~v~i~rDITerk~ 591 (975)
++||+.+|+++++.|++|.+ |.+.+++++.+|||+.++
T Consensus 83 ~~dG~~~~~~~~~~~~~d~~~~~~~~~v~~~~~i~~~~~ 121 (121)
T 2kdk_A 83 AKDGSFVTLKSQWFSFTNPDTKELEYIVSVNTLVLGHSE 121 (121)
T ss_dssp CSSSCEEEEEEEEEEEECCSSSCEEEEEEEEECCSSCCC
T ss_pred EcCCCEEEEEEEEEEEECCCCCeeeEEEEEEEeccccCC
Confidence 99999999999999999975 567889999999999753
|
| >3kx0_X Uncharacterized protein RV1364C/MT1410; PAS domain, sensory domain, mycobacteium tuberculos molecule binding domain; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.50 E-value=3.7e-14 Score=144.09 Aligned_cols=119 Identities=10% Similarity=0.097 Sum_probs=98.1
Q ss_pred CcHHHHHHhccCcEEEEc-CCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEE
Q 002051 472 IDLATTLERIEKNFVITD-PRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQL 550 (975)
Q Consensus 472 ~~l~~i~e~~~d~i~i~D-~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~ 550 (975)
..|+.++++++++|+++| .+|+ |+++|++|++++||+ +++|+++..++++.........+..++..|.....+.
T Consensus 37 ~~l~~l~~~~~~~i~~~d~~~g~---i~~~N~a~~~l~G~~--~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 111 (185)
T 3kx0_X 37 EDVRRIFEHIPAILVGLEGPDHR---FVAVNAAYRGFSPLL--DTVGQPAREVYPELEGQQIYEMLDRVYQTGEPQSGSE 111 (185)
T ss_dssp HHHHHHHHHCSSEEEEEETTTTE---EEEECHHHHHHCCCC--SCTTSBHHHHCTTSCSSSSHHHHHHHHHHCCCEEEEE
T ss_pred HHHHHHHhcCCceEEEEECCCcE---EEEEcHHHHHHcCCc--cccCCcHHHHCCchhhhhHHHHHHHHHHcCCcccccc
Confidence 449999999999999999 8666 999999999999999 9999998888887766666677788887888765543
Q ss_pred EEE---ccC--CcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccccccC
Q 002051 551 INY---TKS--GKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRN 595 (975)
Q Consensus 551 ~~~---~kd--G~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~e~~ 595 (975)
... +++ |..+|+.+++.|++|.+|.+.|++++++|||++|+++++
T Consensus 112 ~~~~~~~~~~gg~~~~~~~~~~pi~~~~g~~~g~~~~~~DITerk~~e~~ 161 (185)
T 3kx0_X 112 WRLQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVRARQA 161 (185)
T ss_dssp EEEC--------CCEEEEEEEEEEECTTSCEEEEEEEEEECHHHHTTCC-
T ss_pred eeEEeeccCCCCccEEEEEEEEEEECCCCCEEEEEEEEEeCCHHHHHHHH
Confidence 322 222 788999999999999999999999999999999996544
|
| >3eeh_A Putative light and redox sensing histidine kinase; structural genomic MCSG, protein structure initiative, midwest center for STRU genomics; HET: PG5; 1.95A {Haloarcula marismortui} | Back alignment and structure |
|---|
Probab=99.48 E-value=6.3e-14 Score=129.34 Aligned_cols=121 Identities=11% Similarity=0.133 Sum_probs=99.2
Q ss_pred ccccCcchHHHHHHHHHhccCcEEEEeCCCCC-CceEeccHHHHHHhCCChhhhcCCC--CCCCCCCCCCHHHHHHHHHH
Q 002051 180 KEKGLPRVSDIVKDALSTFQQTFVVSDATKPD-YPIMYASAGFFKMTGYTSKEVVGRN--CRFLQGAGTDPEDVAKIRET 256 (975)
Q Consensus 180 ~e~~L~~~~~~l~~ild~~~d~i~i~D~~~~~-G~I~~~N~a~~~l~Gys~eEliG~~--~~~l~~~~~~~~~~~~l~~~ 256 (975)
.+++|+++.+.|+.++++++++++++|. + |+|+++|+++++++||+.++++|+. +..++++++.......+..
T Consensus 2 ~e~~l~~~~~~~~~~~~~~~~~i~~~d~---~~~~i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 77 (125)
T 3eeh_A 2 AKQQAAKSERRVRELTEATNDILWEFTA---DLSEVLVINSAYEDIWGRSVAKLRENPHDFLNGIHPEDRELMKDTMQS- 77 (125)
T ss_dssp --------CHHHHHHHSCCCCEEEEEET---TSSCEEEECTHHHHHHSSCHHHHHHCGGGGGGGBCHHHHHHHHHHHHH-
T ss_pred hHHHHHHHHHHHHHHHhcCCceEEEEEc---CCCcEEEecHHHHHHHCCCHHHHccCcHHHHHhcCHHHHHHHHHHHHH-
Confidence 4677888899999999999999999999 8 9999999999999999999999987 4455565555555455544
Q ss_pred HHcCCcEEEEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccc
Q 002051 257 LQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (975)
Q Consensus 257 l~~g~~~~~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDIT 304 (975)
+..+..+..+++..+++|..+|+.++..|+.+..|.+.+++++++|||
T Consensus 78 ~~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIT 125 (125)
T 3eeh_A 78 LMDGESADVECRVNATEEYQRWVWIQGEPITNDAGETVRVAGFARDIT 125 (125)
T ss_dssp HHTTCCEEEEEEECGGGTTCEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred HHcCCCccEEEEEEcCCCCEEEEEEecEEEECCCCCEEEEEEEEEecC
Confidence 667788888998899999999999999999999999999999999998
|
| >2v0u_A NPH1-1, LOV2; kinase, transferase, ATP-binding, serine/threonine-protein kinase, light-induced signal trans phototropin1, nucleotide-binding; HET: FMN; 1.40A {Avena sativa} PDB: 2v0w_A* 2v1b_A* 2v1a_A* 1jnu_A* 1g28_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=2.2e-13 Score=129.15 Aligned_cols=120 Identities=41% Similarity=0.829 Sum_probs=108.3
Q ss_pred HHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002051 191 VKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNY 270 (975)
Q Consensus 191 l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~ 270 (975)
|+.++++++++++++|..+++|+|+++|+++++++||+.++++|+++..+.++.........+...+..+..+..++...
T Consensus 4 l~~~~~~~~~~i~~~d~~~~~~~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (146)
T 2v0u_A 4 LATTLERIEKNFVITDPRLPDNPIIFASDSFLQLTEYSREEILGRNCRFLQGPETDRATVRKIRDAIDNQTEVTVQLINY 83 (146)
T ss_dssp CCCTGGGSSSCEEEECTTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred HHHHHhcCCCcEEEEcCCCCCceEEEEcHHHHHHHCcCHHHHcCCCHHHhcCCcCChHHHHHHHHHHhcCCCcceEEEEE
Confidence 34578999999999987444688999999999999999999999999888888888888888889999999999999999
Q ss_pred ecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHH
Q 002051 271 KKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGA 310 (975)
Q Consensus 271 ~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e 310 (975)
+++|..+|+.++..|+.+.+|.+.+++++++|||++++.+
T Consensus 84 ~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~~~ 123 (146)
T 2v0u_A 84 TKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVRDA 123 (146)
T ss_dssp CTTCCEEEEEEEEEEEECTTSCEEEEEEEEEEESSCCCHH
T ss_pred ecCCcEEEEEEEEEEeECCCCCEEEEEEEEeechHHHHHH
Confidence 9999999999999999999999999999999999999843
|
| >3icy_A Sensor protein; sensory box histidine kinase/response regulator domain, kinase, chlorobium tepidum TLS, PSI-2; 2.68A {Chlorobaculum tepidum} | Back alignment and structure |
|---|
Probab=99.47 E-value=4e-14 Score=130.59 Aligned_cols=111 Identities=12% Similarity=0.025 Sum_probs=103.1
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCC--CCcCCCCCCHHHHHHHHHHHHcCCcEEEEEE
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNC--RFLQGPETDPATVRKIRAAIDNQTDVTVQLI 551 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~--~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~ 551 (975)
|+.++++++++++.+|.++. ++++|+++++++||++++++|... ..+++|++...+.+.+...+..+..+..+++
T Consensus 6 ~~~l~~~~~~~i~~~d~~~~---~~~~n~~~~~~~G~~~~~~~~~~~~~~~~i~p~d~~~~~~~~~~~~~~~~~~~~e~r 82 (118)
T 3icy_A 6 LQALVDNIPAAIYHLDVSGQ---ATIRFRPPAFLKTLVSEHAGTTRLNTLSMIHHDDRHMLSNAYSKLREAKHSLTLVYR 82 (118)
T ss_dssp HHHHHTTCCCCCEEECTTSC---EEECCCCCGGGGGGEEEETTEEEEGGGGGBCGGGHHHHHHHHHHHHHSCCEEEEEEE
T ss_pred HHHHHhcCCceEEEEEcCCC---ceEEechhHhhcCCCHHHccCChhHHHHHcCHHHHHHHHHHHHHHHhcCCCceEEEE
Confidence 89999999999999999776 999999999999999999988753 5678999888888888888888888999999
Q ss_pred EEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCC
Q 002051 552 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (975)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDIT 587 (975)
++++||+.+|+..+..|+++++|.+.+++|+++|||
T Consensus 83 ~~~~~g~~~w~~~~~~~~~~~~g~~~~~~g~~~DIT 118 (118)
T 3icy_A 83 IVTPEGKLHWIEDHMRSSFSDDGLFSGIDGILCEVT 118 (118)
T ss_dssp EECTTCCEEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred EECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEecC
Confidence 999999999999999999999999999999999998
|
| >2kdk_A ARYL hydrocarbon receptor nuclear translocator-LI 2; circadian clock, PAS domain, transcription, activator, biolo rhythms, DNA-binding, nucleus; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.6e-13 Score=127.88 Aligned_cols=112 Identities=13% Similarity=0.105 Sum_probs=96.5
Q ss_pred HHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcC-CcEEEEEEEEe
Q 002051 193 DALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNG-QSYCGRLLNYK 271 (975)
Q Consensus 193 ~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g-~~~~~e~~~~~ 271 (975)
.++++++++|+++|. +|+|+|+|+++++++||+++|++|+++..++++++.......+...+..+ ..+..+++.++
T Consensus 7 ~~~~~~~~~i~~~d~---~g~i~~~N~~~~~~~G~~~~el~g~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~e~r~~~ 83 (121)
T 2kdk_A 7 EINVKPTEFITRFAV---NGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAVLQSKEKILTDSYKFRA 83 (121)
T ss_dssp CCCCCSSEEEEEECT---TSBEEEECTHHHHHTCCCTTTSBTSBTTTTBCSSSHHHHHHHHHHHHTSSSCEEEEEEEEEC
T ss_pred ccccCCccEEEEECC---CeeEEEEChhHHHHHCCCHHHHcCCcHHHeeCHHHHHHHHHHHHHHHhCCCCCccEEEEEEE
Confidence 356778999999999 99999999999999999999999999888888887777667777777654 44677888999
Q ss_pred cCCCEEEEEEEeeeeecCC-CCEEEEEEEEeccchhh
Q 002051 272 KDGTPFWNLLTIAPIKDDE-GKVLKFIGMQVEVSKHT 307 (975)
Q Consensus 272 kdG~~~w~~~~i~pi~d~~-G~v~~~v~~~rDITerk 307 (975)
+||+.+|++++..|++|.. |.+.+++++.+|||+.+
T Consensus 84 ~dG~~~~~~~~~~~~~d~~~~~~~~~v~~~~~i~~~~ 120 (121)
T 2kdk_A 84 KDGSFVTLKSQWFSFTNPDTKELEYIVSVNTLVLGHS 120 (121)
T ss_dssp SSSCEEEEEEEEEEEECCSSSCEEEEEEEEECCSSCC
T ss_pred cCCCEEEEEEEEEEEECCCCCeeeEEEEEEEeccccC
Confidence 9999999999999999876 56777899999999864
|
| >3olo_A Two-component sensor histidine kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, TRA; 2.09A {Nostoc SP} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.3e-13 Score=126.99 Aligned_cols=114 Identities=11% Similarity=0.098 Sum_probs=92.0
Q ss_pred cccCcchHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcC
Q 002051 181 EKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNG 260 (975)
Q Consensus 181 e~~L~~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g 260 (975)
+.++++..++++.++++++++|+++|. +|+|+++|++|++++||+++|++|+++..+.+...... +..+..+
T Consensus 5 ~~~~e~~~~~~~~~~~~~~~~i~~~d~---~g~i~~~N~~~~~l~G~~~~el~g~~~~~~~~~~~~~~-----~~~~~~~ 76 (118)
T 3olo_A 5 NIQSELEFKFAHYLINNAVEASFCLGD---NWQFLYVNDATCRMTEYSREQLLSMNLQDIDVDFALHD-----WEEIRQK 76 (118)
T ss_dssp --CHHHHHHHHHHHHHHCSSEEEEECT---TSBEEEECHHHHHHHCCCHHHHTTCBGGGTBTTGGGSC-----HHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCceEEEECC---CCcEEEEHHHHHHHHCCCHHHHhCCChhhcccccCHHH-----HHHHHhc
Confidence 344556677889999999999999999 99999999999999999999999999887776543222 2334456
Q ss_pred CcEEEEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccc
Q 002051 261 QSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (975)
Q Consensus 261 ~~~~~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDIT 304 (975)
..+..+...++++|+.+|++++..|+.+.+ ..+++++++|||
T Consensus 77 ~~~~~e~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~DIT 118 (118)
T 3olo_A 77 NNYTFKTRYRSQSGRIFLVEMSLTFLEDQE--RRFSCVFVREKS 118 (118)
T ss_dssp SEEEEEEEEECTTCCEEEEEEEEEEEEETT--EEEEEEEEEEC-
T ss_pred CcEEEEEEEEccCCCEEEEEEEEEEEEECC--ccEEEEEEEeCC
Confidence 677888888999999999999999997643 346789999997
|
| >1byw_A Protein (human ERG potassium channel); PAS domain, potassium channel domain, membrane protein; 2.60A {Homo sapiens} SCOP: d.110.3.6 | Back alignment and structure |
|---|
Probab=99.46 E-value=7.7e-13 Score=118.50 Aligned_cols=107 Identities=29% Similarity=0.579 Sum_probs=95.0
Q ss_pred CcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCC--CCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCCEE
Q 002051 200 QTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRN--CRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPF 277 (975)
Q Consensus 200 d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~--~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~ 277 (975)
++|+++|..+.+|+|+++|++|++++||+.++++|++ ...+.++.........+...+..+..+..+...++++|..+
T Consensus 2 ~~i~i~d~~~~~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 81 (110)
T 1byw_A 2 RKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPCTQRRAAAQIAQALLGAEERKVEIAFYRKDGSCF 81 (110)
T ss_dssp CEEEEEETTSSSCBEEEECHHHHHHHTCCHHHHTTSBTTCGGGCCTTCCHHHHHHHHHHHHTTCCEEEEEEEECTTSCEE
T ss_pred CCEEEEeccCCCCcEEEECHHHHHHhCCCHHHHccCCCccccccCCcCCHHHHHHHHHHHhcCCCceEEEEEEcCCCCEE
Confidence 5899999865579999999999999999999999998 45566666666667788888888888888888889999999
Q ss_pred EEEEEeeeeecCCCCEEEEEEEEeccchh
Q 002051 278 WNLLTIAPIKDDEGKVLKFIGMQVEVSKH 306 (975)
Q Consensus 278 w~~~~i~pi~d~~G~v~~~v~~~rDITer 306 (975)
|+.+++.|+.+.+|.+.+++++++|||++
T Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~DiTe~ 110 (110)
T 1byw_A 82 LCLVDVVPVKNEDGAVIMFILNFEVVMEK 110 (110)
T ss_dssp EEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred EEEEEEEEeecCCCCEEEEEEEEEeccCC
Confidence 99999999999999999999999999975
|
| >3icy_A Sensor protein; sensory box histidine kinase/response regulator domain, kinase, chlorobium tepidum TLS, PSI-2; 2.68A {Chlorobaculum tepidum} | Back alignment and structure |
|---|
Probab=99.46 E-value=8.2e-14 Score=128.46 Aligned_cols=115 Identities=9% Similarity=-0.035 Sum_probs=105.5
Q ss_pred hHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCC--CCCCCCCCCHHHHHHHHHHHHcCCcEE
Q 002051 187 VSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNC--RFLQGAGTDPEDVAKIRETLQNGQSYC 264 (975)
Q Consensus 187 ~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~--~~l~~~~~~~~~~~~l~~~l~~g~~~~ 264 (975)
+++.|+.++++++++++.+|. +|.++++|+++++++||+.++++|... ..++++++.......+...+..+..+.
T Consensus 2 s~~~~~~l~~~~~~~i~~~d~---~~~~~~~n~~~~~~~G~~~~~~~~~~~~~~~~i~p~d~~~~~~~~~~~~~~~~~~~ 78 (118)
T 3icy_A 2 NAEELQALVDNIPAAIYHLDV---SGQATIRFRPPAFLKTLVSEHAGTTRLNTLSMIHHDDRHMLSNAYSKLREAKHSLT 78 (118)
T ss_dssp HHHHHHHHHTTCCCCCEEECT---TSCEEECCCCCGGGGGGEEEETTEEEEGGGGGBCGGGHHHHHHHHHHHHHSCCEEE
T ss_pred cHHHHHHHHhcCCceEEEEEc---CCCceEEechhHhhcCCCHHHccCChhHHHHHcCHHHHHHHHHHHHHHHhcCCCce
Confidence 457899999999999999999 999999999999999999999988764 467788888888888888889999999
Q ss_pred EEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccc
Q 002051 265 GRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (975)
Q Consensus 265 ~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDIT 304 (975)
.+++.++++|+.+|+..+..|+++++|.+.+++|+++|||
T Consensus 79 ~e~r~~~~~g~~~w~~~~~~~~~~~~g~~~~~~g~~~DIT 118 (118)
T 3icy_A 79 LVYRIVTPEGKLHWIEDHMRSSFSDDGLFSGIDGILCEVT 118 (118)
T ss_dssp EEEEEECTTCCEEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred EEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEecC
Confidence 9999999999999999999999999999999999999998
|
| >3olo_A Two-component sensor histidine kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, TRA; 2.09A {Nostoc SP} | Back alignment and structure |
|---|
Probab=99.45 E-value=2.2e-13 Score=125.54 Aligned_cols=104 Identities=17% Similarity=0.180 Sum_probs=85.7
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~ 553 (975)
++.++++++++|+++|.+|+ |+++|+++++++||+++|++|+++..+.++..... ...+..+..+..+.+++
T Consensus 15 ~~~~~~~~~~~i~~~d~~g~---i~~~N~~~~~l~G~~~~el~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~e~~~~ 86 (118)
T 3olo_A 15 AHYLINNAVEASFCLGDNWQ---FLYVNDATCRMTEYSREQLLSMNLQDIDVDFALHD-----WEEIRQKNNYTFKTRYR 86 (118)
T ss_dssp HHHHHHHCSSEEEEECTTSB---EEEECHHHHHHHCCCHHHHTTCBGGGTBTTGGGSC-----HHHHHHHSEEEEEEEEE
T ss_pred HHHHHhcCCceEEEECCCCc---EEEEHHHHHHHHCCCHHHHhCCChhhcccccCHHH-----HHHHHhcCcEEEEEEEE
Confidence 78899999999999999766 99999999999999999999999877765433222 23334456778899999
Q ss_pred ccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCC
Q 002051 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (975)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDIT 587 (975)
++||+.+|+.++..|+.+.+ ..+++++++|||
T Consensus 87 ~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~DIT 118 (118)
T 3olo_A 87 SQSGRIFLVEMSLTFLEDQE--RRFSCVFVREKS 118 (118)
T ss_dssp CTTCCEEEEEEEEEEEEETT--EEEEEEEEEEC-
T ss_pred ccCCCEEEEEEEEEEEEECC--ccEEEEEEEeCC
Confidence 99999999999999998743 346789999998
|
| >3eeh_A Putative light and redox sensing histidine kinase; structural genomic MCSG, protein structure initiative, midwest center for STRU genomics; HET: PG5; 1.95A {Haloarcula marismortui} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.4e-13 Score=126.96 Aligned_cols=112 Identities=10% Similarity=0.085 Sum_probs=98.5
Q ss_pred CcHHHHHHhccCcEEEEcCC-CCCCCeeecCHHHHHHcCCChhhhcCCC--CCCcCCCCCCHHHHHHHHHHHHcCCcEEE
Q 002051 472 IDLATTLERIEKNFVITDPR-LPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAAIDNQTDVTV 548 (975)
Q Consensus 472 ~~l~~i~e~~~d~i~i~D~~-g~dg~I~~vN~a~~~l~Gy~~eEllG~~--~~~l~~~~~~~~~~~~~~~~l~~g~~~~~ 548 (975)
..|+.++++++++++++|.+ |. ++++|+++++++||+.++++|.+ +..+++|++.......+.. +..+..+..
T Consensus 11 ~~~~~~~~~~~~~i~~~d~~~~~---i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 86 (125)
T 3eeh_A 11 RRVRELTEATNDILWEFTADLSE---VLVINSAYEDIWGRSVAKLRENPHDFLNGIHPEDRELMKDTMQS-LMDGESADV 86 (125)
T ss_dssp HHHHHHHSCCCCEEEEEETTSSC---EEEECTHHHHHHSSCHHHHHHCGGGGGGGBCHHHHHHHHHHHHH-HHTTCCEEE
T ss_pred HHHHHHHhcCCceEEEEEcCCCc---EEEecHHHHHHHCCCHHHHccCcHHHHHhcCHHHHHHHHHHHHH-HHcCCCccE
Confidence 44899999999999999997 66 99999999999999999999987 4556677766666555555 667788889
Q ss_pred EEEEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCC
Q 002051 549 QLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (975)
Q Consensus 549 e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDIT 587 (975)
+++..+++|+.+|+.++..|+.+.+|.+.+++++++|||
T Consensus 87 e~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIT 125 (125)
T 3eeh_A 87 ECRVNATEEYQRWVWIQGEPITNDAGETVRVAGFARDIT 125 (125)
T ss_dssp EEEECGGGTTCEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred EEEEEcCCCCEEEEEEecEEEECCCCCEEEEEEEEEecC
Confidence 999999999999999999999999999999999999998
|
| >1byw_A Protein (human ERG potassium channel); PAS domain, potassium channel domain, membrane protein; 2.60A {Homo sapiens} SCOP: d.110.3.6 | Back alignment and structure |
|---|
Probab=99.45 E-value=1.1e-12 Score=117.48 Aligned_cols=107 Identities=31% Similarity=0.551 Sum_probs=93.8
Q ss_pred CcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCC--CCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEccCCcEE
Q 002051 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKF 560 (975)
Q Consensus 483 d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~--~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~~kdG~~~ 560 (975)
++|+++|....+|.|+++|+++++++||+.++++|++ ...+.+++........+...+..+..+..++...+++|+.+
T Consensus 2 ~~i~i~d~~~~~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 81 (110)
T 1byw_A 2 RKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPCTQRRAAAQIAQALLGAEERKVEIAFYRKDGSCF 81 (110)
T ss_dssp CEEEEEETTSSSCBEEEECHHHHHHHTCCHHHHTTSBTTCGGGCCTTCCHHHHHHHHHHHHTTCCEEEEEEEECTTSCEE
T ss_pred CCEEEEeccCCCCcEEEECHHHHHHhCCCHHHHccCCCccccccCCcCCHHHHHHHHHHHhcCCCceEEEEEEcCCCCEE
Confidence 5889999753345599999999999999999999998 55566666677677788888888888999999999999999
Q ss_pred EEEEEEeeeecCCCCEEEEEEEeecCCcc
Q 002051 561 WNLFHLQPMRDQKGEVQYFIGVQLDGSEH 589 (975)
Q Consensus 561 wv~~~~~pi~d~~G~i~~~v~i~rDITer 589 (975)
|+.+++.|+.+.+|.+.+++++++|||+|
T Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~DiTe~ 110 (110)
T 1byw_A 82 LCLVDVVPVKNEDGAVIMFILNFEVVMEK 110 (110)
T ss_dssp EEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred EEEEEEEEeecCCCCEEEEEEEEEeccCC
Confidence 99999999999999999999999999986
|
| >4dj2_A Period circadian protein homolog 1; PAS domains, circadian clock protein, protein binding; 2.75A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.45 E-value=6.9e-13 Score=145.95 Aligned_cols=108 Identities=11% Similarity=0.098 Sum_probs=92.2
Q ss_pred cCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcC-CcE-EEEEEEEccCCcE
Q 002051 482 EKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQ-TDV-TVQLINYTKSGKK 559 (975)
Q Consensus 482 ~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g-~~~-~~e~~~~~kdG~~ 559 (975)
...+...+.+|+ |+|+|+++..++||.++|++|+++..++||++.....+.+.+.+..+ ... ..+++++++||+.
T Consensus 176 ~~Fitrh~~dG~---~~yvd~~~~~lLGY~peELig~s~~~~vHPdD~~~~~~~~~~~l~~~g~~~~~~~yR~~~kdG~~ 252 (320)
T 4dj2_A 176 RIFTTRHTPSCL---FQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPFDHSPIRFCARNGEY 252 (320)
T ss_dssp CEEEEEECTTCB---EEEECTTHHHHHSCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHTTSSSCCEECCCEEEECSSSCE
T ss_pred ceEEEEecCCce---EEEcCcceeccCCcChHHHcCCcHHHhCCHHHHHHHHHHHHHHHhcCCCcccceEEEEEccCCCE
Confidence 345666677555 99999999999999999999999999999999888888888877744 445 3689999999999
Q ss_pred EEEEEEEeeeecC-CCCEEEEEEEeecCCccccc
Q 002051 560 FWNLFHLQPMRDQ-KGEVQYFIGVQLDGSEHLEP 592 (975)
Q Consensus 560 ~wv~~~~~pi~d~-~G~i~~~v~i~rDITerk~~ 592 (975)
+|++.++++++|. .+++.+++|..+-|+....+
T Consensus 253 vwvet~~~~~~np~s~~~e~II~~h~v~~gp~~~ 286 (320)
T 4dj2_A 253 VTMDTSWAGFVHPWSRKVAFVLGRHKVRTAPLNE 286 (320)
T ss_dssp EEEECEEEEEECTTTCSEEEEEEEEEESSCCSSC
T ss_pred EEEEEEEEEEECCCCCCccEEEEEEEEccCCCCC
Confidence 9999999999985 67889999999999987664
|
| >2l0w_A Potassium voltage-gated channel, subfamily H (EAG member 2, isoform CRA_B; HERG, PAS domain, voltage-gated potassium channel, membrane; NMR {Homo sapiens} PDB: 2l1m_A 2l4r_A | Back alignment and structure |
|---|
Probab=99.44 E-value=1.8e-12 Score=121.64 Aligned_cols=119 Identities=27% Similarity=0.526 Sum_probs=102.9
Q ss_pred HHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCC--CCCCCCCCCCHHHHHHHHHHHHcCCcEEE
Q 002051 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRN--CRFLQGAGTDPEDVAKIRETLQNGQSYCG 265 (975)
Q Consensus 188 ~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~--~~~l~~~~~~~~~~~~l~~~l~~g~~~~~ 265 (975)
.+.+...++.++++|+++|...++|+|+++|++|++++||+.++++|++ +..+.++.........+...+..+..+..
T Consensus 18 l~~~~~~~~~~~~~i~~~d~~~~~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (138)
T 2l0w_A 18 LDTIIRKFEGQSRKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPRTQRRAAAQIAQALLGAEERKV 97 (138)
T ss_dssp HHHHHHHHTTTTSEEEEEESSSTTCBEEEECSHHHHHHSCCHHHHTTSBTTCGGGCCTTCCHHHHHHHHHHTTCSSCEEE
T ss_pred HHHHHHHHhcCCCCEEEEecCCCCCEEEEeCHHHHHHhCCCHHHHcCCCCcccccCCcccchhHHHHHHHHHhhcCCcee
Confidence 3445566777999999999744468899999999999999999999998 45667777777777788888888888888
Q ss_pred EEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchh
Q 002051 266 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKH 306 (975)
Q Consensus 266 e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITer 306 (975)
+...++++|..+|+.+++.|+.+.+|.+.+++++++|||++
T Consensus 98 ~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~ 138 (138)
T 2l0w_A 98 EIAFYRKDGSCFLCLVDVVPVKNEDGAVIMFILNFEVVMEK 138 (138)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEC
T ss_pred EEEEECCCCCEEEEEEEEEEEeCCCCCEEEEEEEEEeccCC
Confidence 88888999999999999999999999999999999999975
|
| >1v9y_A Heme PAS sensor protein; signaling protein; HET: HEM; 1.32A {Escherichia coli} SCOP: d.110.3.2 PDB: 1v9z_A* 1vb6_A* 1s67_L* 1s66_L* | Back alignment and structure |
|---|
Probab=99.44 E-value=2.1e-13 Score=133.98 Aligned_cols=138 Identities=20% Similarity=0.281 Sum_probs=88.7
Q ss_pred ccccccccccccCcchHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHH
Q 002051 172 GEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVA 251 (975)
Q Consensus 172 ~di~~~~~~e~~L~~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~ 251 (975)
.+++..+...+.+......|+.+++.++++++++|. +|+|+++|++|+.++||+.++++|+++..++++........
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~d~---~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~ 99 (167)
T 1v9y_A 23 QDAEVIMKLTDADNAADGIFFPALEQNMMGAVLINE---NDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPE 99 (167)
T ss_dssp -----------------CCHHHHHHTCSSEEEEECT---TSBEEEECHHHHHHHSCCGGGTTTSBGGGGSCGGGTTTHHH
T ss_pred hhHHHHHHHHHHHhhhhHHHHHHHHhCCCCEEEECC---CCcEEEECHHHHHHhCCCHHHHcCCChhhccCccccchHHH
Confidence 466667777888888888999999999999999999 99999999999999999999999999888877766555555
Q ss_pred HHHHHHHcCCc----EEEEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHhhh
Q 002051 252 KIRETLQNGQS----YCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (975)
Q Consensus 252 ~l~~~l~~g~~----~~~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~ 314 (975)
.+......+.. +..+....+++|..+|+.+++.|+ +.+|.+ +++++++|||++++++++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~g~~-~~~~~~~DiT~~~~~e~~l~ 164 (167)
T 1v9y_A 100 YIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKV-YYLALVRDASVEMAQKEQTR 164 (167)
T ss_dssp HHHHHHC----------CEEEEECTTSCEEEEEEEEEEE-EETTEE-EEEEEEEC------------
T ss_pred HHHHHhhcCCCcccccceEEEEEcCCCcEEEEEEEEEEE-ecCCCE-EEEEEEecCcHHHHHHHHHH
Confidence 55555554433 455777789999999999999999 455665 48999999999999998865
|
| >3gdi_A Period circadian protein homolog 2; tandem PAS domains, biological rhythms, cytoplasm, nucleus, phosphoprotein, transcription; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.3e-12 Score=143.09 Aligned_cols=107 Identities=9% Similarity=0.087 Sum_probs=91.3
Q ss_pred CcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCc-EE-EEEEEEccCCcEE
Q 002051 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD-VT-VQLINYTKSGKKF 560 (975)
Q Consensus 483 d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~-~~-~e~~~~~kdG~~~ 560 (975)
..+...+.+|+ |+|+|+++..++||.++|++|+++..++||++.....+.+.+.+..++. .. .++++++|||+.+
T Consensus 166 ~Fitrh~~dG~---~~yvd~~~~~lLGY~peELig~s~~~~iHpdD~~~~~~~~~~~l~~~g~~~~~~~yR~~~kdG~~v 242 (309)
T 3gdi_A 166 IFTTTHTPNCL---FQAVDERAVPLLGYLPQDLIETPVLVQLHPSDRPLMLAIHKKILQAGGQPFDYSPIRFRTRNGEYI 242 (309)
T ss_dssp EEEEEECTTCB---EEEECTTHHHHHSCCHHHHTTSBHHHHBCTTSHHHHHHHHHHHHHTTTCCEEEEEEEEECTTSCEE
T ss_pred eEEEEecCCCe---EEEECcccccccCcCHHHHcCCCHHHhCCHHHHHHHHHHHHHHHhcCCceeeceEEEEEccCCCEE
Confidence 35566677555 9999999999999999999999999999999988888888888876554 55 5899999999999
Q ss_pred EEEEEEeeeecC-CCCEEEEEEEeecCCccccc
Q 002051 561 WNLFHLQPMRDQ-KGEVQYFIGVQLDGSEHLEP 592 (975)
Q Consensus 561 wv~~~~~pi~d~-~G~i~~~v~i~rDITerk~~ 592 (975)
|++.+.++++|. .+++.+++|..+-|+....+
T Consensus 243 wvet~~~~~~np~s~~~e~ii~~h~v~~gp~~~ 275 (309)
T 3gdi_A 243 TLDTSWSSFINPWSRKISFIIGRHKVRVGPLNE 275 (309)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEEEEEEECCSSS
T ss_pred EEEEEEEEEECCCCCcccEEEEEEEEccCCCCC
Confidence 999999999985 67888999999988886554
|
| >3d72_A Vivid PAS protein VVD; circadian, photoreceptor, blue-light, LOV, signaling protein; HET: FAD; 1.65A {Neurospora crassa} PDB: 3is2_A* 2pd8_A* 3hjk_A* 2pdr_A* 2pd7_A* 2pdt_A* 3hji_A* 3rh8_B* | Back alignment and structure |
|---|
Probab=99.43 E-value=4e-13 Score=130.15 Aligned_cols=126 Identities=32% Similarity=0.590 Sum_probs=104.6
Q ss_pred cceeccccccccccccCcchHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCC--
Q 002051 168 VRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGT-- 245 (975)
Q Consensus 168 ~~~~~di~~~~~~e~~L~~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~-- 245 (975)
++...+++.++..+..+ .++++. ++|+++|..+.+|+|+++|++|++++||+.+|++|+++..+.+++.
T Consensus 13 ~~~~~~~~~r~~~~~~~--------~~~~~~-~~i~~~d~~d~~g~i~~~N~a~~~l~G~~~~el~g~~~~~l~~~~~~~ 83 (149)
T 3d72_A 13 MGYLIQIMNRPNPQVEL--------GPVDTS-VALILCDLKQKDTPIVYASEAFLYMTGYSNAEVLGRNCRFLQSPDGMV 83 (149)
T ss_dssp HHHHHHHHHCSSCSSCC--------CSCCTT-SCEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGGSTTSCC
T ss_pred eeeeehhhhCcchhHHH--------HhhcCC-ccEEEEeccCCCCcEEEECHHHHHHHCcCHHHHcCCChhHhCCccccc
Confidence 34446676665444322 345664 9999999444499999999999999999999999999888877764
Q ss_pred ---------CHHHHHHHHHHHHcCCcEEEEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEec
Q 002051 246 ---------DPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVE 302 (975)
Q Consensus 246 ---------~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rD 302 (975)
.......+...+..+..+..++..+++||+.+|+.+++.|+++.+|++.+++++++|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~i~~~~g~~~~~v~~~~D 149 (149)
T 3d72_A 84 KPKSTRKYVDSNTINTMRKAIDRNAEVQVEVVNFKKNGQRFVNFLTMIPVRDETGEYRYSMGFQCE 149 (149)
T ss_dssp CTTCCCSSSCHHHHHHHHHHHHHTCCEEEEEEEECTTCCEEEEEEEEEEEECTTSSEEEEEEECCC
T ss_pred cccccccccChHHHHHHHHHHHCCCceEEEEEEECCCCCEEEEEEEEEEEEcCCCCEEEEEEEEeC
Confidence 677778888888899999999999999999999999999999999999999999887
|
| >3mjq_A Uncharacterized protein; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium; 2.60A {Desulfitobacterium hafniense} | Back alignment and structure |
|---|
Probab=99.42 E-value=2.3e-13 Score=126.77 Aligned_cols=116 Identities=12% Similarity=0.115 Sum_probs=91.9
Q ss_pred HHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEc
Q 002051 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYT 554 (975)
Q Consensus 475 ~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~~ 554 (975)
+.++++++++|+++|.+|+ |+++|+++++++||+.++++|+++..++++++.......+...+..+.. ..++...+
T Consensus 2 ~~l~~~~~~~i~~~d~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 77 (126)
T 3mjq_A 2 KNFLETIEDMILIINREGR---LLYANTAVPKKLGYTHEELMSMHILTITSAGKMAEGEKILAELFAGKKE-SLPLSLEK 77 (126)
T ss_dssp CTTGGGCSSEEEEEETTSB---EEEECTHHHHHHSCCHHHHHHSBHHHHHCTTCHHHHHHHHHHHHHTCCS-EEEEEEEC
T ss_pred hhHHhhCCceEEEEeCCCc---EEEEcHHHHHHHCCCHHHHcCCCHHHHcCchhHHHHHHHHHHHHhCCCc-eeEEEEEc
Confidence 4578999999999999766 9999999999999999999999988888887777666777777666655 77888899
Q ss_pred cCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccccccCC
Q 002051 555 KSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNS 596 (975)
Q Consensus 555 kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~e~~~ 596 (975)
++|..+|+.++..|+.+ +...+++++++|||++|+++++.
T Consensus 78 ~~g~~~~~~~~~~~~~~--~~~~~~~~~~~DITe~k~a~~~~ 117 (126)
T 3mjq_A 78 KEGTSIPAKARIWQGKW--HNEPCLFAIIKDLSKEERASSPP 117 (126)
T ss_dssp TTSCEEEEEEEEEEEES--SSSEEEEEEEEECC---------
T ss_pred cCCCEEEEEEEEEeeeE--CCceEEEEEEEechHHHHhhccc
Confidence 99999999999998765 33578999999999999855443
|
| >3mjq_A Uncharacterized protein; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium; 2.60A {Desulfitobacterium hafniense} | Back alignment and structure |
|---|
Probab=99.42 E-value=2.3e-13 Score=126.88 Aligned_cols=118 Identities=20% Similarity=0.209 Sum_probs=91.0
Q ss_pred HHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEe
Q 002051 192 KDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYK 271 (975)
Q Consensus 192 ~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~ 271 (975)
+.++++++++|+++|. +|+|+++|+++++++||+.++++|+++..++++.........+...+..+.. ..++...+
T Consensus 2 ~~l~~~~~~~i~~~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 77 (126)
T 3mjq_A 2 KNFLETIEDMILIINR---EGRLLYANTAVPKKLGYTHEELMSMHILTITSAGKMAEGEKILAELFAGKKE-SLPLSLEK 77 (126)
T ss_dssp CTTGGGCSSEEEEEET---TSBEEEECTHHHHHHSCCHHHHHHSBHHHHHCTTCHHHHHHHHHHHHHTCCS-EEEEEEEC
T ss_pred hhHHhhCCceEEEEeC---CCcEEEEcHHHHHHHCCCHHHHcCCCHHHHcCchhHHHHHHHHHHHHhCCCc-eeEEEEEc
Confidence 4578999999999999 9999999999999999999999999988777777666666666666666655 67788889
Q ss_pred cCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHhhhc
Q 002051 272 KDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (975)
Q Consensus 272 kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~~ 315 (975)
++|..+|+.++..|+.+ +...+++++++|||++|++++++..
T Consensus 78 ~~g~~~~~~~~~~~~~~--~~~~~~~~~~~DITe~k~a~~~~~~ 119 (126)
T 3mjq_A 78 KEGTSIPAKARIWQGKW--HNEPCLFAIIKDLSKEERASSPPFL 119 (126)
T ss_dssp TTSCEEEEEEEEEEEES--SSSEEEEEEEEECC-----------
T ss_pred cCCCEEEEEEEEEeeeE--CCceEEEEEEEechHHHHhhcccch
Confidence 99999999999988765 3456889999999999999988653
|
| >3mfx_A Sensory BOX/ggdef family protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=99.41 E-value=4.9e-13 Score=127.73 Aligned_cols=112 Identities=10% Similarity=0.055 Sum_probs=86.2
Q ss_pred HHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCC------
Q 002051 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ------ 261 (975)
Q Consensus 188 ~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~------ 261 (975)
.+.+++++++++++|+++|. +|+|+++|++|++++||+++|++|+++..++++.........+......+.
T Consensus 6 ~~~l~~i~~~~~d~i~~~D~---~g~I~~~N~aa~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (129)
T 3mfx_A 6 LETIELFIQHLTEAMILVNA---NGFIRSCNQRSAELLDCPQVSLKGQDWRNFLTEHHQARYDNLLSHDVQLGTNCGQPV 82 (129)
T ss_dssp HHHHHHHHTTCSSEEEEEET---TSBEEEECHHHHHHTTSCHHHHTTSBGGGGBCTTCCGGGGCTTC----------CCS
T ss_pred HHHHHHHHhcCCceEEEECC---CCEEEeEhHHHHHHHCcCHHHHcCCcHHHHcChHhHHHHHHHHHHHHhcCccccccc
Confidence 46789999999999999999 999999999999999999999999999888887765533222222222221
Q ss_pred -cEEEEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccch
Q 002051 262 -SYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSK 305 (975)
Q Consensus 262 -~~~~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITe 305 (975)
.+..++..+++||+.+|++++++|+. +|+. .++++++|+..
T Consensus 83 ~~~~~E~~~~rkdG~~~~velsis~i~--~~~~-~~v~~~~~~~~ 124 (129)
T 3mfx_A 83 QHPAQETTLICASGKAKDVELSISYIP--GHEP-MFVMVMHDLEH 124 (129)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEEEEC--SSSC-EEEEEEEEC--
T ss_pred CCCceEEEEEcCCCCEEEEEEEEEEec--CCCc-EEEEEEechhh
Confidence 24578888999999999999999997 3333 37899999853
|
| >3d72_A Vivid PAS protein VVD; circadian, photoreceptor, blue-light, LOV, signaling protein; HET: FAD; 1.65A {Neurospora crassa} PDB: 3is2_A* 2pd8_A* 3hjk_A* 2pdr_A* 2pd7_A* 2pdt_A* 3hji_A* 3rh8_B* | Back alignment and structure |
|---|
Probab=99.40 E-value=1.1e-12 Score=127.01 Aligned_cols=108 Identities=39% Similarity=0.784 Sum_probs=96.0
Q ss_pred HHHHHHhccCcEEEEc---CCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCC-----------CHHHHHHHHHH
Q 002051 474 LATTLERIEKNFVITD---PRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPET-----------DPATVRKIRAA 539 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D---~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~-----------~~~~~~~~~~~ 539 (975)
+..++++. ++|+++| .+|+ |+++|+++++++||+++|++|+++..+.+++. .......+...
T Consensus 28 ~~~~~~~~-~~i~~~d~~d~~g~---i~~~N~a~~~l~G~~~~el~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (149)
T 3d72_A 28 ELGPVDTS-VALILCDLKQKDTP---IVYASEAFLYMTGYSNAEVLGRNCRFLQSPDGMVKPKSTRKYVDSNTINTMRKA 103 (149)
T ss_dssp CCCSCCTT-SCEEEEETTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGGSTTSCCCTTCCCSSSCHHHHHHHHHH
T ss_pred HHHhhcCC-ccEEEEeccCCCCc---EEEECHHHHHHHCcCHHHHcCCChhHhCCccccccccccccccChHHHHHHHHH
Confidence 44566775 9999999 6566 99999999999999999999999888887774 67777788888
Q ss_pred HHcCCcEEEEEEEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeec
Q 002051 540 IDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLD 585 (975)
Q Consensus 540 l~~g~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rD 585 (975)
+..+..+..++..+++||+.+|+.++++|++|.+|++.+++++++|
T Consensus 104 ~~~~~~~~~e~~~~~~dG~~~~~~~~~~~i~~~~g~~~~~v~~~~D 149 (149)
T 3d72_A 104 IDRNAEVQVEVVNFKKNGQRFVNFLTMIPVRDETGEYRYSMGFQCE 149 (149)
T ss_dssp HHHTCCEEEEEEEECTTCCEEEEEEEEEEEECTTSSEEEEEEECCC
T ss_pred HHCCCceEEEEEEECCCCCEEEEEEEEEEEEcCCCCEEEEEEEEeC
Confidence 8888899999999999999999999999999999999999999987
|
| >1v9y_A Heme PAS sensor protein; signaling protein; HET: HEM; 1.32A {Escherichia coli} SCOP: d.110.3.2 PDB: 1v9z_A* 1vb6_A* 1s67_L* 1s66_L* | Back alignment and structure |
|---|
Probab=99.40 E-value=6.5e-13 Score=130.38 Aligned_cols=135 Identities=21% Similarity=0.288 Sum_probs=87.6
Q ss_pred CCchhhHHHHHHHhhc-CcHHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHH
Q 002051 456 PDSVDDKVRQKEMRKG-IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVR 534 (975)
Q Consensus 456 ~d~~er~~~~~~l~~~-~~l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~ 534 (975)
+++.+.+...+.++.. ..|+.++++++++++++|.+|. |+++|+++++++||+.++++|+++..+++++.......
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~d~~g~---i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~ 99 (167)
T 1v9y_A 23 QDAEVIMKLTDADNAADGIFFPALEQNMMGAVLINENDE---VMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPE 99 (167)
T ss_dssp -----------------CCHHHHHHTCSSEEEEECTTSB---EEEECHHHHHHHSCCGGGTTTSBGGGGSCGGGTTTHHH
T ss_pred hhHHHHHHHHHHHhhhhHHHHHHHHhCCCCEEEECCCCc---EEEECHHHHHHhCCCHHHHcCCChhhccCccccchHHH
Confidence 4444544444444443 5699999999999999999766 99999999999999999999999888877766555555
Q ss_pred HHHHHHHcCCc----EEEEEEEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccccccC
Q 002051 535 KIRAAIDNQTD----VTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRN 595 (975)
Q Consensus 535 ~~~~~l~~g~~----~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~e~~ 595 (975)
.+......+.. +..++...+++|..+|+.++..|+ +.+|.+ +++++++|||++|+.+++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~g~~-~~~~~~~DiT~~~~~e~~ 162 (167)
T 1v9y_A 100 YIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKV-YYLALVRDASVEMAQKEQ 162 (167)
T ss_dssp HHHHHHC----------CEEEEECTTSCEEEEEEEEEEE-EETTEE-EEEEEEEC----------
T ss_pred HHHHHhhcCCCcccccceEEEEEcCCCcEEEEEEEEEEE-ecCCCE-EEEEEEecCcHHHHHHHH
Confidence 55555544433 456788889999999999999999 456665 499999999999985543
|
| >2l0w_A Potassium voltage-gated channel, subfamily H (EAG member 2, isoform CRA_B; HERG, PAS domain, voltage-gated potassium channel, membrane; NMR {Homo sapiens} PDB: 2l1m_A 2l4r_A | Back alignment and structure |
|---|
Probab=99.40 E-value=2.3e-12 Score=120.95 Aligned_cols=113 Identities=29% Similarity=0.523 Sum_probs=100.5
Q ss_pred HHHHHHhccCcEEEEcC---CCCCCCeeecCHHHHHHcCCChhhhcCCC--CCCcCCCCCCHHHHHHHHHHHHcCCcEEE
Q 002051 474 LATTLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAAIDNQTDVTV 548 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~---~g~dg~I~~vN~a~~~l~Gy~~eEllG~~--~~~l~~~~~~~~~~~~~~~~l~~g~~~~~ 548 (975)
+...+++++++++++|. +|+ |+++|+++++++||+.++++|++ ...+.+++........+...+..+..+..
T Consensus 21 ~~~~~~~~~~~i~~~d~~~~~g~---i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (138)
T 2l0w_A 21 IIRKFEGQSRKFIIANARVENCA---VIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPRTQRRAAAQIAQALLGAEERKV 97 (138)
T ss_dssp HHHHHTTTTSEEEEEESSSTTCB---EEEECSHHHHHHSCCHHHHTTSBTTCGGGCCTTCCHHHHHHHHHHTTCSSCEEE
T ss_pred HHHHHhcCCCCEEEEecCCCCCE---EEEeCHHHHHHhCCCHHHHcCCCCcccccCCcccchhHHHHHHHHHhhcCCcee
Confidence 44556679999999998 777 99999999999999999999998 56677777777777778888888888889
Q ss_pred EEEEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcc
Q 002051 549 QLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEH 589 (975)
Q Consensus 549 e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITer 589 (975)
++...+++|+.+|+.+++.|+.+.+|.+.+++++++|||++
T Consensus 98 ~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~ 138 (138)
T 2l0w_A 98 EIAFYRKDGSCFLCLVDVVPVKNEDGAVIMFILNFEVVMEK 138 (138)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEC
T ss_pred EEEEECCCCCEEEEEEEEEEEeCCCCCEEEEEEEEEeccCC
Confidence 99999999999999999999999999999999999999985
|
| >3vol_A Aerotaxis transducer AER2; heme, oxygen sensor protein, PAS, HAMP, cyanoMet, CN-bound, protein; HET: HEM; 2.40A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.39 E-value=2e-12 Score=136.81 Aligned_cols=117 Identities=15% Similarity=0.235 Sum_probs=94.8
Q ss_pred cchHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHh------------CCChhhhcCCCCCCCCCCCCCHHHHHH
Q 002051 185 PRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMT------------GYTSKEVVGRNCRFLQGAGTDPEDVAK 252 (975)
Q Consensus 185 ~~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~------------Gys~eEliG~~~~~l~~~~~~~~~~~~ 252 (975)
......+++++++++++|+++|. +|+|+|+|++|++++ ||++++++|+++..+++. ......
T Consensus 18 ~~e~~~l~~iLd~~~~~vii~D~---~g~I~~~N~a~~~ll~~~~~~~~~~l~G~~~~eliG~~~~~~~~~---~~~~~~ 91 (233)
T 3vol_A 18 GSHMARIKSALDNVSANVMIADN---DLNIIYMNRTVSEMLGRAEADIRKQLPNFDAGRLMGANIDVFHKN---PAHQRH 91 (233)
T ss_dssp CTHHHHHHHHHTTSSSEEEEEET---TSBEEEECHHHHHHHHHTHHHHHTTCTTCCTTSCTTCBGGGGSSS---HHHHHH
T ss_pred HHHHHHHHHHHhcCCCcEEEECC---CCcEEEecHHHHHHHHHHHHHHHhhcCCCCHHHHcCCCHHHHcCC---HHHHHH
Confidence 34457789999999999999999 999999999999999 899999999998877653 334444
Q ss_pred HHHHHHcCCcEEEEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHhhh
Q 002051 253 IRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (975)
Q Consensus 253 l~~~l~~g~~~~~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~ 314 (975)
++..+. ..+..++ +.+|. |+.++++|++|++|++.|++++++|||+++++|++++
T Consensus 92 ~~~~~~--~~~~~~~---~~~g~--~~~~~~~Pi~d~~G~~~g~v~~~~DITe~~~~e~ei~ 146 (233)
T 3vol_A 92 LLANLT--GVHKAEL---NLGGR--RFSLDVVPVFNDANERLGSAVQWTDRTEEHRAEQEVS 146 (233)
T ss_dssp HHHTCC--SCEEEEE---EETTE--EEEEEEEEEECTTCCEEEEEEEEEECHHHHHHHHHHH
T ss_pred HHHhcc--cceeEEE---EECCE--EEEEEEEEEECCCCCEEEEEEEEehhhHHHHHHHHHH
Confidence 444432 2344444 34564 7799999999999999999999999999999998855
|
| >3mfx_A Sensory BOX/ggdef family protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.7e-12 Score=123.92 Aligned_cols=109 Identities=11% Similarity=0.085 Sum_probs=84.1
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcC-------CcE
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQ-------TDV 546 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g-------~~~ 546 (975)
++.++++++++|+++|.+|+ |+++|+++++++||+++|++|+++..++++++.......+......+ ..+
T Consensus 9 l~~i~~~~~d~i~~~D~~g~---I~~~N~aa~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (129)
T 3mfx_A 9 IELFIQHLTEAMILVNANGF---IRSCNQRSAELLDCPQVSLKGQDWRNFLTEHHQARYDNLLSHDVQLGTNCGQPVQHP 85 (129)
T ss_dssp HHHHHTTCSSEEEEEETTSB---EEEECHHHHHHTTSCHHHHTTSBGGGGBCTTCCGGGGCTTC----------CCSCEE
T ss_pred HHHHHhcCCceEEEECCCCE---EEeEhHHHHHHHCcCHHHHcCCcHHHHcChHhHHHHHHHHHHHHhcCcccccccCCC
Confidence 89999999999999999776 99999999999999999999999988888876554322222222111 124
Q ss_pred EEEEEEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCc
Q 002051 547 TVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSE 588 (975)
Q Consensus 547 ~~e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITe 588 (975)
..|++.+++||+.+|++++++|+.++ +. .|+++++|+..
T Consensus 86 ~~E~~~~rkdG~~~~velsis~i~~~--~~-~~v~~~~~~~~ 124 (129)
T 3mfx_A 86 AQETTLICASGKAKDVELSISYIPGH--EP-MFVMVMHDLEH 124 (129)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEECSS--SC-EEEEEEEEC--
T ss_pred ceEEEEEcCCCCEEEEEEEEEEecCC--Cc-EEEEEEechhh
Confidence 57899999999999999999999843 22 37888899754
|
| >4hi4_A Aerotaxis transducer AER2; PAS domain, diatomic GAS sensor, signaling protein; HET: HEM GOL; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.27 E-value=2.8e-11 Score=113.52 Aligned_cols=106 Identities=17% Similarity=0.256 Sum_probs=81.8
Q ss_pred HHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhC------------CChhhhcCCCCCCCCCCCCCHHHHHHHHH
Q 002051 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTG------------YTSKEVVGRNCRFLQGAGTDPEDVAKIRE 255 (975)
Q Consensus 188 ~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~G------------ys~eEliG~~~~~l~~~~~~~~~~~~l~~ 255 (975)
..++++++++++++|+++|. +|+|+|+|++|++++| |+.++++|+++..+++. ......+..
T Consensus 4 ~~rl~~il~~~~~gviv~D~---~g~I~~~N~a~~~llg~~~~~i~~~~~g~~~~~~~G~~~~~~~~~---~~~~~~~~~ 77 (121)
T 4hi4_A 4 MARIASALDNVSANVMIADN---DLNIIYMNRTVSEMLGRAEADIRKQLPNFDAGRLMGANIDVFHKN---PAHQRHLLA 77 (121)
T ss_dssp HHHHHHHHTTSSSEEEEEET---TCBEEEECHHHHHHHHHTHHHHHHHCTTCCGGGCTTCBGGGGCSS---HHHHHHHHH
T ss_pred HHHHHHHHhcCCccEEEEcC---CCeEEEecHHHHHHHHHHHHHHHHhcCCCChHHhcCCCHHHhcCC---HHHHHHHHh
Confidence 45789999999999999999 9999999999999995 99999999998877653 223333333
Q ss_pred HHHcCCcEEEEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchh
Q 002051 256 TLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKH 306 (975)
Q Consensus 256 ~l~~g~~~~~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITer 306 (975)
.+. ..+..++. .+|. ++.++++|++|.+|++.|++++++|||++
T Consensus 78 ~~~--~~~~~~~~---~~~~--~~~~~~~pi~~~~g~~~g~v~~~~DiTee 121 (121)
T 4hi4_A 78 NLT--GVHKAELN---LGGR--RFSLDVVPVFNDANARLGSAVQWTDRTEE 121 (121)
T ss_dssp HCS--SCEEEEEE---ETTE--EEEEEEEEEECTTSCEEEEEEEEEECC--
T ss_pred CcC--CCcEEEEE---ECCE--EEEEEEEEEECCCCCEEEEEEEEEEecCC
Confidence 322 33444332 3554 55789999999999999999999999974
|
| >2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.26 E-value=1e-11 Score=121.84 Aligned_cols=121 Identities=16% Similarity=0.131 Sum_probs=97.1
Q ss_pred HHHHHHHHHhccCcEEEEeCCCCCCceEeccHH---HHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEE
Q 002051 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAG---FFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYC 264 (975)
Q Consensus 188 ~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a---~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~ 264 (975)
.+.+.++|++++++|+++|. +|+|+|+|++ +++++| ..++++|+++..++++. .....+.+...+++|+...
T Consensus 18 ~~~l~~IL~~~~~gI~~vD~---~g~I~~~N~a~~~~~~i~g-~~~~~iGr~v~~~~~~~-~~~~v~~i~~~l~~g~~~~ 92 (151)
T 2qkp_A 18 VEQANLILNHLPLEITFVNK---DDIFQYYNDSVPAAEMVFK-RTPSQVGRNVELCHPPK-VLDKVKKVFELLRNGQRDK 92 (151)
T ss_dssp HHHHHHHHHHSSSEEEEEET---TSBEEEECCCSCGGGCSSC-CCGGGTTSBGGGSSCHH-HHHHHHHHHHHHHTTSBSE
T ss_pred HHHHHHHHHhCCCceEEEcC---CCeEEEEeCCCchhhhhcC-CCHHHcCCCHHHhCCHH-HHHHHHHHHHHHHcCCccE
Confidence 35689999999999999999 9999999999 999999 56789999998876633 2333466777888888766
Q ss_pred EEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHhhh
Q 002051 265 GRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (975)
Q Consensus 265 ~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~ 314 (975)
.++.....+ ...++.++..|++|++|+++|++.+++|||+.++.+++++
T Consensus 93 ~~~~~~~~~-~~~~v~v~~~Pi~d~~G~~~G~vev~~Dit~l~~le~~r~ 141 (151)
T 2qkp_A 93 VNMWFQSER-LGKFVYVTYAAVRDQAGDFQGVLEYVQDIKPFFELDSEFN 141 (151)
T ss_dssp EEEEEEETT-TTEEEEEEEEEEECTTCCEEEEEEEEEECGGGGGGGGC--
T ss_pred EEEEEecCC-CCeEEEEEEEEEECCCCCEEEEEEEEEECHHHHhhhhhhh
Confidence 666543332 1246788899999999999999999999999998887754
|
| >3fc7_A HTR-like protein, sensor protein; APC87712.1, HTR-like protein,haloarcula marismortui ATCC 430 structural genomics, PSI-2; 2.65A {Haloarcula marismortui} | Back alignment and structure |
|---|
Probab=99.25 E-value=3.5e-12 Score=118.86 Aligned_cols=108 Identities=11% Similarity=0.125 Sum_probs=78.0
Q ss_pred hHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEE
Q 002051 187 VSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGR 266 (975)
Q Consensus 187 ~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e 266 (975)
+++.|+.++++++++|+++|. +|+|+++|++|++++||+.++++|+++..+++++...............+...
T Consensus 17 ~~~~~~~i~~~~~~~i~~~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 90 (125)
T 3fc7_A 17 TRKKFESLVSDSPDGIVHLTT---NGTILSVNPSMAGRLGADPDTLVGQQLSAVMDSEAANQRLEAGKSAVENGTAT--- 90 (125)
T ss_dssp ---------CCSCCEEEEEET---TSBEEEECHHHHHHHTSCHHHHTTSBGGGSSCHHHHHHHHHHHHHHHHHTSCE---
T ss_pred HHHHHHHHHhcCCCeEEEEcC---CCeEEEECHHHHHHhCCCHHHHcCccHHHhCCHHHHHHHHHHHHHHhcCCCeE---
Confidence 677899999999999999999 99999999999999999999999999887774333333333335555666543
Q ss_pred EEEEecCCC-EEEEEEEeeeeecCCCCEEEEEEEEeccc
Q 002051 267 LLNYKKDGT-PFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (975)
Q Consensus 267 ~~~~~kdG~-~~w~~~~i~pi~d~~G~v~~~v~~~rDIT 304 (975)
..++|. .+|+.+++.|+.+. |...+++++++|||
T Consensus 91 ---~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~DIT 125 (125)
T 3fc7_A 91 ---RSEDAVGGRHYHNQYIPVDSH-RKSDTFQLVSRDIT 125 (125)
T ss_dssp ---EEEEEETTEEEEEEEEESSTT-TTTTEEEEEEEECC
T ss_pred ---EeEcCCCcEEEEEEEEeEecC-CCeEEEEEEEecCC
Confidence 234555 78999999998765 66678999999998
|
| >4hi4_A Aerotaxis transducer AER2; PAS domain, diatomic GAS sensor, signaling protein; HET: HEM GOL; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.22 E-value=5e-11 Score=111.71 Aligned_cols=103 Identities=19% Similarity=0.288 Sum_probs=78.6
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcC------------CChhhhcCCCCCCcCCCCCCHHHHHHHHHHHH
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTE------------YSREEILGRNCRFLQGPETDPATVRKIRAAID 541 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~G------------y~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~ 541 (975)
++.++++++++|+++|.+|+ |+|+|++|++++| |++++++|++...+.+. ......+.....
T Consensus 7 l~~il~~~~~gviv~D~~g~---I~~~N~a~~~llg~~~~~i~~~~~g~~~~~~~G~~~~~~~~~---~~~~~~~~~~~~ 80 (121)
T 4hi4_A 7 IASALDNVSANVMIADNDLN---IIYMNRTVSEMLGRAEADIRKQLPNFDAGRLMGANIDVFHKN---PAHQRHLLANLT 80 (121)
T ss_dssp HHHHHTTSSSEEEEEETTCB---EEEECHHHHHHHHHTHHHHHHHCTTCCGGGCTTCBGGGGCSS---HHHHHHHHHHCS
T ss_pred HHHHHhcCCccEEEEcCCCe---EEEecHHHHHHHHHHHHHHHHhcCCCChHHhcCCCHHHhcCC---HHHHHHHHhCcC
Confidence 89999999999999999777 9999999999995 99999999998777643 222222222221
Q ss_pred cCCcEEEEEEEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcc
Q 002051 542 NQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEH 589 (975)
Q Consensus 542 ~g~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITer 589 (975)
..+..++. .+|. ++.++++|++|.+|++.|++++++|||++
T Consensus 81 --~~~~~~~~---~~~~--~~~~~~~pi~~~~g~~~g~v~~~~DiTee 121 (121)
T 4hi4_A 81 --GVHKAELN---LGGR--RFSLDVVPVFNDANARLGSAVQWTDRTEE 121 (121)
T ss_dssp --SCEEEEEE---ETTE--EEEEEEEEEECTTSCEEEEEEEEEECC--
T ss_pred --CCcEEEEE---ECCE--EEEEEEEEEECCCCCEEEEEEEEEEecCC
Confidence 33444443 2554 55889999999999999999999999984
|
| >3vol_A Aerotaxis transducer AER2; heme, oxygen sensor protein, PAS, HAMP, cyanoMet, CN-bound, protein; HET: HEM; 2.40A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.21 E-value=3.7e-11 Score=127.04 Aligned_cols=105 Identities=19% Similarity=0.286 Sum_probs=84.3
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHc------------CCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHH
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELT------------EYSREEILGRNCRFLQGPETDPATVRKIRAAID 541 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~------------Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~ 541 (975)
++.++++++++|+++|.+|+ |+|+|++|++++ ||++++++|+++..+++. ......++..+.
T Consensus 24 l~~iLd~~~~~vii~D~~g~---I~~~N~a~~~ll~~~~~~~~~~l~G~~~~eliG~~~~~~~~~---~~~~~~~~~~~~ 97 (233)
T 3vol_A 24 IKSALDNVSANVMIADNDLN---IIYMNRTVSEMLGRAEADIRKQLPNFDAGRLMGANIDVFHKN---PAHQRHLLANLT 97 (233)
T ss_dssp HHHHHTTSSSEEEEEETTSB---EEEECHHHHHHHHHTHHHHHTTCTTCCTTSCTTCBGGGGSSS---HHHHHHHHHTCC
T ss_pred HHHHHhcCCCcEEEECCCCc---EEEecHHHHHHHHHHHHHHHhhcCCCCHHHHcCCCHHHHcCC---HHHHHHHHHhcc
Confidence 78899999999999999776 999999999998 899999999998877653 233333333322
Q ss_pred cCCcEEEEEEEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccc
Q 002051 542 NQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (975)
Q Consensus 542 ~g~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~ 591 (975)
..+..++. .+|. |+.++++|++|++|++.|++++++|||++++
T Consensus 98 --~~~~~~~~---~~g~--~~~~~~~Pi~d~~G~~~g~v~~~~DITe~~~ 140 (233)
T 3vol_A 98 --GVHKAELN---LGGR--RFSLDVVPVFNDANERLGSAVQWTDRTEEHR 140 (233)
T ss_dssp --SCEEEEEE---ETTE--EEEEEEEEEECTTCCEEEEEEEEEECHHHHH
T ss_pred --cceeEEEE---ECCE--EEEEEEEEEECCCCCEEEEEEEEehhhHHHH
Confidence 23554443 3564 7799999999999999999999999999987
|
| >3fg8_A Uncharacterized protein RHA05790; PAS domain, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; HET: 3PB; 1.80A {Rhodococcus SP} | Back alignment and structure |
|---|
Probab=99.21 E-value=5.9e-12 Score=117.47 Aligned_cols=107 Identities=14% Similarity=0.086 Sum_probs=88.4
Q ss_pred CcHHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEE
Q 002051 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLI 551 (975)
Q Consensus 472 ~~l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~ 551 (975)
++++.++++++++|+++|.+|+ |+++|+++++++||++++++|+++..++++.........+..++..+.....++.
T Consensus 12 ~~~~~il~~~~~~i~~~D~~g~---i~~~N~a~~~l~g~~~~e~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (118)
T 3fg8_A 12 SGRENLYFQGGLGFMALDEDLR---IIYVNSGCLRHVRRSRDELLGRVVTEVLPETQGSYFDALCRKVLATGREQQTRVD 88 (118)
T ss_dssp -CCCCSSSCTTCEEEEECTTCB---EEEECHHHHHHHTCCHHHHTTSBHHHHCGGGTTSHHHHHHHHHHHHCCCEEEEEE
T ss_pred chHHHHHhhCCceEEEECCCCe---EEEECHHHHHHhCCCHHHHcCCcHHHHcCccchHHHHHHHHHHHHcCCceEEEEE
Confidence 4577889999999999999766 9999999999999999999999988888776666777788888888888777544
Q ss_pred EEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcc
Q 002051 552 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEH 589 (975)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITer 589 (975)
....+| .|+.+++.|+.+ | ++++++|||+|
T Consensus 89 ~~~~~g--~~~~~~~~p~~~--g----~v~~~~DITer 118 (118)
T 3fg8_A 89 SLYSPG--MTIEVTAAADSG--A----LVVHFRDVTAE 118 (118)
T ss_dssp CSSSTT--CEEEEEEEEETT--E----EEEEEEECSCC
T ss_pred EEcCCC--eEEEEEEEEcCC--c----EEEEEEeccCC
Confidence 444466 478888889854 3 78899999986
|
| >3fg8_A Uncharacterized protein RHA05790; PAS domain, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; HET: 3PB; 1.80A {Rhodococcus SP} | Back alignment and structure |
|---|
Probab=99.21 E-value=3.6e-12 Score=118.96 Aligned_cols=110 Identities=17% Similarity=0.135 Sum_probs=87.9
Q ss_pred chHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEE
Q 002051 186 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG 265 (975)
Q Consensus 186 ~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~ 265 (975)
...+..++++++++++|+++|. +|+|+++|+++++++||+.++++|+++..++++.........+.+++..+.....
T Consensus 9 ~~~~~~~~il~~~~~~i~~~D~---~g~i~~~N~a~~~l~g~~~~e~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (118)
T 3fg8_A 9 HHSSGRENLYFQGGLGFMALDE---DLRIIYVNSGCLRHVRRSRDELLGRVVTEVLPETQGSYFDALCRKVLATGREQQT 85 (118)
T ss_dssp ----CCCCSSSCTTCEEEEECT---TCBEEEECHHHHHHHTCCHHHHTTSBHHHHCGGGTTSHHHHHHHHHHHHCCCEEE
T ss_pred cccchHHHHHhhCCceEEEECC---CCeEEEECHHHHHHhCCCHHHHcCCcHHHHcCccchHHHHHHHHHHHHcCCceEE
Confidence 3344556788999999999999 9999999999999999999999999988888776666777788888998988776
Q ss_pred EEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchh
Q 002051 266 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKH 306 (975)
Q Consensus 266 e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITer 306 (975)
++.....+| .|+.+++.|+.+ | ++++++|||+|
T Consensus 86 ~~~~~~~~g--~~~~~~~~p~~~--g----~v~~~~DITer 118 (118)
T 3fg8_A 86 RVDSLYSPG--MTIEVTAAADSG--A----LVVHFRDVTAE 118 (118)
T ss_dssp EEECSSSTT--CEEEEEEEEETT--E----EEEEEEECSCC
T ss_pred EEEEEcCCC--eEEEEEEEEcCC--c----EEEEEEeccCC
Confidence 433333466 578888888743 3 78899999985
|
| >3fc7_A HTR-like protein, sensor protein; APC87712.1, HTR-like protein,haloarcula marismortui ATCC 430 structural genomics, PSI-2; 2.65A {Haloarcula marismortui} | Back alignment and structure |
|---|
Probab=99.21 E-value=7e-12 Score=116.76 Aligned_cols=106 Identities=11% Similarity=0.090 Sum_probs=77.5
Q ss_pred CcHHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEE
Q 002051 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLI 551 (975)
Q Consensus 472 ~~l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~ 551 (975)
..|+.++++++++|+++|.+|+ |+++|+++++++||+.++++|+++..+.+++...............+...
T Consensus 19 ~~~~~i~~~~~~~i~~~d~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 90 (125)
T 3fc7_A 19 KKFESLVSDSPDGIVHLTTNGT---ILSVNPSMAGRLGADPDTLVGQQLSAVMDSEAANQRLEAGKSAVENGTAT----- 90 (125)
T ss_dssp -------CCSCCEEEEEETTSB---EEEECHHHHHHHTSCHHHHTTSBGGGSSCHHHHHHHHHHHHHHHHHTSCE-----
T ss_pred HHHHHHHhcCCCeEEEEcCCCe---EEEECHHHHHHhCCCHHHHcCccHHHhCCHHHHHHHHHHHHHHhcCCCeE-----
Confidence 4489999999999999999776 99999999999999999999999888774333333333335555555543
Q ss_pred EEccCCc-EEEEEEEEeeeecCCCCEEEEEEEeecCC
Q 002051 552 NYTKSGK-KFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (975)
Q Consensus 552 ~~~kdG~-~~wv~~~~~pi~d~~G~i~~~v~i~rDIT 587 (975)
..++|. .+|+.+++.|+.+. |...+++++++|||
T Consensus 91 -~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~DIT 125 (125)
T 3fc7_A 91 -RSEDAVGGRHYHNQYIPVDSH-RKSDTFQLVSRDIT 125 (125)
T ss_dssp -EEEEEETTEEEEEEEEESSTT-TTTTEEEEEEEECC
T ss_pred -EeEcCCCcEEEEEEEEeEecC-CCeEEEEEEEecCC
Confidence 234555 77999999999875 66788999999998
|
| >2vlg_A Sporulation kinase A; histidine kinase, two-component regulatory system, two-component signal transduction, transferase, phosphorylation, SCOD; 1.7A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.21 E-value=1.4e-11 Score=114.26 Aligned_cols=93 Identities=11% Similarity=0.061 Sum_probs=70.2
Q ss_pred HHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEcc
Q 002051 476 TTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTK 555 (975)
Q Consensus 476 ~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~~k 555 (975)
.++++++++|+++|.+|+ |+|+|+++++++||+++|++|+++..++||++.....+.+. ..+.....++++++|
T Consensus 3 ~lle~~~d~i~v~d~~G~---i~yvn~~~~~~lGy~~~el~G~~~~~~ihp~D~~~~~~~~~---~~~~~~~~e~r~~~k 76 (111)
T 2vlg_A 3 FPLQTKTDIHAVLASNGR---IIYISANSKLHLGYLQGEMIGSFLKTFLHEEDQFLVESYFY---NEHHLMPCTFRFIKK 76 (111)
T ss_dssp ------CCEEEEECTTSB---EEEECTTHHHHHSCCHHHHTTSBGGGGBCGGGHHHHHHHHH---CSCCSSCEEEEEECT
T ss_pred chhhcCCCEEEEEcCCCe---EEEEChHHHHHhCCCHHHHcCCcHHHeECHhHHHHHHHHHh---ccCCCccEEEEEEcC
Confidence 478999999999998666 99999999999999999999999989999998776654432 233334568889999
Q ss_pred CCcEEEEEEEEeeeecCCC
Q 002051 556 SGKKFWNLFHLQPMRDQKG 574 (975)
Q Consensus 556 dG~~~wv~~~~~pi~d~~G 574 (975)
||+.+|++++++++++.++
T Consensus 77 dG~~~wve~~~~~v~~~~~ 95 (111)
T 2vlg_A 77 DHTIVWVEAAVEIVTTRAE 95 (111)
T ss_dssp TSCEEEEEEEEEEC-----
T ss_pred CCCEEEEEEEEEEEecccC
Confidence 9999999999999998655
|
| >4f3l_A Mclock, circadian locomoter output cycles protein kaput; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.2e-11 Score=139.59 Aligned_cols=109 Identities=11% Similarity=0.017 Sum_probs=98.9
Q ss_pred cCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCCEEE
Q 002051 199 QQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFW 278 (975)
Q Consensus 199 ~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~w 278 (975)
.+.++..|. +|+|+|+|++++.++||+++|++|+++..++||++.......++..+..|..+..+++.++|||+.+|
T Consensus 251 ~~f~~~~~~---dg~~~~vn~~~~~ilGY~~eEl~g~~~~~~iHpdD~~~~~~~~~~~l~~g~~~~~eyR~~~kdG~~vW 327 (361)
T 4f3l_A 251 EEFTSRHSL---EWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIW 327 (361)
T ss_dssp CEEEEEECT---TSBEEEECTTSHHHHCCCHHHHTTSBGGGGBCHHHHHHHHHHHHHHHHHSEEECCCEEEECTTSEEEE
T ss_pred ceeEEEEcC---CceEEEECChhhhhhCcCHHHHcCCCHHHeECHHHHHHHHHHHHHHHhCCCcceEEEEEEecCCCEEE
Confidence 445666777 99999999999999999999999999999999988888888888888888877788999999999999
Q ss_pred EEEEeeeeecC-CCCEEEEEEEEeccchhhHHH
Q 002051 279 NLLTIAPIKDD-EGKVLKFIGMQVEVSKHTEGA 310 (975)
Q Consensus 279 ~~~~i~pi~d~-~G~v~~~v~~~rDITerk~~e 310 (975)
++.+..|++|. +|++.+++|+.+|||+++..+
T Consensus 328 v~~~~~~v~~~~~g~~~~iv~~~~dITe~~~~~ 360 (361)
T 4f3l_A 328 LQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRA 360 (361)
T ss_dssp EEEEEEEEECTTTCCEEEEEEEEEECCHHHHHH
T ss_pred EEEEEEEEEcCCCCCeeEEEEEEEECChhHhhc
Confidence 99999999998 899999999999999998765
|
| >3a0r_A Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transfe two-component regulatory system; 3.80A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.9e-11 Score=136.89 Aligned_cols=140 Identities=14% Similarity=0.106 Sum_probs=111.1
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~ 553 (975)
++.++++++++|+++|.+|+ |++||++|++++||+++|++|+++..+.++ ......+...+..+.....+
T Consensus 10 ~~~i~~~~~~~i~~~d~~g~---i~~~N~a~~~l~G~~~~e~~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---- 79 (349)
T 3a0r_A 10 SESILESLETAIITLSKDGR---ITEWNKKAEQLFGLKKENVLGRRLKDLPDF---EEIGSVAESVFENKEPVFLN---- 79 (349)
T ss_dssp CCSSGGGSSSEEEEEESSSB---CSCBCHHHHHHHSCCSTTTTTCBSTTSTTT---THHHHHHHHHHHHCCCCEEE----
T ss_pred HHHHHhhhcCeEEEECCCCC---EEeeHHHHHHHhCCCHHHHcCcCHHHCcCh---hHHHHHHHHHHhcCCceeec----
Confidence 77899999999999999766 999999999999999999999998877332 23334455555556544322
Q ss_pred ccCCcEEEEEEEEeeeecCCCCE-EEEEEEeecCCcccccccCCCcchhhHHHHHHHHHHhhhhhhhhhcC
Q 002051 554 TKSGKKFWNLFHLQPMRDQKGEV-QYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEAVKEL 623 (975)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~i-~~~v~i~rDITerk~~e~~~~~~~~~~e~~~~v~~~~~~i~~~v~~l 623 (975)
...+..+|+.++++|+++.+|.. .|++++++|||++|+.+++....+..+....++..++|.+++++..+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~DiTe~~~~e~~~~~~~~~~~~~~~~~~i~Helr~pL~~i 150 (349)
T 3a0r_A 80 FYKFGERYFNIRFSPFRNAKTQLLEGVIITIDDVTELYKYEEERKRRERLSILGEMTARVAHEIRNPITII 150 (349)
T ss_dssp CCCBTTBCCEEEEEEECCTTTTSSCEEEEEEECCSTTTTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCceEEEEEEEEEEcCCCceeeEEEEEEEechHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHH
Confidence 12223358889999999988775 68999999999999988888877778888888889999998887654
|
| >2vlg_A Sporulation kinase A; histidine kinase, two-component regulatory system, two-component signal transduction, transferase, phosphorylation, SCOD; 1.7A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.19 E-value=1.5e-11 Score=114.01 Aligned_cols=94 Identities=17% Similarity=0.104 Sum_probs=69.2
Q ss_pred HHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEec
Q 002051 193 DALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKK 272 (975)
Q Consensus 193 ~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~k 272 (975)
.++++++++|+++|. +|+|+|+|+++++++||+++|++|+++..+.+|++.......+. ..+.....+++.++|
T Consensus 3 ~lle~~~d~i~v~d~---~G~i~yvn~~~~~~lGy~~~el~G~~~~~~ihp~D~~~~~~~~~---~~~~~~~~e~r~~~k 76 (111)
T 2vlg_A 3 FPLQTKTDIHAVLAS---NGRIIYISANSKLHLGYLQGEMIGSFLKTFLHEEDQFLVESYFY---NEHHLMPCTFRFIKK 76 (111)
T ss_dssp ------CCEEEEECT---TSBEEEECTTHHHHHSCCHHHHTTSBGGGGBCGGGHHHHHHHHH---CSCCSSCEEEEEECT
T ss_pred chhhcCCCEEEEEcC---CCeEEEEChHHHHHhCCCHHHHcCCcHHHeECHhHHHHHHHHHh---ccCCCccEEEEEEcC
Confidence 578999999999999 99999999999999999999999999988888887665544332 223334567888899
Q ss_pred CCCEEEEEEEeeeeecCCCC
Q 002051 273 DGTPFWNLLTIAPIKDDEGK 292 (975)
Q Consensus 273 dG~~~w~~~~i~pi~d~~G~ 292 (975)
||+.+|++++++++++..+.
T Consensus 77 dG~~~wve~~~~~v~~~~~~ 96 (111)
T 2vlg_A 77 DHTIVWVEAAVEIVTTRAER 96 (111)
T ss_dssp TSCEEEEEEEEEEC------
T ss_pred CCCEEEEEEEEEEEecccCC
Confidence 99999999999999887654
|
| >3b33_A Sensor protein; structural genomics, PAS domain, nitrogen regulation protein APC91440.4, PSI-2; HET: MSE; 1.83A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.18 E-value=5e-11 Score=109.77 Aligned_cols=107 Identities=21% Similarity=0.254 Sum_probs=84.8
Q ss_pred HHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcE-EEEEE
Q 002051 190 IVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSY-CGRLL 268 (975)
Q Consensus 190 ~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~-~~e~~ 268 (975)
+...++++++++|+++|. +|+|+++|++|++++||+.++++|+++..++++... ....+.+.+..+... ..+..
T Consensus 8 l~~~il~~~~~~i~~~D~---~g~I~~~N~aa~~l~g~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 82 (115)
T 3b33_A 8 LPSAILNNMVTATLILDD---GLAIRYANPAAELLFSQSAKRIVEQSLSQLIQHASL--DLALLTQPLQSGQSITDSDVT 82 (115)
T ss_dssp HHHHHHHHCSSEEEEECT---TCBEEEECHHHHHHTTSCHHHHTTCBHHHHCSEEEC--CTHHHHHHHHHCCCEEEEEEE
T ss_pred cHHHHHhhcCceEEEECC---CCcEEEECHHHHHHhCCCHHHHhCCCHHHHhCccch--hhHHHHHHHHcCCcccCCceE
Confidence 456799999999999999 999999999999999999999999998766553221 123445566666654 34555
Q ss_pred EEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccc
Q 002051 269 NYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (975)
Q Consensus 269 ~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDIT 304 (975)
.. ++|..+|+.+++.|+.+ +|. .+++.+++||+
T Consensus 83 ~~-~~g~~~~~~~~~~pi~~-~g~-~~~l~~~~Di~ 115 (115)
T 3b33_A 83 FV-VDGRPLMLEVTVSPITW-QRQ-LMLLVEMRKID 115 (115)
T ss_dssp EE-ETTEEEEEEEEEEEEEE-TTE-EEEEEEEEEC-
T ss_pred Ee-cCCCEEEEEEEEEEeec-CCc-eEEEEEEEeCC
Confidence 55 89999999999999998 776 68899999985
|
| >2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.17 E-value=7.8e-11 Score=115.54 Aligned_cols=115 Identities=17% Similarity=0.171 Sum_probs=92.1
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHH---HHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEE
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDS---FLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQL 550 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a---~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~ 550 (975)
+..++++++++|+++|.+|+ |+|+|++ +++++| ..++++|+++..+.++. .....+.+...+..|.....++
T Consensus 21 l~~IL~~~~~gI~~vD~~g~---I~~~N~a~~~~~~i~g-~~~~~iGr~v~~~~~~~-~~~~v~~i~~~l~~g~~~~~~~ 95 (151)
T 2qkp_A 21 ANLILNHLPLEITFVNKDDI---FQYYNDSVPAAEMVFK-RTPSQVGRNVELCHPPK-VLDKVKKVFELLRNGQRDKVNM 95 (151)
T ss_dssp HHHHHHHSSSEEEEEETTSB---EEEECCCSCGGGCSSC-CCGGGTTSBGGGSSCHH-HHHHHHHHHHHHHTTSBSEEEE
T ss_pred HHHHHHhCCCceEEEcCCCe---EEEEeCCCchhhhhcC-CCHHHcCCCHHHhCCHH-HHHHHHHHHHHHHcCCccEEEE
Confidence 78999999999999999777 9999999 999999 56889999987765432 2333456677777787766666
Q ss_pred EEEccC-CcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccccccC
Q 002051 551 INYTKS-GKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRN 595 (975)
Q Consensus 551 ~~~~kd-G~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~e~~ 595 (975)
+....+ | .++.++..|++|++|++.|++.+++|||+.++.+.+
T Consensus 96 ~~~~~~~~--~~v~v~~~Pi~d~~G~~~G~vev~~Dit~l~~le~~ 139 (151)
T 2qkp_A 96 WFQSERLG--KFVYVTYAAVRDQAGDFQGVLEYVQDIKPFFELDSE 139 (151)
T ss_dssp EEEETTTT--EEEEEEEEEEECTTCCEEEEEEEEEECGGGGGGGGC
T ss_pred EEecCCCC--eEEEEEEEEEECCCCCEEEEEEEEEECHHHHhhhhh
Confidence 653332 3 457889999999999999999999999999875544
|
| >3b33_A Sensor protein; structural genomics, PAS domain, nitrogen regulation protein APC91440.4, PSI-2; HET: MSE; 1.83A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.15 E-value=9.8e-11 Score=107.77 Aligned_cols=106 Identities=11% Similarity=0.093 Sum_probs=84.1
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcE-EEEEEE
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDV-TVQLIN 552 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~-~~e~~~ 552 (975)
...++++++++|+++|.+|+ |+++|+++++++||+.++++|+++..+.++... ....+...+..+... ..++..
T Consensus 9 ~~~il~~~~~~i~~~D~~g~---I~~~N~aa~~l~g~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 83 (115)
T 3b33_A 9 PSAILNNMVTATLILDDGLA---IRYANPAAELLFSQSAKRIVEQSLSQLIQHASL--DLALLTQPLQSGQSITDSDVTF 83 (115)
T ss_dssp HHHHHHHCSSEEEEECTTCB---EEEECHHHHHHTTSCHHHHTTCBHHHHCSEEEC--CTHHHHHHHHHCCCEEEEEEEE
T ss_pred HHHHHhhcCceEEEECCCCc---EEEECHHHHHHhCCCHHHHhCCCHHHHhCccch--hhHHHHHHHHcCCcccCCceEE
Confidence 56789999999999999777 999999999999999999999997766554321 123345556666553 456666
Q ss_pred EccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCC
Q 002051 553 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (975)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDIT 587 (975)
. ++|+.+|+.++++|+.+ +|. .+++.+++||+
T Consensus 84 ~-~~g~~~~~~~~~~pi~~-~g~-~~~l~~~~Di~ 115 (115)
T 3b33_A 84 V-VDGRPLMLEVTVSPITW-QRQ-LMLLVEMRKID 115 (115)
T ss_dssp E-ETTEEEEEEEEEEEEEE-TTE-EEEEEEEEEC-
T ss_pred e-cCCCEEEEEEEEEEeec-CCc-eEEEEEEEeCC
Confidence 6 89999999999999999 776 68999999985
|
| >4f3l_B BMAL1B; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.12 E-value=5.3e-11 Score=135.48 Aligned_cols=109 Identities=12% Similarity=0.025 Sum_probs=92.9
Q ss_pred hccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCc-EEEEEEEEecCCC
Q 002051 197 TFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS-YCGRLLNYKKDGT 275 (975)
Q Consensus 197 ~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~-~~~e~~~~~kdG~ 275 (975)
...+.++..|. +|+|+|+|++++.++||+++|++|+++..++||++.......+...+..++. ...+++.++|||+
T Consensus 276 ~~~~fi~~~~~---dg~~~~vn~~~~~ilGY~~eEl~g~~~~~~iHpdD~~~~~~~~~~~l~~~~~~~~~eyR~~~kdG~ 352 (387)
T 4f3l_B 276 KSMEYVSRHAI---DGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGS 352 (387)
T ss_dssp CCCEEEEEECT---TSBEEEECTHHHHHHCCCHHHHTTSBGGGTBCHHHHHHHHHHHHHHTTCSSCEECCCEEEECTTSC
T ss_pred CCceEEEEECC---CCEEEEECCCcccccCCCHHHHcCCcHHHeeCHHHHHHHHHHHHHHHhcCCCeeeEEEEEEccCCC
Confidence 34567778888 9999999999999999999999999999999998887777777777766554 5568999999999
Q ss_pred EEEEEEEeeeeecC-CCCEEEEEEEEeccchhhH
Q 002051 276 PFWNLLTIAPIKDD-EGKVLKFIGMQVEVSKHTE 308 (975)
Q Consensus 276 ~~w~~~~i~pi~d~-~G~v~~~v~~~rDITerk~ 308 (975)
++|++.+..+++|. .|++.+++|+.+|||+||+
T Consensus 353 ~vWv~~~~~~~~~~~~g~~~~ivg~~~dIT~Rk~ 386 (387)
T 4f3l_B 353 FITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVL 386 (387)
T ss_dssp EEEEEEEEEEEEETTTTEEEEEEEEEEECC----
T ss_pred EEEEEEEEEEEECCCCCCEEEEEEEEEEcchhhc
Confidence 99999999999987 8899999999999999874
|
| >1ll8_A PAS kinase; PAS domain, ligand binding, ligand screening, kinase regulation, transferase; NMR {Homo sapiens} SCOP: d.110.3.5 | Back alignment and structure |
|---|
Probab=99.11 E-value=2.4e-11 Score=112.07 Aligned_cols=102 Identities=14% Similarity=0.189 Sum_probs=76.7
Q ss_pred hccCcEEEEeCCCCC-CceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHH-HHHc-CCcE---EEEEEEE
Q 002051 197 TFQQTFVVSDATKPD-YPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRE-TLQN-GQSY---CGRLLNY 270 (975)
Q Consensus 197 ~~~d~i~i~D~~~~~-G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~-~l~~-g~~~---~~e~~~~ 270 (975)
+.+++|+++|. + |+|+++|++|++++||+.+|++|+++..++++..... ...+.. .+.. +... ..++..+
T Consensus 6 ~~~~~i~~~d~---~~g~I~~~N~aa~~l~G~~~~el~g~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (114)
T 1ll8_A 6 EFNKAIFTVDA---KTTEILVANDKACGLLGYSSQDLIGQKLTQFFLRSDSDV-VEALSEEHMEADGHAAVVFGTVVDII 81 (114)
T ss_dssp TTTCEEEEEET---TTCBEEEECTTHHHHHTCCTTTTTTSBGGGGSSCTTTHH-HHHTTSSTTSSSSCSSCCCSSSEEEC
T ss_pred CCCceEEEEEC---CCCeEEEehHHHHHHhCCCHHHHcCCCHHHhcCcchhHH-HHHHHHHhhccCCcceeccCcEEEEE
Confidence 34579999999 8 9999999999999999999999999988887765432 222222 1111 1111 2245667
Q ss_pred ecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccc
Q 002051 271 KKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (975)
Q Consensus 271 ~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDIT 304 (975)
++||+.+|++++++|+.+.++. +++++++|++
T Consensus 82 ~~dG~~~~v~~~~~~~~~~~~~--~~v~~~~~~~ 113 (114)
T 1ll8_A 82 SRSGEKIPVSVWMKRMRQERRL--CCVVVLEPVE 113 (114)
T ss_dssp CTTCCCEEEECCEECCBSSSSB--EEEEEEEECC
T ss_pred ecCCCEEEEEEEEEeeccCCcc--EEEEEEeecC
Confidence 9999999999999999876543 6789999986
|
| >1ll8_A PAS kinase; PAS domain, ligand binding, ligand screening, kinase regulation, transferase; NMR {Homo sapiens} SCOP: d.110.3.5 | Back alignment and structure |
|---|
Probab=99.08 E-value=3.7e-11 Score=110.78 Aligned_cols=103 Identities=15% Similarity=0.187 Sum_probs=77.7
Q ss_pred hccCcEEEEcCC-CCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHH-HHHc-CCc---EEEEEEEE
Q 002051 480 RIEKNFVITDPR-LPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRA-AIDN-QTD---VTVQLINY 553 (975)
Q Consensus 480 ~~~d~i~i~D~~-g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~-~l~~-g~~---~~~e~~~~ 553 (975)
+.+++|+++|.+ |+ |+++|++|+++|||+++|++|+++..++++++.... ..+.. .+.. +.. ...++..+
T Consensus 6 ~~~~~i~~~d~~~g~---I~~~N~aa~~l~G~~~~el~g~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (114)
T 1ll8_A 6 EFNKAIFTVDAKTTE---ILVANDKACGLLGYSSQDLIGQKLTQFFLRSDSDVV-EALSEEHMEADGHAAVVFGTVVDII 81 (114)
T ss_dssp TTTCEEEEEETTTCB---EEEECTTHHHHHTCCTTTTTTSBGGGGSSCTTTHHH-HHTTSSTTSSSSCSSCCCSSSEEEC
T ss_pred CCCceEEEEECCCCe---EEEehHHHHHHhCCCHHHHcCCCHHHhcCcchhHHH-HHHHHHhhccCCcceeccCcEEEEE
Confidence 456899999996 66 999999999999999999999998888887655432 22222 1111 111 13356778
Q ss_pred ccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCc
Q 002051 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSE 588 (975)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITe 588 (975)
++||+.+|++++++|+.+.++ .+++++++|++.
T Consensus 82 ~~dG~~~~v~~~~~~~~~~~~--~~~v~~~~~~~~ 114 (114)
T 1ll8_A 82 SRSGEKIPVSVWMKRMRQERR--LCCVVVLEPVER 114 (114)
T ss_dssp CTTCCCEEEECCEECCBSSSS--BEEEEEEEECCC
T ss_pred ecCCCEEEEEEEEEeeccCCc--cEEEEEEeecCC
Confidence 999999999999999987654 367899999863
|
| >2w0n_A Sensor protein DCUS; signal transduction, two-component regulatory system, PAS, kinase, membrane, transferase, solid state cell inner membrane; NMR {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.03 E-value=8.4e-11 Score=107.79 Aligned_cols=109 Identities=11% Similarity=0.153 Sum_probs=86.4
Q ss_pred cccCcchHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCC---ChhhhcCCCCCCCCCCCCCHHHHHHHHHHH
Q 002051 181 EKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGY---TSKEVVGRNCRFLQGAGTDPEDVAKIRETL 257 (975)
Q Consensus 181 e~~L~~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gy---s~eEliG~~~~~l~~~~~~~~~~~~l~~~l 257 (975)
.+.+.+..+.++.++++++++|+++|. +|+|+++|++|++++|| +.++++|+++..++++.. +...+
T Consensus 7 ~~~l~~~~~~~~~il~~~~~~i~~~d~---~g~i~~~N~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~-------~~~~~ 76 (118)
T 2w0n_A 7 PYEISTLFEQRQAMLQSIKEGVVAVDD---RGEVTLINDAAQELLNYRKSQDDEKLSTLSHSWSQVVD-------VSEVL 76 (118)
T ss_dssp HHHHCTTHHHHHHHHHCCCCCCEEEBT---TTBCCCBCHHHHHHHCSCTTTTTSSCCCTTCCCSCTHH-------HHHHH
T ss_pred HHHHHHHHHHHHHHHhhccccEEEECC---CCcEeehhHHHHHHhCCCccChhhhhccCcccccCchh-------HHHHh
Confidence 445677778899999999999999999 99999999999999998 899999999887766431 44555
Q ss_pred HcCCcEEEEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccc
Q 002051 258 QNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (975)
Q Consensus 258 ~~g~~~~~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDIT 304 (975)
..+....... ...+| .|+.++..|+.+ +|++.|++++++|||
T Consensus 77 ~~~~~~~~~~--~~~~~--~~~~~~~~p~~~-~g~~~g~v~~~~DiT 118 (118)
T 2w0n_A 77 RDGTPRRDEE--ITIKD--RLLLINTVPVRS-NGVIIGAISTFRDKT 118 (118)
T ss_dssp HTTCCCCCCC--EESSS--CEECCCEECCCC-SSCCCCEEECCCCCC
T ss_pred ccCceeccEE--EEECC--EEEEEeeceeee-CCEEEEEEEEEEeCC
Confidence 5555432211 23466 477888999987 788889999999998
|
| >3cax_A Uncharacterized protein PF0695; structural genomics, unknown function, PSI-2, protein struct initiative; 2.43A {Pyrococcus furiosus dsm 3638} | Back alignment and structure |
|---|
Probab=99.00 E-value=4.7e-10 Score=126.76 Aligned_cols=121 Identities=13% Similarity=0.195 Sum_probs=99.2
Q ss_pred cchHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEE
Q 002051 185 PRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYC 264 (975)
Q Consensus 185 ~~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~ 264 (975)
....+.+.++++++++||+++|. +|+|+|+|++ ++++ ++.++++|+++..++++. .......+...+.+|....
T Consensus 235 ~~~~~~l~~IL~~l~dgIivvD~---~g~I~~~N~a-e~i~-~~~~e~iGr~v~~~~p~~-~~~~~~~l~~~l~~g~~~~ 308 (369)
T 3cax_A 235 YLNIEELKAIFEALPVDVTFIDK---DDRVRFFSPG-ERIF-TRTPSVLGRPVQLCHPPK-SVYVVNKILKAFKEGRKKE 308 (369)
T ss_dssp EECHHHHHHHHHHSSSEEEEECT---TSBEEEECCS-SCSS-CCCGGGTTCBTTTSSCGG-GHHHHHHHHHHHHHTSCSC
T ss_pred hhhHHHHHHHHHhCCCcEEEECC---CCcEEEEcCH-HHcc-CChHHHcCCcHHHHCChh-hHHHHHHHHHHHHcCCceE
Confidence 34456789999999999999999 9999999999 9999 999999999999887743 2334456677788787655
Q ss_pred EEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHhhh
Q 002051 265 GRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (975)
Q Consensus 265 ~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~ 314 (975)
.+... .++| .++.++..|++|.+|+++|++.+++|||+.++.+++.+
T Consensus 309 ~~~~~-~~~g--~~v~v~~~PI~d~~G~~~G~v~v~~DITe~~~le~~rr 355 (369)
T 3cax_A 309 ATFWL-RLRE--KYVYIKYVPLFNEKGEYIGTLEMTMDIAPYKKIEGEKR 355 (369)
T ss_dssp EEEEE-EETT--EEEEEEEEEEECTTSCEEEEEEEEEECHHHHTCCSCCC
T ss_pred EEEEE-eeCC--EEEEEEEEEEECCCCCEEEEEEEEEcCHHHHHHHHHhH
Confidence 55443 3466 47889999999999999999999999999998876644
|
| >2ykf_A Pdtas, probable sensor histidine kinase pdtas; transferase, two-component system, GAF domain, PAS domain; 2.00A {Mycobacterium tuberculosis} PDB: 2ykh_A | Back alignment and structure |
|---|
Probab=98.55 E-value=4e-11 Score=131.70 Aligned_cols=112 Identities=15% Similarity=0.070 Sum_probs=78.5
Q ss_pred HHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcC---CChhhhcCCCCCCcCCCC---CCH--HHHHHHHHHHHc-CCc
Q 002051 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTE---YSREEILGRNCRFLQGPE---TDP--ATVRKIRAAIDN-QTD 545 (975)
Q Consensus 475 ~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~G---y~~eEllG~~~~~l~~~~---~~~--~~~~~~~~~l~~-g~~ 545 (975)
+.+++++++||+++|.+|+ |+++|++++++|| +. ++++|+++..+.+.. ... .+...+...+.. +..
T Consensus 173 ~~~~~~~~dGIivvD~~G~---Ii~~N~aA~~ll~~lG~~-~~~iGk~l~el~~~~~~~~~~~~~~~~~l~~vl~~~~~~ 248 (305)
T 2ykf_A 173 SRSSPRAGDGFIRLDVDGV---VSYASPNALSAYHRMGLT-TELEGVNLIDATRPLISDPFEAHEVDEHVQDLLAGDGKG 248 (305)
Confidence 4578899999999999777 9999999999985 54 789999987776543 110 122222223333 333
Q ss_pred EEEEEEEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccccccCC
Q 002051 546 VTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNS 596 (975)
Q Consensus 546 ~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~e~~~ 596 (975)
+..++. ..| .++.++..|+++ +|++.|++.+++|||++++.++++
T Consensus 249 ~~~ei~---~~~--~~l~v~~~Pi~~-~g~~~G~Vvv~rDITE~~~lE~eL 293 (305)
T 2ykf_A 249 MRMEVD---AGG--ATVLLRTLPLVV-AGRNVGAAILIRDVTEVKRRDRAL 293 (305)
Confidence 322222 123 467888899987 588899999999999999866554
|
| >3a0r_A Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transfe two-component regulatory system; 3.80A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.97 E-value=2.3e-10 Score=128.04 Aligned_cols=121 Identities=11% Similarity=0.112 Sum_probs=90.6
Q ss_pred CcchHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcE
Q 002051 184 LPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSY 263 (975)
Q Consensus 184 L~~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~ 263 (975)
++.+.++++.++++++++|+++|. +|+|+++|++|++++||+.+|++|+++..+.+. ......+...+..+...
T Consensus 3 l~~~~~~~~~i~~~~~~~i~~~d~---~g~i~~~N~a~~~l~G~~~~e~~G~~~~~~~~~---~~~~~~~~~~~~~~~~~ 76 (349)
T 3a0r_A 3 VEHLRNFSESILESLETAIITLSK---DGRITEWNKKAEQLFGLKKENVLGRRLKDLPDF---EEIGSVAESVFENKEPV 76 (349)
T ss_dssp ------CCCSSGGGSSSEEEEEES---SSBCSCBCHHHHHHHSCCSTTTTTCBSTTSTTT---THHHHHHHHHHHHCCCC
T ss_pred hHHHHHHHHHHHhhhcCeEEEECC---CCCEEeeHHHHHHHhCCCHHHHcCcCHHHCcCh---hHHHHHHHHHHhcCCce
Confidence 344556678899999999999999 999999999999999999999999998877332 23334455556666554
Q ss_pred EEEEEEEecCCCEEEEEEEeeeeecCCCCE-EEEEEEEeccchhhHHHHhhh
Q 002051 264 CGRLLNYKKDGTPFWNLLTIAPIKDDEGKV-LKFIGMQVEVSKHTEGAKDKM 314 (975)
Q Consensus 264 ~~e~~~~~kdG~~~w~~~~i~pi~d~~G~v-~~~v~~~rDITerk~~e~~l~ 314 (975)
.... ..+...|+.+++.|+.+..|.. .|++++++|||+++++|++++
T Consensus 77 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~DiTe~~~~e~~~~ 124 (349)
T 3a0r_A 77 FLNF----YKFGERYFNIRFSPFRNAKTQLLEGVIITIDDVTELYKYEEERK 124 (349)
T ss_dssp EEEC----CCBTTBCCEEEEEEECCTTTTSSCEEEEEEECCSTTTTTTTTTT
T ss_pred eecc----cccCceEEEEEEEEEEcCCCceeeEEEEEEEechHHHHHHHHHH
Confidence 3221 2223458889999999888875 589999999999999987765
|
| >1mzu_A PPR; photoactive yellow protein, PAS, PYP, signaling protein; HET: HC4; 2.00A {Rhodospirillum centenum} SCOP: d.110.3.1 | Back alignment and structure |
|---|
Probab=98.97 E-value=1.7e-09 Score=101.07 Aligned_cols=99 Identities=12% Similarity=0.100 Sum_probs=79.7
Q ss_pred HHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCC-CCCCCCCHHHHHHHHHHHHcCCcEEEEEEE-
Q 002051 192 KDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRF-LQGAGTDPEDVAKIRETLQNGQSYCGRLLN- 269 (975)
Q Consensus 192 ~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~-l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~- 269 (975)
.+++++++.|++++|. +|+|++||.++++++||+++|++|+++.. +.+......+...+.+.+..|. ......+
T Consensus 25 ~~~ld~l~~GiivlD~---dg~I~~~N~~~e~isG~s~eeviGk~~f~~~~p~~~~~~f~grf~~~~~~G~-l~~~~~yv 100 (129)
T 1mzu_A 25 TAEFDALPVGAIQVDG---SGVIHRYNRTESRLSGRIPERVIGRNFFTEVAPCTNIPAFSGRFMDGVTSGT-LDARFDFV 100 (129)
T ss_dssp CTTGGGCSSEEEEEET---TCBEEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHTSC-CEEEEEEE
T ss_pred HHHHhccCceEEEECC---CCeEEEEHHHHHHHhCCCHHHHcCCchhhhccchhcccHHHHHHHHHHhcCc-eeEEEEEE
Confidence 4479999999999999 99999999999999999999999999875 5555667777888889888776 4444444
Q ss_pred EecCCCEEEEEEEeeeeecCCCCEEEE
Q 002051 270 YKKDGTPFWNLLTIAPIKDDEGKVLKF 296 (975)
Q Consensus 270 ~~kdG~~~w~~~~i~pi~d~~G~v~~~ 296 (975)
.+++|.+++ ++++..++.+|...++
T Consensus 101 ~~~~~~p~~--v~i~l~~~~~~~~~~i 125 (129)
T 1mzu_A 101 FDFQMAPVR--VQIRMQNAGVPDRYWI 125 (129)
T ss_dssp EECSSCEEE--EEEEEEECSSTTEEEE
T ss_pred EcCCCCEEE--EEEEEEEcCCCCEEEE
Confidence 499999555 5555566788887654
|
| >3a0s_A Sensor protein; PAS-fold, kinase, phosphoprotein, transferase, two-component regulatory system; HET: PG4 PGE; 1.47A {Thermotoga maritima} PDB: 3a0v_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=5.1e-09 Score=90.88 Aligned_cols=95 Identities=12% Similarity=0.050 Sum_probs=74.2
Q ss_pred ccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCCEE
Q 002051 198 FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPF 277 (975)
Q Consensus 198 ~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~ 277 (975)
++++|+++|. +|+|+++|++|++++||+.++++|+++..+ + ........+...+..+..+... .++|...
T Consensus 1 ~~~~i~~~d~---~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 70 (96)
T 3a0s_A 1 METAIITLSK---DGRITEWNKKAEQLFGLKKENVLGRRLKDL-P--DFEEIGSVAESVFENKEPVFLN----FYKFGER 70 (96)
T ss_dssp CCCEEEEEET---TSBEEEECHHHHHHHCCCHHHHTTSBGGGS-T--TCHHHHHHHHHHHHHTCCEEEE----EEEETTE
T ss_pred CCceEEEEcC---CCCEeehhHHHHHHhCCCHHHhcCCCHHHC-c--chHHHHHHHHHHhccCCeEEEE----EEcCCcE
Confidence 4789999999 999999999999999999999999998877 3 2344455566667766665322 2244557
Q ss_pred EEEEEeeeeecCCCC-EEEEEEEEec
Q 002051 278 WNLLTIAPIKDDEGK-VLKFIGMQVE 302 (975)
Q Consensus 278 w~~~~i~pi~d~~G~-v~~~v~~~rD 302 (975)
|+.+++.|+.+.+|+ +.+++++++|
T Consensus 71 ~~~~~~~p~~~~~~~~~~g~v~~~~D 96 (96)
T 3a0s_A 71 YFNIRFSPFRNAKTQLLEGVIITIDD 96 (96)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEEEEC
T ss_pred EEEEEEEEeEcCCCCeeeEEEEEecC
Confidence 999999999988665 6789998887
|
| >1nwz_A PYP, photoactive yellow protein; PAS, LOV, GAF, domains fold, signaling protein; HET: HC4; 0.82A {Halorhodospira halophila} SCOP: d.110.3.1 PDB: 1kou_A* 1ot9_A* 1otb_A* 1s4r_A* 1s4s_A* 1ts0_A* 1ts6_A* 1ts7_A* 1ts8_A* 1uwn_X* 1uwp_X* 2d01_A* 2phy_A* 2pyp_A* 2pyr_A* 2qj5_A* 2qj7_A* 2qws_A* 2zoh_A* 2zoi_A* ... | Back alignment and structure |
|---|
Probab=98.94 E-value=4.7e-09 Score=97.98 Aligned_cols=99 Identities=20% Similarity=0.173 Sum_probs=80.0
Q ss_pred HHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCC-CCCCCCCHHHHHHHHHHHHcCCcEEEEEEE-
Q 002051 192 KDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRF-LQGAGTDPEDVAKIRETLQNGQSYCGRLLN- 269 (975)
Q Consensus 192 ~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~-l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~- 269 (975)
.++++++++|++++|. +|+|++||+++++++||++++++|+++.. +.+......+...+.+.+..|. ......+
T Consensus 20 ~~~ld~l~~Gii~lD~---~g~I~~~N~~~e~~sG~~~~eviGk~~f~~~~~~~~~~~f~~rf~~~~~~g~-l~~~~~~v 95 (125)
T 1nwz_A 20 DGQLDGLAFGAIQLDG---DGNILQYNAAEGDITGRDPKQVIGKNFFKDVAPCTDSPEFYGKFKEGVASGN-LNTMFEYT 95 (125)
T ss_dssp HHHHTTCSSEEEEEET---TCBEEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHHTC-CEEEEEEE
T ss_pred HHHHhccCceEEEECC---CCEEEEEHHHHHHHhCCCHHHHcCCchhhhccchhcccHHHHHHHHHHhcCc-eeEEEEEE
Confidence 5589999999999999 99999999999999999999999999875 5565667777888888888777 4444444
Q ss_pred EecCCCEEEEEEEeeeeecCCCCEEEE
Q 002051 270 YKKDGTPFWNLLTIAPIKDDEGKVLKF 296 (975)
Q Consensus 270 ~~kdG~~~w~~~~i~pi~d~~G~v~~~ 296 (975)
.+++|.++++ +++..++++|...++
T Consensus 96 ~~~~~~p~~v--~i~l~~~~~~~~~~i 120 (125)
T 1nwz_A 96 FDYQMTPTKV--KVHMKKALSGDSYWV 120 (125)
T ss_dssp ECTTSCCEEE--EEEEEECSSSSEEEE
T ss_pred EcCCCCEEEE--EEEEEEcCCCCEEEE
Confidence 4999996555 455566788887654
|
| >3cax_A Uncharacterized protein PF0695; structural genomics, unknown function, PSI-2, protein struct initiative; 2.43A {Pyrococcus furiosus dsm 3638} | Back alignment and structure |
|---|
Probab=98.92 E-value=1.9e-09 Score=121.86 Aligned_cols=114 Identities=16% Similarity=0.159 Sum_probs=93.2
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~ 553 (975)
+..++++++++|+++|.+|+ |+|+|++ +++| ++.++++|+++..++++. .....+.+...+..|.....+.+..
T Consensus 241 l~~IL~~l~dgIivvD~~g~---I~~~N~a-e~i~-~~~~e~iGr~v~~~~p~~-~~~~~~~l~~~l~~g~~~~~~~~~~ 314 (369)
T 3cax_A 241 LKAIFEALPVDVTFIDKDDR---VRFFSPG-ERIF-TRTPSVLGRPVQLCHPPK-SVYVVNKILKAFKEGRKKEATFWLR 314 (369)
T ss_dssp HHHHHHHSSSEEEEECTTSB---EEEECCS-SCSS-CCCGGGTTCBTTTSSCGG-GHHHHHHHHHHHHHTSCSCEEEEEE
T ss_pred HHHHHHhCCCcEEEECCCCc---EEEEcCH-HHcc-CChHHHcCCcHHHHCChh-hHHHHHHHHHHHHcCCceEEEEEEe
Confidence 78999999999999999777 9999999 9999 999999999988877643 3334455666777777655555443
Q ss_pred ccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCCcccccccCC
Q 002051 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNS 596 (975)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDITerk~~e~~~ 596 (975)
.+| .++.++.+||+|.+|++.|++++++|||+.++.+.+.
T Consensus 315 -~~g--~~v~v~~~PI~d~~G~~~G~v~v~~DITe~~~le~~r 354 (369)
T 3cax_A 315 -LRE--KYVYIKYVPLFNEKGEYIGTLEMTMDIAPYKKIEGEK 354 (369)
T ss_dssp -ETT--EEEEEEEEEEECTTSCEEEEEEEEEECHHHHTCCSCC
T ss_pred -eCC--EEEEEEEEEEECCCCCEEEEEEEEEcCHHHHHHHHHh
Confidence 456 4789999999999999999999999999998865543
|
| >2w0n_A Sensor protein DCUS; signal transduction, two-component regulatory system, PAS, kinase, membrane, transferase, solid state cell inner membrane; NMR {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.91 E-value=3.8e-10 Score=103.37 Aligned_cols=100 Identities=19% Similarity=0.185 Sum_probs=78.7
Q ss_pred cHHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCC---ChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEE
Q 002051 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEY---SREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQ 549 (975)
Q Consensus 473 ~l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy---~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e 549 (975)
.++.++++++++|+++|.+|+ |+++|+++++++|| +.++++|+++..+.++.. +...+..+......
T Consensus 16 ~~~~il~~~~~~i~~~d~~g~---i~~~N~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~ 85 (118)
T 2w0n_A 16 QRQAMLQSIKEGVVAVDDRGE---VTLINDAAQELLNYRKSQDDEKLSTLSHSWSQVVD-------VSEVLRDGTPRRDE 85 (118)
T ss_dssp HHHHHHHCCCCCCEEEBTTTB---CCCBCHHHHHHHCSCTTTTTSSCCCTTCCCSCTHH-------HHHHHHTTCCCCCC
T ss_pred HHHHHHhhccccEEEECCCCc---EeehhHHHHHHhCCCccChhhhhccCcccccCchh-------HHHHhccCceeccE
Confidence 378999999999999999776 99999999999998 889999999887765532 34455555443221
Q ss_pred EEEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCC
Q 002051 550 LINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (975)
Q Consensus 550 ~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDIT 587 (975)
. ...+| .|+.++..|+.+ +|.+.|++++++|||
T Consensus 86 ~--~~~~~--~~~~~~~~p~~~-~g~~~g~v~~~~DiT 118 (118)
T 2w0n_A 86 E--ITIKD--RLLLINTVPVRS-NGVIIGAISTFRDKT 118 (118)
T ss_dssp C--EESSS--CEECCCEECCCC-SSCCCCEEECCCCCC
T ss_pred E--EEECC--EEEEEeeceeee-CCEEEEEEEEEEeCC
Confidence 1 23456 477888999998 788889999999998
|
| >3a0s_A Sensor protein; PAS-fold, kinase, phosphoprotein, transferase, two-component regulatory system; HET: PG4 PGE; 1.47A {Thermotoga maritima} PDB: 3a0v_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=9.1e-09 Score=89.24 Aligned_cols=95 Identities=17% Similarity=0.150 Sum_probs=73.3
Q ss_pred ccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEccCCcEE
Q 002051 481 IEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKF 560 (975)
Q Consensus 481 ~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~~kdG~~~ 560 (975)
++++|+++|.+|+ |+++|+++++++||+.++++|+++..+ +. .......+...+..+..+..+ . .+|..+
T Consensus 1 ~~~~i~~~d~~g~---i~~~N~~~~~l~g~~~~~~~g~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~ 70 (96)
T 3a0s_A 1 METAIITLSKDGR---ITEWNKKAEQLFGLKKENVLGRRLKDL--PD-FEEIGSVAESVFENKEPVFLN--F--YKFGER 70 (96)
T ss_dssp CCCEEEEEETTSB---EEEECHHHHHHHCCCHHHHTTSBGGGS--TT-CHHHHHHHHHHHHHTCCEEEE--E--EEETTE
T ss_pred CCceEEEEcCCCC---EeehhHHHHHHhCCCHHHhcCCCHHHC--cc-hHHHHHHHHHHhccCCeEEEE--E--EcCCcE
Confidence 4789999999776 999999999999999999999997777 32 344455566666666655332 2 234456
Q ss_pred EEEEEEeeeecCCCC-EEEEEEEeec
Q 002051 561 WNLFHLQPMRDQKGE-VQYFIGVQLD 585 (975)
Q Consensus 561 wv~~~~~pi~d~~G~-i~~~v~i~rD 585 (975)
|+.+++.|+.+.+|. +.+++++++|
T Consensus 71 ~~~~~~~p~~~~~~~~~~g~v~~~~D 96 (96)
T 3a0s_A 71 YFNIRFSPFRNAKTQLLEGVIITIDD 96 (96)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEEEEC
T ss_pred EEEEEEEEeEcCCCCeeeEEEEEecC
Confidence 999999999998665 6799999887
|
| >2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.82 E-value=2.7e-09 Score=108.27 Aligned_cols=108 Identities=12% Similarity=0.095 Sum_probs=82.7
Q ss_pred cchHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCC--c
Q 002051 185 PRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ--S 262 (975)
Q Consensus 185 ~~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~--~ 262 (975)
++....++++++++++||+++|. +|+|+++|++|++++|++.++++|+++..++++.. +...+..+. .
T Consensus 76 ~~~~~~l~~il~~~~~gvi~~D~---~g~I~~~N~aa~~llg~~~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~ 145 (190)
T 2jhe_A 76 EREHLALSALLEALPEPVLSVDM---KSKVDMANPASCQLFGQKLDRLRNHTAAQLINGFN-------FLRWLESEPQDS 145 (190)
T ss_dssp THHHHHHHHHHHHCSSCEEEECT---TCBEEEECHHHHHHHTSCHHHHTTSBGGGTSTTCC-------HHHHHHTCCCSC
T ss_pred HHHHHHHHHHHHhCCCcEEEEcC---CCCEEEEcHHHHHHhCCCHHHhcCccHHHHhCCCC-------HHHHHhcCCCCC
Confidence 45567899999999999999999 99999999999999999999999999887776543 123344443 2
Q ss_pred EEEEEEEEecCCCEEEEEEEeeeeecCCCC----EEEEEEEEeccchhh
Q 002051 263 YCGRLLNYKKDGTPFWNLLTIAPIKDDEGK----VLKFIGMQVEVSKHT 307 (975)
Q Consensus 263 ~~~e~~~~~kdG~~~w~~~~i~pi~d~~G~----v~~~v~~~rDITerk 307 (975)
...++. .+|. ++.+++.|+.+.+|+ +.|++.+++|||+++
T Consensus 146 ~~~~~~---~~g~--~~~~~~~pi~~~~~~~~~~~~g~v~~~~DiTe~~ 189 (190)
T 2jhe_A 146 HNEHVV---INGQ--NFLMEITPVYLQDENDQHVLTGAVVMLRSTIRMG 189 (190)
T ss_dssp EEEEEE---ETTE--EEEEEEEEETTTTEEEEEEEE-HHHHHHHHTTTC
T ss_pred cceEEE---ECCe--EEEEEEEEEEecCCCCcceEEeEEEEEeccchhc
Confidence 333332 2775 456778899875665 788889999999875
|
| >2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.81 E-value=5.8e-09 Score=105.75 Aligned_cols=103 Identities=11% Similarity=0.057 Sum_probs=79.4
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCC--cEEEEEE
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQT--DVTVQLI 551 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~--~~~~e~~ 551 (975)
++.++++++++|+++|.+|+ |+++|+++++++|++.++++|+++..+.++... ...+..+. ....++.
T Consensus 82 l~~il~~~~~gvi~~D~~g~---I~~~N~aa~~llg~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 151 (190)
T 2jhe_A 82 LSALLEALPEPVLSVDMKSK---VDMANPASCQLFGQKLDRLRNHTAAQLINGFNF-------LRWLESEPQDSHNEHVV 151 (190)
T ss_dssp HHHHHHHCSSCEEEECTTCB---EEEECHHHHHHHTSCHHHHTTSBGGGTSTTCCH-------HHHHHTCCCSCEEEEEE
T ss_pred HHHHHHhCCCcEEEEcCCCC---EEEEcHHHHHHhCCCHHHhcCccHHHHhCCCCH-------HHHHhcCCCCCcceEEE
Confidence 88999999999999999777 999999999999999999999998887765432 22334443 2333443
Q ss_pred EEccCCcEEEEEEEEeeeecCCCC----EEEEEEEeecCCcccc
Q 002051 552 NYTKSGKKFWNLFHLQPMRDQKGE----VQYFIGVQLDGSEHLE 591 (975)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~d~~G~----i~~~v~i~rDITerk~ 591 (975)
. +|. ++.++++|+++.+|. +.|++.+++|||++++
T Consensus 152 ~---~g~--~~~~~~~pi~~~~~~~~~~~~g~v~~~~DiTe~~~ 190 (190)
T 2jhe_A 152 I---NGQ--NFLMEITPVYLQDENDQHVLTGAVVMLRSTIRMGR 190 (190)
T ss_dssp E---TTE--EEEEEEEEETTTTEEEEEEEE-HHHHHHHHTTTCC
T ss_pred E---CCe--EEEEEEEEEEecCCCCcceEEeEEEEEeccchhcC
Confidence 2 775 456778899876665 7889999999999864
|
| >1nwz_A PYP, photoactive yellow protein; PAS, LOV, GAF, domains fold, signaling protein; HET: HC4; 0.82A {Halorhodospira halophila} SCOP: d.110.3.1 PDB: 1kou_A* 1ot9_A* 1otb_A* 1s4r_A* 1s4s_A* 1ts0_A* 1ts6_A* 1ts7_A* 1ts8_A* 1uwn_X* 1uwp_X* 2d01_A* 2phy_A* 2pyp_A* 2pyr_A* 2qj5_A* 2qj7_A* 2qws_A* 2zoh_A* 2zoi_A* ... | Back alignment and structure |
|---|
Probab=98.79 E-value=2.5e-08 Score=93.04 Aligned_cols=100 Identities=9% Similarity=0.081 Sum_probs=79.4
Q ss_pred HHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCC-cCCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002051 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRF-LQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (975)
Q Consensus 475 ~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~-l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~ 553 (975)
+.+++++++|++++|.+|+ |++||.++++++||++++++|+++.. +.+......+...+.+.+..|. +..+..+.
T Consensus 20 ~~~ld~l~~Gii~lD~~g~---I~~~N~~~e~~sG~~~~eviGk~~f~~~~~~~~~~~f~~rf~~~~~~g~-l~~~~~~v 95 (125)
T 1nwz_A 20 DGQLDGLAFGAIQLDGDGN---ILQYNAAEGDITGRDPKQVIGKNFFKDVAPCTDSPEFYGKFKEGVASGN-LNTMFEYT 95 (125)
T ss_dssp HHHHTTCSSEEEEEETTCB---EEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHHTC-CEEEEEEE
T ss_pred HHHHhccCceEEEECCCCE---EEEEHHHHHHHhCCCHHHHcCCchhhhccchhcccHHHHHHHHHHhcCc-eeEEEEEE
Confidence 6689999999999999666 99999999999999999999999865 4455556667778888888776 55555554
Q ss_pred -ccCCcEEEEEEEEeeeecCCCCEEEEE
Q 002051 554 -TKSGKKFWNLFHLQPMRDQKGEVQYFI 580 (975)
Q Consensus 554 -~kdG~~~wv~~~~~pi~d~~G~i~~~v 580 (975)
+++|+ ++.++++..++.+|...+++
T Consensus 96 ~~~~~~--p~~v~i~l~~~~~~~~~~i~ 121 (125)
T 1nwz_A 96 FDYQMT--PTKVKVHMKKALSGDSYWVF 121 (125)
T ss_dssp ECTTSC--CEEEEEEEEECSSSSEEEEE
T ss_pred EcCCCC--EEEEEEEEEEcCCCCEEEEE
Confidence 99999 45566666777888776554
|
| >3rty_A Period circadian protein; PAS domain, signalling, timeless, circadian clock protein; 2.85A {Drosophila melanogaster} PDB: 1wa9_A 3gec_A | Back alignment and structure |
|---|
Probab=98.77 E-value=9.5e-09 Score=113.96 Aligned_cols=106 Identities=10% Similarity=0.030 Sum_probs=92.5
Q ss_pred cCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCc-----EEEEEEEEecC
Q 002051 199 QQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS-----YCGRLLNYKKD 273 (975)
Q Consensus 199 ~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~-----~~~e~~~~~kd 273 (975)
.+.++..+. +|+|+|+|+++..++||+++|++|+++..++||++.....+.++..+..|.. ...+++.+++|
T Consensus 154 ~~fi~r~~~---dG~~~yvn~~~~~lLGY~peELiG~s~~~~vHPdD~~~~~~~~~~~l~~G~~~~~~~~s~~yR~~~kd 230 (339)
T 3rty_A 154 PKFAIRHTA---TGIISHVDSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQN 230 (339)
T ss_dssp CEEEEEEET---TCBEEEECTTHHHHHCCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHHHHTTSTTCCCBCCCEEEECTT
T ss_pred ceEEEEECC---CCeEEEcChhhhcccCCCHHHHcCCcHHHEECHHHHHHHHHHHHHHHHcCCcccccccceEEEEEccC
Confidence 567888888 9999999999999999999999999999999999888888888888887764 35688999999
Q ss_pred CCEEEEEEEeeeeecCC-CCEEEEEEEEeccchhh
Q 002051 274 GTPFWNLLTIAPIKDDE-GKVLKFIGMQVEVSKHT 307 (975)
Q Consensus 274 G~~~w~~~~i~pi~d~~-G~v~~~v~~~rDITerk 307 (975)
|+.+|++.+.++++|.. |++.++||..+.|+...
T Consensus 231 G~~vWlet~~~~~~np~s~~~~~II~~h~vi~~p~ 265 (339)
T 3rty_A 231 GCYVLLETEWTSFVNPWSRKLEFVVGHHRVFQGPK 265 (339)
T ss_dssp SCEEEEEEEEEEEECTTTCSEEEEEEEEEEEECCS
T ss_pred CCEEEEEEEEEEEECCCCCCeeEEEEEEEECCCCC
Confidence 99999999999999865 56778899998888653
|
| >1mzu_A PPR; photoactive yellow protein, PAS, PYP, signaling protein; HET: HC4; 2.00A {Rhodospirillum centenum} SCOP: d.110.3.1 | Back alignment and structure |
|---|
Probab=98.76 E-value=3.6e-08 Score=92.15 Aligned_cols=100 Identities=10% Similarity=0.018 Sum_probs=78.7
Q ss_pred HHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCC-cCCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002051 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRF-LQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (975)
Q Consensus 475 ~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~-l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~ 553 (975)
..+++++++||+++|.+|+ |++||.++++++||+++|++|+++.. +.+......+...+.+.+..|. +..+..+.
T Consensus 25 ~~~ld~l~~GiivlD~dg~---I~~~N~~~e~isG~s~eeviGk~~f~~~~p~~~~~~f~grf~~~~~~G~-l~~~~~yv 100 (129)
T 1mzu_A 25 TAEFDALPVGAIQVDGSGV---IHRYNRTESRLSGRIPERVIGRNFFTEVAPCTNIPAFSGRFMDGVTSGT-LDARFDFV 100 (129)
T ss_dssp CTTGGGCSSEEEEEETTCB---EEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHTSC-CEEEEEEE
T ss_pred HHHHhccCceEEEECCCCe---EEEEHHHHHHHhCCCHHHHcCCchhhhccchhcccHHHHHHHHHHhcCc-eeEEEEEE
Confidence 3468999999999999766 99999999999999999999999865 4445566667788888888666 55555554
Q ss_pred -ccCCcEEEEEEEEeeeecCCCCEEEEE
Q 002051 554 -TKSGKKFWNLFHLQPMRDQKGEVQYFI 580 (975)
Q Consensus 554 -~kdG~~~wv~~~~~pi~d~~G~i~~~v 580 (975)
+++|+ ++.++++..++.+|...+++
T Consensus 101 ~~~~~~--p~~v~i~l~~~~~~~~~~i~ 126 (129)
T 1mzu_A 101 FDFQMA--PVRVQIRMQNAGVPDRYWIF 126 (129)
T ss_dssp EECSSC--EEEEEEEEEECSSTTEEEEE
T ss_pred EcCCCC--EEEEEEEEEEcCCCCEEEEE
Confidence 89999 45556666777888776553
|
| >2ykf_A Pdtas, probable sensor histidine kinase pdtas; transferase, two-component system, GAF domain, PAS domain; 2.00A {Mycobacterium tuberculosis} PDB: 2ykh_A | Back alignment and structure |
|---|
Probab=98.19 E-value=1.3e-09 Score=119.65 Aligned_cols=155 Identities=15% Similarity=0.120 Sum_probs=108.5
Q ss_pred CCCCCCCCcccCCCCCccceec-ccccc---ccccccCcchHHHHHHHH-----------------HhccCcEEEEeCCC
Q 002051 151 DDPNGKPGTSRRNSNNSVRSSG-EMSDE---GGKEKGLPRVSDIVKDAL-----------------STFQQTFVVSDATK 209 (975)
Q Consensus 151 ~~~~~~p~~~~~~~~~~~~~~~-di~~~---~~~e~~L~~~~~~l~~il-----------------d~~~d~i~i~D~~~ 209 (975)
......|..+.....|.+.... |+++. +..|....+..+.|..++ +++++||+++|.
T Consensus 111 v~~~~~Pi~~~g~vigvl~~~~~di~~~~~~~~~e~~~~~~~~~L~~mi~~~~~~~~~~~~~~~~~~~~~dGIivvD~-- 188 (305)
T 2ykf_A 111 HSVEVSPVRFGDQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDGFIRLDV-- 188 (305)
Confidence 5666778777666777777778 99976 345555445555555544 589999999999
Q ss_pred CCCceEeccHHHHHHhC---CChhhhcCCCCCCCCCCC---C-CH-HHHHHHHHHHHc-CCcEEEEEEEEecCCCEEEEE
Q 002051 210 PDYPIMYASAGFFKMTG---YTSKEVVGRNCRFLQGAG---T-DP-EDVAKIRETLQN-GQSYCGRLLNYKKDGTPFWNL 280 (975)
Q Consensus 210 ~~G~I~~~N~a~~~l~G---ys~eEliG~~~~~l~~~~---~-~~-~~~~~l~~~l~~-g~~~~~e~~~~~kdG~~~w~~ 280 (975)
+|+|+++|++|++++| ++ ++++|+++..+++.. . .. .....+...+.+ +.....++ ...| .++.
T Consensus 189 -~G~Ii~~N~aA~~ll~~lG~~-~~~iGk~l~el~~~~~~~~~~~~~~~~~l~~vl~~~~~~~~~ei---~~~~--~~l~ 261 (305)
T 2ykf_A 189 -DGVVSYASPNALSAYHRMGLT-TELEGVNLIDATRPLISDPFEAHEVDEHVQDLLAGDGKGMRMEV---DAGG--ATVL 261 (305)
Confidence 9999999999999985 55 789999988776643 1 10 122222334443 33332222 1223 4677
Q ss_pred EEeeeeecCCCCEEEEEEEEeccchhhHHHHhhhc
Q 002051 281 LTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (975)
Q Consensus 281 ~~i~pi~d~~G~v~~~v~~~rDITerk~~e~~l~~ 315 (975)
++..|+.+ +|++.|++.+++|||+.++.|++|+.
T Consensus 262 v~~~Pi~~-~g~~~G~Vvv~rDITE~~~lE~eL~~ 295 (305)
T 2ykf_A 262 LRTLPLVV-AGRNVGAAILIRDVTEVKRRDRALIS 295 (305)
Confidence 88899986 58888999999999999999999874
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=4e-08 Score=105.24 Aligned_cols=115 Identities=13% Similarity=0.096 Sum_probs=88.1
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-------------------------hccccccCCeEEEEEec
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------------------MLNRNKTKTHVCLITDY 723 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------------------~~~~~~~~~~~~lV~Ey 723 (975)
..|++...+|.|+++.||++.. .+..+++|+..... ++.........|+||||
T Consensus 14 ~~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~ 91 (263)
T 3tm0_A 14 EKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSE 91 (263)
T ss_dssp TTSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEEC
T ss_pred ccceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEe
Confidence 4689999999999999999975 36789999986410 11111245678999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-----------------------------------------
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC----------------------------------------- 762 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~----------------------------------------- 762 (975)
++|.+|.+.+. +......++.++..+|..||+
T Consensus 92 i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (263)
T 3tm0_A 92 ADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPF 164 (263)
T ss_dssp CSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSS
T ss_pred cCCeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccC
Confidence 99999987631 112234678899999999999
Q ss_pred ------------------CCCeecCCCCCCEEEecCCcEEEeeccCCC
Q 002051 763 ------------------QGIIYRDLKPENVLLQGNGHVSLTDFDLSC 792 (975)
Q Consensus 763 ------------------~gIiHrDIKp~NILl~~~g~vkL~DFG~a~ 792 (975)
..++|+|++|.|||++.++.+.|+||+.+.
T Consensus 165 ~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 165 KDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred CCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 458999999999999876556799999873
|
| >4dj3_A Period circadian protein homolog 3; PAS domain, circadian rhythm, protein binding; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.61 E-value=1.1e-07 Score=104.26 Aligned_cols=103 Identities=12% Similarity=0.062 Sum_probs=86.8
Q ss_pred CcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCc---EEEEEEEEecCCCE
Q 002051 200 QTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS---YCGRLLNYKKDGTP 276 (975)
Q Consensus 200 d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~---~~~e~~~~~kdG~~ 276 (975)
.-+...+. +|+|+|+|+++..++||+++|++|+++..++|+++.....+.+.+.+..++. ...+++.++|||+.
T Consensus 175 ~Fitrh~~---dG~~~yvs~~~~~lLGY~peELig~s~~~~vHPdD~~~~~~~~~~~l~~~~~~~f~s~~yR~~~kdG~~ 251 (317)
T 4dj3_A 175 IFTTTHTP---GCVFLEVDERAVPLLGYLPQDLIGTSILTYLHPEDRPLMVAIHQKVLKYAGHPPFEHSPVRFCTQNGEY 251 (317)
T ss_dssp EEEEEECT---TSBEEEECTTHHHHHSCCHHHHTTSBGGGGBCTTTTTHHHHHHHHHHHTTTSCCEECCCEEEECTTSCE
T ss_pred ceEEEecC---CCeEEEEChHHhhhcCcChHHHcCCCHHHeECHHHHHHHHHHHHHHHHcCCCccccceEEEEEccCCCE
Confidence 44555666 9999999999999999999999999999999999988888888888887664 35788999999999
Q ss_pred EEEEEEeeeeecC-CCCEEEEEEEEeccch
Q 002051 277 FWNLLTIAPIKDD-EGKVLKFIGMQVEVSK 305 (975)
Q Consensus 277 ~w~~~~i~pi~d~-~G~v~~~v~~~rDITe 305 (975)
+|++.+..+++|. .+++.++|+..+-|+.
T Consensus 252 vwvet~~~~~~np~s~~~e~II~~h~v~~~ 281 (317)
T 4dj3_A 252 VILDSSWSSFVNPWSRKVSFIIGRHKVRTS 281 (317)
T ss_dssp EEEEEEEEEEECSSSCCEEEEEEEEEECCC
T ss_pred EEEEEEEEEEECCCCCcccEEEEEEEeccC
Confidence 9999999999986 4666677777775543
|
| >3gdi_A Period circadian protein homolog 2; tandem PAS domains, biological rhythms, cytoplasm, nucleus, phosphoprotein, transcription; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.53 E-value=2.2e-07 Score=101.61 Aligned_cols=104 Identities=11% Similarity=0.065 Sum_probs=88.0
Q ss_pred CcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCc-EE-EEEEEEecCCCEE
Q 002051 200 QTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS-YC-GRLLNYKKDGTPF 277 (975)
Q Consensus 200 d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~-~~-~e~~~~~kdG~~~ 277 (975)
.-+...+. +|+|+|+|+++..++||.++|++|+++..++|+++.....+.+.+.+..++. .. .+++.++|||+.+
T Consensus 166 ~Fitrh~~---dG~~~yvd~~~~~lLGY~peELig~s~~~~iHpdD~~~~~~~~~~~l~~~g~~~~~~~yR~~~kdG~~v 242 (309)
T 3gdi_A 166 IFTTTHTP---NCLFQAVDERAVPLLGYLPQDLIETPVLVQLHPSDRPLMLAIHKKILQAGGQPFDYSPIRFRTRNGEYI 242 (309)
T ss_dssp EEEEEECT---TCBEEEECTTHHHHHSCCHHHHTTSBHHHHBCTTSHHHHHHHHHHHHHTTTCCEEEEEEEEECTTSCEE
T ss_pred eEEEEecC---CCeEEEECcccccccCcCHHHHcCCCHHHhCCHHHHHHHHHHHHHHHhcCCceeeceEEEEEccCCCEE
Confidence 35566666 9999999999999999999999999998899999887777778888875543 55 5899999999999
Q ss_pred EEEEEeeeeecC-CCCEEEEEEEEeccchh
Q 002051 278 WNLLTIAPIKDD-EGKVLKFIGMQVEVSKH 306 (975)
Q Consensus 278 w~~~~i~pi~d~-~G~v~~~v~~~rDITer 306 (975)
|++.+..++.|. .+++.++||..+-|+..
T Consensus 243 wvet~~~~~~np~s~~~e~ii~~h~v~~gp 272 (309)
T 3gdi_A 243 TLDTSWSSFINPWSRKISFIIGRHKVRVGP 272 (309)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEEEEEEECC
T ss_pred EEEEEEEEEECCCCCcccEEEEEEEEccCC
Confidence 999999999885 57788899988888753
|
| >4dj2_A Period circadian protein homolog 1; PAS domains, circadian clock protein, protein binding; 2.75A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.50 E-value=1.6e-07 Score=103.07 Aligned_cols=105 Identities=13% Similarity=0.092 Sum_probs=88.3
Q ss_pred cCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHc-CCcE-EEEEEEEecCCCE
Q 002051 199 QQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQN-GQSY-CGRLLNYKKDGTP 276 (975)
Q Consensus 199 ~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~-g~~~-~~e~~~~~kdG~~ 276 (975)
.+-+...+. +|+|+|+|+++..++||+++|++|+++..++|+++.....+.+.+.+.. |... ..+++.++|||+.
T Consensus 176 ~~Fitrh~~---dG~~~yvd~~~~~lLGY~peELig~s~~~~vHPdD~~~~~~~~~~~l~~~g~~~~~~~yR~~~kdG~~ 252 (320)
T 4dj2_A 176 RIFTTRHTP---SCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPFDHSPIRFCARNGEY 252 (320)
T ss_dssp CEEEEEECT---TCBEEEECTTHHHHHSCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHTTSSSCCEECCCEEEECSSSCE
T ss_pred ceEEEEecC---CceEEEcCcceeccCCcChHHHcCCcHHHhCCHHHHHHHHHHHHHHHhcCCCcccceEEEEEccCCCE
Confidence 345666666 9999999999999999999999999999999998887777777777774 4445 3588999999999
Q ss_pred EEEEEEeeeeecC-CCCEEEEEEEEeccchh
Q 002051 277 FWNLLTIAPIKDD-EGKVLKFIGMQVEVSKH 306 (975)
Q Consensus 277 ~w~~~~i~pi~d~-~G~v~~~v~~~rDITer 306 (975)
+|++.+.++++|. .+++.++||..+-|+..
T Consensus 253 vwvet~~~~~~np~s~~~e~II~~h~v~~gp 283 (320)
T 4dj2_A 253 VTMDTSWAGFVHPWSRKVAFVLGRHKVRTAP 283 (320)
T ss_dssp EEEECEEEEEECTTTCSEEEEEEEEEESSCC
T ss_pred EEEEEEEEEEECCCCCCccEEEEEEEEccCC
Confidence 9999999999885 67788899988888754
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=98.42 E-value=2.6e-07 Score=98.27 Aligned_cols=113 Identities=13% Similarity=0.084 Sum_probs=78.3
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-----------------------hccccccCCeEEEEEeccC
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-----------------------MLNRNKTKTHVCLITDYCP 725 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-----------------------~~~~~~~~~~~~lV~Ey~~ 725 (975)
..|.+....+.|.++.||++.. .+|..+++|+..... ++......+..|+||||++
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~ 98 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVP 98 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSCTTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCS
T ss_pred CCCceEecccCCCCceEEEEec-CCCCeEEEEeCCcccchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecC
Confidence 3455544445677799999964 567789999875431 0111113456799999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-----------------------------------------
Q 002051 726 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG----------------------------------------- 764 (975)
Q Consensus 726 ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~g----------------------------------------- 764 (975)
|.+|. .. ... ...++.++...|..||+..
T Consensus 99 G~~l~--~~-----~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (264)
T 1nd4_A 99 GQDLL--SS-----HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPA 168 (264)
T ss_dssp SEETT--TS-----CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHH
T ss_pred CcccC--cC-----cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHH
Confidence 98883 21 122 1245677777788887643
Q ss_pred -----------------CeecCCCCCCEEEecCCcEEEeeccCCC
Q 002051 765 -----------------IIYRDLKPENVLLQGNGHVSLTDFDLSC 792 (975)
Q Consensus 765 -----------------IiHrDIKp~NILl~~~g~vkL~DFG~a~ 792 (975)
++|+|++|.|||++.++.+.|+||+.+.
T Consensus 169 ~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 169 ELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 9999999999999877667799999873
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=98.27 E-value=7.5e-07 Score=100.11 Aligned_cols=117 Identities=16% Similarity=0.251 Sum_probs=85.4
Q ss_pred cccccccccCCceEEEEEEEeCCCeEEEEEEec--cchh----------------c-----------cccccC---CeEE
Q 002051 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMD--KGVM----------------L-----------NRNKTK---THVC 718 (975)
Q Consensus 671 y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~--~~~~----------------~-----------~~~~~~---~~~~ 718 (975)
...++.|+.|.++.||++... +..+++|+.. .... + ....+. +..|
T Consensus 40 ~~~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~ 117 (359)
T 3dxp_A 40 PLSVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAF 117 (359)
T ss_dssp CCEEEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCE
T ss_pred CceEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeE
Confidence 345678999999999998763 4678899876 2210 0 000112 3478
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH------------------------------------
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC------------------------------------ 762 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~------------------------------------ 762 (975)
+||||++|..+.+.. ...++......++.++...|..||+
T Consensus 118 ~vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (359)
T 3dxp_A 118 YIMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETES 193 (359)
T ss_dssp EEEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSC
T ss_pred EEEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcC
Confidence 999999987774321 1346788888999999999999997
Q ss_pred ----------------------CCCeecCCCCCCEEEecCCc--EEEeeccCCCc
Q 002051 763 ----------------------QGIIYRDLKPENVLLQGNGH--VSLTDFDLSCL 793 (975)
Q Consensus 763 ----------------------~gIiHrDIKp~NILl~~~g~--vkL~DFG~a~~ 793 (975)
..++|+|++|.|||++.++. +.|+||+.+..
T Consensus 194 ~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 194 IPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred ChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 36999999999999997653 68999998854
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.18 E-value=5.7e-07 Score=98.61 Aligned_cols=111 Identities=20% Similarity=0.213 Sum_probs=80.9
Q ss_pred ccccccCCceEEEEEEEeCCCeEEEEEEeccch----------hc----cc-----------cccC---CeEEEEEeccC
Q 002051 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV----------ML----NR-----------NKTK---THVCLITDYCP 725 (975)
Q Consensus 674 ~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~----------~~----~~-----------~~~~---~~~~lV~Ey~~ 725 (975)
++.++.|.++.||++. ..+++|+..... ++ .. .... ...|+||++++
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESSHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCCcchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 4569999999999874 458899865431 00 00 0011 13478999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-------------------------------------------
Q 002051 726 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC------------------------------------------- 762 (975)
Q Consensus 726 ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~------------------------------------------- 762 (975)
|.+|...... .++......++.|+...|..||+
T Consensus 100 G~~l~~~~~~----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 100 GVPLTPLLLN----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp CEECCHHHHH----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred CeECCccccc----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 9888754332 36777888888899988888886
Q ss_pred ---------------CCCeecCCCCCCEEEec--CCcEEEeeccCCCc
Q 002051 763 ---------------QGIIYRDLKPENVLLQG--NGHVSLTDFDLSCL 793 (975)
Q Consensus 763 ---------------~gIiHrDIKp~NILl~~--~g~vkL~DFG~a~~ 793 (975)
..++|+|++|.|||++. .+.+.|+||+.+..
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~ 223 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAI 223 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEE
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCcc
Confidence 13799999999999998 45688999998854
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00026 Score=77.38 Aligned_cols=112 Identities=19% Similarity=0.167 Sum_probs=74.9
Q ss_pred cccccccCCceEEEEEEEeCCCeEEEEEEeccch-------------hccc------------c-ccCCeEEEEEeccCC
Q 002051 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------MLNR------------N-KTKTHVCLITDYCPG 726 (975)
Q Consensus 673 i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------~~~~------------~-~~~~~~~lV~Ey~~g 726 (975)
-+..++.|....||++ |..+++|+-.... .+.. . ...+..|+||||++|
T Consensus 23 ~v~~l~~G~~n~v~~v-----g~~~VlR~~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 23 SVESLGEGFRNYAILV-----NGDWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp CEEEEEECSSEEEEEE-----TTTEEEEEESSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeeecCCCcceeEEEE-----CCEEEEEecCCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 3456889999999988 4668899864321 0000 0 123457899999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-------------------------------------------
Q 002051 727 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ------------------------------------------- 763 (975)
Q Consensus 727 gsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~------------------------------------------- 763 (975)
..|...... .++......++.++...|..||+.
T Consensus 98 ~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 98 QILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp EECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred eECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 888763221 244555555555555555555542
Q ss_pred -----------------CCeecCCCCCCEEEec---CCc-EEEeeccCCCc
Q 002051 764 -----------------GIIYRDLKPENVLLQG---NGH-VSLTDFDLSCL 793 (975)
Q Consensus 764 -----------------gIiHrDIKp~NILl~~---~g~-vkL~DFG~a~~ 793 (975)
.++|+|++|.|||++. ++. +.|+||+.+..
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 3599999999999997 355 58999998754
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0005 Score=73.36 Aligned_cols=111 Identities=17% Similarity=0.177 Sum_probs=75.6
Q ss_pred ccccCCce-EEEEEEEeCCCeEEEEEEeccch----------------------hccccccCCeEEEEEeccCCCCHHHH
Q 002051 676 PLGSGDTG-SVHLVELCGSGQYFAMKAMDKGV----------------------MLNRNKTKTHVCLITDYCPGGELFLL 732 (975)
Q Consensus 676 ~LG~G~fG-~Vy~a~~~~t~~~vAiK~l~~~~----------------------~~~~~~~~~~~~lV~Ey~~ggsL~~~ 732 (975)
.+..|..| .||+......+..+++|+-.... ++....+.+..|+|||+++|.++.+.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~ 110 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQV 110 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETHHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCCCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccccc
Confidence 34456655 69998887778889999864321 11222356778999999999888776
Q ss_pred HhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-------------------------------------------------
Q 002051 733 LDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ------------------------------------------------- 763 (975)
Q Consensus 733 l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~------------------------------------------------- 763 (975)
.... ......+..++...|..||+.
T Consensus 111 ~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 184 (272)
T 4gkh_A 111 LEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMH 184 (272)
T ss_dssp HHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHH
T ss_pred ccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHH
Confidence 5431 112233445555555555531
Q ss_pred ---------CCeecCCCCCCEEEecCCcEEEeeccCCC
Q 002051 764 ---------GIIYRDLKPENVLLQGNGHVSLTDFDLSC 792 (975)
Q Consensus 764 ---------gIiHrDIKp~NILl~~~g~vkL~DFG~a~ 792 (975)
.++|+|+.+.|||++.++.+-|+||+.+.
T Consensus 185 ~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 185 KLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp TTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred hcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 17899999999999987777899999874
|
| >1oj5_A Steroid receptor coactivator 1A; transcriptional coactivator, complex, LXXLL motif, transcriptional regulation; 2.2A {Mus musculus} SCOP: d.110.3.8 | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00039 Score=64.48 Aligned_cols=104 Identities=13% Similarity=0.097 Sum_probs=81.7
Q ss_pred cCcEEEEcCCCCCCCeeecCHHHHHHcCCCh--hhhcCCCCCCcCCCCCCH--HHHHHHHHHHHcCCcEEEEEEEEccCC
Q 002051 482 EKNFVITDPRLPDNPIIFASDSFLELTEYSR--EEILGRNCRFLQGPETDP--ATVRKIRAAIDNQTDVTVQLINYTKSG 557 (975)
Q Consensus 482 ~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~--eEllG~~~~~l~~~~~~~--~~~~~~~~~l~~g~~~~~e~~~~~kdG 557 (975)
..-+.-.|.+|+ |++|..... ..+|.+ +||+|+.+.+|+|++|.. ...+...+++..|.....-++++.|||
T Consensus 7 e~F~sRh~~dGK---f~~vDq~~~-r~~~~~g~qdLlGrsiy~f~H~~D~~~s~l~~h~~~vl~~Gq~~S~~YRfr~k~g 82 (132)
T 1oj5_A 7 ESFMTKQDTTGK---IISIDTSSL-RAAGRTGWEDLVRKCIYAFFQPQGREPSYARQLFQEVMTRGTASSPSYRFILNDG 82 (132)
T ss_dssp CEEEEEECTTCC---EEEEECHHH-HTTCCSCHHHHHHHHHHHHTSCBTTBCCHHHHHHHHHHHHSEEECCCEEEECTTS
T ss_pred eeeEEeecCCCc---EEEEecccc-cccccccHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHcCCccccceEEEecCC
Confidence 334555677556 999999887 477888 999999999999999965 778888888888887778899999999
Q ss_pred cEEEEEEEEeeeecC-CCCEEEEEEEeecCCcc
Q 002051 558 KKFWNLFHLQPMRDQ-KGEVQYFIGVQLDGSEH 589 (975)
Q Consensus 558 ~~~wv~~~~~pi~d~-~G~i~~~v~i~rDITer 589 (975)
..+|+......++|. .+++-+++++..=|.+.
T Consensus 83 ~~V~~qT~sk~f~np~t~e~e~Ivs~n~v~r~~ 115 (132)
T 1oj5_A 83 TMLSAHTRCKLCYPQSPDMQPFIMGIHIIDREH 115 (132)
T ss_dssp CEEEEEEEEEEECC----CCCEEEEEEEEECC-
T ss_pred cEEEEEEEEEEecCCCCCCCCEEEEEEEEEcCC
Confidence 999999999999884 34566677766555554
|
| >1oj5_A Steroid receptor coactivator 1A; transcriptional coactivator, complex, LXXLL motif, transcriptional regulation; 2.2A {Mus musculus} SCOP: d.110.3.8 | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00047 Score=63.95 Aligned_cols=99 Identities=9% Similarity=0.010 Sum_probs=77.3
Q ss_pred EEEEeCCCCCCceEeccHHHHHHhCCCh--hhhcCCCCCCCCCCCCCH--HHHHHHHHHHHcCCcEEEEEEEEecCCCEE
Q 002051 202 FVVSDATKPDYPIMYASAGFFKMTGYTS--KEVVGRNCRFLQGAGTDP--EDVAKIRETLQNGQSYCGRLLNYKKDGTPF 277 (975)
Q Consensus 202 i~i~D~~~~~G~I~~~N~a~~~l~Gys~--eEliG~~~~~l~~~~~~~--~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~ 277 (975)
+.-.|. +|+|+++..... ..+|.. +||+|+.+.+++++++.. ...+.+..++..|...+.-++.+.|+|..+
T Consensus 10 ~sRh~~---dGKf~~vDq~~~-r~~~~~g~qdLlGrsiy~f~H~~D~~~s~l~~h~~~vl~~Gq~~S~~YRfr~k~g~~V 85 (132)
T 1oj5_A 10 MTKQDT---TGKIISIDTSSL-RAAGRTGWEDLVRKCIYAFFQPQGREPSYARQLFQEVMTRGTASSPSYRFILNDGTML 85 (132)
T ss_dssp EEEECT---TCCEEEEECHHH-HTTCCSCHHHHHHHHHHHHTSCBTTBCCHHHHHHHHHHHHSEEECCCEEEECTTSCEE
T ss_pred EEeecC---CCcEEEEecccc-cccccccHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHcCCccccceEEEecCCcEE
Confidence 444566 999999999887 488888 999999999888888855 777888888888888777889999999999
Q ss_pred EEEEEeeeeecC-CCCEEEEEEEEeccc
Q 002051 278 WNLLTIAPIKDD-EGKVLKFIGMQVEVS 304 (975)
Q Consensus 278 w~~~~i~pi~d~-~G~v~~~v~~~rDIT 304 (975)
|+......+++. ..++-+++++-.=+.
T Consensus 86 ~~qT~sk~f~np~t~e~e~Ivs~n~v~r 113 (132)
T 1oj5_A 86 SAHTRCKLCYPQSPDMQPFIMGIHIIDR 113 (132)
T ss_dssp EEEEEEEEECC----CCCEEEEEEEEEC
T ss_pred EEEEEEEEecCCCCCCCCEEEEEEEEEc
Confidence 999988888774 334455666544443
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0038 Score=68.67 Aligned_cols=30 Identities=23% Similarity=0.318 Sum_probs=27.4
Q ss_pred CCCeecCCCCCCEEEecCCcEEEeeccCCC
Q 002051 763 QGIIYRDLKPENVLLQGNGHVSLTDFDLSC 792 (975)
Q Consensus 763 ~gIiHrDIKp~NILl~~~g~vkL~DFG~a~ 792 (975)
..++|+|+++.|||++.++.+.|+||+.+.
T Consensus 222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp CCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred CceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 579999999999999888899999999874
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=96.81 E-value=0.002 Score=72.99 Aligned_cols=30 Identities=13% Similarity=0.288 Sum_probs=25.7
Q ss_pred CCCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 763 QGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 763 ~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
..++|+|+.|.|||++.+ .++++||..+..
T Consensus 227 ~~L~HGDl~~~Nil~~~~-~~~lID~e~a~~ 256 (397)
T 2olc_A 227 ETLIHGDLHTGSIFASEH-ETKVIDPEFAFY 256 (397)
T ss_dssp CEEECSCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred CceeeCCCCcCcEEEeCC-CeEEEeCccccc
Confidence 579999999999999865 489999987754
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=96.62 E-value=0.012 Score=59.69 Aligned_cols=122 Identities=15% Similarity=0.060 Sum_probs=80.4
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcch
Q 002051 728 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 806 (975)
Q Consensus 728 sL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~-~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 806 (975)
+|.++|... ..++++++++.++.|.+.+|.-+-. ..-..+=+.|..|++..+|.|-+.+ +.+.
T Consensus 34 SL~eIL~~~-~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~-------------- 97 (229)
T 2yle_A 34 SLEEILRLY-NQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD-------------- 97 (229)
T ss_dssp EHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C-----------------
T ss_pred cHHHHHHHc-CCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc--------------
Confidence 688998865 4689999999999999999877632 1212333456899999999888774 2110
Q ss_pred hhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 002051 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 886 (975)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i~~~ 886 (975)
.....+.|||.+. ...+.+.-|||||+++|..+-=..|
T Consensus 98 -------------------------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~---------------- 135 (229)
T 2yle_A 98 -------------------------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK---------------- 135 (229)
T ss_dssp ----------------------------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC----------------
T ss_pred -------------------------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC----------------
Confidence 0122455777663 3456788999999999999842211
Q ss_pred CCCCCCCCCCcHHHHHHHHHhccc
Q 002051 887 DLKFPSSTPTSLHAKQLMYRLLHR 910 (975)
Q Consensus 887 ~~~~p~~~~~s~~~~~li~~~L~~ 910 (975)
......+|+.+..||..|..-
T Consensus 136 ---e~eE~eLS~~LE~LL~~Mt~~ 156 (229)
T 2yle_A 136 ---ENEERELSPPLEQLIDHMANT 156 (229)
T ss_dssp ---TTEEECCCHHHHHHHHHHTTC
T ss_pred ---cccchhhCHHHHHHHHHHHhc
Confidence 112245788999999999765
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=96.32 E-value=0.0048 Score=68.59 Aligned_cols=31 Identities=23% Similarity=0.417 Sum_probs=26.1
Q ss_pred CCCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 763 QGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 763 ~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
..++|+|+.|.|||++.++.+.|+||+.+..
T Consensus 222 ~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~ 252 (357)
T 3ats_A 222 PVLLWGDARVGNVLYRDFQPVAVLDWEMVAL 252 (357)
T ss_dssp CEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred ceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence 4699999999999999644579999998843
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=95.68 E-value=0.022 Score=61.59 Aligned_cols=29 Identities=21% Similarity=0.209 Sum_probs=24.9
Q ss_pred CCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 764 GIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 764 gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
.++|+|+.|.||| ..++.+.|+||..+..
T Consensus 174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 174 AACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 4899999999999 5677889999998744
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=95.65 E-value=0.014 Score=66.59 Aligned_cols=32 Identities=22% Similarity=0.370 Sum_probs=27.7
Q ss_pred HHCCCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 761 HCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 761 H~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
+...++|+|++|.|||++.++ ++++||+.+..
T Consensus 230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~ 261 (420)
T 2pyw_A 230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY 261 (420)
T ss_dssp BCCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred CCCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence 346799999999999999776 99999998854
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=94.40 E-value=0.079 Score=57.62 Aligned_cols=41 Identities=32% Similarity=0.601 Sum_probs=31.2
Q ss_pred HHHHHHHHHH-------CCCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 753 VVVALEYLHC-------QGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 753 Il~aL~yLH~-------~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
+...+.+++. .+++|+|+++.|||++.++.+.|+||+.+..
T Consensus 170 l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 170 IRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp HHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 3445556653 3699999999999999776668999998743
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=93.92 E-value=0.13 Score=55.91 Aligned_cols=56 Identities=14% Similarity=0.175 Sum_probs=38.9
Q ss_pred ccccccccCCceEEEEEEEeCCCeEEEEEEeccch-------------h-----------ccccccCCeEEEEEeccCCC
Q 002051 672 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------M-----------LNRNKTKTHVCLITDYCPGG 727 (975)
Q Consensus 672 ~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------~-----------~~~~~~~~~~~lV~Ey~~gg 727 (975)
.-++.|+.|.+..+|++.. ++..|++|+..... + +.........|+||||++|.
T Consensus 39 ~~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 39 KHKEKLYSGEMNEIWLIND--EVQTVFVKINERSYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp CEEEEECCSSSSEEEEEES--SSCEEEEEEEEGGGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eeeEEeCCccceeeeEEEE--CCCeEEEEeCCcccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 3457799999999999875 46788899875431 0 00111345789999999987
Q ss_pred CH
Q 002051 728 EL 729 (975)
Q Consensus 728 sL 729 (975)
.+
T Consensus 117 ~~ 118 (312)
T 3jr1_A 117 KN 118 (312)
T ss_dssp CC
T ss_pred CC
Confidence 54
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=93.35 E-value=0.13 Score=56.38 Aligned_cols=31 Identities=26% Similarity=0.380 Sum_probs=27.0
Q ss_pred CCCeecCCCCCCEEEecC----CcEEEeeccCCCc
Q 002051 763 QGIIYRDLKPENVLLQGN----GHVSLTDFDLSCL 793 (975)
Q Consensus 763 ~gIiHrDIKp~NILl~~~----g~vkL~DFG~a~~ 793 (975)
..++|+|+.+.|||++.+ +.+.|+||+.+..
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 469999999999999874 6899999998854
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=92.14 E-value=0.13 Score=55.03 Aligned_cols=35 Identities=20% Similarity=0.211 Sum_probs=28.7
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEec
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMD 703 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~ 703 (975)
.....-+..+|.|..+.||++.. .+|+.|++|+..
T Consensus 14 G~~v~~v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~ 48 (288)
T 3f7w_A 14 GREVAAVAERGHSHRWHLYRVEL-ADGTPLFVKALP 48 (288)
T ss_dssp CCCEEEEEEEEEETTEEEEEEEE-TTSCEEEEEECC
T ss_pred CCCeEEEEecCCCCCeEEEEEEE-CCCCEEEEEEeC
Confidence 34566678899999999999986 578899999854
|
| >3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A* | Back alignment and structure |
|---|
Probab=88.49 E-value=0.21 Score=56.39 Aligned_cols=29 Identities=28% Similarity=0.401 Sum_probs=24.8
Q ss_pred CeecCCCCCCEEEe------cCCcEEEeeccCCCc
Q 002051 765 IIYRDLKPENVLLQ------GNGHVSLTDFDLSCL 793 (975)
Q Consensus 765 IiHrDIKp~NILl~------~~g~vkL~DFG~a~~ 793 (975)
++|+|+.+.|||+. .++.+.++||..|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 68999999999994 456799999998854
|
| >2ool_A Sensor protein; bacteriophytochrome, photoconversion, photoreceptor, biliver signaling protein; HET: LBV; 2.20A {Rhodopseudomonas palustris} SCOP: d.110.2.1 d.110.3.9 | Back alignment and structure |
|---|
Probab=86.87 E-value=0.63 Score=50.83 Aligned_cols=78 Identities=13% Similarity=0.174 Sum_probs=49.1
Q ss_pred CcE-EEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCc---EEEEEEEEcc-CC
Q 002051 483 KNF-VITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD---VTVQLINYTK-SG 557 (975)
Q Consensus 483 d~i-~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~---~~~e~~~~~k-dG 557 (975)
.|+ +++|.. +++|+.+|..+++++|+++++++|++...+++++... .+...+..+.. ...+++.... +|
T Consensus 42 ~G~Ll~~~~~--~~~i~~~S~N~~~~lg~~~~~llG~~l~~ll~~~~~~----~l~~~l~~~~~~~~~p~~~~~~~~~~~ 115 (337)
T 2ool_A 42 HGYLFVVSET--DLRIASVSANVEDLLRQPPASLLNVPIAHYLTAASAA----RLTHALHGGDPAAINPIRLDVVTPDGE 115 (337)
T ss_dssp TSEEEEECTT--TCBEEEEETTHHHHHSSCGGGGTTCBGGGGBCHHHHH----HHHHHHCC----CCCSEEEEEEETTEE
T ss_pred CEEEEEEECC--CCEEEEEehhHHHHHCcCHHHHcCCCHHHHcCHHHHH----HHHHHHhcCCccccCcEEEEEeccCCC
Confidence 344 445653 4569999999999999999999999988888764433 34444433221 1123333333 45
Q ss_pred cEEEEEEEE
Q 002051 558 KKFWNLFHL 566 (975)
Q Consensus 558 ~~~wv~~~~ 566 (975)
..+|+.++.
T Consensus 116 ~~f~~~~Hr 124 (337)
T 2ool_A 116 RAFNGILHR 124 (337)
T ss_dssp EEEEEEEEE
T ss_pred eEEEEEEEE
Confidence 667766554
|
| >2ool_A Sensor protein; bacteriophytochrome, photoconversion, photoreceptor, biliver signaling protein; HET: LBV; 2.20A {Rhodopseudomonas palustris} SCOP: d.110.2.1 d.110.3.9 | Back alignment and structure |
|---|
Probab=83.48 E-value=1.2 Score=48.49 Aligned_cols=52 Identities=15% Similarity=0.172 Sum_probs=39.5
Q ss_pred EEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHc
Q 002051 202 FVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQN 259 (975)
Q Consensus 202 i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~ 259 (975)
++++|. .+++|+.+|..+++++|+++++++|+++..+++++. ...+...+..
T Consensus 45 Ll~~~~--~~~~i~~~S~N~~~~lg~~~~~llG~~l~~ll~~~~----~~~l~~~l~~ 96 (337)
T 2ool_A 45 LFVVSE--TDLRIASVSANVEDLLRQPPASLLNVPIAHYLTAAS----AARLTHALHG 96 (337)
T ss_dssp EEEECT--TTCBEEEEETTHHHHHSSCGGGGTTCBGGGGBCHHH----HHHHHHHHCC
T ss_pred EEEEEC--CCCEEEEEehhHHHHHCcCHHHHcCCCHHHHcCHHH----HHHHHHHHhc
Confidence 345554 258999999999999999999999999988877533 3445555544
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=80.14 E-value=0.98 Score=48.89 Aligned_cols=29 Identities=17% Similarity=0.108 Sum_probs=25.1
Q ss_pred CCCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 763 QGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 763 ~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
..++|+|+++.|||++ + .+.|+||+.+..
T Consensus 195 ~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 195 VLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred eeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 4689999999999998 4 899999998743
|
| >1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A* | Back alignment and structure |
|---|
Probab=80.03 E-value=11 Score=34.59 Aligned_cols=77 Identities=21% Similarity=0.317 Sum_probs=47.2
Q ss_pred CcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCCEEEE
Q 002051 200 QTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWN 279 (975)
Q Consensus 200 d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~w~ 279 (975)
+.|+++|. +|..++... .+.+|+++.. .+ .+..++. |+.+.... .|+..+.
T Consensus 51 ~~i~v~d~---~G~~~a~~~----------~~~iG~~~~~--~~--------~~~~al~-G~~~~~~~-----~g~~g~~ 101 (131)
T 1p0z_A 51 TYITVGDA---SGQRLYHVN----------PDEIGKSMEG--GD--------SDEALIN-AKSYVSVR-----KGSLGSS 101 (131)
T ss_dssp SEEEEEET---TSBEEECSS----------GGGTTSBCCS--SC--------CHHHHHH-CCCEEEEE-----EETTEEE
T ss_pred CEEEEEcC---CCcEEEecC----------hhhCCCcccC--CC--------cHHHHhC-CCeEEEEE-----Eccceee
Confidence 58899999 998887543 4458876431 11 1223444 44443321 2222232
Q ss_pred EEEeeeeecCCCCEEEEEEEEeccch
Q 002051 280 LLTIAPIKDDEGKVLKFIGMQVEVSK 305 (975)
Q Consensus 280 ~~~i~pi~d~~G~v~~~v~~~rDITe 305 (975)
-....||++++|+++|++.+..++..
T Consensus 102 ~~~~~PV~~~~g~viGvv~vg~~l~~ 127 (131)
T 1p0z_A 102 LRGKSPIQDATGKVIGIVSVGYTIEQ 127 (131)
T ss_dssp EEEEEEEECTTCCEEEEEEEEEEGGG
T ss_pred EEEEEeEECCCCCEEEEEEEEEEhHH
Confidence 33445999888999999999888764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 975 | ||||
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 7e-65 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 7e-59 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 4e-57 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 2e-55 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 5e-55 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 1e-54 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 2e-54 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 3e-54 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 1e-53 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 4e-53 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 1e-52 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 4e-52 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 4e-51 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 6e-51 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 6e-51 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 6e-51 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 3e-50 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 5e-50 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 3e-49 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 6e-49 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 8e-49 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 2e-46 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 6e-44 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 7e-44 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 2e-43 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 7e-43 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 9e-42 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 1e-40 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 3e-40 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 3e-40 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 4e-40 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 7e-40 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 7e-40 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 1e-39 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 2e-39 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 1e-38 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 4e-38 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 1e-37 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 2e-37 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 3e-37 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 3e-37 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 6e-37 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 6e-36 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 1e-35 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 6e-35 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 2e-34 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 2e-34 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 3e-34 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 3e-34 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 3e-34 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 4e-34 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 8e-34 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 1e-33 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 5e-33 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 2e-32 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 4e-32 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 2e-31 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 1e-30 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 2e-30 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 8e-30 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 9e-29 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 6e-25 | |
| d1n9la_ | 109 | d.110.3.6 (A:) Putative blue light receptor, phot- | 1e-24 | |
| d1n9la_ | 109 | d.110.3.6 (A:) Putative blue light receptor, phot- | 1e-24 | |
| d1jnua_ | 104 | d.110.3.6 (A:) Photoreceptor phy3 flavin-binding d | 4e-23 | |
| d1jnua_ | 104 | d.110.3.6 (A:) Photoreceptor phy3 flavin-binding d | 4e-21 | |
| d1bywa_ | 110 | d.110.3.6 (A:) Erg potassium channel, N-terminal d | 4e-16 | |
| d1bywa_ | 110 | d.110.3.6 (A:) Erg potassium channel, N-terminal d | 7e-13 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 8e-10 | |
| d1xj3a1 | 106 | d.110.3.2 (A:154-259) Histidine kinase FixL heme d | 9e-07 | |
| d1xj3a1 | 106 | d.110.3.2 (A:154-259) Histidine kinase FixL heme d | 8e-06 | |
| d1ew0a_ | 130 | d.110.3.2 (A:) Histidine kinase FixL heme domain { | 7e-06 | |
| d1ew0a_ | 130 | d.110.3.2 (A:) Histidine kinase FixL heme domain { | 3e-05 | |
| d1ll8a_ | 114 | d.110.3.5 (A:) N-terminal PAS domain of Pas kinase | 7e-05 | |
| d1p97a_ | 114 | d.110.3.7 (A:) Hypoxia-inducible factor Hif2a, C-t | 3e-04 | |
| d1p97a_ | 114 | d.110.3.7 (A:) Hypoxia-inducible factor Hif2a, C-t | 0.001 | |
| d1mzua_ | 110 | d.110.3.1 (A:) PYP domain of sensor histidine kina | 0.001 |
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 218 bits (556), Expect = 7e-65
Identities = 90/309 (29%), Positives = 134/309 (43%), Gaps = 58/309 (18%)
Query: 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK----------------- 712
F+ K LG G +V L + + +A+K ++K ++ NK
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 713 ----------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC 762
+ Y GEL + + E RFY AE+V ALEYLH
Sbjct: 69 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHG 126
Query: 763 QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 822
+GII+RDLKPEN+LL + H+ +TDF + + S +
Sbjct: 127 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE------------------------- 161
Query: 823 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 882
+NSFVGT +Y++PE++ + D WALG ++Y+++ G PFR F
Sbjct: 162 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK 221
Query: 883 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE--GANEIKKHPFFKGVNWALVR 940
I+ + FP A+ L+ +LL D RLG E G +K HPFF+ V W +
Sbjct: 222 IIKLEYDFPEK--FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLH 279
Query: 941 CMNPPELDA 949
PP+L A
Sbjct: 280 QQTPPKLTA 288
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 200 bits (510), Expect = 7e-59
Identities = 78/293 (26%), Positives = 112/293 (38%), Gaps = 64/293 (21%)
Query: 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK--------------- 712
L+ F +PLG G G+V+L S A+K + K +
Sbjct: 5 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 64
Query: 713 ------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYL 760
T V LI +Y P G ++ L + E Y E+ AL Y
Sbjct: 65 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 122
Query: 761 HCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVF 820
H + +I+RD+KPEN+LL G + + DF S
Sbjct: 123 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA-------------------------- 156
Query: 821 MAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880
P + GT +Y+ PE+I G H VD W+LG+L YE L G PF T Q+T+
Sbjct: 157 ---PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 213
Query: 881 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933
I + FP A+ L+ RLL +P R E+ +HP+
Sbjct: 214 KRISRVEFTFPDFVTEG--ARDLISRLLKHNPSQRP----MLREVLEHPWITA 260
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 197 bits (502), Expect = 4e-57
Identities = 97/349 (27%), Positives = 157/349 (44%), Gaps = 75/349 (21%)
Query: 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK--------------- 712
++ F K LG G G V L E + Q+FA+KA+ K V+L +
Sbjct: 1 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 60
Query: 713 -------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEY 759
TK ++ + +Y GG+L + FYAAE+++ L++
Sbjct: 61 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQF 118
Query: 760 LHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPV 819
LH +GI+YRDLK +N+LL +GH+ + DF +
Sbjct: 119 LHSKGIVYRDLKLDNILLDKDGHIKIADFGMCK--------------------------- 151
Query: 820 FMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879
+N+F GT +YIAPEI+ G + +VDWW+ G+LLYEML G +PF G+ ++
Sbjct: 152 ENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL 211
Query: 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 939
F +I + +P AK L+ +L R+P+ RLG +I++HP F+ +NW +
Sbjct: 212 FHSIRMDNPFYPRWLEKE--AKDLLVKLFVREPEKRLGV---RGDIRQHPLFREINWEEL 266
Query: 940 --RCMNPP-------ELDAPLFATDTEKEYKVVDPG----MQDLQQNVF 975
+ ++PP D F + E + + + QN+F
Sbjct: 267 ERKEIDPPFRPKVKSPFDCSNFDKEFLNEKPRLSFADRALINSMDQNMF 315
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 193 bits (490), Expect = 2e-55
Identities = 103/347 (29%), Positives = 160/347 (46%), Gaps = 68/347 (19%)
Query: 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK------------- 712
+ + F +K LG G G V LV +G+Y+AMK + K V++ +++
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 713 --------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALE 758
T +C + +Y GGELF L R+ E+ RFY AE+V ALE
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALE 119
Query: 759 YLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNP 818
YLH + ++YRD+K EN++L +GH+ +TDF L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK-------------------------- 153
Query: 819 VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878
+F GT EY+APE++ + AVDWW LG+++YEM+ G PF + ++
Sbjct: 154 -EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER 212
Query: 879 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWA 937
F IL ++++FP + AK L+ LL +DPK RLG A E+ +H FF +NW
Sbjct: 213 LFELILMEEIRFPRTLSPE--AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQ 270
Query: 938 LV--RCMNPP-------ELDAPLFATDTEKEYKVVDPGMQDLQQNVF 975
V + + PP E+D F + + + P + +
Sbjct: 271 DVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITPPDRYDSLGLL 317
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 192 bits (490), Expect = 5e-55
Identities = 70/326 (21%), Positives = 122/326 (37%), Gaps = 61/326 (18%)
Query: 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN---------------- 711
L H+ + LG+G G VH V +G FA K + ++
Sbjct: 25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 84
Query: 712 --------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ 763
+ + +I ++ GGELF + + K + ED Y +V L ++H
Sbjct: 85 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHMHEN 143
Query: 764 GIIYRDLKPENVLL--QGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFM 821
++ DLKPEN++ + + + L DF L+
Sbjct: 144 NYVHLDLKPENIMFTTKRSNELKLIDFGLTA----------------------------H 175
Query: 822 AEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881
+P ++ GT E+ APE+ G D W++G+L Y +L G +PF G+ +T
Sbjct: 176 LDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLR 235
Query: 882 NILHKDLKFPSSTPTSL--HAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 939
N+ D S + + K + +LL DP +R+ ++ +HP+ N
Sbjct: 236 NVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRM----TIHQALEHPWLTPGNAPGR 291
Query: 940 RCMNPPELDAPLFATDTEKEYKVVDP 965
P + + K +P
Sbjct: 292 DSQIPSSRYTKIRDSIKTKYDAWPEP 317
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 190 bits (483), Expect = 1e-54
Identities = 111/346 (32%), Positives = 160/346 (46%), Gaps = 73/346 (21%)
Query: 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK--------------- 712
LQ F+ ++ LG+G G VHL+ +G+Y+AMK + K +++ +
Sbjct: 3 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT 62
Query: 713 ------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYL 760
+ +I DY GGELF LL + +FYAAEV +ALEYL
Sbjct: 63 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRF--PNPVAKFYAAEVCLALEYL 120
Query: 761 HCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVF 820
H + IIYRDLKPEN+LL NGH+ +TDF +
Sbjct: 121 HSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT---------------------- 158
Query: 821 MAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880
+ GT +YIAPE+++ + ++DWW+ GIL+YEML GYTPF KT+
Sbjct: 159 --------YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTY 210
Query: 881 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWA-- 937
IL+ +L+FP K L+ RL+ RD RLG+ G ++K HP+FK V W
Sbjct: 211 EKILNAELRFPPFFNED--VKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKL 268
Query: 938 LVRCMNPP--------ELDAPLFATDTEKEYKVVDPGMQDLQQNVF 975
L R + P + D F E++ G D ++F
Sbjct: 269 LSRNIETPYEPPIQQGQGDTSQFDKYPEEDINYGVQGE-DPYADLF 313
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 188 bits (478), Expect = 2e-54
Identities = 73/306 (23%), Positives = 113/306 (36%), Gaps = 76/306 (24%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK---------------- 712
+++ P + LG G + V + + +A+K +D + +
Sbjct: 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 62
Query: 713 ------------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVV 754
T T L+ D GELF L + T L E R ++
Sbjct: 63 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALL 120
Query: 755 VALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKG 814
+ LH I++RDLKPEN+LL + ++ LTDF SC
Sbjct: 121 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ--------------------- 159
Query: 815 QQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA------GHTSAVDWWALGILLYEMLYGY 868
+P GT Y+APEII + G+ VD W+ G+++Y +L G
Sbjct: 160 -------LDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS 212
Query: 869 TPFRGKTRQKTFANILHKDLKFPSSTPTSL--HAKQLMYRLLHRDPKSRLGSHEGANEIK 926
PF + + I+ + +F S K L+ R L P+ R A E
Sbjct: 213 PPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRY----TAEEAL 268
Query: 927 KHPFFK 932
HPFF+
Sbjct: 269 AHPFFQ 274
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 190 bits (484), Expect = 3e-54
Identities = 70/309 (22%), Positives = 122/309 (39%), Gaps = 61/309 (19%)
Query: 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK--------------- 712
++ ++ LGSG G VH +G+ F K ++ L++
Sbjct: 28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPK 87
Query: 713 ---------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ 763
K + LI ++ GGELF + + K + E V Y + L+++H
Sbjct: 88 LINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVINYMRQACEGLKHMHEH 146
Query: 764 GIIYRDLKPENVLL--QGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFM 821
I++ D+KPEN++ + V + DF L+ +
Sbjct: 147 SIVHLDIKPENIMCETKKASSVKIIDFGLATKLN-------------------------- 180
Query: 822 AEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881
P T E+ APEI+ D WA+G+L Y +L G +PF G+ +T
Sbjct: 181 --PDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQ 238
Query: 882 NILHKDLKFPSSTPTSL--HAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 939
N+ D +F +S+ AK + LL ++P+ RL ++ +HP+ KG + L
Sbjct: 239 NVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRL----TVHDALEHPWLKGDHSNLT 294
Query: 940 RCMNPPELD 948
+ +
Sbjct: 295 SRIPSSRYN 303
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 186 bits (474), Expect = 1e-53
Identities = 57/294 (19%), Positives = 107/294 (36%), Gaps = 62/294 (21%)
Query: 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV----------------------- 706
+ I LG G G V+ + + A K +D
Sbjct: 13 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV 72
Query: 707 -MLNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGI 765
+L+ + ++ ++ ++C GG + ++ + L E ++ + + AL YLH I
Sbjct: 73 KLLDAFYYENNLWILIEFCAGGAVDAVMLEL-ERPLTESQIQVVCKQTLDALNYLHDNKI 131
Query: 766 IYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPM 825
I+RDLK N+L +G + L DF +S +
Sbjct: 132 IHRDLKAGNILFTLDGDIKLADFGVSA---------------------------KNTRTI 164
Query: 826 RASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880
+ +SF+GT ++APE++ + D W+LGI L EM P +
Sbjct: 165 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVL 224
Query: 881 ANILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933
I + + S + K + + L ++ +R +++ +HPF
Sbjct: 225 LKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARW----TTSQLLQHPFVTV 274
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 187 bits (476), Expect = 4e-53
Identities = 95/356 (26%), Positives = 153/356 (42%), Gaps = 81/356 (22%)
Query: 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK------------- 712
+ + F + +G G G V+ +G+ +AMK +DK + +
Sbjct: 1 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 60
Query: 713 -----------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVV 755
T + I D GG+L L + E +RFYAAE+++
Sbjct: 61 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF--SEADMRFYAAEIIL 118
Query: 756 ALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQ 815
LE++H + ++YRDLKP N+LL +GHV ++D L+C S K
Sbjct: 119 GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----------------- 161
Query: 816 QNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEMLYGYTPFRGK 874
++ VGT Y+APE++ G + S+ DW++LG +L+++L G++PFR
Sbjct: 162 ------------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 209
Query: 875 TRQKTFANILHKDLKFPSSTPTSL--HAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFF 931
+ I L P S + L+ LL RD RLG GA E+K+ PFF
Sbjct: 210 KTKDKH-EIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 268
Query: 932 KGVNWALV--RCMNPP------------ELDAPLFATDTEKEYKVVDPGMQDLQQN 973
+ ++W +V + PP D F + K K++D Q+L +N
Sbjct: 269 RSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKLLDS-DQELYRN 323
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 185 bits (469), Expect = 1e-52
Identities = 114/325 (35%), Positives = 161/325 (49%), Gaps = 65/325 (20%)
Query: 658 KILDSGEQINLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNK-- 712
+ E++ +++F +K LG+G G V LV +G+ +AMK + K ++ + K
Sbjct: 13 NLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTT 72
Query: 713 ---------------------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDA 745
T+T + LI DY GGELF L ++ E
Sbjct: 73 EHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER--FTEHE 130
Query: 746 VRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 805
V+ Y E+V+ALE+LH GIIYRD+K EN+LL NGHV LTDF LS
Sbjct: 131 VQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSK------------- 177
Query: 806 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYE 863
F+A+ + F GT EY+AP+I+ G +GH AVDWW+LG+L+YE
Sbjct: 178 -------------EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYE 224
Query: 864 MLYGYTPFRGKTRQKTFANILHKDLKFPSSTPT--SLHAKQLMYRLLHRDPKSRLGS-HE 920
+L G +PF + + A I + LK P S AK L+ RLL +DPK RLG
Sbjct: 225 LLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPR 284
Query: 921 GANEIKKHPFFKGVNWALVRCMNPP 945
A+EIK+H FF+ +NW + P
Sbjct: 285 DADEIKEHLFFQKINWDDLAAKKVP 309
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 181 bits (461), Expect = 4e-52
Identities = 61/292 (20%), Positives = 114/292 (39%), Gaps = 58/292 (19%)
Query: 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKT-------------- 713
++ + ++ LG G G V L + + A+K +D ++ +
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 714 -----------KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC 762
L +YC GGELF ++ + E + + +++ + YLH
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHG 121
Query: 763 QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 822
GI +RD+KPEN+LL ++ ++DF L+ + +
Sbjct: 122 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR----------------------- 158
Query: 823 EPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQ-KTF 880
R N GT Y+APE++ H VD W+ GI+L ML G P+ + + +
Sbjct: 159 --ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 216
Query: 881 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
++ K L++++L +P +R+ +IKK ++
Sbjct: 217 SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARI----TIPDIKKDRWYN 264
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 179 bits (456), Expect = 4e-51
Identities = 60/291 (20%), Positives = 108/291 (37%), Gaps = 63/291 (21%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK---------------- 712
+ + + +G G +G+V+ +GQ A++ M+ +
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 713 --------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG 764
+ ++ +Y GG L ++ E + E + ALE+LH
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD---EGQIAAVCRECLQALEFLHSNQ 136
Query: 765 IIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEP 824
+I+RD+K +N+LL +G V LTDF +
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCA---------------------------QITPE 169
Query: 825 MRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANIL 884
++ VGT ++APE++ + VD W+LGI+ EM+ G P+ + + I
Sbjct: 170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA 229
Query: 885 HK---DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
+L+ P + + R L D + R A E+ +H F K
Sbjct: 230 TNGTPELQNPEKLSAI--FRDFLNRCLDMDVEKRG----SAKELLQHQFLK 274
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 178 bits (452), Expect = 6e-51
Identities = 61/295 (20%), Positives = 110/295 (37%), Gaps = 67/295 (22%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK------------------ 712
+ + +G+G G + G+ K +D G M K
Sbjct: 6 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 65
Query: 713 ----------TKTHVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYL 760
T T + ++ +YC GG+L ++ + + + L E+ V ++ +AL+
Sbjct: 66 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC 125
Query: 761 HCQG-----IIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQ 815
H + +++RDLKP NV L G +V L DF L+
Sbjct: 126 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR----------------------- 162
Query: 816 QNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 875
+ + +FVGT Y++PE + + D W+LG LLYE+ PF +
Sbjct: 163 ----ILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 218
Query: 876 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 930
+++ I + S +++ R+L+ R EI ++P
Sbjct: 219 QKELAGKIREGKFRRIPYR-YSDELNEIITRMLNLKDYHRP----SVEEILENPL 268
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 179 bits (455), Expect = 6e-51
Identities = 75/314 (23%), Positives = 123/314 (39%), Gaps = 72/314 (22%)
Query: 653 WKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK 712
WK + I D + LG+G V L E + + A+K + K + +
Sbjct: 1 WKQAEDIRD--------IYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEG 52
Query: 713 -------------------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVR 747
+ H+ LI GGELF + + E
Sbjct: 53 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK--GFYTERDAS 110
Query: 748 FYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTSCKPQLLLPT 804
+V+ A++YLH GI++RDLKPEN+L + + ++DF LS +
Sbjct: 111 RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED--------- 161
Query: 805 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 864
P ++ GT Y+APE++A ++ AVD W++G++ Y +
Sbjct: 162 -------------------PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYIL 202
Query: 865 LYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSL--HAKQLMYRLLHRDPKSRLGSHEGA 922
L GY PF + K F IL + +F S + AK + L+ +DP+ R
Sbjct: 203 LCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRF----TC 258
Query: 923 NEIKKHPFFKGVNW 936
+ +HP+ G
Sbjct: 259 EQALQHPWIAGDTA 272
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 179 bits (456), Expect = 6e-51
Identities = 62/294 (21%), Positives = 100/294 (34%), Gaps = 67/294 (22%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK---------------- 712
+ F ++ +G G G+V+ + + A+K M + K
Sbjct: 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 74
Query: 713 -----------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH 761
+ L+ +YC G LL + K L+E + + L YLH
Sbjct: 75 PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLH 132
Query: 762 CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFM 821
+I+RD+K N+LL G V L DF + +
Sbjct: 133 SHNMIHRDVKAGNILLSEPGLVKLGDFGSASI---------------------------- 164
Query: 822 AEPMRASNSFVGTEEYIAPEIIAGAGH---TSAVDWWALGILLYEMLYGYTPFRGKTRQK 878
M +NSFVGT ++APE+I VD W+LGI E+ P
Sbjct: 165 ---MAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 221
Query: 879 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
+I + S S + + + L + P+ R + + KH F
Sbjct: 222 ALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRP----TSEVLLKHRFVL 271
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 178 bits (452), Expect = 3e-50
Identities = 63/343 (18%), Positives = 110/343 (32%), Gaps = 103/343 (30%)
Query: 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------MLNRN 711
++ F I LG+G+ G V V SG A K + + +L+
Sbjct: 2 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 61
Query: 712 K------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEY 759
+ + + ++ GG L +L + + E + + V+ L Y
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTY 119
Query: 760 LH-CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNP 818
L I++RD+KP N+L+ G + L DF +S
Sbjct: 120 LREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL------------------------ 155
Query: 819 VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878
+NSFVGT Y++PE + G ++ D W++G+ L EM G P ++
Sbjct: 156 -----IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
Query: 879 TFANILHKDLKFPSSTPT------------------------------------------ 896
+ + TP
Sbjct: 211 LELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVF 270
Query: 897 SLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 939
SL + + + L ++P R ++ H F K + V
Sbjct: 271 SLEFQDFVNKCLIKNPAERA----DLKQLMVHAFIKRSDAEEV 309
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 178 bits (452), Expect = 5e-50
Identities = 99/334 (29%), Positives = 145/334 (43%), Gaps = 71/334 (21%)
Query: 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK------------ 712
L F IK LG+G G V LV+ SG ++AMK +DK ++ +
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 713 ---------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVAL 757
+++ ++ +Y GGE+F L R E RFYAA++V+
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTF 154
Query: 758 EYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQN 817
EYLH +IYRDLKPEN+L+ G++ +TDF +
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------------------------- 189
Query: 818 PVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877
+ + GT E +APEII G+ AVDWWALG+L+YEM GY PF
Sbjct: 190 -----RVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
Query: 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNW 936
+ + I+ ++FPS + K L+ LL D R G+ G N+IK H +F +W
Sbjct: 245 QIYEKIVSGKVRFPSHFSSD--LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 937 ALV--RCMNPP-------ELDAPLFATDTEKEYK 961
+ R + P D F E+E +
Sbjct: 303 IAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 336
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 174 bits (441), Expect = 3e-49
Identities = 76/323 (23%), Positives = 127/323 (39%), Gaps = 73/323 (22%)
Query: 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK----------- 712
E ++ ++ + LGSG V +G +A K + K + +
Sbjct: 6 ENVD-DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV 64
Query: 713 -------------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEV 753
KT V LI + GGELF L + + L E+ + ++
Sbjct: 65 SILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQI 122
Query: 754 VVALEYLHCQGIIYRDLKPENVLLQGNG----HVSLTDFDLSCLTSCKPQLLLPTTNEKK 809
+ + YLH I + DLKPEN++L + + DF L+
Sbjct: 123 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----------------- 165
Query: 810 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYT 869
+ + GT E++APEI+ D W++G++ Y +L G +
Sbjct: 166 -----------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 214
Query: 870 PFRGKTRQKTFANILHKDLKFPSSTP--TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927
PF G T+Q+T AN+ + +F TS AK + RLL +DPK R+ + +
Sbjct: 215 PFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM----TIQDSLQ 270
Query: 928 HPFFKGVNW--ALVRCMNPPELD 948
HP+ K + AL + P+ +
Sbjct: 271 HPWIKPKDTQQALSSAWSHPQFE 293
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 174 bits (442), Expect = 6e-49
Identities = 62/290 (21%), Positives = 113/290 (38%), Gaps = 60/290 (20%)
Query: 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-----------MLNRNK------ 712
+ + LG G+ G VH S + + K + +LN +
Sbjct: 6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILH 65
Query: 713 ------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGII 766
+ + +I ++ G ++F ++ + L E + Y +V AL++LH I
Sbjct: 66 LHESFESMEELVMIFEFISGLDIFERINTSAFE-LNEREIVSYVHQVCEALQFLHSHNIG 124
Query: 767 YRDLKPENVLLQ--GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEP 824
+ D++PEN++ Q + + + +F +
Sbjct: 125 HFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF------------------------ 160
Query: 825 MRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANIL 884
EY APE+ ++A D W+LG L+Y +L G PF +T Q+ NI+
Sbjct: 161 ----RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIM 216
Query: 885 HKDLKFPSSTPT--SLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
+ + F S+ A + RLL ++ KSR+ A+E +HP+ K
Sbjct: 217 NAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRM----TASEALQHPWLK 262
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 172 bits (437), Expect = 8e-49
Identities = 51/304 (16%), Positives = 103/304 (33%), Gaps = 70/304 (23%)
Query: 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDK------------------ 704
G + + + +G G +V+ + A +
Sbjct: 3 GMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEML 62
Query: 705 ------------GVMLNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAE 752
+ K K + L+T+ G L L R KV+K +R + +
Sbjct: 63 KGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQ 120
Query: 753 VVVALEYLHCQG--IIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 809
++ L++LH + II+RDLK +N+ + G G V + D L+ L
Sbjct: 121 ILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL---------------- 164
Query: 810 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYT 869
+ + + +GT E++APE+ + +VD +A G+ + EM
Sbjct: 165 -------------KRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEY 210
Query: 870 PFRGK-TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928
P+ + + + K+++ + ++ R ++ H
Sbjct: 211 PYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERY----SIKDLLNH 266
Query: 929 PFFK 932
FF+
Sbjct: 267 AFFQ 270
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 167 bits (424), Expect = 2e-46
Identities = 58/291 (19%), Positives = 101/291 (34%), Gaps = 65/291 (22%)
Query: 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR------------------------ 710
+ LG G G V + + + FA+K + R
Sbjct: 18 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENL 77
Query: 711 NKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 770
+ + ++ + GGELF + + + E + A++YLH I +RD+
Sbjct: 78 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 137
Query: 771 KPENVLL---QGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRA 827
KPEN+L + N + LTDF + +
Sbjct: 138 KPENLLYTSKRPNAILKLTDFGFAK----------------------------ETTSHNS 169
Query: 828 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK- 886
+ T Y+APE++ + + D W+LG+++Y +L GY PF + +
Sbjct: 170 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 229
Query: 887 -----DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
+ P + S K L+ LL +P R+ E HP+
Sbjct: 230 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM----TITEFMNHPWIM 276
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 158 bits (401), Expect = 6e-44
Identities = 54/282 (19%), Positives = 99/282 (35%), Gaps = 61/282 (21%)
Query: 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK------------- 712
I + +GSG G+V+ + G A+K ++ +
Sbjct: 5 IPDGQITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 713 ------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYL 760
T + ++T +C G L+ L TK + + A + ++YL
Sbjct: 62 RHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYL 120
Query: 761 HCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVF 820
H + II+RDLK N+ L + V + DF L+ + S
Sbjct: 121 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS------------------------- 155
Query: 821 MAEPMRASNSFVGTEEYIAPEIIAGAG---HTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877
G+ ++APE+I ++ D +A GI+LYE++ G P+ +
Sbjct: 156 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 215
Query: 878 KTFANILHKDLKFPSSTPTSLH----AKQLMYRLLHRDPKSR 915
++ + P + + K+LM L + R
Sbjct: 216 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 257
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 158 bits (400), Expect = 7e-44
Identities = 50/282 (17%), Positives = 97/282 (34%), Gaps = 59/282 (20%)
Query: 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDK------------------------- 704
+ + LG G VHL + A+K +
Sbjct: 8 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 67
Query: 705 ------GVMLNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALE 758
++ +Y G L ++ + + A+ AL
Sbjct: 68 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALN 125
Query: 759 YLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNP 818
+ H GII+RD+KP N+++ V + DF ++ +
Sbjct: 126 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN------------------- 166
Query: 819 VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878
+ + + +GT +Y++PE G + D ++LG +LYE+L G PF G +
Sbjct: 167 -----SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 221
Query: 879 TFANILHKDLKFPSSTPTSL--HAKQLMYRLLHRDPKSRLGS 918
+ +D PS+ L ++ + L ++P++R +
Sbjct: 222 VAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQT 263
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 157 bits (397), Expect = 2e-43
Identities = 60/299 (20%), Positives = 99/299 (33%), Gaps = 76/299 (25%)
Query: 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK----------------- 712
++ LGSG GSV+ A+K ++K + + +
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 713 ---------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVAL 757
LI + + + L+E+ R + +V+ A+
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAV 123
Query: 758 EYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQ 816
+ H G+++RD+K EN+L+ N G + L DF L
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----------------- 166
Query: 817 NPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS-AVDWWALGILLYEMLYGYTPFRGKT 875
F GT Y PE I + + W+LGILLY+M+ G PF
Sbjct: 167 ------------TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 214
Query: 876 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934
I+ + F + + L+ L P R EI+ HP+ + V
Sbjct: 215 ------EIIRGQVFFRQRVSSE--CQHLIRWCLALRPSDRP----TFEEIQNHPWMQDV 261
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 155 bits (392), Expect = 7e-43
Identities = 55/293 (18%), Positives = 101/293 (34%), Gaps = 60/293 (20%)
Query: 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK---------- 712
G +N++ + ++ +G G+ G V L + G A+K +
Sbjct: 1 GWALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLAEASVMTQLR 58
Query: 713 -------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEY 759
K + ++T+Y G L L + VL D + ++ +V A+EY
Sbjct: 59 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 118
Query: 760 LHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPV 819
L ++RDL NVL+ + ++DF L+ S
Sbjct: 119 LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---------------------- 156
Query: 820 FMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQK 878
++ ++ APE + ++ D W+ GILL+E+ +G P+ +
Sbjct: 157 --------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD 208
Query: 879 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN---EIKKH 928
+ K K + ++M H D R + IK H
Sbjct: 209 VVPRVE-KGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 260
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 152 bits (384), Expect = 9e-42
Identities = 55/291 (18%), Positives = 96/291 (32%), Gaps = 58/291 (19%)
Query: 675 KPLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNK-------------------- 712
K LGSG+ G+V + A+K + K
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 72
Query: 713 -----TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIY 767
L+ + G L L + +K+ + +V + ++YL ++
Sbjct: 73 MIGICEAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEESNFVH 130
Query: 768 RDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRA 827
RDL NVLL + ++DF LS +A
Sbjct: 131 RDLAARNVLLVTQHYAKISDFGLSKALRADEN------------------------YYKA 166
Query: 828 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILH- 885
++ APE I +S D W+ G+L++E YG P+RG + A +
Sbjct: 167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 226
Query: 886 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936
+ + P+ P + LM D ++R G ++ ++ VN
Sbjct: 227 ERMGCPAGCPREM--YDLMNLCWTYDVENRPGFAA-VELRLRNYYYDVVNE 274
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 151 bits (382), Expect = 1e-40
Identities = 73/344 (21%), Positives = 120/344 (34%), Gaps = 89/344 (25%)
Query: 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN------------------- 711
+ K +G+G G V+ +LC SG+ A+K + +
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 712 -------KTKTHVCLITDYCPGGELFLLLDR-QPTKVLKEDAVRFYAAEVVVALEYLHCQ 763
K + ++ L+ DY P + + + L V+ Y ++ +L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 764 GIIYRDLKPENVLLQGNGHVS-LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 822
GI +RD+KP+N+LL + V L DF +
Sbjct: 142 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--------------------------- 174
Query: 823 EPMRASNSFVGTEEYIAP-EIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881
+ S++ + Y AP I +TS++D W+ G +L E+L G F G +
Sbjct: 175 -RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
Query: 882 NIL-----------------HKDLKFPSSTP----------TSLHAKQLMYRLLHRDPKS 914
I+ + + KFP T A L RLL P +
Sbjct: 234 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 293
Query: 915 RLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDTEK 958
RL E H FF + V+ N + LF T++
Sbjct: 294 RL----TPLEACAHSFFDELRDPNVKLPNGRDTP-ALFNFTTQE 332
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 147 bits (372), Expect = 3e-40
Identities = 55/274 (20%), Positives = 96/274 (35%), Gaps = 53/274 (19%)
Query: 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN-------------- 711
I+ + +K LG+G G V + G A+K + +G M
Sbjct: 1 IDPKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE 59
Query: 712 ---------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC 762
+ + +IT+Y G L L + + + +V A+EYL
Sbjct: 60 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLES 118
Query: 763 QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 822
+ ++RDL N L+ G V ++DF LS +
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRY--------------------------VLD 152
Query: 823 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFA 881
+ +S + PE++ + +S D WA G+L++E+ G P+ T +T
Sbjct: 153 DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 212
Query: 882 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+I + L+ S +MY H R
Sbjct: 213 HIA-QGLRLYRPHLASEKVYTIMYSCWHEKADER 245
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 147 bits (373), Expect = 3e-40
Identities = 52/280 (18%), Positives = 83/280 (29%), Gaps = 55/280 (19%)
Query: 666 INLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKTKT------- 715
I + R ++ LG G G V E G A+K + V+
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 716 -------------------HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVA 756
+ ++T+ P G L L + + YA +V
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAVQVAEG 123
Query: 757 LEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQ 816
+ YL + I+RDL N+LL V + DF L
Sbjct: 124 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN------------------- 164
Query: 817 NPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKT 875
+ + APE + + A D W G+ L+EM YG P+ G
Sbjct: 165 -----DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN 219
Query: 876 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+ I + + P +M + P+ R
Sbjct: 220 GSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDR 259
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 148 bits (374), Expect = 4e-40
Identities = 62/328 (18%), Positives = 115/328 (35%), Gaps = 93/328 (28%)
Query: 669 QHFRPIKPLGSGDTGSVHLV-ELCGSGQYFAMKAMDKGVM-------------------- 707
Q + + +G G G V +L G++ A+K +
Sbjct: 7 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 66
Query: 708 --------------LNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEV 753
++R +T + L+ ++ LD+ P + + ++ ++
Sbjct: 67 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT-YLDKVPEPGVPTETIKDMMFQL 125
Query: 754 VVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 813
+ L++LH +++RDLKP+N+L+ +G + L DF L+ + S
Sbjct: 126 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS------------------ 167
Query: 814 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 873
A S V T Y APE++ + + + VD W++G + EM FRG
Sbjct: 168 ----------FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG 217
Query: 874 KTRQKTFANILH-----------KDLKFPSS--------------TPTSLHAKQLMYRLL 908
+ IL +D+ P T K L+ + L
Sbjct: 218 SSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCL 277
Query: 909 HRDPKSRLGSHEGANEIKKHPFFKGVNW 936
+P R+ A HP+F+ +
Sbjct: 278 TFNPAKRI----SAYSALSHPYFQDLER 301
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 147 bits (372), Expect = 7e-40
Identities = 65/327 (19%), Positives = 99/327 (30%), Gaps = 89/327 (27%)
Query: 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK--------------------- 712
+ LG G +V+ + Q A+K + G
Sbjct: 3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNI 62
Query: 713 --------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG 764
K+++ L+ D+ ++ D VL ++ Y + LEYLH
Sbjct: 63 IGLLDAFGHKSNISLVFDFMETDLEVIIKDNS--LVLTPSHIKAYMLMTLQGLEYLHQHW 120
Query: 765 IIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEP 824
I++RDLKP N+LL NG + L DF L+ P
Sbjct: 121 ILHRDLKPNNLLLDENGVLKLADFGLAK---------------------------SFGSP 153
Query: 825 MRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883
RA V T Y APE++ GA + VD WA+G +L E+L G + I
Sbjct: 154 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRI 213
Query: 884 LHKDLKFPSST--------------------------PTSLHAKQLMYRLLHRDPKSRLG 917
L+ L +P +R+
Sbjct: 214 FETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARI- 272
Query: 918 SHEGANEIKKHPFFKGVNWALVRCMNP 944
A + K +F C P
Sbjct: 273 ---TATQALKMKYFSNRPGPTPGCQLP 296
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 147 bits (371), Expect = 7e-40
Identities = 53/292 (18%), Positives = 96/292 (32%), Gaps = 57/292 (19%)
Query: 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN-------------- 711
I + R LG G G V + G+ + A+K + G M
Sbjct: 14 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQVMKKLRHE 72
Query: 712 --------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ 763
++ + ++T+Y G L L + K L+ + AA++ + Y+
Sbjct: 73 KLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 132
Query: 764 GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAE 823
++RDL+ N+L+ N + DF L+ L
Sbjct: 133 NYVHRDLRAANILVGENLVCKVADFGLARL--------------------------IEDN 166
Query: 824 PMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFAN 882
A ++ APE T D W+ GILL E+ G P+ G ++
Sbjct: 167 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 226
Query: 883 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK--HPFFK 932
+ + + P LM + ++P+ R ++ +F
Sbjct: 227 VE-RGYRMPCPPECPESLHDLMCQCWRKEPEERP----TFEYLQAFLEDYFT 273
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 146 bits (369), Expect = 1e-39
Identities = 51/284 (17%), Positives = 90/284 (31%), Gaps = 56/284 (19%)
Query: 677 LGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNK---------------------- 712
LG G+ GSV A+K + +G +
Sbjct: 17 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 76
Query: 713 --TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 770
+ L+ + GG L L + + V +V + ++YL + ++RDL
Sbjct: 77 VCQAEALMLVMEMAGGGPLHKFL-VGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDL 135
Query: 771 KPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNS 830
NVLL + ++DF LS + +
Sbjct: 136 AARNVLLVNRHYAKISDFGLSKALGADDSYYTARS------------------------A 171
Query: 831 FVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILH-KDL 888
++ APE I +S D W+ G+ ++E L YG P++ + A I K +
Sbjct: 172 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM 231
Query: 889 KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
+ P P L LM + R + + ++
Sbjct: 232 ECPPECPPEL--YALMSDCWIYKWEDRPDFLT-VEQRMRACYYS 272
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 145 bits (366), Expect = 2e-39
Identities = 62/314 (19%), Positives = 108/314 (34%), Gaps = 72/314 (22%)
Query: 644 KPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMD 703
KP +D W ++ + + ++ LG+G G V + G A+K++
Sbjct: 1 KPWWEDE--W-----------EVPRETLKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLK 46
Query: 704 KGVMLNRN----------------------KTKTHVCLITDYCPGGELFLLLDRQPTKVL 741
+G M T+ + +IT+Y G L L L
Sbjct: 47 QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKL 106
Query: 742 KEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801
+ + AA++ + ++ + I+RDL+ N+L+ + DF L+ L
Sbjct: 107 TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL-------- 158
Query: 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 861
A ++ APE I T D W+ GILL
Sbjct: 159 ------------------IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 862 YEML-YGYTPFRGKTRQKTFANILH-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH 919
E++ +G P+ G T + N+ + P + P L QLM P+ R
Sbjct: 201 TEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL--YQLMRLCWKERPEDRP--- 255
Query: 920 EGANEIKK--HPFF 931
+ ++ FF
Sbjct: 256 -TFDYLRSVLEDFF 268
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 143 bits (362), Expect = 1e-38
Identities = 62/321 (19%), Positives = 106/321 (33%), Gaps = 84/321 (26%)
Query: 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKG---------------------- 705
+++F+ ++ +G G G V+ +G+ A+K +
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 706 ---VMLNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC 762
V L + + +L +D + ++ Y +++ L + H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 763 QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 822
+++RDLKP+N+L+ G + L DF L+
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLAR---------------------------AFG 153
Query: 823 EPMRASNSFVGTEEYIAPEIIAGAGHTS-AVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881
P+R V T Y APEI+ G + S AVD W+LG + EM+ F G +
Sbjct: 154 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
Query: 882 NILHKDLKFPSST---------------------------PTSLHAKQLMYRLLHRDPKS 914
I P + L+ ++LH DP
Sbjct: 214 RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 273
Query: 915 RLGSHEGANEIKKHPFFKGVN 935
R+ A HPFF+ V
Sbjct: 274 RI----SAKAALAHPFFQDVT 290
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 143 bits (361), Expect = 4e-38
Identities = 53/303 (17%), Positives = 93/303 (30%), Gaps = 78/303 (25%)
Query: 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ-----YFAMKAMDKGVMLNRNK-------- 712
++ K LGSG G V G + A+K + + + +
Sbjct: 34 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKM 93
Query: 713 ------------------TKTHVCLITDYCPGGELFLLLDRQPTK--------------- 739
+ LI +YC G+L L + K
Sbjct: 94 MTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLE 153
Query: 740 ------VLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793
VL + + +A +V +E+L + ++RDL NVL+ V + DF L+
Sbjct: 154 EEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARD 213
Query: 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVD 853
++ +++APE + +T D
Sbjct: 214 IMSDSNYVVRGN-------------------------ARLPVKWMAPESLFEGIYTIKSD 248
Query: 854 WWALGILLYEML-YGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDP 912
W+ GILL+E+ G P+ G F ++ K + +M D
Sbjct: 249 VWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDS 308
Query: 913 KSR 915
+ R
Sbjct: 309 RKR 311
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 141 bits (355), Expect = 1e-37
Identities = 57/298 (19%), Positives = 103/298 (34%), Gaps = 56/298 (18%)
Query: 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGVMLNRNK-------- 712
++I++ + + +G+G+ G V L G+ + A+K + G + +
Sbjct: 21 KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASI 80
Query: 713 -----------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVV 755
T V +IT++ G L RQ + +
Sbjct: 81 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSF-LRQNDGQFTVIQLVGMLRGIAA 139
Query: 756 ALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQ 815
++YL ++RDL N+L+ N ++DF LS
Sbjct: 140 GMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD--------------- 184
Query: 816 QNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGK 874
++ + APE I TSA D W+ GI+++E++ YG P+
Sbjct: 185 -------PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 237
Query: 875 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN---EIKKHP 929
T Q I +D + P QLM +D R + N ++ ++P
Sbjct: 238 TNQDVINAIE-QDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNP 294
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 140 bits (354), Expect = 2e-37
Identities = 57/328 (17%), Positives = 95/328 (28%), Gaps = 94/328 (28%)
Query: 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR------------------- 710
+ + +G G G V +GQ A+K +
Sbjct: 11 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 70
Query: 711 ---------------NKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVV 755
N+ K + L+ D+C LL + ++ ++
Sbjct: 71 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL--VKFTLSEIKRVMQMLLN 128
Query: 756 ALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQ 815
L Y+H I++RD+K NVL+ +G + L DF L+ S
Sbjct: 129 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN---------------- 172
Query: 816 QNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGK 874
+ V T Y PE++ G + +D W G ++ EM +G
Sbjct: 173 -------SQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 225
Query: 875 TRQKTFANILHKDLKFPSSTP------------------------------TSLHAKQLM 904
T Q A I +A L+
Sbjct: 226 TEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLI 285
Query: 905 YRLLHRDPKSRLGSHEGANEIKKHPFFK 932
+LL DP R+ +++ H FF
Sbjct: 286 DKLLVLDPAQRI----DSDDALNHDFFW 309
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 138 bits (349), Expect = 3e-37
Identities = 44/273 (16%), Positives = 91/273 (33%), Gaps = 51/273 (18%)
Query: 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN-------------- 711
I+ ++ +GSG G VHL + A+K + +G M +
Sbjct: 2 IDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHP 60
Query: 712 ---------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC 762
+ +CL+ ++ G L R + + + +V + YL
Sbjct: 61 KLVQLYGVCLEQAPICLVFEFMEHGCLSDY-LRTQRGLFAAETLLGMCLDVCEGMAYLEE 119
Query: 763 QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 822
+I+RDL N L+ N + ++DF ++ +
Sbjct: 120 ACVIHRDLAARNCLVGENQVIKVSDFGMTRF--------------------------VLD 153
Query: 823 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 882
+ +S ++ +PE+ + + ++S D W+ G+L++E+
Sbjct: 154 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 213
Query: 883 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+ + S H Q+M P+ R
Sbjct: 214 DISTGFRLYKPRLASTHVYQIMNHCWKERPEDR 246
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 140 bits (354), Expect = 3e-37
Identities = 63/361 (17%), Positives = 118/361 (32%), Gaps = 102/361 (28%)
Query: 638 SKVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYF 697
++V + W +++ G N ++ ++ LG G V + +
Sbjct: 7 ARVYTDVNTHRPREYWDYESHVVEWG---NQDDYQLVRKLGRGKYSEVFEAINITNNEKV 63
Query: 698 AMKAMDKG----------VMLN--------------RNKTKTHVCLITDYCPGGELFLLL 733
+K + ++ N ++ L+ ++ + L
Sbjct: 64 VVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY 123
Query: 734 DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSC 792
L + +RFY E++ AL+Y H GI++RD+KP NV++ + + L D+ L+
Sbjct: 124 QT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 178
Query: 793 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSA 851
P + N V + + PE++ + +
Sbjct: 179 ----------------------------FYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 210
Query: 852 VDWWALGILLYEMLYGYTPFR-GKTRQKTFANI-----------------LHKDLKFPSS 893
+D W+LG +L M++ PF G I + D +F
Sbjct: 211 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 270
Query: 894 TPT------------------SLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 935
S A + +LL D +SRL A E +HP+F V
Sbjct: 271 LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLT----AREAMEHPYFYTVV 326
Query: 936 W 936
Sbjct: 327 K 327
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 138 bits (349), Expect = 6e-37
Identities = 50/274 (18%), Positives = 83/274 (30%), Gaps = 49/274 (17%)
Query: 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN------------- 711
++ LG G G V+ A+K + + M
Sbjct: 13 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 72
Query: 712 ----------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH 761
+ +IT++ G L L + + + + A ++ A+EYL
Sbjct: 73 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 132
Query: 762 CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFM 821
+ I+RDL N L+ N V + DF LS L
Sbjct: 133 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL--------------------------MT 166
Query: 822 AEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881
+ A ++ APE +A + D WA G+LL+E+
Sbjct: 167 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 226
Query: 882 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+L KD + +LM +P R
Sbjct: 227 ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDR 260
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 136 bits (342), Expect = 6e-36
Identities = 53/305 (17%), Positives = 93/305 (30%), Gaps = 81/305 (26%)
Query: 665 QINLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNK------- 712
+ + ++ +G G G V G A+K + + +
Sbjct: 9 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 68
Query: 713 ------------------TKTHVCLITDYCPGGELFLLLDRQ------------------ 736
+CL+ +Y G+L L
Sbjct: 69 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 128
Query: 737 ----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 792
L A +V + YL + ++RDL N L+ N V + DF LS
Sbjct: 129 VSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSR 188
Query: 793 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAV 852
++ A+ +A + ++ PE I +T+
Sbjct: 189 N-------------------------IYSADYYKADGNDAIPIRWMPPESIFYNRYTTES 223
Query: 853 DWWALGILLYEML-YGYTPFRGKTRQKTFANILHKD-LKFPSSTPTSLHAKQLMYRLLHR 910
D WA G++L+E+ YG P+ G ++ + + L P + P L LM +
Sbjct: 224 DVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLEL--YNLMRLCWSK 281
Query: 911 DPKSR 915
P R
Sbjct: 282 LPADR 286
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 136 bits (343), Expect = 1e-35
Identities = 60/349 (17%), Positives = 111/349 (31%), Gaps = 90/349 (25%)
Query: 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDK------------------------- 704
+ + +G G G V + A+K +
Sbjct: 9 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 68
Query: 705 ----GVMLNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYL 760
++ + + + G +L+ LL Q L D + ++ +++ L+Y+
Sbjct: 69 IGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH---LSNDHICYFLYQILRGLKYI 125
Query: 761 HCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVF 820
H +++RDLKP N+LL + + DF L+ +
Sbjct: 126 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH---------------------- 163
Query: 821 MAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879
+ +V T Y APEI+ G+T ++D W++G +L EML F GK
Sbjct: 164 --DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 221
Query: 880 FANIL--------------------HKDLKFPSSTPTSLH---------AKQLMYRLLHR 910
+IL + L P + A L+ ++L
Sbjct: 222 LNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTF 281
Query: 911 DPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDTEKE 959
+P R+ + HP+ + + + D KE
Sbjct: 282 NPHKRI----EVEQALAHPYLEQYYDPSDEPIAEAPFKFDMELDDLPKE 326
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 133 bits (334), Expect = 6e-35
Identities = 42/278 (15%), Positives = 83/278 (29%), Gaps = 52/278 (18%)
Query: 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV----------MLNRNKTKTHVCL 719
H++ + +G G G + + Q A+K + T +
Sbjct: 6 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPN 65
Query: 720 ITDYCPGGELFLL-----------LDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYR 768
+ + G +L L + V A +++ ++ +H + ++YR
Sbjct: 66 VYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYR 125
Query: 769 DLKPENVLL-----QGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAE 823
D+KP+N L+ + + + DF +
Sbjct: 126 DIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR--------------------DPVTKQHI 165
Query: 824 PMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883
P R + GT Y++ G + D ALG + L G P++G
Sbjct: 166 PYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKY 225
Query: 884 LHKDLKFPSSTPTSLHA------KQLMYRLLHRDPKSR 915
K S+ L A + M+ + +
Sbjct: 226 ERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDAT 263
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 131 bits (331), Expect = 2e-34
Identities = 44/295 (14%), Positives = 89/295 (30%), Gaps = 55/295 (18%)
Query: 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR------------------- 710
+R + +GSG G ++L +G+ A+K +
Sbjct: 8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPT 67
Query: 711 ----NKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGII 766
+ ++ + L ++ V A +++ +EY+H + I
Sbjct: 68 IRWCGAEGDYNVMVMELLGPSLEDL--FNFCSRKFSLKTVLLLADQMISRIEYIHSKNFI 125
Query: 767 YRDLKPENVLLQ---GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAE 823
+RD+KP+N L+ V + DF L+ K +
Sbjct: 126 HRDVKPDNFLMGLGKKGNLVYIIDFGLAK--------------------KYRDARTHQHI 165
Query: 824 PMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883
P R + + GT Y + G + D +LG +L G P++G
Sbjct: 166 PYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKY 225
Query: 884 LHKDLKFPSSTPTSLH------AKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932
K S+ L + + + ++ ++ F +
Sbjct: 226 ERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKP-DYSYLRQLFRNLFHR 279
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 132 bits (332), Expect = 2e-34
Identities = 53/307 (17%), Positives = 90/307 (29%), Gaps = 73/307 (23%)
Query: 657 QKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRN 711
Q D + K LG+G G V G + A+K + L
Sbjct: 11 QLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER 70
Query: 712 K--------------------------TKTHVCLITDYCPGGELFLLLDRQ--------- 736
+ +IT+YC G+L L R+
Sbjct: 71 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 130
Query: 737 -------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 789
L + + ++ +V + +L + I+RDL N+LL + DF
Sbjct: 131 SPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFG 190
Query: 790 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT 849
L+ + +++APE I +T
Sbjct: 191 LARDIKND-------------------------SNYVVKGNARLPVKWMAPESIFNCVYT 225
Query: 850 SAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLL 908
D W+ GI L+E+ G +P+ G F ++ + + S +M
Sbjct: 226 FESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCW 285
Query: 909 HRDPKSR 915
DP R
Sbjct: 286 DADPLKR 292
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 131 bits (329), Expect = 3e-34
Identities = 57/318 (17%), Positives = 111/318 (34%), Gaps = 84/318 (26%)
Query: 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKG--------------VMLNRNKT 713
+Q + ++ +G G G+V + + + A+K + +L K
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 714 KTHVCLITDYCPGGELFLLLDRQPTKVLK----------EDAVRFYAAEVVVALEYLHCQ 763
K V L +L L+ + + K + V+ + +++ L + H +
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120
Query: 764 GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAE 823
+++RDLKP+N+L+ NG + L +F L+
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLANFGLARA---------------------------FGI 153
Query: 824 PMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTP-FRGKTRQKTFA 881
P+R ++ V T Y P+++ GA +++++D W+ G + E+ P F G
Sbjct: 154 PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLK 213
Query: 882 NILHKDLKFPSSTPTSLH---------------------------AKQLMYRLLHRDPKS 914
I S+ + L+ LL +P
Sbjct: 214 RIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQ 273
Query: 915 RLGSHEGANEIKKHPFFK 932
R+ A E +HP+F
Sbjct: 274 RI----SAEEALQHPYFS 287
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 131 bits (329), Expect = 3e-34
Identities = 53/319 (16%), Positives = 110/319 (34%), Gaps = 88/319 (27%)
Query: 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--------------------- 706
++ + ++ +G G G V+ + G+ FA+K +
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 707 -----MLNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH 761
+ + TK + L+ ++ LL + L+ + + +++ + Y H
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCH 117
Query: 762 CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFM 821
+ +++RDLKP+N+L+ G + + DF L+
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLAR---------------------------AF 150
Query: 822 AEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880
P+R + T Y AP+++ G+ +++ +D W++G + EM+ G F G +
Sbjct: 151 GIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQL 210
Query: 881 ANILHKDLKFPSSTP---------------------------TSLHAKQLMYRLLHRDPK 913
I S L+ ++L DP
Sbjct: 211 MRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPN 270
Query: 914 SRLGSHEGANEIKKHPFFK 932
R+ A + +H +FK
Sbjct: 271 QRI----TAKQALEHAYFK 285
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 131 bits (331), Expect = 3e-34
Identities = 69/344 (20%), Positives = 119/344 (34%), Gaps = 67/344 (19%)
Query: 655 AIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK-- 712
A+ +IL E F+ IK LGSG G+V+ G+ + K + +
Sbjct: 1 ALLRILKETE------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 54
Query: 713 --------------------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAV 746
+ V LIT P G L + + +
Sbjct: 55 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI-GSQYL 113
Query: 747 RFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 806
+ ++ + YL + +++RDL NVL++ HV +TDF L+ L +
Sbjct: 114 LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE--------- 164
Query: 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML- 865
E + +++A E I +T D W+ G+ ++E++
Sbjct: 165 ----------------EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
Query: 866 YGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE- 924
+G P+ G + +IL K + P ++ +M + D SR E E
Sbjct: 209 FGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEF 267
Query: 925 --IKKHPFFKGVNWALVRCMNPPELDAPLFA--TDTEKEYKVVD 964
+ + P V R P D+ + D E VVD
Sbjct: 268 SKMARDPQRYLVIQGDERMHLPSPTDSNFYRALMDEEDMDDVVD 311
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 131 bits (329), Expect = 4e-34
Identities = 55/311 (17%), Positives = 103/311 (33%), Gaps = 76/311 (24%)
Query: 665 QINLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNK------- 712
+ + KPLG G G V + G + + A+K + +G + ++
Sbjct: 9 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 68
Query: 713 --------------------TKTHVCLITDYCPGGELFLLLDRQ--------------PT 738
+ +I ++C G L L +
Sbjct: 69 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 128
Query: 739 KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798
L + + Y+ +V +E+L + I+RDL N+LL V + DF L+
Sbjct: 129 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD----- 183
Query: 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALG 858
++ +++APE I +T D W+ G
Sbjct: 184 --------------------IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 223
Query: 859 ILLYEMLYGY-TPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLG 917
+LL+E+ +P+ G + F L + + + T+ Q M H +P R
Sbjct: 224 VLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP- 282
Query: 918 SHEGANEIKKH 928
+E+ +H
Sbjct: 283 ---TFSELVEH 290
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 129 bits (324), Expect = 8e-34
Identities = 63/292 (21%), Positives = 99/292 (33%), Gaps = 62/292 (21%)
Query: 666 INLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNK---------- 712
I + + +G G G VH A+K + +
Sbjct: 4 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMR 63
Query: 713 --------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALE 758
T+ V +I + C GEL L + L ++ YA ++ AL
Sbjct: 64 QFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALA 122
Query: 759 YLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNP 818
YL + ++RD+ NVL+ N V L DF LS
Sbjct: 123 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME----------------------- 159
Query: 819 VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQ 877
++ +++APE I TSA D W G+ ++E+L +G PF+G
Sbjct: 160 ---DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 216
Query: 878 KTFANILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928
I + + L P + P +L LM + DP R E+K
Sbjct: 217 DVIGRIENGERLPMPPNCPPTL--YSLMTKCWAYDPSRRP----RFTELKAQ 262
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 129 bits (325), Expect = 1e-33
Identities = 50/294 (17%), Positives = 93/294 (31%), Gaps = 72/294 (24%)
Query: 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYF--AMKAMDKGVMLNRNK---------- 712
++ + +G G+ G V + G A+K M + + ++
Sbjct: 6 VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLC 65
Query: 713 ----------------TKTHVCLITDYCPGGELFLLL--------------DRQPTKVLK 742
+ ++ L +Y P G L L L
Sbjct: 66 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 125
Query: 743 EDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802
+ +AA+V ++YL + I+RDL N+L+ N + DF LS
Sbjct: 126 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS----------- 174
Query: 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 862
E ++A E + + +T+ D W+ G+LL+
Sbjct: 175 -----------------RGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLW 217
Query: 863 EML-YGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
E++ G TP+ G T + + + + + LM + P R
Sbjct: 218 EIVSLGGTPYCGMTCAELYEKLP-QGYRLEKPLNCDDEVYDLMRQCWREKPYER 270
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 127 bits (320), Expect = 5e-33
Identities = 56/299 (18%), Positives = 95/299 (31%), Gaps = 76/299 (25%)
Query: 666 INLQHFRPIKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKG------------- 705
+ KPLG G G V L E G A+K +
Sbjct: 10 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 69
Query: 706 -------------VMLNRNKTKTHVCLITDYCPGGELFLLL--------------DRQPT 738
+L + +I +Y G L L P
Sbjct: 70 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 129
Query: 739 KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798
+ L + A +V +EYL + I+RDL NVL+ + + + DF L+
Sbjct: 130 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH--- 186
Query: 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALG 858
+ + + + +++APE + +T D W+ G
Sbjct: 187 ----------------------HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 224
Query: 859 ILLYEML-YGYTPFRGKTRQKTFANILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
+LL+E+ G +P+ G ++ F + + PS+ L +M H P R
Sbjct: 225 VLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNEL--YMMMRDCWHAVPSQR 281
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 127 bits (320), Expect = 2e-32
Identities = 62/368 (16%), Positives = 121/368 (32%), Gaps = 111/368 (30%)
Query: 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDK----------------------- 704
L+ ++ +KP+GSG G V + A+K + +
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 705 ---------GVMLNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVV 755
+ V L+ + ++ + + + +++
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-----HERMSYLLYQMLC 130
Query: 756 ALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQ 815
+++LH GII+RDLKP N++++ + + + DF L+ +
Sbjct: 131 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--------------- 175
Query: 816 QNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 875
+V T Y APE+I G G+ VD W++G ++ EM+ F G+
Sbjct: 176 -------------TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 222
Query: 876 RQKTFANIL---------------------------HKDLKFPSSTPTSLH--------- 899
+ ++ + L FP P SL
Sbjct: 223 YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKL 282
Query: 900 ----AKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLF--A 953
A+ L+ ++L DP R+ ++ +HP+ PP++
Sbjct: 283 KASQARDLLSKMLVIDPAKRI----SVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDER 338
Query: 954 TDTEKEYK 961
T +E+K
Sbjct: 339 EHTIEEWK 346
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 126 bits (317), Expect = 4e-32
Identities = 65/331 (19%), Positives = 113/331 (34%), Gaps = 100/331 (30%)
Query: 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------- 707
+R ++P+GSG G+V +G A+K + +
Sbjct: 18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHE 77
Query: 708 -----------LNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVA 756
T L+ + G +L L+ + L ED ++F +++
Sbjct: 78 NVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEK---LGEDRIQFLVYQMLKG 133
Query: 757 LEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQ 816
L Y+H GII+RDLKP N+ + + + + DF L+ +
Sbjct: 134 LRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE------------------- 174
Query: 817 NPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKT 875
+V T Y APE+I +T VD W++G ++ EM+ G T F+G
Sbjct: 175 -----------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD 223
Query: 876 RQKTFANILHKDLKFPSSTP-----------------------------TSLHAKQLMYR 906
I+ P+ S A L+ +
Sbjct: 224 HLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEK 283
Query: 907 LLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 937
+L D + R+ A E HP+F+ ++
Sbjct: 284 MLVLDAEQRV----TAGEALAHPYFESLHDT 310
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 123 bits (308), Expect = 2e-31
Identities = 48/312 (15%), Positives = 99/312 (31%), Gaps = 69/312 (22%)
Query: 666 INLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNK-------- 712
+ + + LG G G V+ G A+K +++ +
Sbjct: 17 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 76
Query: 713 -----------------TKTHVCLITDYCPGGELFLLL--------DRQPTKVLKEDAVR 747
+I + G+L L + +
Sbjct: 77 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 136
Query: 748 FYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 807
A E+ + YL+ ++RDL N ++ + V +
Sbjct: 137 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIG--------------------- 175
Query: 808 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-Y 866
G ++ + R + +++PE + T+ D W+ G++L+E+
Sbjct: 176 ----DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 231
Query: 867 GYTPFRGKTRQKTFANILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 925
P++G + ++ ++ L P + P L +LM +PK R E + I
Sbjct: 232 AEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDML--FELMRMCWQYNPKMRPSFLEIISSI 289
Query: 926 KK--HPFFKGVN 935
K+ P F+ V+
Sbjct: 290 KEEMEPGFREVS 301
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 120 bits (301), Expect = 1e-30
Identities = 47/280 (16%), Positives = 89/280 (31%), Gaps = 54/280 (19%)
Query: 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNK-------- 712
+I+ K +G+G+ G V+ L S A+K + G +
Sbjct: 3 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGI 62
Query: 713 -----------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVV 755
+ +IT+Y G R+ + +
Sbjct: 63 MGQFSHHNIIRLEGVISKYKPMMIITEYMENG-ALDKFLREKDGEFSVLQLVGMLRGIAA 121
Query: 756 ALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQ 815
++YL ++RDL N+L+ N ++DF LS + P+ T+
Sbjct: 122 GMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTS---------- 171
Query: 816 QNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 875
+ APE I+ TSA D W+ GI+++E++ +
Sbjct: 172 --------------GGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL 217
Query: 876 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 915
++ + P+ QLM + ++ R
Sbjct: 218 SNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARR 257
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 120 bits (302), Expect = 2e-30
Identities = 50/306 (16%), Positives = 105/306 (34%), Gaps = 60/306 (19%)
Query: 641 VHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELC---GSGQYF 697
VH + +A+Q ++ + + HF + +G G G V+ L G +
Sbjct: 2 VHIDLSALNPELVQAVQHVVIGPSSLIV-HFNEV--IGRGHFGCVYHGTLLDNDGKKIHC 58
Query: 698 AMKAMDKGVMLNRNK--------------------------TKTHVCLITDYCPGGELFL 731
A+K++++ + ++ ++ Y G+L
Sbjct: 59 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 118
Query: 732 LLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 791
+ + +D + F +V +++L + ++RDL N +L V + DF L+
Sbjct: 119 FIRNETHNPTVKDLIGF-GLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 177
Query: 792 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSA 851
K + + +++A E + T+
Sbjct: 178 RDMYDK-----------------------EFDSVHNKTGAKLPVKWMALESLQTQKFTTK 214
Query: 852 VDWWALGILLYEML-YGYTPFRGKTRQKTFANILH-KDLKFPSSTPTSLHAKQLMYRLLH 909
D W+ G+LL+E++ G P+ +L + L P P L ++M + H
Sbjct: 215 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL--YEVMLKCWH 272
Query: 910 RDPKSR 915
+ R
Sbjct: 273 PKAEMR 278
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 118 bits (296), Expect = 8e-30
Identities = 52/303 (17%), Positives = 93/303 (30%), Gaps = 89/303 (29%)
Query: 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDK---------------------------GVM 707
+ +G G G V + G+ A+K
Sbjct: 9 ESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 708 LNRNKTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ---- 763
N T T + L++DY G LF L+R + + + A L +LH +
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYT---VTVEGMIKLALSTASGLAHLHMEIVGT 123
Query: 764 ----GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPV 819
I +RDLK +N+L++ NG + D L+ +
Sbjct: 124 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI------------------ 165
Query: 820 FMAEPMRASNSFVGTEEYIAPEIIAGAGH------TSAVDWWALGILLYEMLYGYTPFRG 873
A N VGT+ Y+APE++ + + D +A+G++ +E+ +
Sbjct: 166 -----DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 220
Query: 874 KTRQKTFANILHK-----------------DLKFP---SSTPTSLHAKQLMYRLLHRDPK 913
+ L P S ++M + +
Sbjct: 221 HEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGA 280
Query: 914 SRL 916
+RL
Sbjct: 281 ARL 283
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 116 bits (291), Expect = 9e-29
Identities = 64/353 (18%), Positives = 115/353 (32%), Gaps = 98/353 (27%)
Query: 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKTKT-------------- 715
++ + P+GSG GSV +G A+K + + + +T
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 716 -----------------HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALE 758
+ + + G +L ++ Q L +D V+F +++ L+
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLK 135
Query: 759 YLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNP 818
Y+H II+RDLKP N+ + + + + DF L+ T +
Sbjct: 136 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------------------- 175
Query: 819 VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS-AVDWWALGILLYEMLYGYTPFRGKTRQ 877
+V T Y APEI+ H + VD W++G ++ E+L G T F G
Sbjct: 176 ----------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 225
Query: 878 KTFANILHKDLKFPSSTP-----------------------------TSLHAKQLMYRLL 908
IL + + A L+ ++L
Sbjct: 226 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 285
Query: 909 HRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDTEKEYK 961
D R+ A + H +F + + P + E+K
Sbjct: 286 VLDSDKRI----TAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWK 334
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 105 bits (262), Expect = 6e-25
Identities = 53/357 (14%), Positives = 102/357 (28%), Gaps = 114/357 (31%)
Query: 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN----------- 711
GE + ++ LG G +V L + + + AMK + +
Sbjct: 7 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRV 66
Query: 712 --------------------------KTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDA 745
++ G L L+ + + +
Sbjct: 67 NDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIY 126
Query: 746 VRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVS-LTDFDLSCLTSCKPQLLLP 803
V+ + ++++ L+Y+H + GII+ D+KPENVL++ L ++ L +
Sbjct: 127 VKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC------ 180
Query: 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE 863
+ + T EY +PE++ GA D W+ L++E
Sbjct: 181 -------------------WYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFE 221
Query: 864 MLYGYTPFRGKTRQKTFANILH-------------------------------------- 885
++ G F + H
Sbjct: 222 LITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKL 281
Query: 886 --------KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934
K+ S + + +L DP+ R A + HP+ K
Sbjct: 282 KFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA----DAGGLVNHPWLKDT 334
|
| >d1n9la_ d.110.3.6 (A:) Putative blue light receptor, phot-lov1 domain {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 109 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: Flavin-binding PAS domain domain: Putative blue light receptor, phot-lov1 domain species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 97.2 bits (241), Expect = 1e-24
Identities = 65/107 (60%), Positives = 86/107 (80%)
Query: 198 FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETL 257
+ TFVV+DAT PD P++YAS GF+ MTGY EV+G NCRFLQG GTDP++V KIR+ +
Sbjct: 2 LRHTFVVADATLPDCPLVYASEGFYAMTGYGPDEVLGHNCRFLQGEGTDPKEVQKIRDAI 61
Query: 258 QNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304
+ G++ RLLNY+KDGTPFWNLLT+ PIK +G+V KF+G+QV+V+
Sbjct: 62 KKGEACSVRLLNYRKDGTPFWNLLTVTPIKTPDGRVSKFVGVQVDVT 108
|
| >d1n9la_ d.110.3.6 (A:) Putative blue light receptor, phot-lov1 domain {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 109 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: Flavin-binding PAS domain domain: Putative blue light receptor, phot-lov1 domain species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 96.9 bits (240), Expect = 1e-24
Identities = 49/105 (46%), Positives = 67/105 (63%)
Query: 481 IEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAI 540
+ FV+ D LPD P+++AS+ F +T Y +E+LG NCRFLQG TDP V+KIR AI
Sbjct: 2 LRHTFVVADATLPDCPLVYASEGFYAMTGYGPDEVLGHNCRFLQGEGTDPKEVQKIRDAI 61
Query: 541 DNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLD 585
+V+L+NY K G FWNL + P++ G V F+GVQ+D
Sbjct: 62 KKGEACSVRLLNYRKDGTPFWNLLTVTPIKTPDGRVSKFVGVQVD 106
|
| >d1jnua_ d.110.3.6 (A:) Photoreceptor phy3 flavin-binding domain, lov2 {Maidenhair fern (Adiantum capillus-veneris) [TaxId: 13818]} Length = 104 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: Flavin-binding PAS domain domain: Photoreceptor phy3 flavin-binding domain, lov2 species: Maidenhair fern (Adiantum capillus-veneris) [TaxId: 13818]
Score = 92.7 bits (229), Expect = 4e-23
Identities = 75/103 (72%), Positives = 86/103 (83%)
Query: 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDN 542
K+FVITDPRLPDNPIIFASD FLELTEY+REE+LG NCRFLQG TD V+ IR A+
Sbjct: 1 KSFVITDPRLPDNPIIFASDRFLELTEYTREEVLGNNCRFLQGRGTDRKAVQLIRDAVKE 60
Query: 543 QTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLD 585
Q DVTVQ++NYTK G+ FWNLFHLQ MRD+ G+VQYFIGVQ +
Sbjct: 61 QRDVTVQVLNYTKGGRAFWNLFHLQVMRDENGDVQYFIGVQQE 103
|
| >d1jnua_ d.110.3.6 (A:) Photoreceptor phy3 flavin-binding domain, lov2 {Maidenhair fern (Adiantum capillus-veneris) [TaxId: 13818]} Length = 104 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: Flavin-binding PAS domain domain: Photoreceptor phy3 flavin-binding domain, lov2 species: Maidenhair fern (Adiantum capillus-veneris) [TaxId: 13818]
Score = 86.9 bits (214), Expect = 4e-21
Identities = 46/104 (44%), Positives = 69/104 (66%)
Query: 200 QTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQN 259
++FV++D PD PI++AS F ++T YT +EV+G NCRFLQG GTD + V IR+ ++
Sbjct: 1 KSFVITDPRLPDNPIIFASDRFLELTEYTREEVLGNNCRFLQGRGTDRKAVQLIRDAVKE 60
Query: 260 GQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEV 303
+ ++LNY K G FWNL + ++D+ G V FIG+Q E+
Sbjct: 61 QRDVTVQVLNYTKGGRAFWNLFHLQVMRDENGDVQYFIGVQQEM 104
|
| >d1bywa_ d.110.3.6 (A:) Erg potassium channel, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 110 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: Flavin-binding PAS domain domain: Erg potassium channel, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.8 bits (177), Expect = 4e-16
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Query: 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNC--RFLQGPETDPATVRKIRAAI 540
+ F+I + R+ + +I+ +D F EL YSR E++ R C FL GP T +I A+
Sbjct: 2 RKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPCTQRRAAAQIAQAL 61
Query: 541 DNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSE 588
+ V++ Y K G F L + P++++ G V FI E
Sbjct: 62 LGAEERKVEIAFYRKDGSCFLCLVDVVPVKNEDGAVIMFILNFEVVME 109
|
| >d1bywa_ d.110.3.6 (A:) Erg potassium channel, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 110 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: Flavin-binding PAS domain domain: Erg potassium channel, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.6 bits (153), Expect = 7e-13
Identities = 31/107 (28%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 200 QTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNC--RFLQGAGTDPEDVAKIRETL 257
+ F++++A + ++Y + GF ++ GY+ EV+ R C FL G T A+I + L
Sbjct: 2 RKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPCTQRRAAAQIAQAL 61
Query: 258 QNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304
+ + Y+KDG+ F L+ + P+K+++G V+ FI V
Sbjct: 62 LGAEERKVEIAFYRKDGSCFLCLVDVVPVKNEDGAVIMFILNFEVVM 108
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 57.1 bits (137), Expect = 8e-10
Identities = 20/146 (13%), Positives = 42/146 (28%), Gaps = 31/146 (21%)
Query: 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKTKT------------------- 715
K +G G +V +K G + +
Sbjct: 6 KLMGEGKESAVFNCY-SEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNE 64
Query: 716 --------HVCLIT--DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGI 765
+ + + L L+D + ++ + ++ + + +GI
Sbjct: 65 FRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRGI 124
Query: 766 IYRDLKPENVLLQGNGHVSLTDFDLS 791
++ DL NVL+ G + DF S
Sbjct: 125 VHGDLSQYNVLVSEEGIW-IIDFPQS 149
|
| >d1xj3a1 d.110.3.2 (A:154-259) Histidine kinase FixL heme domain {Bradyrhizobium japonicum [TaxId: 375]} Length = 106 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: Heme-binding PAS domain domain: Histidine kinase FixL heme domain species: Bradyrhizobium japonicum [TaxId: 375]
Score = 46.3 bits (108), Expect = 9e-07
Identities = 20/108 (18%), Positives = 34/108 (31%), Gaps = 9/108 (8%)
Query: 486 VITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKI----RAAID 541
++ D I S + L +S E +G+N L I +
Sbjct: 4 IVIDG---HGIIQLFSTAAERLFGWSELEAIGQNVNILMPEPDRSRHDSYISRYRTTSDP 60
Query: 542 NQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEH 589
+ + + + G F + M+ G YF G D +EH
Sbjct: 61 HIIGIGRIVTGKRRDGTTFPMHLSIGEMQS--GGEPYFTGFVRDLTEH 106
|
| >d1xj3a1 d.110.3.2 (A:154-259) Histidine kinase FixL heme domain {Bradyrhizobium japonicum [TaxId: 375]} Length = 106 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: Heme-binding PAS domain domain: Histidine kinase FixL heme domain species: Bradyrhizobium japonicum [TaxId: 375]
Score = 43.6 bits (101), Expect = 8e-06
Identities = 17/103 (16%), Positives = 36/103 (34%), Gaps = 6/103 (5%)
Query: 208 TKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKI----RETLQNGQSY 263
I S ++ G++ E +G+N L + I + +
Sbjct: 6 IDGHGIIQLFSTAAERLFGWSELEAIGQNVNILMPEPDRSRHDSYISRYRTTSDPHIIGI 65
Query: 264 CGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKH 306
+ ++DGT F L+I ++ F G ++++H
Sbjct: 66 GRIVTGKRRDGTTFPMHLSIGEMQSGGEPY--FTGFVRDLTEH 106
|
| >d1ew0a_ d.110.3.2 (A:) Histidine kinase FixL heme domain {Rhizobium meliloti [TaxId: 382]} Length = 130 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: Heme-binding PAS domain domain: Histidine kinase FixL heme domain species: Rhizobium meliloti [TaxId: 382]
Score = 44.3 bits (103), Expect = 7e-06
Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 6/101 (5%)
Query: 208 TKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ----SY 263
+ D I+ +A + GY +EV+G+N R L E ++ + G+
Sbjct: 32 SATDGTIVSFNAAAVRQFGYAEEEVIGQNLRILMPEPYRHEHDGYLQRYMATGEKRIIGI 91
Query: 264 CGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304
+ +KDG+ F L + ++ + F G +++
Sbjct: 92 DRVVSGQRKDGSTFPMKLAVGEMRSGGERF--FTGFIRDLT 130
|
| >d1ew0a_ d.110.3.2 (A:) Histidine kinase FixL heme domain {Rhizobium meliloti [TaxId: 382]} Length = 130 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: Heme-binding PAS domain domain: Histidine kinase FixL heme domain species: Rhizobium meliloti [TaxId: 382]
Score = 42.3 bits (98), Expect = 3e-05
Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 13/129 (10%)
Query: 461 DKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNC 520
D VR ++ L + L+ + V++ D I+ + + + Y+ EE++G+N
Sbjct: 9 DVVRARDAH----LRSILDTVPDATVVSAT---DGTIVSFNAAAVRQFGYAEEEVIGQNL 61
Query: 521 RFLQG----PETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEV 576
R L E D R + + + K G F + MR G
Sbjct: 62 RILMPEPYRHEHDGYLQRYMATGEKRIIGIDRVVSGQRKDGSTFPMKLAVGEMRS--GGE 119
Query: 577 QYFIGVQLD 585
++F G D
Sbjct: 120 RFFTGFIRD 128
|
| >d1ll8a_ d.110.3.5 (A:) N-terminal PAS domain of Pas kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 114 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: N-terminal PAS domain of Pas kinase domain: N-terminal PAS domain of Pas kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.9 bits (95), Expect = 7e-05
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 8/101 (7%)
Query: 486 VITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD 545
D + I+ A+D L YS ++++G+ ++
Sbjct: 12 FTVDAK--TTEILVANDKACGLLGYSSQDLIGQKLTQFFLRSDSDVVEALSEEHMEADGH 69
Query: 546 VTV----QLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGV 582
V + ++SG+K ++ MR ++ + V
Sbjct: 70 AAVVFGTVVDIISRSGEKIPVSVWMKRMRQERRL--CCVVV 108
|
| >d1p97a_ d.110.3.7 (A:) Hypoxia-inducible factor Hif2a, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 114 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: Hypoxia-inducible factor Hif2a, C-terminal domain domain: Hypoxia-inducible factor Hif2a, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.9 bits (89), Expect = 3e-04
Identities = 19/97 (19%), Positives = 30/97 (30%), Gaps = 1/97 (1%)
Query: 493 PDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 552
D + D EL Y EE+LGR+ + + V+ Q
Sbjct: 14 MDMKFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRM 73
Query: 553 YTKSGKKFWNLFHLQPMRDQK-GEVQYFIGVQLDGSE 588
K G W + + + + Q + V SE
Sbjct: 74 LAKHGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSE 110
|
| >d1p97a_ d.110.3.7 (A:) Hypoxia-inducible factor Hif2a, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 114 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: Hypoxia-inducible factor Hif2a, C-terminal domain domain: Hypoxia-inducible factor Hif2a, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.3 bits (85), Expect = 0.001
Identities = 18/107 (16%), Positives = 33/107 (30%), Gaps = 3/107 (2%)
Query: 199 QQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQ 258
+TF+ D Y ++ GY +E++GR+ A +
Sbjct: 5 SKTFLSR--HSMDMKFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCT 62
Query: 259 NGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDE-GKVLKFIGMQVEVS 304
GQ G+ K G W I + + + + +S
Sbjct: 63 KGQVVSGQYRMLAKHGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLS 109
|
| >d1mzua_ d.110.3.1 (A:) PYP domain of sensor histidine kinase Ppr {Rhodospirillum centenum [TaxId: 34018]} Length = 110 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: PYP-like domain: PYP domain of sensor histidine kinase Ppr species: Rhodospirillum centenum [TaxId: 34018]
Score = 37.4 bits (86), Expect = 0.001
Identities = 12/96 (12%), Positives = 25/96 (26%), Gaps = 5/96 (5%)
Query: 486 VITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVR-KIRAAIDNQT 544
+ D I + + L+ E ++GRN P T+ + + + T
Sbjct: 17 IQVDG---SGVIHRYNRTESRLSGRIPERVIGRNFFTEVAPCTNIPAFSGRFMDGVTSGT 73
Query: 545 DVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFI 580
+ +Q F+
Sbjct: 74 LDARFDFVFDFQMAPVRVQIRMQNAGVP-DRYWIFV 108
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 975 | |||
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1n9la_ | 109 | Putative blue light receptor, phot-lov1 domain {Gr | 99.81 | |
| d1n9la_ | 109 | Putative blue light receptor, phot-lov1 domain {Gr | 99.8 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.79 | |
| d1bywa_ | 110 | Erg potassium channel, N-terminal domain {Human (H | 99.74 | |
| d1bywa_ | 110 | Erg potassium channel, N-terminal domain {Human (H | 99.72 | |
| d1jnua_ | 104 | Photoreceptor phy3 flavin-binding domain, lov2 {Ma | 99.72 | |
| d1jnua_ | 104 | Photoreceptor phy3 flavin-binding domain, lov2 {Ma | 99.72 | |
| d1ew0a_ | 130 | Histidine kinase FixL heme domain {Rhizobium melil | 99.67 | |
| d1ew0a_ | 130 | Histidine kinase FixL heme domain {Rhizobium melil | 99.67 | |
| d1p97a_ | 114 | Hypoxia-inducible factor Hif2a, C-terminal domain | 99.6 | |
| d1p97a_ | 114 | Hypoxia-inducible factor Hif2a, C-terminal domain | 99.56 | |
| d1v9ya_ | 113 | Direct oxygen sensor protein, DOS {Escherichia col | 99.52 | |
| d1xj3a1 | 106 | Histidine kinase FixL heme domain {Bradyrhizobium | 99.51 | |
| d1xj3a1 | 106 | Histidine kinase FixL heme domain {Bradyrhizobium | 99.51 | |
| d1v9ya_ | 113 | Direct oxygen sensor protein, DOS {Escherichia col | 99.5 | |
| d1nwza_ | 125 | Photoactive yellow protein, PYP {Ectothiorhodospir | 99.36 | |
| d1mzua_ | 110 | PYP domain of sensor histidine kinase Ppr {Rhodosp | 99.33 | |
| d1nwza_ | 125 | Photoactive yellow protein, PYP {Ectothiorhodospir | 99.28 | |
| d1mzua_ | 110 | PYP domain of sensor histidine kinase Ppr {Rhodosp | 99.24 | |
| d1ll8a_ | 114 | N-terminal PAS domain of Pas kinase {Human (Homo s | 99.19 | |
| d1ll8a_ | 114 | N-terminal PAS domain of Pas kinase {Human (Homo s | 99.19 | |
| d1oj5a_ | 109 | PAS domain of steroid receptor coactivator 1A, NCo | 98.81 | |
| d1oj5a_ | 109 | PAS domain of steroid receptor coactivator 1A, NCo | 98.81 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 97.26 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 96.41 | |
| d2oola2 | 114 | Sensor protein PhyB2 {Rhodopseudomonas palustris [ | 96.34 | |
| d2oola2 | 114 | Sensor protein PhyB2 {Rhodopseudomonas palustris [ | 96.0 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 95.26 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 92.81 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 92.36 | |
| d2veaa3 | 127 | Phytochrome-like protein Cph1 {Synechocystis sp. p | 90.31 | |
| d2veaa3 | 127 | Phytochrome-like protein Cph1 {Synechocystis sp. p | 89.99 | |
| d2o9ca2 | 127 | Bacteriophytochrome BphP {Deinococcus radiodurans | 87.05 | |
| d2o9ca2 | 127 | Bacteriophytochrome BphP {Deinococcus radiodurans | 86.72 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 85.41 |
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-50 Score=439.46 Aligned_cols=252 Identities=35% Similarity=0.618 Sum_probs=217.4
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEE
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCL 719 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~l 719 (975)
..++|++++.||+|+||+||+|+++.+|+.||||++.+..+ .....+.+++||
T Consensus 6 ~p~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 85 (288)
T d1uu3a_ 6 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYF 85 (288)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEE
T ss_pred CCCCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEE
Confidence 34679999999999999999999999999999999875421 122236789999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
|||||+||+|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+.+.....
T Consensus 86 vmEy~~gg~L~~~~~~~--~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~ 163 (288)
T d1uu3a_ 86 GLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 163 (288)
T ss_dssp EECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred EEEccCCCCHHHhhhcc--CCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccceecccCCc
Confidence 99999999999998874 5699999999999999999999999999999999999999999999999999976542110
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
.......+||+.|+|||++.+..|+.++|||||||++|+|++|..||.+.+...+
T Consensus 164 -------------------------~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~ 218 (288)
T d1uu3a_ 164 -------------------------QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 218 (288)
T ss_dssp -------------------------------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred -------------------------ccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHH
Confidence 1123456899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChh--hHHHHHcCCCccCCCcchhhccCCCCC
Q 002051 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE--GANEIKKHPFFKGVNWALVRCMNPPEL 947 (975)
Q Consensus 880 ~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~--~~~elL~Hp~f~~~~~~~~~~~~~~~~ 947 (975)
+.++.+..+.+|. .+++++++||++||++||.+|||+.+ ....|++||||++++|.++....||.+
T Consensus 219 ~~~i~~~~~~~p~--~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~w~~l~~~~pP~l 286 (288)
T d1uu3a_ 219 FQKIIKLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 286 (288)
T ss_dssp HHHHHTTCCCCCT--TCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGGGSCCCCC
T ss_pred HHHHHcCCCCCCc--cCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCCCHHHhhcCCCCCC
Confidence 9999988877764 57899999999999999999999544 244589999999999999998888865
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-49 Score=441.86 Aligned_cols=245 Identities=40% Similarity=0.774 Sum_probs=217.1
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc---------------------------cccccCCeEE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML---------------------------NRNKTKTHVC 718 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~---------------------------~~~~~~~~~~ 718 (975)
+.+++|++++.||+|+||+||+|+++.+|+.||||++++..+. ....+..++|
T Consensus 2 i~l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 81 (337)
T d1o6la_ 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLC 81 (337)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEE
T ss_pred CchHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccc
Confidence 5678999999999999999999999999999999999765321 1223778999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
||||||+||+|.+++.+. +.+++..++.++.||+.||+|||++|||||||||+|||++.+|.+||+|||+|+.....
T Consensus 82 iv~ey~~gg~L~~~~~~~--~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~- 158 (337)
T d1o6la_ 82 FVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD- 158 (337)
T ss_dssp EEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT-
T ss_pred cceeccCCCchhhhhhcc--cCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeecccccccccC-
Confidence 999999999999999875 56999999999999999999999999999999999999999999999999999654311
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~ 878 (975)
.......+||+.|+|||++.+..|+.++|||||||++|+|++|++||.+.+..+
T Consensus 159 --------------------------~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~ 212 (337)
T d1o6la_ 159 --------------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER 212 (337)
T ss_dssp --------------------------TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred --------------------------CcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHH
Confidence 112345789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChh-hHHHHHcCCCccCCCcchhhc
Q 002051 879 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVRC 941 (975)
Q Consensus 879 ~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~-~~~elL~Hp~f~~~~~~~~~~ 941 (975)
++..+....+.+|. .+|+++++||++||++||.+|+++.. .++||++||||++++|..+..
T Consensus 213 ~~~~i~~~~~~~p~--~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i~~~~l~~ 274 (337)
T d1o6la_ 213 LFELILMEEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQ 274 (337)
T ss_dssp HHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHHHHHT
T ss_pred HHHHHhcCCCCCCc--cCCHHHHHHHHhhccCCchhhcccccccHHHHHcCcccccCCHHHHHh
Confidence 99999998877765 47999999999999999999996432 489999999999999987744
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.7e-49 Score=421.65 Aligned_cols=231 Identities=33% Similarity=0.571 Sum_probs=205.3
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVC 718 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~ 718 (975)
..+++|++++.||+|+||+||+|+++.+++.||+|++.+... .....+.+++|
T Consensus 3 ~~l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 82 (263)
T d2j4za1 3 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVY 82 (263)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred cchhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEE
Confidence 346789999999999999999999999999999999865421 12223778899
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
||||||+||+|.+++.+. ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.....
T Consensus 83 ivmEy~~~g~L~~~l~~~--~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~- 159 (263)
T d2j4za1 83 LILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS- 159 (263)
T ss_dssp EEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC-
T ss_pred EEEeecCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCCC-
Confidence 999999999999999874 56999999999999999999999999999999999999999999999999999654311
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 878 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~ 878 (975)
.....+||+.|||||++.+..|+.++|||||||++|+|++|+.||.+.+..+
T Consensus 160 ----------------------------~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~ 211 (263)
T d2j4za1 160 ----------------------------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 211 (263)
T ss_dssp ----------------------------CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred ----------------------------cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHH
Confidence 1234579999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 879 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 879 ~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
.+.++.+..+.+|. .+|+++++||.+||++||++||| ++|+|+||||++
T Consensus 212 ~~~~i~~~~~~~p~--~~s~~~~~li~~~L~~dp~~R~t----~~eil~hp~~~~ 260 (263)
T d2j4za1 212 TYKRISRVEFTFPD--FVTEGARDLISRLLKHNPSQRPM----LREVLEHPWITA 260 (263)
T ss_dssp HHHHHHTTCCCCCT--TSCHHHHHHHHHHTCSSGGGSCC----HHHHHTCHHHHH
T ss_pred HHHHHHcCCCCCCc--cCCHHHHHHHHHHccCCHhHCcC----HHHHHcCcCcCC
Confidence 99999888776664 47899999999999999999999 999999999963
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.3e-48 Score=430.08 Aligned_cols=241 Identities=42% Similarity=0.816 Sum_probs=212.8
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEE
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCL 719 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~l 719 (975)
.+++|++++.||+|+||+||+|+++.+|+.||||++++... .....+..++|+
T Consensus 2 sl~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i 81 (316)
T d1fota_ 2 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM 81 (316)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEE
T ss_pred chhHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeee
Confidence 35689999999999999999999999999999999875421 112236789999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
|||||.||+|..++... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+....
T Consensus 82 vmE~~~gg~l~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~--- 156 (316)
T d1fota_ 82 IMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD--- 156 (316)
T ss_dssp EECCCCSCBHHHHHHHT--SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS---
T ss_pred EeeecCCcccccccccc--ccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEecc---
Confidence 99999999999999875 5689999999999999999999999999999999999999999999999999965431
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
...+.+||+.|||||++.+..|+.++|||||||++|+|++|+.||.+.+..+.
T Consensus 157 ---------------------------~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~ 209 (316)
T d1fota_ 157 ---------------------------VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT 209 (316)
T ss_dssp ---------------------------CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred ---------------------------ccccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHH
Confidence 12346899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhc
Q 002051 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC 941 (975)
Q Consensus 880 ~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~ 941 (975)
+.++......+|. .++++++++|.+||++||.+|++.. .++++||+||||++++|..+..
T Consensus 210 ~~~i~~~~~~~p~--~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i~~~~l~~ 270 (316)
T d1fota_ 210 YEKILNAELRFPP--FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLS 270 (316)
T ss_dssp HHHHHHCCCCCCT--TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCCHHHHHT
T ss_pred HHHHHcCCCCCCC--CCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcccccCCHHHHHh
Confidence 9999998776654 4789999999999999999997432 3499999999999999998743
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3.8e-48 Score=434.24 Aligned_cols=255 Identities=38% Similarity=0.651 Sum_probs=218.3
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEE
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCL 719 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~l 719 (975)
.+++|++++.||+|+||+||+|+++.+|+.||||++.+... ........++|+
T Consensus 39 ~ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~ 118 (350)
T d1rdqe_ 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118 (350)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred CccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccc
Confidence 35789999999999999999999999999999999875421 112226778899
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
|||||.||+|..++.+. +.+++..++.++.||+.||.|||++|||||||||+|||++.+|.+||+|||+|+....
T Consensus 119 v~e~~~~g~l~~~l~~~--~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~--- 193 (350)
T d1rdqe_ 119 VMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--- 193 (350)
T ss_dssp EEECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS---
T ss_pred ccccccccchhhhHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeeccc---
Confidence 99999999999999875 5699999999999999999999999999999999999999999999999999966431
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
.....+||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+....
T Consensus 194 ---------------------------~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~ 246 (350)
T d1rdqe_ 194 ---------------------------RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246 (350)
T ss_dssp ---------------------------CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred ---------------------------ccccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHH
Confidence 12346899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccC-CChhhHHHHHcCCCccCCCcchhhccCCCCCCCCCcccC
Q 002051 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRL-GSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATD 955 (975)
Q Consensus 880 ~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~-t~~~~~~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~ 955 (975)
+.++......+|. .+++++.+||++||++||.+|+ +.+.++++||+||||++++|..+....-+....|.+..+
T Consensus 247 ~~~i~~~~~~~p~--~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~~~~~~~~~~~~~p~~p~~~~~ 321 (350)
T d1rdqe_ 247 YEKIVSGKVRFPS--HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGP 321 (350)
T ss_dssp HHHHHHCCCCCCT--TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCST
T ss_pred HHHHhcCCCCCCc--cCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCCCHHHHHhcCCCcCccCCCCCc
Confidence 9999988776654 5799999999999999999996 233449999999999999998775433222234655443
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.9e-48 Score=428.27 Aligned_cols=253 Identities=35% Similarity=0.687 Sum_probs=212.3
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh----------------------------ccccccCCeEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM----------------------------LNRNKTKTHVCL 719 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~----------------------------~~~~~~~~~~~l 719 (975)
+++|++++.||+|+||+||+|+++.+|+.||||++++... .....+++++||
T Consensus 1 iddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yi 80 (320)
T d1xjda_ 1 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF 80 (320)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred CCCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeE
Confidence 3689999999999999999999999999999999975421 112226788999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
|||||+||+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.....
T Consensus 81 vmEy~~~g~L~~~i~~~--~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~-- 156 (320)
T d1xjda_ 81 VMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG-- 156 (320)
T ss_dssp EEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT--
T ss_pred EEeecCCCcHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhhcccc--
Confidence 99999999999999874 56999999999999999999999999999999999999999999999999999654311
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
.......+||+.|+|||++.+..|+.++|||||||++|+|++|+.||.+.+...+
T Consensus 157 -------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~ 211 (320)
T d1xjda_ 157 -------------------------DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL 211 (320)
T ss_dssp -------------------------TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred -------------------------cccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHH
Confidence 1122346899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHH-HHHcCCCccCCCcchhhccCCCCCCCCCcccC
Q 002051 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN-EIKKHPFFKGVNWALVRCMNPPELDAPLFATD 955 (975)
Q Consensus 880 ~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~-elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~ 955 (975)
+.++..+.+.+|. .+|+++.+||++||++||.+||| +. +|++||||++++|..+....-+....|.+.++
T Consensus 212 ~~~i~~~~~~~p~--~~s~~~~dli~~~L~~dP~~R~s----~~~~l~~hpff~~~~~~~l~~~~~~pp~~p~~~~~ 282 (320)
T d1xjda_ 212 FHSIRMDNPFYPR--WLEKEAKDLLVKLFVREPEKRLG----VRGDIRQHPLFREINWEELERKEIDPPFRPKVKSP 282 (320)
T ss_dssp HHHHHHCCCCCCT--TSCHHHHHHHHHHSCSSGGGSBT----TBSCGGGSGGGTTCCHHHHHTTCSCC---------
T ss_pred HHHHHcCCCCCCc--cCCHHHHHHHHHhcccCCCCCcC----HHHHHHhCchhccCCHHHHHhcCCCCCCCCCCCCc
Confidence 9999888766654 47999999999999999999999 64 89999999999998775433222234555443
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-47 Score=419.40 Aligned_cols=232 Identities=26% Similarity=0.443 Sum_probs=202.4
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEEec
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITDY 723 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~Ey 723 (975)
.++|+++++||+|+||+||+|+++.+|+.||||++++.. +.....+.+++||||||
T Consensus 19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy 98 (293)
T d1yhwa1 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (293)
T ss_dssp TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEe
Confidence 457999999999999999999999999999999987542 11222367889999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
|+||+|.+++.+ +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+.+....
T Consensus 99 ~~gg~L~~~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~----- 170 (293)
T d1yhwa1 99 LAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ----- 170 (293)
T ss_dssp CTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT-----
T ss_pred cCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeecccc-----
Confidence 999999999876 459999999999999999999999999999999999999999999999999997643211
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 883 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~i 883 (975)
......+||+.|+|||++.+..|+.++|||||||++|+|++|.+||.+.+....+..+
T Consensus 171 ----------------------~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~ 228 (293)
T d1yhwa1 171 ----------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 228 (293)
T ss_dssp ----------------------CCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred ----------------------ccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHH
Confidence 1224568999999999999999999999999999999999999999998888887777
Q ss_pred HhcC-CCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 884 LHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 884 ~~~~-~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
.... ..++.+..+|..+++||.+||++||.+||| ++|+|+||||+.
T Consensus 229 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s----~~eil~Hp~~~~ 275 (293)
T d1yhwa1 229 ATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGS----AKELLQHQFLKI 275 (293)
T ss_dssp HHHCSCCCSSGGGSCHHHHHHHHHHTCSSTTTSCC----HHHHTTCGGGGG
T ss_pred HhCCCCCCCCcccCCHHHHHHHHHHccCChhHCcC----HHHHhcCHhhCC
Confidence 6643 344445668999999999999999999999 999999999973
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=1.8e-47 Score=431.12 Aligned_cols=244 Identities=34% Similarity=0.616 Sum_probs=203.3
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh------------------------------ccccccCC
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM------------------------------LNRNKTKT 715 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~------------------------------~~~~~~~~ 715 (975)
+.+++|++++.||+|+||+||+|+++.+|+.||||++.+..+ .....+.+
T Consensus 1 lslddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~ 80 (364)
T d1omwa3 1 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD 80 (364)
T ss_dssp CCSTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS
T ss_pred CCHHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECC
Confidence 357899999999999999999999999999999999865321 11123678
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
++|||||||+||+|.+++.+. ..+++..++.++.||+.||.|||++|||||||||+|||++.+|.+||+|||+|+.+.
T Consensus 81 ~~~ivmE~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~ 158 (364)
T d1omwa3 81 KLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS 158 (364)
T ss_dssp EEEEEECCCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECS
T ss_pred EEEEEEEecCCCcHHHHHHhc--ccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeeceeeecC
Confidence 899999999999999999875 568999999999999999999999999999999999999999999999999996543
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 874 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~ 874 (975)
.. .....+||+.|+|||++.+ ..|+.++|||||||++|+|++|+.||.+.
T Consensus 159 ~~-----------------------------~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~ 209 (364)
T d1omwa3 159 KK-----------------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 209 (364)
T ss_dssp SS-----------------------------CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred CC-----------------------------cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCC
Confidence 11 1234579999999999964 56899999999999999999999999875
Q ss_pred CHHHH---HHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhcc
Q 002051 875 TRQKT---FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCM 942 (975)
Q Consensus 875 ~~~~~---~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~~ 942 (975)
+.... ...+.... .+.+..+|+++++||.+||++||.+|||+. ..++||++||||++++|..+...
T Consensus 210 ~~~~~~~~~~~~~~~~--~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i~~~~~~~~ 279 (364)
T d1omwa3 210 KTKDKHEIDRMTLTMA--VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQ 279 (364)
T ss_dssp CSSCHHHHHHHSSSCC--CCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTCCHHHHHTT
T ss_pred CHHHHHHHHHhcccCC--CCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccCCCHHHHhcC
Confidence 43322 22222222 233346899999999999999999999953 35799999999999999877443
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.7e-48 Score=417.29 Aligned_cols=235 Identities=26% Similarity=0.449 Sum_probs=196.1
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-------------------------ccccccCCeEEEEEe
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-------------------------LNRNKTKTHVCLITD 722 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-------------------------~~~~~~~~~~~lV~E 722 (975)
.++|++++.||+|+||+||+|+++.+|+.||||++++... .....+.+.+|||||
T Consensus 4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmE 83 (271)
T d1nvra_ 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 83 (271)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEe
Confidence 4579999999999999999999999999999999865421 122226788999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
||+||+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+......
T Consensus 84 y~~gg~L~~~l~~~--~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~---- 157 (271)
T d1nvra_ 84 YCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN---- 157 (271)
T ss_dssp CCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETT----
T ss_pred ccCCCcHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeeccCC----
Confidence 99999999999764 569999999999999999999999999999999999999999999999999997643211
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCC-CChhHHHHHHHHHHHHHhCCCCCCCCCHHHH-H
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQKT-F 880 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~-~ 880 (975)
........+||+.|||||++.+..+ +.++|||||||++|+|++|++||.+.+.... +
T Consensus 158 ---------------------~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~ 216 (271)
T d1nvra_ 158 ---------------------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 216 (271)
T ss_dssp ---------------------EECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHH
T ss_pred ---------------------ccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHH
Confidence 0112345689999999999988876 5689999999999999999999987654433 3
Q ss_pred HHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 881 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 881 ~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
..+.......+....+|.++.+||.+||++||++||| ++|+|+||||+.
T Consensus 217 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t----~~eil~hpwf~~ 265 (271)
T d1nvra_ 217 SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT----IPDIKKDRWYNK 265 (271)
T ss_dssp HHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCC----HHHHTTCTTTTC
T ss_pred HHHhcCCCCCCccccCCHHHHHHHHHHcCCChhHCcC----HHHHhcCHhhCc
Confidence 3333443334444568999999999999999999999 999999999963
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=7.2e-47 Score=416.33 Aligned_cols=232 Identities=31% Similarity=0.510 Sum_probs=193.3
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-------------------------ccccccCCeEEEEEe
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-------------------------LNRNKTKTHVCLITD 722 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-------------------------~~~~~~~~~~~lV~E 722 (975)
.+.|++++.||+|+||+||+|+++.+|+.||||++.+... .....+.+++|||||
T Consensus 8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE 87 (307)
T d1a06a_ 8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ 87 (307)
T ss_dssp GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 3569999999999999999999999999999999875421 122236788999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe---cCCcEEEeeccCCCccCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ---GNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~---~~g~vkL~DFG~a~~~~~~~~ 799 (975)
||+||+|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||+. .++.+||+|||+|+.....
T Consensus 88 ~~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~-- 163 (307)
T d1a06a_ 88 LVSGGELFDRIVEK--GFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG-- 163 (307)
T ss_dssp CCCSCBHHHHHHTC--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC-----------
T ss_pred ccCCCcHHHhhhcc--cCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCC--
Confidence 99999999999764 5699999999999999999999999999999999999995 4789999999999654311
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
......+||+.|||||++.+..|+.++|||||||++|+|++|.+||.+.+....
T Consensus 164 --------------------------~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~ 217 (307)
T d1a06a_ 164 --------------------------SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKL 217 (307)
T ss_dssp -----------------------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred --------------------------CeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHH
Confidence 122346899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCC--CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 880 FANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 880 ~~~i~~~~~~~p~--~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
...+......++. ...+|+++++||.+||++||++||| ++|+|+||||++
T Consensus 218 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s----~~eil~hp~~~~ 269 (307)
T d1a06a_ 218 FEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFT----CEQALQHPWIAG 269 (307)
T ss_dssp HHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCC----HHHHHHSTTTTS
T ss_pred HHHHhccCCCCCCccccCCCHHHHHHHHHHccCCHhHCcC----HHHHhcCHhhCC
Confidence 9999987766554 3568999999999999999999999 999999999985
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=1.4e-46 Score=421.30 Aligned_cols=237 Identities=28% Similarity=0.473 Sum_probs=208.1
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEEec
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITDY 723 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~Ey 723 (975)
+++|++++.||+|+||+||+|+++.+|+.||||++.+.. +.....+.+++||||||
T Consensus 25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~ 104 (350)
T d1koaa2 25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 104 (350)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 468999999999999999999999999999999986542 12222378899999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec--CCcEEEeeccCCCccCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG--NGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~--~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
|+||+|.+++... .+.+++..++.++.||+.||.|||++|||||||||+|||++. ++.+||+|||+|+.+...
T Consensus 105 ~~gg~L~~~l~~~-~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~---- 179 (350)
T d1koaa2 105 MSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK---- 179 (350)
T ss_dssp CCSCBHHHHHTCT-TSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTT----
T ss_pred CCCCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecccc----
Confidence 9999999999653 356999999999999999999999999999999999999964 578999999999764321
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~ 881 (975)
......+||+.|||||++.+..|+.++|||||||++|+|++|+.||.+.+..+.+.
T Consensus 180 ------------------------~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~ 235 (350)
T d1koaa2 180 ------------------------QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLR 235 (350)
T ss_dssp ------------------------SCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred ------------------------cccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHH
Confidence 12234689999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcc
Q 002051 882 NILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 937 (975)
Q Consensus 882 ~i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~ 937 (975)
.+......++.. ..+|.++++||.+||++||++||| ++|+|+||||+..++.
T Consensus 236 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t----~~eil~hp~~~~~~~~ 289 (350)
T d1koaa2 236 NVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMT----IHQALEHPWLTPGNAP 289 (350)
T ss_dssp HHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCC----HHHHHHSTTTSCTTCC
T ss_pred HHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcC----HHHHhcCcccCCCCCC
Confidence 999887766544 458899999999999999999999 9999999999988764
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-46 Score=410.47 Aligned_cols=237 Identities=30% Similarity=0.489 Sum_probs=204.2
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh------------------------------ccccccCCeEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM------------------------------LNRNKTKTHVC 718 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~------------------------------~~~~~~~~~~~ 718 (975)
++|++++.||+|+||+||+|+++.+|+.||||++++... .....+..++|
T Consensus 10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ 89 (293)
T d1jksa_ 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 89 (293)
T ss_dssp GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 579999999999999999999999999999999865421 11223778999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC----cEEEeeccCCCcc
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG----HVSLTDFDLSCLT 794 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g----~vkL~DFG~a~~~ 794 (975)
||||||+||+|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+|...
T Consensus 90 iv~E~~~gg~L~~~i~~~--~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~ 167 (293)
T d1jksa_ 90 LILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167 (293)
T ss_dssp EEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEEEcCCCccccchhccc--cccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhc
Confidence 999999999999999874 5699999999999999999999999999999999999998776 5999999999664
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCC
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 874 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~ 874 (975)
... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus 168 ~~~----------------------------~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~ 219 (293)
T d1jksa_ 168 DFG----------------------------NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 219 (293)
T ss_dssp TTS----------------------------CBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCC----------------------------ccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCC
Confidence 321 1223467999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchh
Q 002051 875 TRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 939 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~ 939 (975)
+..+.+.++......++.. ..+|..+++||++||++||.+||| ++|+|+||||+..+|...
T Consensus 220 ~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s----~~eil~hp~~~~~~~~~~ 282 (293)
T d1jksa_ 220 TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMT----IQDSLQHPWIKPKDTQQA 282 (293)
T ss_dssp SHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHHSTTTCC------
T ss_pred CHHHHHHHHHhcCCCCCchhcCCCCHHHHHHHHHHccCChhHCcC----HHHHhcCcccCCCChhHh
Confidence 9999999998887766533 568899999999999999999999 999999999999998755
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-47 Score=422.85 Aligned_cols=238 Identities=26% Similarity=0.388 Sum_probs=194.3
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-------------------------hccccccCCeEEEE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------------------MLNRNKTKTHVCLI 720 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------------------~~~~~~~~~~~~lV 720 (975)
+..++|+++++||+|+||+||+|+++.+|+.||+|++++.. ++....+..++|||
T Consensus 3 l~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iV 82 (322)
T d1s9ja_ 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 82 (322)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 45678999999999999999999999999999999986431 11222367889999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~-~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
||||+||+|.+++.+. +.+++..++.++.||+.||.|||+ +||+||||||+|||++.+|.+||+|||+|+....
T Consensus 83 mEy~~gg~L~~~l~~~--~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~--- 157 (322)
T d1s9ja_ 83 MEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--- 157 (322)
T ss_dssp EECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH---
T ss_pred EEcCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCC---
Confidence 9999999999999874 569999999999999999999997 5999999999999999999999999999965321
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
....+.+||+.|+|||++.+..|+.++|||||||++|+|++|+.||.+.+....
T Consensus 158 --------------------------~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~ 211 (322)
T d1s9ja_ 158 --------------------------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 211 (322)
T ss_dssp --------------------------HTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHH
T ss_pred --------------------------CccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
Confidence 122356899999999999999999999999999999999999999977543221
Q ss_pred H------------------------------------------HHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCC
Q 002051 880 F------------------------------------------ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLG 917 (975)
Q Consensus 880 ~------------------------------------------~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t 917 (975)
. ..+.....+.......|.++++||.+||++||.+|||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~t 291 (322)
T d1s9ja_ 212 ELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERAD 291 (322)
T ss_dssp HHHC------------------------------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCC
T ss_pred HHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcC
Confidence 1 0111111111111236889999999999999999999
Q ss_pred ChhhHHHHHcCCCccCCCcch
Q 002051 918 SHEGANEIKKHPFFKGVNWAL 938 (975)
Q Consensus 918 ~~~~~~elL~Hp~f~~~~~~~ 938 (975)
++|+|+||||++.+|..
T Consensus 292 ----a~e~L~Hpf~~~~~~~~ 308 (322)
T d1s9ja_ 292 ----LKQLMVHAFIKRSDAEE 308 (322)
T ss_dssp ----HHHHHTSHHHHHHHHSC
T ss_pred ----HHHHhhCHhhCcCCccc
Confidence 99999999998776653
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.1e-47 Score=407.76 Aligned_cols=232 Identities=26% Similarity=0.472 Sum_probs=189.3
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc--------------------------ccc--ccCCeEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--------------------------NRN--KTKTHVCL 719 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~--------------------------~~~--~~~~~~~l 719 (975)
.++|++++.||+|+||+||+|+++.+|+.||||++.+.... ... .....+||
T Consensus 3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~i 82 (269)
T d2java1 3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 82 (269)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEE
T ss_pred chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEE
Confidence 35799999999999999999999999999999998654211 111 13467899
Q ss_pred EEeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCC-----CeecCCCCCCEEEecCCcEEEeeccCCC
Q 002051 720 ITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQG-----IIYRDLKPENVLLQGNGHVSLTDFDLSC 792 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qIl~aL~yLH~~g-----IiHrDIKp~NILl~~~g~vkL~DFG~a~ 792 (975)
|||||+||+|.+++.+. ....+++..++.++.||+.||.|||++| |+||||||+|||++.++.+||+|||+|+
T Consensus 83 vmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~ 162 (269)
T d2java1 83 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 162 (269)
T ss_dssp EEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHH
T ss_pred EEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeecccee
Confidence 99999999999998642 2357999999999999999999999976 9999999999999999999999999996
Q ss_pred ccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCC
Q 002051 793 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 872 (975)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~ 872 (975)
..... .......+||+.|||||++.+..|+.++|||||||++|+|++|+.||.
T Consensus 163 ~~~~~---------------------------~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~ 215 (269)
T d2java1 163 ILNHD---------------------------TSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT 215 (269)
T ss_dssp HC--------------------------------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred ecccC---------------------------CCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCC
Confidence 64311 112235689999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCc
Q 002051 873 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 931 (975)
Q Consensus 873 ~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f 931 (975)
+.+..+++.++..+.... .+..+|+++.+||.+||+.||.+||| ++|||+|||+
T Consensus 216 ~~~~~~~~~~i~~~~~~~-~~~~~s~~l~~li~~~L~~dp~~Rps----~~ell~hp~i 269 (269)
T d2java1 216 AFSQKELAGKIREGKFRR-IPYRYSDELNEIITRMLNLKDYHRPS----VEEILENPLI 269 (269)
T ss_dssp CSSHHHHHHHHHHTCCCC-CCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHTSTTC
T ss_pred CCCHHHHHHHHHcCCCCC-CCcccCHHHHHHHHHHcCCChhHCcC----HHHHHhCCcC
Confidence 999999888888876542 33468999999999999999999999 9999999995
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-46 Score=408.97 Aligned_cols=233 Identities=24% Similarity=0.417 Sum_probs=200.2
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEEecc
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITDYC 724 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~Ey~ 724 (975)
+.|+++++||+|+||+||+|+++.+|+.||||++++.. +.....+.+.+|||||||
T Consensus 12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~ 91 (288)
T d2jfla1 12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 91 (288)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence 46999999999999999999999999999999986532 112223678899999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCc
Q 002051 725 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 804 (975)
Q Consensus 725 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~ 804 (975)
+||+|.+++.+. ...+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+....
T Consensus 92 ~~g~L~~~~~~~-~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~-------- 162 (288)
T d2jfla1 92 AGGAVDAVMLEL-ERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR-------- 162 (288)
T ss_dssp TTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHH--------
T ss_pred CCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCC--------
Confidence 999999997653 35699999999999999999999999999999999999999999999999999854321
Q ss_pred chhhhhccCCCCCcccccccccccccccCCCCccchhhhc-----CCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 805 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
........+||+.|+|||++. +..|+.++|||||||++|+|++|++||.+.+..+.
T Consensus 163 -------------------~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~ 223 (288)
T d2jfla1 163 -------------------TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV 223 (288)
T ss_dssp -------------------HHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH
T ss_pred -------------------CcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHH
Confidence 001223568999999999984 45688999999999999999999999999998888
Q ss_pred HHHHHhcCCC-CCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 880 FANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 880 ~~~i~~~~~~-~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
+.++.....+ ++.+..+|.++++||.+||++||.+||| ++|||+||||+.
T Consensus 224 ~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t----~~ell~hp~~~~ 274 (288)
T d2jfla1 224 LLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWT----TSQLLQHPFVTV 274 (288)
T ss_dssp HHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCC----HHHHTTSGGGCC
T ss_pred HHHHHcCCCCCCCccccCCHHHHHHHHHHccCChhHCcC----HHHHhcCcccCC
Confidence 8888886543 3334568999999999999999999999 999999999974
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=3.7e-46 Score=418.09 Aligned_cols=234 Identities=28% Similarity=0.480 Sum_probs=206.1
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch------------------------hccccccCCeEEEEEec
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV------------------------MLNRNKTKTHVCLITDY 723 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~------------------------~~~~~~~~~~~~lV~Ey 723 (975)
.++|++++.||+|+||+||+|+++.+|+.||||++++.. ++....++.++||||||
T Consensus 28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~ 107 (352)
T d1koba_ 28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 107 (352)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 357999999999999999999999999999999986542 12223378899999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe--cCCcEEEeeccCCCccCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ--GNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~--~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
|+||+|.+++... ...+++..++.|+.||+.||.|||++||+||||||+|||++ .++.+||+|||+|+.....
T Consensus 108 ~~gg~L~~~~~~~-~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~---- 182 (352)
T d1koba_ 108 LSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD---- 182 (352)
T ss_dssp CCCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT----
T ss_pred CCCChHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCCC----
Confidence 9999999988654 34699999999999999999999999999999999999998 5789999999999765421
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 881 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~ 881 (975)
......+||+.|+|||++.+..|+.++|||||||++|+|++|.+||.+.+..+.+.
T Consensus 183 ------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~ 238 (352)
T d1koba_ 183 ------------------------EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQ 238 (352)
T ss_dssp ------------------------SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH
T ss_pred ------------------------CceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 12234679999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCC
Q 002051 882 NILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 934 (975)
Q Consensus 882 ~i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~ 934 (975)
.+......++.. ..+|+++++||.+||++||.+||| ++|+|+||||++.
T Consensus 239 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s----~~eil~Hp~~~~~ 289 (352)
T d1koba_ 239 NVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLT----VHDALEHPWLKGD 289 (352)
T ss_dssp HHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHTSTTTSSC
T ss_pred HHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcC----HHHHhcCHhhCCC
Confidence 999887766643 568999999999999999999999 9999999999864
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.2e-46 Score=411.29 Aligned_cols=227 Identities=26% Similarity=0.376 Sum_probs=200.2
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh---------------------------ccccccCCeEEEEEe
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---------------------------LNRNKTKTHVCLITD 722 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~---------------------------~~~~~~~~~~~lV~E 722 (975)
.|+++++||+|+||+||+|+++.+|+.||||++++... .....+.+++|||||
T Consensus 16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E 95 (309)
T d1u5ra_ 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (309)
T ss_dssp HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEE
Confidence 49999999999999999999999999999999865321 112226788999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
||.||+|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|....
T Consensus 96 ~~~~g~l~~~~~~~--~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~------- 166 (309)
T d1u5ra_ 96 YCLGSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA------- 166 (309)
T ss_dssp CCSEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS-------
T ss_pred ecCCCchHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccC-------
Confidence 99999998777664 569999999999999999999999999999999999999999999999999996432
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC---CCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~---~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
.....+||+.|||||++.+ ..|+.++|||||||++|+|++|..||.+.+..+.
T Consensus 167 ------------------------~~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~ 222 (309)
T d1u5ra_ 167 ------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA 222 (309)
T ss_dssp ------------------------SBCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred ------------------------CCCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHH
Confidence 1234579999999999964 4588999999999999999999999999999998
Q ss_pred HHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 880 ~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
+..+.......+....+|+.+++||.+||++||.+||| ++|+|+||||..
T Consensus 223 ~~~i~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt----~~ell~Hp~~~~ 272 (309)
T d1u5ra_ 223 LYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT----SEVLLKHRFVLR 272 (309)
T ss_dssp HHHHHHSCCCCCSCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHTTCHHHHS
T ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHHCcCChhHCcC----HHHHHhCHHhcC
Confidence 98888887766666678999999999999999999999 999999999964
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-45 Score=399.25 Aligned_cols=226 Identities=22% Similarity=0.346 Sum_probs=188.0
Q ss_pred cccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc--------------------------cc----cccCCeEEEE
Q 002051 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--------------------------NR----NKTKTHVCLI 720 (975)
Q Consensus 671 y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~--------------------------~~----~~~~~~~~lV 720 (975)
|++.++||+|+||+||+|.++.+++.||+|.+...... .. .....++|||
T Consensus 11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv 90 (270)
T d1t4ha_ 11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 90 (270)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence 47788999999999999999999999999998654211 00 0124678999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEEe-cCCcEEEeeccCCCccCCC
Q 002051 721 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQ-GNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 721 ~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~g--IiHrDIKp~NILl~-~~g~vkL~DFG~a~~~~~~ 797 (975)
||||+||+|.+++.+. ..+++..++.++.||+.||+|||++| |+||||||+|||++ .++.+||+|||+|+....
T Consensus 91 mE~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~- 167 (270)
T d1t4ha_ 91 TELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA- 167 (270)
T ss_dssp EECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT-
T ss_pred EeCCCCCcHHHHHhcc--ccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccC-
Confidence 9999999999999874 56999999999999999999999998 99999999999997 578999999999954321
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
......+||+.|||||++.+ .|+.++|||||||++|+|++|+.||.+....
T Consensus 168 ----------------------------~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~ 218 (270)
T d1t4ha_ 168 ----------------------------SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA 218 (270)
T ss_dssp ----------------------------TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH
T ss_pred ----------------------------CccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccH
Confidence 11235689999999999876 5999999999999999999999999876544
Q ss_pred H-HHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCcc
Q 002051 878 K-TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932 (975)
Q Consensus 878 ~-~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~ 932 (975)
. ++..+..+..+.......++++.+||.+||++||++||| ++|||+||||+
T Consensus 219 ~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s----~~ell~Hp~fk 270 (270)
T d1t4ha_ 219 AQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYS----IKDLLNHAFFQ 270 (270)
T ss_dssp HHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCC----HHHHHTSGGGC
T ss_pred HHHHHHHHcCCCCcccCccCCHHHHHHHHHHccCCHhHCcC----HHHHhCCcccC
Confidence 4 445554443333333457889999999999999999999 99999999996
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=3e-45 Score=397.31 Aligned_cols=232 Identities=31% Similarity=0.477 Sum_probs=203.0
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh----------------------------------cccccc
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM----------------------------------LNRNKT 713 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~----------------------------------~~~~~~ 713 (975)
.++|++++.||+|+||+||+|+++.+|+.||||++++... .....+
T Consensus 2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 81 (277)
T d1phka_ 2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 81 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence 3689999999999999999999999999999999865321 112227
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 714 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 714 ~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
++++|||||||+||+|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 82 ~~~~~ivmE~~~~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~ 159 (277)
T d1phka_ 82 NTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ 159 (277)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred CcceEEEEEcCCCchHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccchheeE
Confidence 78999999999999999999874 5699999999999999999999999999999999999999999999999999976
Q ss_pred cCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC------CCCCChhHHHHHHHHHHHHHhC
Q 002051 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG------AGHTSAVDWWALGILLYEMLYG 867 (975)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~------~~~~~k~DIWSLG~il~ell~G 867 (975)
.+.. ......+||+.|+|||++.+ ..++.++||||+||++|+|++|
T Consensus 160 ~~~~----------------------------~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g 211 (277)
T d1phka_ 160 LDPG----------------------------EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 211 (277)
T ss_dssp CCTT----------------------------CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHS
T ss_pred ccCC----------------------------CceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccC
Confidence 5421 11234679999999999853 4568899999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 868 YTPFRGKTRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 868 ~~Pf~~~~~~~~~~~i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
+.||.+.+....+..+..+...++.. ..+|+++++||++||++||.+||| ++|+|+||||+.
T Consensus 212 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s----~~eil~h~~~~~ 275 (277)
T d1phka_ 212 SPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYT----AEEALAHPFFQQ 275 (277)
T ss_dssp SCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCC----HHHHTTSGGGCT
T ss_pred CCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcC----HHHHHcCHHHHH
Confidence 99999999999999999887665443 468999999999999999999999 999999999985
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-45 Score=405.43 Aligned_cols=233 Identities=26% Similarity=0.432 Sum_probs=204.7
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-----------------------hccccccCCeEEEEEecc
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-----------------------MLNRNKTKTHVCLITDYC 724 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-----------------------~~~~~~~~~~~~lV~Ey~ 724 (975)
.++|++++.||+|+||+||+|.++.+|+.||||++++.. +.....+.+++|||||||
T Consensus 4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~ 83 (321)
T d1tkia_ 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI 83 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecC
Confidence 468999999999999999999999999999999987542 122333788999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC--CcEEEeeccCCCccCCCCCCCC
Q 002051 725 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN--GHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 725 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~--g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
+||+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.+ +.+||+|||+++.....
T Consensus 84 ~gg~L~~~i~~~-~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~----- 157 (321)
T d1tkia_ 84 SGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG----- 157 (321)
T ss_dssp CCCBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT-----
T ss_pred CCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccC-----
Confidence 999999999764 3469999999999999999999999999999999999999854 48999999998654311
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 882 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~ 882 (975)
......+||+.|+|||.+.+..|+.++|||||||++|+|++|.+||.+.+..+.+.+
T Consensus 158 -----------------------~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~ 214 (321)
T d1tkia_ 158 -----------------------DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIEN 214 (321)
T ss_dssp -----------------------CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH
T ss_pred -----------------------CcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 122345789999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 883 ILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 883 i~~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
+.+..+.++.. ..+|+++++||++||.+||.+||| ++|+|+||||+.
T Consensus 215 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s----~~eil~hp~~~~ 263 (321)
T d1tkia_ 215 IMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMT----ASEALQHPWLKQ 263 (321)
T ss_dssp HHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHHSHHHHS
T ss_pred HHhCCCCCChhhccCCCHHHHHHHHHHccCChhHCcC----HHHHhcCHhhcc
Confidence 99988776643 458999999999999999999999 999999999974
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-45 Score=408.50 Aligned_cols=234 Identities=25% Similarity=0.443 Sum_probs=192.6
Q ss_pred CCCccccc-ccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------cccc----ccCCeEEEEEe
Q 002051 668 LQHFRPIK-PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------LNRN----KTKTHVCLITD 722 (975)
Q Consensus 668 ~~~y~i~~-~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------~~~~----~~~~~~~lV~E 722 (975)
.++|.++. .||+|+||+||+|+++.+++.||||++++... +... ....++|||||
T Consensus 10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmE 89 (335)
T d2ozaa1 10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME 89 (335)
T ss_dssp GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCcHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEE
Confidence 56899986 59999999999999999999999999875421 1111 12567899999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec---CCcEEEeeccCCCccCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~---~g~vkL~DFG~a~~~~~~~~ 799 (975)
||+||+|.+++...+...+++..++.++.||+.||+|||++||+||||||+|||++. .+.+||+|||+|+.....
T Consensus 90 y~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~-- 167 (335)
T d2ozaa1 90 CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH-- 167 (335)
T ss_dssp CCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCC--
T ss_pred CCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceeeeccCC--
Confidence 999999999998765567999999999999999999999999999999999999985 457999999999654321
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
......+||+.|+|||++.+..|+.++|||||||++|+|++|++||.+.+....
T Consensus 168 --------------------------~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~ 221 (335)
T d2ozaa1 168 --------------------------NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 221 (335)
T ss_dssp --------------------------CCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--
T ss_pred --------------------------CccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHH
Confidence 122346899999999999999999999999999999999999999987665444
Q ss_pred HHHHH----hcCCCCCCC--CCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 880 FANIL----HKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 880 ~~~i~----~~~~~~p~~--~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
...+. ...+.+|.. ..+|+++++||++||++||++||| +.|+|+||||..
T Consensus 222 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s----~~eil~hp~~~~ 277 (335)
T d2ozaa1 222 SPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWIMQ 277 (335)
T ss_dssp ------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCC----HHHHHHSHHHHT
T ss_pred HHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcC----HHHHHcCHHhhC
Confidence 43333 334444433 347899999999999999999999 999999999964
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-44 Score=399.76 Aligned_cols=262 Identities=41% Similarity=0.718 Sum_probs=212.6
Q ss_pred ccCCCcccccccccCCceEEEEEEEe---CCCeEEEEEEeccchhc-----------------------------ccccc
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-----------------------------NRNKT 713 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~---~t~~~vAiK~l~~~~~~-----------------------------~~~~~ 713 (975)
+.+++|+++++||+|+||+||+|++. .+|+.||||++++.... ....+
T Consensus 21 ~~l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~ 100 (322)
T d1vzoa_ 21 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT 100 (322)
T ss_dssp CCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE
T ss_pred cchhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeecc
Confidence 45688999999999999999999984 47899999998654211 11125
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 714 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 714 ~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
...+|+|||||.||+|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+.
T Consensus 101 ~~~~~~v~e~~~~~~L~~~i~~~--~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~ 178 (322)
T d1vzoa_ 101 ETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 178 (322)
T ss_dssp TTEEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred CCceeeeeecccccHHHHHHHhc--ccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccchhh
Confidence 77899999999999999999875 5688999999999999999999999999999999999999999999999999865
Q ss_pred cCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC--CCCChhHHHHHHHHHHHHHhCCCCC
Q 002051 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLYGYTPF 871 (975)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~--~~~~k~DIWSLG~il~ell~G~~Pf 871 (975)
+.... ........|++.|++||.+.+. .++.++|||||||+||+|++|..||
T Consensus 179 ~~~~~--------------------------~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF 232 (322)
T d1vzoa_ 179 FVADE--------------------------TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 232 (322)
T ss_dssp CCGGG--------------------------GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTT
T ss_pred hcccc--------------------------cccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCC
Confidence 43211 1122346799999999999764 4678999999999999999999999
Q ss_pred CCCCHHHHHHHHH----hcCCCCCCCCCCcHHHHHHHHHhcccCccccCCCh-hhHHHHHcCCCccCCCcchhhccCCCC
Q 002051 872 RGKTRQKTFANIL----HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPE 946 (975)
Q Consensus 872 ~~~~~~~~~~~i~----~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~-~~~~elL~Hp~f~~~~~~~~~~~~~~~ 946 (975)
.+.+.......+. .....+ +..+|.++.+||++||++||++|||+. .+++|+|+||||++++|..+.....|.
T Consensus 233 ~~~~~~~~~~~i~~~~~~~~~~~--~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i~~~~l~~~~~~~ 310 (322)
T d1vzoa_ 233 TVDGEKNSQAEISRRILKSEPPY--PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPA 310 (322)
T ss_dssp SCTTSCCCHHHHHHHHHHCCCCC--CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCHHHHHTTCSCC
T ss_pred CCCCHHHHHHHHHHhcccCCCCC--cccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCCCHHHHHhCCCCc
Confidence 8765444333333 333333 345899999999999999999999753 359999999999999999887766666
Q ss_pred CCCCCcccCcc
Q 002051 947 LDAPLFATDTE 957 (975)
Q Consensus 947 ~~~p~~~~~~~ 957 (975)
...|+++.+.+
T Consensus 311 p~~p~~~~~~~ 321 (322)
T d1vzoa_ 311 PFKPVIRDELD 321 (322)
T ss_dssp SCCCCCCC-CC
T ss_pred CCCCCCCCCCC
Confidence 66799988764
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.4e-44 Score=393.01 Aligned_cols=237 Identities=24% Similarity=0.385 Sum_probs=194.8
Q ss_pred CCCcccccccccCCceEEEEEEEeCC-CeEEEEEEeccchhc-----------------c------------cc-----c
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGS-GQYFAMKAMDKGVML-----------------N------------RN-----K 712 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t-~~~vAiK~l~~~~~~-----------------~------------~~-----~ 712 (975)
.++|+++++||+|+||+||+|++..+ ++.||||+++..... . .. .
T Consensus 6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~ 85 (305)
T d1blxa_ 6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 85 (305)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence 36899999999999999999999765 678999998643100 0 00 1
Q ss_pred cCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCC
Q 002051 713 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 792 (975)
Q Consensus 713 ~~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~ 792 (975)
...++|++||||.++.+.... ......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++
T Consensus 86 ~~~~~~~~~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~ 164 (305)
T d1blxa_ 86 RETKLTLVFEHVDQDLTTYLD-KVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 164 (305)
T ss_dssp SEEEEEEEEECCSCBHHHHHH-HSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred cCceEEEEEEeccCCchhhhh-hccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchhhhh
Confidence 235789999999776554443 3445679999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCC
Q 002051 793 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 872 (975)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~ 872 (975)
.... .......+||+.|+|||++.+..|+.++|||||||++|+|++|++||.
T Consensus 165 ~~~~----------------------------~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~ 216 (305)
T d1blxa_ 165 IYSF----------------------------QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFR 216 (305)
T ss_dssp CCCG----------------------------GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred hhcc----------------------------cccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCC
Confidence 5321 112345689999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCCC-----C--------------------CCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 873 GKTRQKTFANILHKDLK-----F--------------------PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 873 ~~~~~~~~~~i~~~~~~-----~--------------------p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
+.+..+.+.++...... + .....+++.+++||.+||++||++||| ++|+|+
T Consensus 217 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~s----a~e~L~ 292 (305)
T d1blxa_ 217 GSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS----AYSALS 292 (305)
T ss_dssp CSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCC----HHHHHT
T ss_pred CCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcC----HHHHhc
Confidence 99988888877642100 0 012346889999999999999999999 999999
Q ss_pred CCCccCCCcc
Q 002051 928 HPFFKGVNWA 937 (975)
Q Consensus 928 Hp~f~~~~~~ 937 (975)
||||+++++.
T Consensus 293 Hpff~~i~~~ 302 (305)
T d1blxa_ 293 HPYFQDLERC 302 (305)
T ss_dssp SGGGTTCCCC
T ss_pred ChhhcCchhh
Confidence 9999998764
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-44 Score=395.44 Aligned_cols=231 Identities=28% Similarity=0.382 Sum_probs=188.9
Q ss_pred cccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------------ccccccCCeEEEEEec
Q 002051 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------------LNRNKTKTHVCLITDY 723 (975)
Q Consensus 673 i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------------~~~~~~~~~~~lV~Ey 723 (975)
.+++||+|+||+||+|+++.+|+.||||++++... +....+.+++||||||
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~ 81 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF 81 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence 46789999999999999999999999999864321 1222367789999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
|.|+++..+... ...+++..++.+++||+.||+|||++||+||||||+|||++.++.+||+|||+|+.....
T Consensus 82 ~~~~~~~~~~~~--~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~------ 153 (299)
T d1ua2a_ 82 METDLEVIIKDN--SLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP------ 153 (299)
T ss_dssp CSEEHHHHHTTC--CSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC------
T ss_pred hcchHHhhhhhc--ccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCCC------
Confidence 988766666543 456999999999999999999999999999999999999999999999999999654321
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 882 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~ 882 (975)
.......+||+.|+|||++.+. .|+.++|||||||++|+|++|.+||.+.+..+.+.+
T Consensus 154 ---------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~ 212 (299)
T d1ua2a_ 154 ---------------------NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTR 212 (299)
T ss_dssp ---------------------CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred ---------------------cccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHH
Confidence 1122346899999999998754 578999999999999999999999999999888888
Q ss_pred HHhcCCC--------------------CCC------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCc
Q 002051 883 ILHKDLK--------------------FPS------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936 (975)
Q Consensus 883 i~~~~~~--------------------~p~------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~ 936 (975)
+.+.... .+. ....++++++||++||++||++||| ++|+|+||||++...
T Consensus 213 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~s----a~e~L~Hp~f~~~p~ 288 (299)
T d1ua2a_ 213 IFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARIT----ATQALKMKYFSNRPG 288 (299)
T ss_dssp HHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCC----HHHHHTSGGGTSSSC
T ss_pred HHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcC----HHHHhCCHhhCCCCC
Confidence 7642110 000 1246789999999999999999999 999999999987543
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.3e-44 Score=390.71 Aligned_cols=235 Identities=27% Similarity=0.465 Sum_probs=194.5
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~lV~ 721 (975)
+++|+++++||+|+||+||+|+++.+|+.||||+++.... .....+..++||||
T Consensus 1 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~ 80 (298)
T d1gz8a_ 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 80 (298)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEE
Confidence 4689999999999999999999999999999999865321 12223678999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
||| ++++.+++.......+++..++.++.||+.||+|||++|||||||||+|||++.++.+||+|||+|+.....
T Consensus 81 e~~-~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~---- 155 (298)
T d1gz8a_ 81 EFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---- 155 (298)
T ss_dssp ECC-SEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCC----
T ss_pred eec-CCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceeccCC----
Confidence 999 556666666655677999999999999999999999999999999999999999999999999998654311
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC-CCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~ 880 (975)
.......+||+.|+|||++.... ++.++|||||||++|+|++|+.||.+.+..+.+
T Consensus 156 -----------------------~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~ 212 (298)
T d1gz8a_ 156 -----------------------VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 212 (298)
T ss_dssp -----------------------SBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred -----------------------cccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHH
Confidence 12233458999999999987765 478999999999999999999999999888887
Q ss_pred HHHHhcCCC------------------CCC---------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 881 ANILHKDLK------------------FPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 881 ~~i~~~~~~------------------~p~---------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
.++...... ++. ...+|.++++||++||++||++||| ++|||+||||++
T Consensus 213 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t----~~ell~H~ff~~ 288 (298)
T d1gz8a_ 213 FRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AKAALAHPFFQD 288 (298)
T ss_dssp HHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCC----HHHHHTSGGGTT
T ss_pred HHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcC----HHHHhCCHhhcc
Confidence 776542110 000 1246789999999999999999999 999999999987
Q ss_pred C
Q 002051 934 V 934 (975)
Q Consensus 934 ~ 934 (975)
+
T Consensus 289 ~ 289 (298)
T d1gz8a_ 289 V 289 (298)
T ss_dssp C
T ss_pred C
Confidence 6
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.1e-44 Score=385.54 Aligned_cols=225 Identities=28% Similarity=0.398 Sum_probs=189.5
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc--------------------------------cccccCCe
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--------------------------------NRNKTKTH 716 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~--------------------------------~~~~~~~~ 716 (975)
++|++.+.||+|+||+||+|+++.+|+.||||++.+..+. ....+.+.
T Consensus 4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~ 83 (273)
T d1xwsa_ 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 83 (273)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence 5799999999999999999999999999999998653211 11126678
Q ss_pred EEEEEeccCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-CCcEEEeeccCCCcc
Q 002051 717 VCLITDYCPG-GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLT 794 (975)
Q Consensus 717 ~~lV~Ey~~g-gsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~-~g~vkL~DFG~a~~~ 794 (975)
+|+||||+.+ +++.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++. ++.+||+|||+|+..
T Consensus 84 ~~lv~e~~~~~~~l~~~~~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~ 161 (273)
T d1xwsa_ 84 FVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 161 (273)
T ss_dssp EEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEEEEEeccCcchHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccceec
Confidence 9999999976 6888888764 56999999999999999999999999999999999999985 479999999999653
Q ss_pred CCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCC-CChhHHHHHHHHHHHHHhCCCCCCC
Q 002051 795 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRG 873 (975)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-~~k~DIWSLG~il~ell~G~~Pf~~ 873 (975)
.. ......+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.+
T Consensus 162 ~~-----------------------------~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~ 212 (273)
T d1xwsa_ 162 KD-----------------------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 212 (273)
T ss_dssp CS-----------------------------SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred cc-----------------------------ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCC
Confidence 21 12235689999999999987665 5679999999999999999999976
Q ss_pred CCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCc
Q 002051 874 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 936 (975)
Q Consensus 874 ~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~ 936 (975)
. ..+......++. .+|.++++||++||++||++||| ++|+|+||||+++..
T Consensus 213 ~------~~i~~~~~~~~~--~~s~~~~~li~~~L~~dp~~R~s----~~eil~hp~~~~~~~ 263 (273)
T d1xwsa_ 213 D------EEIIRGQVFFRQ--RVSSECQHLIRWCLALRPSDRPT----FEEIQNHPWMQDVLL 263 (273)
T ss_dssp H------HHHHHCCCCCSS--CCCHHHHHHHHHHTCSSGGGSCC----HHHHHTSGGGSSCCC
T ss_pred c------hHHhhcccCCCC--CCCHHHHHHHHHHccCCHhHCcC----HHHHhcCHhhCCCCC
Confidence 3 235555555543 57999999999999999999999 999999999997643
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.6e-43 Score=384.38 Aligned_cols=235 Identities=22% Similarity=0.264 Sum_probs=196.4
Q ss_pred cccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-----------------------hccccccCCeEEE
Q 002051 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-----------------------MLNRNKTKTHVCL 719 (975)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-----------------------~~~~~~~~~~~~l 719 (975)
.++++.++|++.++||+|+||+||+|.++.+|+.||||++++.. ++....+.+++||
T Consensus 11 ~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i 90 (287)
T d1opja_ 11 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 90 (287)
T ss_dssp TTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred ccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEE
Confidence 35677889999999999999999999999999999999986542 1122236778999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
|||||++|+|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.......
T Consensus 91 v~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~ 170 (287)
T d1opja_ 91 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 170 (287)
T ss_dssp EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSS
T ss_pred EeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccccceeecCCCCc
Confidence 99999999999999876667899999999999999999999999999999999999999999999999999976542211
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
.......|++.|+|||++.+..|+.++|||||||++|+|++|..||........
T Consensus 171 --------------------------~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~ 224 (287)
T d1opja_ 171 --------------------------TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 224 (287)
T ss_dssp --------------------------EEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH
T ss_pred --------------------------eeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHH
Confidence 112234588999999999999999999999999999999996666544444444
Q ss_pred HHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 880 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 880 ~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
+..++.....++.+..++..+.+||.+||+.||++||| ++||++
T Consensus 225 ~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps----~~ei~~ 268 (287)
T d1opja_ 225 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS----FAEIHQ 268 (287)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred HHHHHhcCCCCCCCccchHHHHHHHHHHcCCCHhHCcC----HHHHHH
Confidence 45555555666666678999999999999999999999 888764
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-43 Score=390.07 Aligned_cols=237 Identities=22% Similarity=0.322 Sum_probs=198.7
Q ss_pred cccccCCCcccccccccCCceEEEEEEEeCCCe-----EEEEEEeccch--------------------------hcccc
Q 002051 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQ-----YFAMKAMDKGV--------------------------MLNRN 711 (975)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~-----~vAiK~l~~~~--------------------------~~~~~ 711 (975)
.|.++.++|+++++||+|+||+||+|++..+++ .||+|.+.... ++...
T Consensus 31 kwei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~ 110 (325)
T d1rjba_ 31 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC 110 (325)
T ss_dssp GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEE
Confidence 356778899999999999999999999976653 69999875431 11122
Q ss_pred ccCCeEEEEEeccCCCCHHHHHhhCC---------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC
Q 002051 712 KTKTHVCLITDYCPGGELFLLLDRQP---------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 770 (975)
Q Consensus 712 ~~~~~~~lV~Ey~~ggsL~~~l~~~~---------------------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDI 770 (975)
.+.+++|||||||+||+|.+++.... ...+++..++.++.||+.||.|||++|||||||
T Consensus 111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDl 190 (325)
T d1rjba_ 111 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDL 190 (325)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred eeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence 26778999999999999999997642 135899999999999999999999999999999
Q ss_pred CCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCC
Q 002051 771 KPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS 850 (975)
Q Consensus 771 Kp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~ 850 (975)
||+|||++.++.+||+|||+|+....... ........||+.|||||++.+..|+.
T Consensus 191 Kp~Nill~~~~~~Kl~DFGla~~~~~~~~-------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~ 245 (325)
T d1rjba_ 191 AARNVLVTHGKVVKICDFGLARDIMSDSN-------------------------YVVRGNARLPVKWMAPESLFEGIYTI 245 (325)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTT-------------------------SEEETTEEECGGGCCHHHHHHCCCCH
T ss_pred chhccccccCCeEEEeeccccccccCCCc-------------------------eeeeccccCCCccCChHHHcCCCCCc
Confidence 99999999999999999999966432110 11223457899999999999999999
Q ss_pred hhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 851 AVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 851 k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
++|||||||++|||++ |.+||.+.+....+.+++.....++.+..+++++++||.+||+.||++||| ++||++|
T Consensus 246 ~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt----~~ei~~~ 320 (325)
T d1rjba_ 246 KSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPS----FPNLTSF 320 (325)
T ss_dssp HHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred ceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcC----HHHHHHH
Confidence 9999999999999997 899999887777788888887777777788999999999999999999999 8888865
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.1e-43 Score=378.11 Aligned_cols=233 Identities=22% Similarity=0.311 Sum_probs=186.6
Q ss_pred cccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhcc-------------------------ccccCCeE
Q 002051 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-------------------------RNKTKTHV 717 (975)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~-------------------------~~~~~~~~ 717 (975)
.|.++.++|++.+.||+|+||+||+|+.. ..||||+++...... .......+
T Consensus 2 dwei~~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~~~ 78 (276)
T d1uwha_ 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQL 78 (276)
T ss_dssp CCBCCTTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSC
T ss_pred CcccccccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEeccEE
Confidence 46788899999999999999999999753 359999986432100 01145678
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|||||||+||+|.+++... ...+++..+..++.||+.||+|||++|||||||||+|||++.++.+||+|||+|+.....
T Consensus 79 ~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~ 157 (276)
T d1uwha_ 79 AIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW 157 (276)
T ss_dssp EEEEECCCEEEHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC----
T ss_pred EEEEecCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeecccc
Confidence 9999999999999999754 346999999999999999999999999999999999999999999999999999664321
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC---CCCCChhHHHHHHHHHHHHHhCCCCCCCC
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPFRGK 874 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~---~~~~~k~DIWSLG~il~ell~G~~Pf~~~ 874 (975)
. .........||+.|||||++.+ ..|+.++|||||||++|||++|+.||.+.
T Consensus 158 ~-------------------------~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~ 212 (276)
T d1uwha_ 158 S-------------------------GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 212 (276)
T ss_dssp ---------------------------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred C-------------------------CcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCC
Confidence 1 0112245689999999999965 34788999999999999999999999987
Q ss_pred CHHHHHHHHHhcCCCCC----CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 875 TRQKTFANILHKDLKFP----SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~~p----~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
+....+..++......| ....+++.+.+||.+||..||++||| ++||++|
T Consensus 213 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt----~~~il~~ 266 (276)
T d1uwha_ 213 NNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPL----FPQILAS 266 (276)
T ss_dssp CCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred ChHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcC----HHHHHHH
Confidence 77666665555443333 23457889999999999999999999 8888765
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.9e-43 Score=391.70 Aligned_cols=259 Identities=26% Similarity=0.422 Sum_probs=194.6
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc--------------------------cccc------cCC
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--------------------------NRNK------TKT 715 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~--------------------------~~~~------~~~ 715 (975)
.++|+++++||+|+||+||+|.++.+|+.||||++++.... .... ...
T Consensus 17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~ 96 (346)
T d1cm8a_ 17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 96 (346)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence 46899999999999999999999999999999998753210 0000 234
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
++||||||| |.+|..++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+|++|||+|+...
T Consensus 97 ~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~ 172 (346)
T d1cm8a_ 97 DFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD 172 (346)
T ss_dssp CCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred eEEEEEecc-cccHHHHHHh---ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccccceeccC
Confidence 679999999 7788888865 469999999999999999999999999999999999999999999999999996543
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGK 874 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~ 874 (975)
. .....+||+.|+|||++.+. .++.++|||||||++|+|++|++||.+.
T Consensus 173 ~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~ 222 (346)
T d1cm8a_ 173 S------------------------------EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGS 222 (346)
T ss_dssp S------------------------------SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred C------------------------------ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCC
Confidence 1 12346799999999999764 5688999999999999999999999998
Q ss_pred CHHHHHHHHHhcCCCC-----------------------C------CCCCCcHHHHHHHHHhcccCccccCCChhhHHHH
Q 002051 875 TRQKTFANILHKDLKF-----------------------P------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 925 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~~-----------------------p------~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~el 925 (975)
+....+..+....... . .....++.+++||++||++||.+||| ++||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~t----a~ei 298 (346)
T d1cm8a_ 223 DHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVT----AGEA 298 (346)
T ss_dssp SHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCC----HHHH
T ss_pred ChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcC----HHHH
Confidence 8777766554311110 0 11346889999999999999999999 9999
Q ss_pred HcCCCccCCCcchhhccCCCCCCCCCcccCcccccccCCcchhhhhhcc
Q 002051 926 KKHPFFKGVNWALVRCMNPPELDAPLFATDTEKEYKVVDPGMQDLQQNV 974 (975)
Q Consensus 926 L~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 974 (975)
|+||||+++.+... .|.. +.+ +..+...+..++++++.+
T Consensus 299 L~Hp~f~~~~~~~~----~~~~--~~~----~~~~~~~~~~~~e~k~~~ 337 (346)
T d1cm8a_ 299 LAHPYFESLHDTED----EPQV--QKY----DDSFDDVDRTLDEWKRVT 337 (346)
T ss_dssp HHSGGGTTTC----------CC--CCC----CCC-----CCHHHHHHHH
T ss_pred hcChhhCcCCCccc----cccC--CCC----CCchhhhhcCHHHHHHHH
Confidence 99999998765432 2222 222 233445556666666543
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-43 Score=381.90 Aligned_cols=240 Identities=23% Similarity=0.343 Sum_probs=198.6
Q ss_pred cccccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------ccccccCCeE
Q 002051 661 DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------LNRNKTKTHV 717 (975)
Q Consensus 661 ~~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------~~~~~~~~~~ 717 (975)
...+.|+.++|+++++||+|+||+||+|.++ +++.||||+++.... +.. ...+.+
T Consensus 5 ~~~wei~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~-~~~~~~ 82 (272)
T d1qpca_ 5 EDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-VTQEPI 82 (272)
T ss_dssp TCTTBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEE-ECSSSC
T ss_pred CCCeecCHHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEee-eccCCe
Confidence 4567788899999999999999999999984 678899999875421 110 145667
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|||||||++|+|.+++.......+++..+..|+.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.....
T Consensus 83 ~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~ 162 (272)
T d1qpca_ 83 YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162 (272)
T ss_dssp EEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred EEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccccceEEccCC
Confidence 99999999999999886544446999999999999999999999999999999999999999999999999999765421
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 876 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~ 876 (975)
. ........||+.|+|||++.+..++.++|||||||++|||++ |.+||...+.
T Consensus 163 ~--------------------------~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~ 216 (272)
T d1qpca_ 163 E--------------------------YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 216 (272)
T ss_dssp C--------------------------EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH
T ss_pred c--------------------------cccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCH
Confidence 1 112234578999999999998899999999999999999998 5666777777
Q ss_pred HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc--CCCccC
Q 002051 877 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK--HPFFKG 933 (975)
Q Consensus 877 ~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~--Hp~f~~ 933 (975)
.+.+..+..+ ...+.+..++.++.+||.+||+.||++||| +++|++ |+||++
T Consensus 217 ~~~~~~i~~~-~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt----~~ei~~~L~~~fts 270 (272)
T d1qpca_ 217 PEVIQNLERG-YRMVRPDNCPEELYQLMRLCWKERPEDRPT----FDYLRSVLEDFFTA 270 (272)
T ss_dssp HHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHhc-CCCCCcccChHHHHHHHHHHcCCCHhHCcC----HHHHHHHhhhhhhc
Confidence 7777766654 344455668999999999999999999999 888887 788864
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.2e-42 Score=377.89 Aligned_cols=230 Identities=23% Similarity=0.374 Sum_probs=186.5
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhccc---------------------------cc----cCCe
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---------------------------NK----TKTH 716 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~~---------------------------~~----~~~~ 716 (975)
.++|++++.||+|+||+||+|.++.+|+.||||++++...... .. ....
T Consensus 6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~ 85 (277)
T d1o6ya_ 6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 85 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence 4679999999999999999999999999999999875421100 00 1235
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
+|||||||+|++|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++.++.++++|||.+.....
T Consensus 86 ~~lvmE~~~g~~L~~~~~~~--~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~ 163 (277)
T d1o6ya_ 86 PYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD 163 (277)
T ss_dssp EEEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC-
T ss_pred EEEEEECCCCCEehhhhccc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhhhcc
Confidence 89999999999999998774 5699999999999999999999999999999999999999999999999998865432
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 876 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~ 876 (975)
... ........+||+.|+|||++.+..|+.++|||||||++|+|++|++||.+.+.
T Consensus 164 ~~~------------------------~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~ 219 (277)
T d1o6ya_ 164 SGN------------------------SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 219 (277)
T ss_dssp ---------------------------------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccc------------------------cccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCH
Confidence 111 11223456899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCC--CCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 877 QKTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 877 ~~~~~~i~~~~~~~p~--~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
.+.+.+++.....++. ...+|..+.+||.+||++||.+||++ +++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~s---a~~l~ 268 (277)
T d1o6ya_ 220 VSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQT---AAEMR 268 (277)
T ss_dssp HHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSS---HHHHH
T ss_pred HHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhH---HHHHH
Confidence 9998888887665443 35689999999999999999999952 55554
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-42 Score=386.25 Aligned_cols=234 Identities=29% Similarity=0.492 Sum_probs=189.5
Q ss_pred CcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhcc--------------------------ccccCCeEEEEEec
Q 002051 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN--------------------------RNKTKTHVCLITDY 723 (975)
Q Consensus 670 ~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~--------------------------~~~~~~~~~lV~Ey 723 (975)
+|+.+++||+|+||+||+|+++.+|+.||||++.+..... ...+..++||||||
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey 100 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY 100 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEEC
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEec
Confidence 6999999999999999999999999999999986542110 01145578999999
Q ss_pred cCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC-cEEEeeccCCCccCCCCCC
Q 002051 724 CPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKPQL 800 (975)
Q Consensus 724 ~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g-~vkL~DFG~a~~~~~~~~~ 800 (975)
|+++ +...+.. .....+++..++.+++||+.||+|||++||+||||||+|||++.++ .+||+|||+++.....
T Consensus 101 ~~~~-~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~--- 176 (350)
T d1q5ka_ 101 VPET-VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--- 176 (350)
T ss_dssp CSEE-HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTT---
T ss_pred cCCc-cHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchhhccCC---
Confidence 9655 4443322 2345799999999999999999999999999999999999999775 8999999998654311
Q ss_pred CCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcC-CCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002051 801 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 879 (975)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~ 879 (975)
......+||+.|+|||.+.+ ..|+.++|||||||++|+|++|.+||.+.+..+.
T Consensus 177 -------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~ 231 (350)
T d1q5ka_ 177 -------------------------EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ 231 (350)
T ss_dssp -------------------------SCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHH
T ss_pred -------------------------cccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHH
Confidence 12234689999999999875 4689999999999999999999999999888887
Q ss_pred HHHHHhc-----------------CCCCCC----------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCcc
Q 002051 880 FANILHK-----------------DLKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932 (975)
Q Consensus 880 ~~~i~~~-----------------~~~~p~----------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~ 932 (975)
+..+... ...++. ....++++.+||.+||++||++||| +.|+|+||||+
T Consensus 232 l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t----a~e~L~Hp~f~ 307 (350)
T d1q5ka_ 232 LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT----PLEACAHSFFD 307 (350)
T ss_dssp HHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCC----HHHHHTSGGGG
T ss_pred HHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcC----HHHHhcCHhhc
Confidence 7776531 111111 1346889999999999999999999 99999999998
Q ss_pred CCCc
Q 002051 933 GVNW 936 (975)
Q Consensus 933 ~~~~ 936 (975)
++..
T Consensus 308 ~~~~ 311 (350)
T d1q5ka_ 308 ELRD 311 (350)
T ss_dssp GGGC
T ss_pred cccC
Confidence 7643
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-42 Score=380.63 Aligned_cols=236 Identities=24% Similarity=0.364 Sum_probs=187.0
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeC-----CCeEEEEEEeccchhc--------------------------c-cc
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVML--------------------------N-RN 711 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~-----t~~~vAiK~l~~~~~~--------------------------~-~~ 711 (975)
+.++.++|+++++||+|+||.||+|.+.. +++.||||+++..... . ..
T Consensus 8 wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~ 87 (299)
T d1ywna1 8 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT 87 (299)
T ss_dssp HBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeec
Confidence 45777899999999999999999999865 3578999998643100 0 01
Q ss_pred ccCCeEEEEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE
Q 002051 712 KTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL 777 (975)
Q Consensus 712 ~~~~~~~lV~Ey~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl 777 (975)
.....+|+|||||++|+|.+++.... ...+++..+..++.||+.||.|||++|||||||||+|||+
T Consensus 88 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl 167 (299)
T d1ywna1 88 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL 167 (299)
T ss_dssp STTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred cCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeE
Confidence 14557899999999999999997532 2358999999999999999999999999999999999999
Q ss_pred ecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHH
Q 002051 778 QGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWAL 857 (975)
Q Consensus 778 ~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSL 857 (975)
+.++.+||+|||+|+....... .......+||+.|+|||++.+..++.++|||||
T Consensus 168 ~~~~~~Kl~DFGla~~~~~~~~-------------------------~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~ 222 (299)
T d1ywna1 168 SEKNVVKICDFGLARDIYKDPD-------------------------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 222 (299)
T ss_dssp CGGGCEEECC------CCSCTT-------------------------SCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred CCCCcEEEccCcchhhcccccc-------------------------ccccCceeeCccccchhHhhcCCCCcccceeeh
Confidence 9999999999999976432111 112335679999999999999999999999999
Q ss_pred HHHHHHHHhC-CCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 858 GILLYEMLYG-YTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 858 G~il~ell~G-~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
||++|+|++| .+||.+......+..++.....++.+..+++++.+||.+||+.||++||| ++||++|
T Consensus 223 Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt----~~eil~~ 290 (299)
T d1ywna1 223 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT----FSELVEH 290 (299)
T ss_dssp HHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcC----HHHHHHH
Confidence 9999999986 57888876666666666655556666678999999999999999999999 8888876
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-42 Score=381.46 Aligned_cols=237 Identities=24% Similarity=0.331 Sum_probs=186.5
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhccc----------------------------------ccc
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR----------------------------------NKT 713 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~~~----------------------------------~~~ 713 (975)
.++|+++++||+|+||+||+|+++.+|+.||||++.+...... ...
T Consensus 9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~ 88 (318)
T d3blha1 9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 88 (318)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence 5789999999999999999999999999999999864421100 012
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 714 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 714 ~~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
..++|+|||||.++.+..+.. ....+++..++.+++||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 89 ~~~~~iv~e~~~~~~~~~~~~--~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~ 166 (318)
T d3blha1 89 KGSIYLVFDFCEHDLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA 166 (318)
T ss_dssp --CEEEEEECCCEEHHHHHTC--TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred CceEEEEEeccCCCccchhhh--cccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceeee
Confidence 457899999996655554433 246799999999999999999999999999999999999999999999999999966
Q ss_pred cCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCC
Q 002051 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFR 872 (975)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~ 872 (975)
...... .........+||+.|+|||++.+. .|+.++|||||||++|+|++|++||.
T Consensus 167 ~~~~~~-----------------------~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~ 223 (318)
T d3blha1 167 FSLAKN-----------------------SQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ 223 (318)
T ss_dssp CCC----------------------------CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred cccccc-----------------------cccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCC
Confidence 542111 011223456899999999999765 68999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCCCCCCC------------------------------CCCcHHHHHHHHHhcccCccccCCChhhH
Q 002051 873 GKTRQKTFANILHKDLKFPSS------------------------------TPTSLHAKQLMYRLLHRDPKSRLGSHEGA 922 (975)
Q Consensus 873 ~~~~~~~~~~i~~~~~~~p~~------------------------------~~~s~~~~~li~~~L~~dP~~R~t~~~~~ 922 (975)
+.+....+..+......++.. ...++++++||.+||++||++||| +
T Consensus 224 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~s----a 299 (318)
T d3blha1 224 GNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRID----S 299 (318)
T ss_dssp CSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCC----H
T ss_pred CCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcC----H
Confidence 988888777665422111110 012667889999999999999999 9
Q ss_pred HHHHcCCCccC
Q 002051 923 NEIKKHPFFKG 933 (975)
Q Consensus 923 ~elL~Hp~f~~ 933 (975)
+|+|+||||++
T Consensus 300 ~elL~Hpff~~ 310 (318)
T d3blha1 300 DDALNHDFFWS 310 (318)
T ss_dssp HHHHHSGGGSS
T ss_pred HHHHcChhhcc
Confidence 99999999975
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=5.2e-42 Score=374.54 Aligned_cols=232 Identities=22% Similarity=0.372 Sum_probs=188.2
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~lV~ 721 (975)
+++|+++++||+|+||+||+|+++ +|+.||||+++.... +.......++|++|
T Consensus 1 ~~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~ 79 (286)
T d1ob3a_ 1 MEKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF 79 (286)
T ss_dssp CCSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEE
T ss_pred CCCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEE
Confidence 368999999999999999999985 789999999865421 11222678899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
||+.++.+..+... .+.+++..++.++.||+.||+|||++|||||||||+|||++.++.+||+|||.|......
T Consensus 80 e~~~~~~~~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~---- 153 (286)
T d1ob3a_ 80 EHLDQDLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP---- 153 (286)
T ss_dssp ECCSEEHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred EeehhhhHHHHHhh--cCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccC----
Confidence 99977666666654 367999999999999999999999999999999999999999999999999998654311
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 880 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~ 880 (975)
........|++.|+|||.+.+. .++.++|||||||++|+|++|++||.+.+..+.+
T Consensus 154 -----------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~ 210 (286)
T d1ob3a_ 154 -----------------------VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQL 210 (286)
T ss_dssp -------------------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred -----------------------ccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHH
Confidence 1122345789999999999764 5689999999999999999999999998888887
Q ss_pred HHHHhcCCC------------------C---------CCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccC
Q 002051 881 ANILHKDLK------------------F---------PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 933 (975)
Q Consensus 881 ~~i~~~~~~------------------~---------p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~ 933 (975)
.++...... + .....+++.+++||++||++||++||| ++|||+||||+.
T Consensus 211 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s----~~ell~Hp~f~~ 286 (286)
T d1ob3a_ 211 MRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRIT----AKQALEHAYFKE 286 (286)
T ss_dssp HHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCC----HHHHHTSGGGGC
T ss_pred HHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcC----HHHHhcCcccCc
Confidence 776541100 0 012346889999999999999999999 999999999974
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=4.1e-42 Score=382.96 Aligned_cols=233 Identities=23% Similarity=0.362 Sum_probs=187.4
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh----------------------cccc--ccCCeEEEEEec
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM----------------------LNRN--KTKTHVCLITDY 723 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~----------------------~~~~--~~~~~~~lV~Ey 723 (975)
.++|+++++||+|+||+||+|+++.+|+.||||++++... .... ....++|+||||
T Consensus 34 ~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~ 113 (328)
T d3bqca1 34 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH 113 (328)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEEC
T ss_pred CcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEee
Confidence 4689999999999999999999999999999999875421 1111 145679999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC-cEEEeeccCCCccCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g-~vkL~DFG~a~~~~~~~~~~~ 802 (975)
|.+++|..+. ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+|+.....
T Consensus 114 ~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~----- 183 (328)
T d3bqca1 114 VNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG----- 183 (328)
T ss_dssp CCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTT-----
T ss_pred cCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceeccCC-----
Confidence 9999987653 4599999999999999999999999999999999999999655 6999999999654321
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCC-CCCChhHHHHHHHHHHHHHhCCCCCCCCCH-HHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTR-QKTF 880 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~k~DIWSLG~il~ell~G~~Pf~~~~~-~~~~ 880 (975)
......+||+.|+|||.+.+. .++.++||||+||++|+|++|..||..... ....
T Consensus 184 -----------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~ 240 (328)
T d3bqca1 184 -----------------------QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 240 (328)
T ss_dssp -----------------------CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHH
T ss_pred -----------------------CcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHH
Confidence 122356799999999998875 479999999999999999999999976443 2222
Q ss_pred HHHHh-------------cC----------------------CCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHH
Q 002051 881 ANILH-------------KD----------------------LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 925 (975)
Q Consensus 881 ~~i~~-------------~~----------------------~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~el 925 (975)
..+.. .. ...+....+++++++||++||++||.+||| ++|+
T Consensus 241 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~t----a~e~ 316 (328)
T d3bqca1 241 VRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLT----AREA 316 (328)
T ss_dssp HHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCC----HHHH
T ss_pred HHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcC----HHHH
Confidence 22211 00 001111336889999999999999999999 9999
Q ss_pred HcCCCccCCCcc
Q 002051 926 KKHPFFKGVNWA 937 (975)
Q Consensus 926 L~Hp~f~~~~~~ 937 (975)
|+||||+++.|.
T Consensus 317 L~Hp~F~~v~~~ 328 (328)
T d3bqca1 317 MEHPYFYTVVKD 328 (328)
T ss_dssp HTSGGGTTSCCC
T ss_pred hcCcccCCCCCC
Confidence 999999999884
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-41 Score=364.00 Aligned_cols=229 Identities=23% Similarity=0.342 Sum_probs=195.2
Q ss_pred cCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------ccccccCCeEEEEEec
Q 002051 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------LNRNKTKTHVCLITDY 723 (975)
Q Consensus 667 ~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------~~~~~~~~~~~lV~Ey 723 (975)
+.++|+++++||+|+||+||+|++ .+++.||||++++... +....+.+.+|+||||
T Consensus 2 ~~~~~~~~~~iG~G~fg~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey 80 (258)
T d1k2pa_ 2 DPKDLTFLKELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 80 (258)
T ss_dssp CCCCCCCCCCCCEETTEEEEEEEE-TTTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEEC
T ss_pred ChHHCEEeEEEecCCCeEEEEEEE-CCCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEc
Confidence 457899999999999999999998 4788999999876431 1222367889999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
|++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+......
T Consensus 81 ~~~g~l~~~~~~~-~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~----- 154 (258)
T d1k2pa_ 81 MANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE----- 154 (258)
T ss_dssp CTTEEHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSS-----
T ss_pred cCCCcHHHhhhcc-ccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheeccCCC-----
Confidence 9999999997653 3568999999999999999999999999999999999999999999999999996543211
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFAN 882 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~~ 882 (975)
........||+.|+|||++.+..++.++|||||||++|||++ |+.||.+.+..++..+
T Consensus 155 ---------------------~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~ 213 (258)
T d1k2pa_ 155 ---------------------YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH 213 (258)
T ss_dssp ---------------------CCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHH
T ss_pred ---------------------ceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHH
Confidence 112234578999999999999999999999999999999997 8999999999888888
Q ss_pred HHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 883 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 883 i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
+..+. ..+.+...+..+.+||.+||+.||++||| +++|++|
T Consensus 214 i~~~~-~~~~p~~~~~~l~~li~~cl~~dP~~RPt----~~eil~~ 254 (258)
T d1k2pa_ 214 IAQGL-RLYRPHLASEKVYTIMYSCWHEKADERPT----FKILLSN 254 (258)
T ss_dssp HHTTC-CCCCCTTCCHHHHHHHHHTTCSSGGGSCC----HHHHHHH
T ss_pred HHhCC-CCCCcccccHHHHHHHHHHccCCHhHCcC----HHHHHHH
Confidence 87653 44555678899999999999999999999 8888876
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.4e-42 Score=382.49 Aligned_cols=234 Identities=25% Similarity=0.398 Sum_probs=184.3
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-------------cc------------cc-----ccCCeEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-------------LN------------RN-----KTKTHVC 718 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-------------~~------------~~-----~~~~~~~ 718 (975)
++|+++++||+|+||+||+|.++.+|+.||||++++... +. .. ....++|
T Consensus 8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~ 87 (345)
T d1pmea_ 8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 87 (345)
T ss_dssp TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEE
Confidence 579999999999999999999999999999999864320 00 00 0123456
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
++|+ +.||+|.+++.. ..+++..++.++.||+.||+|||++|||||||||+|||++.++.+||+|||+|.......
T Consensus 88 l~~~-~~~g~L~~~l~~---~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~ 163 (345)
T d1pmea_ 88 LVTH-LMGADLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 163 (345)
T ss_dssp EEEE-CCCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred EEEe-ecCCchhhhhhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceeeccCCC
Confidence 6555 559999999976 359999999999999999999999999999999999999999999999999996643211
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhc-CCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 877 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~ 877 (975)
. ........+||+.|+|||++. +..++.++||||+||++|+|++|+.||.+.+..
T Consensus 164 ~------------------------~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~ 219 (345)
T d1pmea_ 164 D------------------------HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 219 (345)
T ss_dssp C------------------------BCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred c------------------------cceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHH
Confidence 1 011234568999999999984 456788999999999999999999999988776
Q ss_pred HHHHHHHhcCC--------------------CCC---------CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 878 KTFANILHKDL--------------------KFP---------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 878 ~~~~~i~~~~~--------------------~~p---------~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
+.......... ..+ ....++.++++||.+||++||.+||| ++|+|+|
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t----a~e~L~h 295 (345)
T d1pmea_ 220 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE----VEQALAH 295 (345)
T ss_dssp HHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCC----HHHHHTS
T ss_pred HHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcC----HHHHhcC
Confidence 66555432100 000 11346788999999999999999999 9999999
Q ss_pred CCccCC
Q 002051 929 PFFKGV 934 (975)
Q Consensus 929 p~f~~~ 934 (975)
|||+..
T Consensus 296 pf~~~~ 301 (345)
T d1pmea_ 296 PYLEQY 301 (345)
T ss_dssp GGGTTT
T ss_pred HhhccC
Confidence 999865
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-41 Score=366.74 Aligned_cols=230 Identities=21% Similarity=0.356 Sum_probs=184.5
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------ccccccCCeEEEEEe
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------LNRNKTKTHVCLITD 722 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------~~~~~~~~~~~lV~E 722 (975)
|+.++|+++++||+|+||+||+|+++ +++.||||++++... +........+|||||
T Consensus 2 idp~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E 80 (263)
T d1sm2a_ 2 IDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE 80 (263)
T ss_dssp BCCSCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred CChHHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEE
Confidence 45678999999999999999999985 567899999875421 122225778999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCC
Q 002051 723 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 723 y~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
||++|+|.+++... ...+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||+|+......
T Consensus 81 ~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~---- 155 (263)
T d1sm2a_ 81 FMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ---- 155 (263)
T ss_dssp CCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC-------------
T ss_pred ecCCCcHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchheeccCCC----
Confidence 99999999998764 3568999999999999999999999999999999999999999999999999996643211
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFA 881 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~ 881 (975)
........||+.|+|||++.+..|+.++|||||||++|||++ |.+||...+..+++.
T Consensus 156 ----------------------~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~ 213 (263)
T d1sm2a_ 156 ----------------------YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 213 (263)
T ss_dssp -------------------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHH
T ss_pred ----------------------ceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHH
Confidence 111223578999999999999999999999999999999998 677788888777777
Q ss_pred HHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 882 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 882 ~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
.+..+. ..+.+..+++++.+||.+||+.||++||| ++||++|
T Consensus 214 ~i~~~~-~~~~p~~~~~~l~~li~~cl~~~p~~Rps----~~~il~~ 255 (263)
T d1sm2a_ 214 DISTGF-RLYKPRLASTHVYQIMNHCWKERPEDRPA----FSRLLRQ 255 (263)
T ss_dssp HHHHTC-CCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HHHhcC-CCCCccccCHHHHHHHHHHccCCHhHCcC----HHHHHHH
Confidence 776653 33444567899999999999999999999 8888875
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-41 Score=383.55 Aligned_cols=262 Identities=23% Similarity=0.409 Sum_probs=192.5
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------cccc------ccCC
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRN------KTKT 715 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~------~~~~ 715 (975)
.++|+++++||+|+||+||+|+++.+|+.||||++.+... .... ....
T Consensus 16 ~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~ 95 (355)
T d2b1pa1 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 95 (355)
T ss_dssp ETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCc
Confidence 4689999999999999999999999999999999864321 0000 1347
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
++|+|||||.+ ++.+.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+|++|||+++...
T Consensus 96 ~~~iv~Ey~~~-~l~~~~~----~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~ 170 (355)
T d2b1pa1 96 DVYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170 (355)
T ss_dssp EEEEEEECCSE-EHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred eeEEEEeccch-HHHHhhh----cCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhhhccc
Confidence 89999999955 5655553 358999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
.. ......+||+.|+|||++.+..++.++||||+||++|+|++|++||.+.+
T Consensus 171 ~~----------------------------~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~ 222 (355)
T d2b1pa1 171 TS----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 222 (355)
T ss_dssp --------------------------------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cc----------------------------cccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCC
Confidence 11 12234579999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHhcC----------------------CCCCCC------------------CCCcHHHHHHHHHhcccCcccc
Q 002051 876 RQKTFANILHKD----------------------LKFPSS------------------TPTSLHAKQLMYRLLHRDPKSR 915 (975)
Q Consensus 876 ~~~~~~~i~~~~----------------------~~~p~~------------------~~~s~~~~~li~~~L~~dP~~R 915 (975)
......+++... ...... ...+.++++||++||.+||++|
T Consensus 223 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R 302 (355)
T d2b1pa1 223 YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 302 (355)
T ss_dssp HHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTS
T ss_pred HHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHC
Confidence 777766654311 100000 1135678999999999999999
Q ss_pred CCChhhHHHHHcCCCccCCCcchhhccCCCCCCCCCcccCcccccccCCcchhhhhhcc
Q 002051 916 LGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDTEKEYKVVDPGMQDLQQNV 974 (975)
Q Consensus 916 ~t~~~~~~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 974 (975)
|| |+|||+||||+..-+.......+|.+ .+.++++.+-.++++++.|
T Consensus 303 ~t----a~elL~Hpw~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 349 (355)
T d2b1pa1 303 IS----VDDALQHPYINVWYDPAEVEAPPPQI--------YDKQLDEREHTIEEWKELI 349 (355)
T ss_dssp CC----HHHHHTSTTTGGGCCHHHHTCCCC---------------CCCCCCHHHHHHHH
T ss_pred cC----HHHHhcCcccCCCCCcccccCCCCCC--------CCcchhhhhcCHHHHHHHH
Confidence 99 99999999999754443333333322 3334445555666665543
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3e-41 Score=370.24 Aligned_cols=235 Identities=23% Similarity=0.320 Sum_probs=182.4
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCCe---EEEEEEeccch-------------------------hccccccCCe
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGV-------------------------MLNRNKTKTH 716 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~---~vAiK~l~~~~-------------------------~~~~~~~~~~ 716 (975)
.+..++|++.+.||+|+||+||+|.++.+++ .||||.+.... ++........
T Consensus 22 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~ 101 (299)
T d1jpaa_ 22 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTP 101 (299)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred hhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE
Confidence 4667789999999999999999999987664 68999875431 1112225678
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
+|||||||+||+|.+++... .+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus 102 ~~iv~Ey~~~g~L~~~~~~~-~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~ 180 (299)
T d1jpaa_ 102 VMIITEFMENGSLDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED 180 (299)
T ss_dssp CEEEEECCTTEEHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEEEEEecCCCcceeeeccc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccceEccC
Confidence 89999999999999988764 35699999999999999999999999999999999999999999999999999976542
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCC
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 875 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~ 875 (975)
.... ..........||+.|||||++.+..|+.++|||||||++|||++ |.+||.+.+
T Consensus 181 ~~~~----------------------~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~ 238 (299)
T d1jpaa_ 181 DTSD----------------------PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMT 238 (299)
T ss_dssp -------------------------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred CCCc----------------------ceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCC
Confidence 1110 00111223468999999999999999999999999999999997 899999998
Q ss_pred HHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 876 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 876 ~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
..+++..+..+ ..++.+..++..+.+||.+||+.||++||| +.||++
T Consensus 239 ~~~~~~~i~~~-~~~~~~~~~~~~l~~li~~cl~~~P~~RPs----~~ei~~ 285 (299)
T d1jpaa_ 239 NQDVINAIEQD-YRLPPPMDCPSALHQLMLDCWQKDRNHRPK----FGQIVN 285 (299)
T ss_dssp HHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSTTTSCC----HHHHHH
T ss_pred HHHHHHHHHcC-CCCCCCccchHHHHHHHHHHcCCCHhHCcC----HHHHHH
Confidence 88887777654 445555678999999999999999999999 555543
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-41 Score=369.60 Aligned_cols=240 Identities=22% Similarity=0.343 Sum_probs=194.0
Q ss_pred ccccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------ccccccCCeEE
Q 002051 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------LNRNKTKTHVC 718 (975)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------~~~~~~~~~~~ 718 (975)
..+.|+.++|++.+.||+|+||+||+|+++.+ +.||||+++.... +... ..+.+|
T Consensus 10 ~~~~i~~~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~-~~~~~~ 87 (285)
T d1fmka3 10 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIY 87 (285)
T ss_dssp TCSBCCGGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEE-CSSSCE
T ss_pred cceEcCHHHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEE-ecCCeE
Confidence 34667888999999999999999999998655 5699999865421 1111 345678
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCC
Q 002051 719 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 798 (975)
Q Consensus 719 lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~ 798 (975)
+|||||++|+|..++.......+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+......
T Consensus 88 lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~ 167 (285)
T d1fmka3 88 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 167 (285)
T ss_dssp EEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred EEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccchhhhccCCC
Confidence 99999999999999876444569999999999999999999999999999999999999999999999999996543111
Q ss_pred CCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhC-CCCCCCCCHH
Q 002051 799 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYG-YTPFRGKTRQ 877 (975)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G-~~Pf~~~~~~ 877 (975)
........||+.|+|||++....++.++|||||||++|||++| .+||.+....
T Consensus 168 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~ 221 (285)
T d1fmka3 168 --------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR 221 (285)
T ss_dssp ----------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH
T ss_pred --------------------------ceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHH
Confidence 0112335789999999999999999999999999999999985 5666667777
Q ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc--CCCccCC
Q 002051 878 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK--HPFFKGV 934 (975)
Q Consensus 878 ~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~--Hp~f~~~ 934 (975)
+.+..+..+ ...+.+..++.++++||.+||+.||++||| +++|+. |+||++.
T Consensus 222 ~~~~~i~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~Rps----~~~i~~~L~~~~~~~ 275 (285)
T d1fmka3 222 EVLDQVERG-YRMPCPPECPESLHDLMCQCWRKEPEERPT----FEYLQAFLEDYFTST 275 (285)
T ss_dssp HHHHHHHTT-CCCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHHHHTTTSCS
T ss_pred HHHHHHHhc-CCCCCCcccCHHHHHHHHHHcccCHhHCcC----HHHHHHHHhhhhcCC
Confidence 777666654 455566678999999999999999999999 888887 8899765
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-41 Score=369.34 Aligned_cols=239 Identities=20% Similarity=0.263 Sum_probs=192.7
Q ss_pred ccCCCccccc-ccccCCceEEEEEEEeC--CCeEEEEEEeccch-------------------------hccccccCCeE
Q 002051 666 INLQHFRPIK-PLGSGDTGSVHLVELCG--SGQYFAMKAMDKGV-------------------------MLNRNKTKTHV 717 (975)
Q Consensus 666 i~~~~y~i~~-~LG~G~fG~Vy~a~~~~--t~~~vAiK~l~~~~-------------------------~~~~~~~~~~~ 717 (975)
+..++|.+.+ +||+|+||+||+|.++. ++..||||++++.. ++... ..+.+
T Consensus 5 l~~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~-~~~~~ 83 (285)
T d1u59a_ 5 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEAL 83 (285)
T ss_dssp CCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSE
T ss_pred ecccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeee-ccCeE
Confidence 4456788888 49999999999998754 45689999986532 01111 34568
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCC
Q 002051 718 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 797 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~ 797 (975)
|||||||+||+|.+++... ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.....
T Consensus 84 ~lvmE~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~ 162 (285)
T d1u59a_ 84 MLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 162 (285)
T ss_dssp EEEEECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred EEEEEeCCCCcHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhccccc
Confidence 9999999999999998653 356999999999999999999999999999999999999999999999999999765422
Q ss_pred CCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002051 798 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 876 (975)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~ 876 (975)
... ........||+.|+|||++.+..++.++|||||||++|||++ |..||.+.+.
T Consensus 163 ~~~------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~ 218 (285)
T d1u59a_ 163 DSY------------------------YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG 218 (285)
T ss_dssp SCE------------------------ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT
T ss_pred ccc------------------------cccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCH
Confidence 110 112234578999999999999999999999999999999997 9999999888
Q ss_pred HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCcc
Q 002051 877 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932 (975)
Q Consensus 877 ~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~ 932 (975)
.+++..+..+. .++.+..+++++.+||.+||+.||++|||+.+ +.+.|+|+|+.
T Consensus 219 ~~~~~~i~~~~-~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~-i~~~L~~~~~~ 272 (285)
T d1u59a_ 219 PEVMAFIEQGK-RMECPPECPPELYALMSDCWIYKWEDRPDFLT-VEQRMRACYYS 272 (285)
T ss_dssp HHHHHHHHTTC-CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHcCC-CCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHH-HHHHHHHHHHH
Confidence 88777776654 33444568999999999999999999999332 33447788763
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-41 Score=379.98 Aligned_cols=230 Identities=26% Similarity=0.395 Sum_probs=186.3
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------cccc------------c-----cCCe
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------LNRN------------K-----TKTH 716 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------~~~~------------~-----~~~~ 716 (975)
.++|+++++||+|+||+||+|+++.+|+.||||++++... +... . ....
T Consensus 17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~ 96 (348)
T d2gfsa1 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 96 (348)
T ss_dssp ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence 3689999999999999999999999999999999865320 0000 0 1223
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
.++||+||.||+|.+++.. ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+|++|||++....
T Consensus 97 ~~~i~~~~~gg~L~~~~~~---~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~- 172 (348)
T d2gfsa1 97 DVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD- 172 (348)
T ss_dssp CCEEEEECCSEEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCT-
T ss_pred eEEEEEeecCCchhhhccc---ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchhcccC-
Confidence 3555667779999999965 469999999999999999999999999999999999999999999999999985432
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC-CCChhHHHHHHHHHHHHHhCCCCCCCCC
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKT 875 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~~~k~DIWSLG~il~ell~G~~Pf~~~~ 875 (975)
.......||+.|+|||++.+.. ++.++|||||||++|+|++|.+||.+.+
T Consensus 173 -----------------------------~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~ 223 (348)
T d2gfsa1 173 -----------------------------DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 223 (348)
T ss_dssp -----------------------------GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred -----------------------------cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCC
Confidence 1223457999999999987754 5889999999999999999999999988
Q ss_pred HHHHHHHHHhcCCCC-----------------------CC------CCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 876 RQKTFANILHKDLKF-----------------------PS------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 876 ~~~~~~~i~~~~~~~-----------------------p~------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
.......+....... +. ...+++++++||++||++||.+||| ++|+|
T Consensus 224 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~t----a~elL 299 (348)
T d2gfsa1 224 HIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT----AAQAL 299 (348)
T ss_dssp HHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCC----HHHHH
T ss_pred HHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcC----HHHHh
Confidence 887777765422111 10 1346889999999999999999999 99999
Q ss_pred cCCCccCC
Q 002051 927 KHPFFKGV 934 (975)
Q Consensus 927 ~Hp~f~~~ 934 (975)
+||||+..
T Consensus 300 ~Hp~f~~~ 307 (348)
T d2gfsa1 300 AHAYFAQY 307 (348)
T ss_dssp TSGGGTTT
T ss_pred cCHhhCCC
Confidence 99999875
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-40 Score=365.09 Aligned_cols=234 Identities=21% Similarity=0.378 Sum_probs=191.3
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh--------------------------ccccccCCeEEEEE
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCLIT 721 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~lV~ 721 (975)
+++|+++++||+|+||+||+|+++.+|+.||||+++.... .....+..++++||
T Consensus 1 ~~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~ 80 (292)
T d1unla_ 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_dssp CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEe
Confidence 4689999999999999999999999999999999864321 11122678899999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCC
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 801 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 801 (975)
+|+.|++|..++... +.+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||.|+......
T Consensus 81 ~~~~~~~l~~~~~~~--~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~--- 155 (292)
T d1unla_ 81 EFCDQDLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV--- 155 (292)
T ss_dssp ECCSEEHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCC---
T ss_pred eeccccccccccccc--cccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCCC---
Confidence 999999998888764 668999999999999999999999999999999999999999999999999997643211
Q ss_pred CCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC-CCChhHHHHHHHHHHHHHhCCCCC-CCCCHHHH
Q 002051 802 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPF-RGKTRQKT 879 (975)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~~~k~DIWSLG~il~ell~G~~Pf-~~~~~~~~ 879 (975)
.......+++.|+|||++.+.. ++.++|||||||++|+|++|+.|| .+.+..+.
T Consensus 156 ------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~ 211 (292)
T d1unla_ 156 ------------------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ 211 (292)
T ss_dssp ------------------------SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHH
T ss_pred ------------------------ccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHH
Confidence 1223346788999999998765 689999999999999999998885 55566666
Q ss_pred HHHHHhcCCC---------------------------CCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCcc
Q 002051 880 FANILHKDLK---------------------------FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932 (975)
Q Consensus 880 ~~~i~~~~~~---------------------------~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~ 932 (975)
+..+...... ......++..+.+||++||++||.+||| ++|+|+||||+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~s----a~e~L~Hp~f~ 287 (292)
T d1unla_ 212 LKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRIS----AEEALQHPYFS 287 (292)
T ss_dssp HHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCC----HHHHTTSGGGS
T ss_pred HHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcC----HHHHhcChhhc
Confidence 6655431100 0011346789999999999999999999 99999999998
Q ss_pred CC
Q 002051 933 GV 934 (975)
Q Consensus 933 ~~ 934 (975)
++
T Consensus 288 ~~ 289 (292)
T d1unla_ 288 DF 289 (292)
T ss_dssp SC
T ss_pred CC
Confidence 64
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-41 Score=364.90 Aligned_cols=226 Identities=22% Similarity=0.303 Sum_probs=183.3
Q ss_pred cccccCCceEEEEEEEe--CCCeEEEEEEeccchh--------------------------ccccccCCeEEEEEeccCC
Q 002051 675 KPLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVM--------------------------LNRNKTKTHVCLITDYCPG 726 (975)
Q Consensus 675 ~~LG~G~fG~Vy~a~~~--~t~~~vAiK~l~~~~~--------------------------~~~~~~~~~~~lV~Ey~~g 726 (975)
++||+|+||+||+|.+. .+++.||||+++.... .... ..+..|||||||++
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~-~~~~~~lvmE~~~~ 91 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAEL 91 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTT
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEe-ccCCEEEEEEcCCC
Confidence 47999999999999875 3568899999864321 0111 34567999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCCcch
Q 002051 727 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 806 (975)
Q Consensus 727 gsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 806 (975)
|+|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.......
T Consensus 92 g~L~~~l~~~--~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~------- 162 (277)
T d1xbba_ 92 GPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN------- 162 (277)
T ss_dssp EEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCS-------
T ss_pred CcHHHHHhhc--cCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhcccccc-------
Confidence 9999999875 5699999999999999999999999999999999999999999999999999976432111
Q ss_pred hhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHh
Q 002051 807 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILH 885 (975)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~~~~~i~~ 885 (975)
.........||+.|+|||++.+..++.++|||||||++|||++ |.+||.+.+..++...+.+
T Consensus 163 -----------------~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~ 225 (277)
T d1xbba_ 163 -----------------YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 225 (277)
T ss_dssp -----------------EEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT
T ss_pred -----------------ccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHc
Confidence 0112234578999999999999999999999999999999997 9999999888877777765
Q ss_pred cCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHH---HcCCCcc
Q 002051 886 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI---KKHPFFK 932 (975)
Q Consensus 886 ~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~el---L~Hp~f~ 932 (975)
+. .++.+..++.++.+||.+||+.||++||| +++| |+|+|+.
T Consensus 226 ~~-~~~~p~~~~~~~~~li~~cl~~dp~~RPs----~~~i~~~L~~~~~~ 270 (277)
T d1xbba_ 226 GE-RMGCPAGCPREMYDLMNLCWTYDVENRPG----FAAVELRLRNYYYD 270 (277)
T ss_dssp TC-CCCCCTTCCHHHHHHHHHHTCSSTTTSCC----HHHHHHHHHHHHHH
T ss_pred CC-CCCCCcccCHHHHHHHHHHcCCCHhHCcC----HHHHHHHhhCHHhh
Confidence 43 34445568999999999999999999999 6665 6777664
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-41 Score=363.75 Aligned_cols=232 Identities=26% Similarity=0.375 Sum_probs=185.8
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeCC---CeEEEEEEeccch-------------------------hccccccCC
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGV-------------------------MLNRNKTKT 715 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t---~~~vAiK~l~~~~-------------------------~~~~~~~~~ 715 (975)
++|+.++|++.+.||+|+||+||+|.+..+ +..||||.++... ++.. ...+
T Consensus 2 ~ei~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~-~~~~ 80 (273)
T d1mp8a_ 2 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITEN 80 (273)
T ss_dssp CBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEE-ECSS
T ss_pred CCcCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEE-EecC
Confidence 567778999999999999999999998754 4579999886431 0111 1456
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
++|||||||++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+...
T Consensus 81 ~~~iv~E~~~~g~l~~~~~~~-~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~ 159 (273)
T d1mp8a_ 81 PVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 159 (273)
T ss_dssp SCEEEEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred eEEEEEEeccCCcHHhhhhcc-CCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhheecc
Confidence 789999999999999988764 3569999999999999999999999999999999999999999999999999997643
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 874 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~ 874 (975)
... ........||+.|+|||++.+..|+.++|||||||++|||++ |.+||.+.
T Consensus 160 ~~~--------------------------~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~ 213 (273)
T d1mp8a_ 160 DST--------------------------YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 213 (273)
T ss_dssp -------------------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred CCc--------------------------ceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCC
Confidence 211 112234568999999999999999999999999999999997 89999999
Q ss_pred CHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 875 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
+..+++..+..+. ..+.+..+++.+.+||.+||..||++||| +.||++|
T Consensus 214 ~~~~~~~~i~~~~-~~~~~~~~~~~~~~li~~cl~~dp~~Rps----~~ei~~~ 262 (273)
T d1mp8a_ 214 KNNDVIGRIENGE-RLPMPPNCPPTLYSLMTKCWAYDPSRRPR----FTELKAQ 262 (273)
T ss_dssp CGGGHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred CHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHcCCCHhHCcC----HHHHHHH
Confidence 8888888877654 34455678999999999999999999999 8888765
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.3e-41 Score=360.17 Aligned_cols=228 Identities=22% Similarity=0.381 Sum_probs=186.9
Q ss_pred cccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc----------------------ccc-ccCCeEEE
Q 002051 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML----------------------NRN-KTKTHVCL 719 (975)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~----------------------~~~-~~~~~~~l 719 (975)
+|.++.++|+++++||+|+||.||+|++ .|+.||||++++.... ... ...+.+||
T Consensus 1 ~w~i~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~i~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~l 78 (262)
T d1byga_ 1 GWALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 78 (262)
T ss_dssp CCBCCGGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEE
T ss_pred CCccCHHHeEEeEEEecCCCeEEEEEEE--CCeEEEEEEECcHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEE
Confidence 5778999999999999999999999998 4789999999765311 111 13456899
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCC
Q 002051 720 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 720 V~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 799 (975)
|||||++|+|.+++.+.....+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++....
T Consensus 79 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~--- 155 (262)
T d1byga_ 79 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS--- 155 (262)
T ss_dssp EECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred EEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeecccccceecCC---
Confidence 99999999999999765344689999999999999999999999999999999999999999999999999865331
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK 878 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~~~~ 878 (975)
......+|+.|+|||++.+..++.++|||||||++|||++ |++||...+..+
T Consensus 156 ---------------------------~~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~ 208 (262)
T d1byga_ 156 ---------------------------TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD 208 (262)
T ss_dssp ---------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG
T ss_pred ---------------------------CCccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHH
Confidence 1123467899999999999999999999999999999997 799999888888
Q ss_pred HHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 879 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 879 ~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
++..+.++ ..++.+..+++.+.+||.+||+.||.+||| +.+|++
T Consensus 209 ~~~~i~~~-~~~~~~~~~~~~~~~li~~cl~~dP~~Rps----~~~l~~ 252 (262)
T d1byga_ 209 VVPRVEKG-YKMDAPDGCPPAVYEVMKNCWHLDAAMRPS----FLQLRE 252 (262)
T ss_dssp HHHHHTTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred HHHHHHcC-CCCCCCccCCHHHHHHHHHHcccCHhHCcC----HHHHHH
Confidence 77777654 344455568899999999999999999999 777765
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.4e-40 Score=357.01 Aligned_cols=233 Identities=21% Similarity=0.287 Sum_probs=182.4
Q ss_pred cccCCCcccccccccCCceEEEEEEEeCCC----eEEEEEEeccch-------------------------hccccccCC
Q 002051 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSG----QYFAMKAMDKGV-------------------------MLNRNKTKT 715 (975)
Q Consensus 665 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~----~~vAiK~l~~~~-------------------------~~~~~~~~~ 715 (975)
+|..+.|++.+.||+|+||+||+|.++.++ ..||||+++... ++....+..
T Consensus 3 ei~~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~ 82 (283)
T d1mqba_ 3 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK 82 (283)
T ss_dssp BCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred cCCHHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCC
Confidence 466778999999999999999999987665 479999986431 111122567
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
.+|+|||||.+++|.+++... ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+...
T Consensus 83 ~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~ 161 (283)
T d1mqba_ 83 PMMIITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 161 (283)
T ss_dssp SEEEEEECCTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred ceEEEEEecccCcchhhhhcc-cccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccchhhccc
Confidence 899999999999999988764 3569999999999999999999999999999999999999999999999999997654
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhC-CCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYG-YTPFRGK 874 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G-~~Pf~~~ 874 (975)
..... ........||+.|+|||++.+..++.++|||||||++|||++| .+||.+.
T Consensus 162 ~~~~~------------------------~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~ 217 (283)
T d1mqba_ 162 DDPEA------------------------TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL 217 (283)
T ss_dssp ------------------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred CCCcc------------------------ceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccC
Confidence 22110 1112334689999999999999999999999999999999985 5556666
Q ss_pred CHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 875 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
+..+++..+.. ....+.+..++..+.+||.+||+.||++||| +.||++
T Consensus 218 ~~~~~~~~i~~-~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt----~~eil~ 265 (283)
T d1mqba_ 218 SNHEVMKAIND-GFRLPTPMDCPSAIYQLMMQCWQQERARRPK----FADIVS 265 (283)
T ss_dssp CHHHHHHHHHT-TCCCCCCTTCBHHHHHHHHHHTCSSTTTSCC----HHHHHH
T ss_pred CHHHHHHHHhc-cCCCCCchhhHHHHHHHHHHHCcCCHhHCcC----HHHHHH
Confidence 66666555544 4455666678999999999999999999999 666654
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-40 Score=360.38 Aligned_cols=236 Identities=22% Similarity=0.319 Sum_probs=191.8
Q ss_pred ccccccCCCcccccccccCCceEEEEEEEeCCC-------eEEEEEEeccch--------------------------hc
Q 002051 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSG-------QYFAMKAMDKGV--------------------------ML 708 (975)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~-------~~vAiK~l~~~~--------------------------~~ 708 (975)
+.+.|+.++|++++.||+|+||.||+|++..++ ..||||++++.. +.
T Consensus 6 ~~~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~ 85 (299)
T d1fgka_ 6 PRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLL 85 (299)
T ss_dssp TTTBCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CcCcccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecc
Confidence 446688899999999999999999999987664 479999986542 11
Q ss_pred cccccCCeEEEEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCC
Q 002051 709 NRNKTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 774 (975)
Q Consensus 709 ~~~~~~~~~~lV~Ey~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~N 774 (975)
....++..+|+|||||++|+|.+++.... ...+++..++.++.||+.||+|||++|||||||||+|
T Consensus 86 ~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~N 165 (299)
T d1fgka_ 86 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARN 165 (299)
T ss_dssp EEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred cccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccc
Confidence 11226778999999999999999997542 2458999999999999999999999999999999999
Q ss_pred EEEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHH
Q 002051 775 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 854 (975)
Q Consensus 775 ILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DI 854 (975)
||++.++.+||+|||+++...... .........||+.|+|||++.+..|+.++||
T Consensus 166 iLl~~~~~~kl~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~l~~~~y~~k~Di 220 (299)
T d1fgka_ 166 VLVTEDNVMKIADFGLARDIHHID-------------------------YYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 220 (299)
T ss_dssp EEECTTCCEEECSTTCCCCGGGCC-------------------------TTCCCTTSCCGGGGSCHHHHHHCCCCHHHHH
T ss_pred eeecCCCCeEeccchhhccccccc-------------------------cccccccCCCChhhhhhhHhcCCCCCchhhh
Confidence 999999999999999997653211 1122345678999999999999999999999
Q ss_pred HHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 855 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 855 WSLG~il~ell~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
|||||++|+|++ |.+||.+.+...++..+.. ...++.+..+++.+.+||.+||++||.+||| +.||++
T Consensus 221 wS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~-~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps----~~eil~ 289 (299)
T d1fgka_ 221 WSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE-GHRMDKPSNCTNELYMMMRDCWHAVPSQRPT----FKQLVE 289 (299)
T ss_dssp HHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT-TCCCCCCSSCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred HHhHHHHHHhccCCCCCCCCCCHHHHHHHHHc-CCCCCCCccchHHHHHHHHHHccCCHhHCcC----HHHHHH
Confidence 999999999997 7999998888777666554 4555666678999999999999999999999 777764
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-40 Score=357.46 Aligned_cols=231 Identities=22% Similarity=0.322 Sum_probs=185.7
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCC-C--eEEEEEEeccchhc---------------------------cccccCC
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGS-G--QYFAMKAMDKGVML---------------------------NRNKTKT 715 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t-~--~~vAiK~l~~~~~~---------------------------~~~~~~~ 715 (975)
|..++|++++.||+|+||+||+|++..+ + ..||||++++.... ... ...
T Consensus 5 i~~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~-~~~ 83 (273)
T d1u46a_ 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVV-LTP 83 (273)
T ss_dssp CCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEE-CSS
T ss_pred EchHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-eec
Confidence 4567899999999999999999987543 3 47899988654211 111 345
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccC
Q 002051 716 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 795 (975)
Q Consensus 716 ~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~ 795 (975)
.+|+|||||++|+|.+++... .+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 84 ~~~lv~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~ 162 (273)
T d1u46a_ 84 PMKMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 162 (273)
T ss_dssp SCEEEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred chheeeeeecCcchhhhhhcc-cCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhhhhcc
Confidence 679999999999999988764 3469999999999999999999999999999999999999999999999999997654
Q ss_pred CCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCC
Q 002051 796 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 874 (975)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~ 874 (975)
.... .........|+..|+|||++.+..++.++|||||||++|||++ |.+||.+.
T Consensus 163 ~~~~------------------------~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~ 218 (273)
T d1u46a_ 163 QNDD------------------------HYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL 218 (273)
T ss_dssp C-CC------------------------EEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred cCCC------------------------cceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCc
Confidence 2211 0112234567889999999999999999999999999999997 89999999
Q ss_pred CHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHH
Q 002051 875 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 926 (975)
Q Consensus 875 ~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL 926 (975)
+..+.+..+.+....++....++..+.+||.+||..||++||| +++|+
T Consensus 219 ~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt----~~ei~ 266 (273)
T d1u46a_ 219 NGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT----FVALR 266 (273)
T ss_dssp CHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHH
T ss_pred CHHHHHHHHHhCCCCCCCcccccHHHHHHHHHHcCCChhHCcC----HHHHH
Confidence 9999999999888777777788999999999999999999999 77775
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-39 Score=361.10 Aligned_cols=231 Identities=23% Similarity=0.315 Sum_probs=185.3
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCe----EEEEEEeccchh-------------------------ccccccCCe
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVM-------------------------LNRNKTKTH 716 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~----~vAiK~l~~~~~-------------------------~~~~~~~~~ 716 (975)
+...+|++++.||+|+||+||+|.+..+|+ .||+|.++.... +... ....
T Consensus 6 ~k~~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~-~~~~ 84 (317)
T d1xkka_ 6 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGIC-LTST 84 (317)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSS
T ss_pred CCHHHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-ecCC
Confidence 345689999999999999999999988876 588887754310 0001 3456
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCC
Q 002051 717 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 796 (975)
Q Consensus 717 ~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~ 796 (975)
.+++||||.+|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus 85 ~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~ 163 (317)
T d1xkka_ 85 VQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 163 (317)
T ss_dssp EEEEEECCTTCBHHHHHHHT-SSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTT
T ss_pred eeEEEEeccCCccccccccc-ccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccceeccc
Confidence 78899999999999988764 45799999999999999999999999999999999999999999999999999976542
Q ss_pred CCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHh-CCCCCCCCC
Q 002051 797 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 875 (975)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~-G~~Pf~~~~ 875 (975)
... ........||+.|+|||++.+..|+.++|||||||++|||++ |.+||.+.+
T Consensus 164 ~~~-------------------------~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~ 218 (317)
T d1xkka_ 164 EEK-------------------------EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 218 (317)
T ss_dssp TCC---------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC
T ss_pred ccc-------------------------cccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCC
Confidence 111 011223468999999999999999999999999999999998 899999888
Q ss_pred HHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 876 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 876 ~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
..++...+..+ ..++.+..++..+.+||.+||+.||.+||| +.||+.|
T Consensus 219 ~~~~~~~i~~~-~~~~~p~~~~~~~~~li~~cl~~dP~~RPs----~~eil~~ 266 (317)
T d1xkka_ 219 ASEISSILEKG-ERLPQPPICTIDVYMIMVKCWMIDADSRPK----FRELIIE 266 (317)
T ss_dssp GGGHHHHHHHT-CCCCCCTTBCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HHHHHHHHHcC-CCCCCCcccCHHHHHHHHHhCCCChhhCcC----HHHHHHH
Confidence 77766655554 344555668999999999999999999999 8888877
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=9.8e-40 Score=358.76 Aligned_cols=241 Identities=18% Similarity=0.218 Sum_probs=184.5
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchh-----------------------ccccccCCeEEEEEeccC
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------------LNRNKTKTHVCLITDYCP 725 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~-----------------------~~~~~~~~~~~lV~Ey~~ 725 (975)
++|++++.||+|+||+||+|++..+|+.||||++..... ..........|+|||||
T Consensus 7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~- 85 (299)
T d1ckia_ 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL- 85 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc-
Confidence 579999999999999999999999999999998765421 11112567889999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec---CCcEEEeeccCCCccCCCCCCCC
Q 002051 726 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLSCLTSCKPQLLL 802 (975)
Q Consensus 726 ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~---~g~vkL~DFG~a~~~~~~~~~~~ 802 (975)
+++|.+.+... ...+++..+..++.||+.||+|||++||+||||||+|||++. +..+||+|||+|+.+.......
T Consensus 86 ~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~- 163 (299)
T d1ckia_ 86 GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ- 163 (299)
T ss_dssp CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCC-
T ss_pred CCchhhhhhhc-cCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceecccccccc-
Confidence 67887776653 357999999999999999999999999999999999999864 4579999999997754321110
Q ss_pred CcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002051 803 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 882 (975)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~~~~~~~~ 882 (975)
..........+||+.|||||++.+..++.++|||||||++|+|++|..||...........
T Consensus 164 -------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~ 224 (299)
T d1ckia_ 164 -------------------HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK 224 (299)
T ss_dssp -------------------BCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------
T ss_pred -------------------ceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHH
Confidence 0112234567899999999999999999999999999999999999999987655444332
Q ss_pred HH---hcCCCCC---CCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCcc
Q 002051 883 IL---HKDLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 932 (975)
Q Consensus 883 i~---~~~~~~p---~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~ 932 (975)
+. ......+ ....+|+++.+||.+||+.||++||++. .+.++|+|+|.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~-~i~~~l~~~~~~ 279 (299)
T d1ckia_ 225 YERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYS-YLRQLFRNLFHR 279 (299)
T ss_dssp HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHH-HHHHHHHHHHHH
T ss_pred HHHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHH-HHHHHHHHHHHH
Confidence 22 1111111 1235788999999999999999999932 245667776553
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.8e-39 Score=355.29 Aligned_cols=234 Identities=21% Similarity=0.288 Sum_probs=191.9
Q ss_pred ccccCCCcccccccccCCceEEEEEEEeC-----CCeEEEEEEeccch-------------------------hcccccc
Q 002051 664 EQINLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGV-------------------------MLNRNKT 713 (975)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~-----t~~~vAiK~l~~~~-------------------------~~~~~~~ 713 (975)
.+++.++|++++.||+|+||+||+|+++. +++.||||+++... +......
T Consensus 8 ~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~ 87 (301)
T d1lufa_ 8 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 87 (301)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred ccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeecc
Confidence 45667899999999999999999999864 56899999986532 1111225
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCC
Q 002051 714 KTHVCLITDYCPGGELFLLLDRQP----------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLK 771 (975)
Q Consensus 714 ~~~~~lV~Ey~~ggsL~~~l~~~~----------------------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIK 771 (975)
...+++|||||++|+|.+++.... ...++...+..|+.||+.||+|||++||||||||
T Consensus 88 ~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlK 167 (301)
T d1lufa_ 88 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLA 167 (301)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred CCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEc
Confidence 678899999999999999996421 2348899999999999999999999999999999
Q ss_pred CCCEEEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCCh
Q 002051 772 PENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSA 851 (975)
Q Consensus 772 p~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k 851 (975)
|+|||++.++.+||+|||+|+...... .........||+.|+|||++.+..|+.+
T Consensus 168 p~NILld~~~~~Kl~DFGls~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~t~k 222 (301)
T d1lufa_ 168 TRNCLVGENMVVKIADFGLSRNIYSAD-------------------------YYKADGNDAIPIRWMPPESIFYNRYTTE 222 (301)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGG-------------------------CBC----CCBCGGGCCHHHHHHCCCCHH
T ss_pred ccceEECCCCcEEEccchhheeccCCc-------------------------cccccCCCCcCcCcCCHHHHccCCCChh
Confidence 999999999999999999986543211 1112335678999999999999999999
Q ss_pred hHHHHHHHHHHHHHhCC-CCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 852 VDWWALGILLYEMLYGY-TPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 852 ~DIWSLG~il~ell~G~-~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
+|||||||++|||++|. +||.+.+..+.+..+..+.. .+.+..+++++.+||.+||+.||++||| +.||++
T Consensus 223 sDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~~-~~~p~~~~~~~~~li~~cl~~~P~~RPt----~~ev~~ 294 (301)
T d1lufa_ 223 SDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNI-LACPENCPLELYNLMRLCWSKLPADRPS----FCSIHR 294 (301)
T ss_dssp HHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred hhhccchhhHHHHHccCCCCCCCCCHHHHHHHHHcCCC-CCCCccchHHHHHHHHHHcCCChhHCcC----HHHHHH
Confidence 99999999999999885 78999999888888777653 3444568899999999999999999999 777643
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-39 Score=356.71 Aligned_cols=236 Identities=22% Similarity=0.325 Sum_probs=197.6
Q ss_pred cccccCCCcccccccccCCceEEEEEEEe-----CCCeEEEEEEeccch--------------------------hcccc
Q 002051 663 GEQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGV--------------------------MLNRN 711 (975)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~-----~t~~~vAiK~l~~~~--------------------------~~~~~ 711 (975)
.|.++.++|++.++||+|+||.||+|++. .+++.||||++++.. +....
T Consensus 17 ~~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~ 96 (311)
T d1t46a_ 17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGAC 96 (311)
T ss_dssp GGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence 35577789999999999999999999874 457899999987532 11112
Q ss_pred ccCCeEEEEEeccCCCCHHHHHhhCC----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 002051 712 KTKTHVCLITDYCPGGELFLLLDRQP----------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 775 (975)
Q Consensus 712 ~~~~~~~lV~Ey~~ggsL~~~l~~~~----------------~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NI 775 (975)
.+...+|||||||++|+|.+++.... ...+++..+..++.||+.||+|||++||+||||||+||
T Consensus 97 ~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NI 176 (311)
T d1t46a_ 97 TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNI 176 (311)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred eeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccc
Confidence 25667899999999999999997642 23689999999999999999999999999999999999
Q ss_pred EEecCCcEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHH
Q 002051 776 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 855 (975)
Q Consensus 776 Ll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIW 855 (975)
|++.++.+|++|||+++....... .......+||+.|+|||++.+..++.++|||
T Consensus 177 l~~~~~~~ki~DfG~~~~~~~~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIw 231 (311)
T d1t46a_ 177 LLTHGRITKICDFGLARDIKNDSN-------------------------YVVKGNARLPVKWMAPESIFNCVYTFESDVW 231 (311)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTT-------------------------SEECSSSEECGGGCCHHHHHHCCCCHHHHHH
T ss_pred cccccCcccccccchheeccCCCc-------------------------ceEeeecccChHHcCHHHhcCCCCCCccccc
Confidence 999999999999999976432111 1123346899999999999999999999999
Q ss_pred HHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 856 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 856 SLG~il~ell~-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
||||++|+|++ |.+||.+.+..+.+.+++......+.+..++..+.+||.+||++||.+||| +++|++
T Consensus 232 S~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs----~~~il~ 300 (311)
T d1t46a_ 232 SYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPT----FKQIVQ 300 (311)
T ss_dssp HHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred chHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcC----HHHHHH
Confidence 99999999998 777788877777788888777777777778999999999999999999999 777764
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-39 Score=354.97 Aligned_cols=242 Identities=19% Similarity=0.246 Sum_probs=199.1
Q ss_pred cccccCCCcccccccccCCceEEEEEEEeC-----CCeEEEEEEeccchh-------------------------ccccc
Q 002051 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVM-------------------------LNRNK 712 (975)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~-----t~~~vAiK~l~~~~~-------------------------~~~~~ 712 (975)
.|.|+.++|++.++||+|+||+||+|.+.. +++.||||++++... .....
T Consensus 14 ~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~ 93 (308)
T d1p4oa_ 14 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 93 (308)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred ceeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEe
Confidence 467888999999999999999999999863 357899999875421 11112
Q ss_pred cCCeEEEEEeccCCCCHHHHHhhC--------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEE
Q 002051 713 TKTHVCLITDYCPGGELFLLLDRQ--------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 784 (975)
Q Consensus 713 ~~~~~~lV~Ey~~ggsL~~~l~~~--------~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vk 784 (975)
....+++|||||++|+|.+++... ....++...+..++.||+.||.|||+++|+||||||+|||++.++.+|
T Consensus 94 ~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~K 173 (308)
T d1p4oa_ 94 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 173 (308)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEE
T ss_pred cCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCceEE
Confidence 567789999999999999988642 223578899999999999999999999999999999999999999999
Q ss_pred EeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHH
Q 002051 785 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 864 (975)
Q Consensus 785 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~el 864 (975)
|+|||+|+...... .........||+.|+|||.+.+..++.++|||||||++|||
T Consensus 174 l~DFGla~~~~~~~-------------------------~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El 228 (308)
T d1p4oa_ 174 IGDFGMTRDIYETD-------------------------YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 228 (308)
T ss_dssp ECCTTCCCGGGGGG-------------------------CEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred EeecccceeccCCc-------------------------ceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHH
Confidence 99999996543211 11122345789999999999999999999999999999999
Q ss_pred HhC-CCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHc------CCCccCC
Q 002051 865 LYG-YTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK------HPFFKGV 934 (975)
Q Consensus 865 l~G-~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~------Hp~f~~~ 934 (975)
++| .+||.+.+..+.+..+.++.. .+.+..++..+.+||.+||+.||++||| +.+|++ +|+|+++
T Consensus 229 ~t~~~~p~~~~~~~~~~~~i~~~~~-~~~p~~~~~~l~~li~~cl~~~P~~RPs----~~~il~~L~~~~~~~~~~~ 300 (308)
T d1p4oa_ 229 ATLAEQPYQGLSNEQVLRFVMEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPS----FLEIISSIKEEMEPGFREV 300 (308)
T ss_dssp HHTSCCTTTTSCHHHHHHHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHHHGGGSCTTHHHH
T ss_pred HhCCCCCCCCCCHHHHHHHHHhCCC-CCCcccchHHHHHHHHHHcCCChhHCcC----HHHHHHHHHHhcCCCCcCC
Confidence 997 588999999898888877553 4444568899999999999999999999 667665 7777643
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.2e-39 Score=353.21 Aligned_cols=230 Identities=22% Similarity=0.314 Sum_probs=190.6
Q ss_pred ccCCCcccccccccCCceEEEEEEEeCCCeE--EEEEEeccch--------------------------hccccccCCeE
Q 002051 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQY--FAMKAMDKGV--------------------------MLNRNKTKTHV 717 (975)
Q Consensus 666 i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~--vAiK~l~~~~--------------------------~~~~~~~~~~~ 717 (975)
|+.++|++.++||+|+||+||+|.++.+|.. ||||.++... ++....+.+.+
T Consensus 7 i~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~ 86 (309)
T d1fvra_ 7 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 86 (309)
T ss_dssp CCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred cCHHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCee
Confidence 5678999999999999999999999998874 6777765321 01111256789
Q ss_pred EEEEeccCCCCHHHHHhhC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcE
Q 002051 718 CLITDYCPGGELFLLLDRQ--------------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHV 783 (975)
Q Consensus 718 ~lV~Ey~~ggsL~~~l~~~--------------~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~v 783 (975)
|||||||+||+|.+++... ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+
T Consensus 87 ~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~ 166 (309)
T d1fvra_ 87 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVA 166 (309)
T ss_dssp EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCE
T ss_pred EEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCCce
Confidence 9999999999999999753 23579999999999999999999999999999999999999999999
Q ss_pred EEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHH
Q 002051 784 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE 863 (975)
Q Consensus 784 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~e 863 (975)
||+|||+|+..... .......||+.|+|||.+.+..|+.++|||||||++|+
T Consensus 167 kl~DfG~a~~~~~~----------------------------~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~e 218 (309)
T d1fvra_ 167 KIADFGLSRGQEVY----------------------------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 218 (309)
T ss_dssp EECCTTCEESSCEE----------------------------CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred EEcccccccccccc----------------------------ccccceecCCcccchHHhccCCCCccceeehhHHHHHH
Confidence 99999998653311 11224568999999999999999999999999999999
Q ss_pred HHhC-CCCCCCCCHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 864 MLYG-YTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 864 ll~G-~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
|++| .+||.+.+..+++..+.++ ..++.+..+++++++||.+||+.||++||| ++||++|
T Consensus 219 ll~~~~~p~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~li~~cl~~dP~~RPs----~~eil~~ 279 (309)
T d1fvra_ 219 IVSLGGTPYCGMTCAELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYERPS----FAQILVS 279 (309)
T ss_dssp HHTTSCCTTTTCCHHHHHHHGGGT-CCCCCCTTBCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HHhcCCCCCCCCCHHHHHHHHHhc-CCCCCCccCCHHHHHHHHHHcCCChhHCcC----HHHHHHH
Confidence 9996 5689888888888777664 344555678999999999999999999999 8888876
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=4.4e-38 Score=344.20 Aligned_cols=228 Identities=20% Similarity=0.252 Sum_probs=182.3
Q ss_pred CCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-----------------------hccccccCCeEEEEEecc
Q 002051 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-----------------------MLNRNKTKTHVCLITDYC 724 (975)
Q Consensus 668 ~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-----------------------~~~~~~~~~~~~lV~Ey~ 724 (975)
.++|+++++||+|+||+||+|+++.+|+.||||++.... +........+.|+|||||
T Consensus 4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~ 83 (293)
T d1csna_ 4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL 83 (293)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec
Confidence 578999999999999999999999999999999985432 111122577889999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-----CCcEEEeeccCCCccCCCCC
Q 002051 725 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-----NGHVSLTDFDLSCLTSCKPQ 799 (975)
Q Consensus 725 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~-----~g~vkL~DFG~a~~~~~~~~ 799 (975)
|++|.+++... ...++...+..++.|++.||+|||++||+||||||+|||++. ++.+||+|||+|+.+.....
T Consensus 84 -~~~l~~~~~~~-~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~ 161 (293)
T d1csna_ 84 -GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVT 161 (293)
T ss_dssp -CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTT
T ss_pred -CCCHHHHHHhh-ccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccCcc
Confidence 88999998764 356999999999999999999999999999999999999974 56899999999977543211
Q ss_pred CCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCCCC---H
Q 002051 800 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT---R 876 (975)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~~~---~ 876 (975)
.. ..........+||+.|||||++.+..++.++|||||||++|+|++|..||.+.. .
T Consensus 162 ~~--------------------~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~ 221 (293)
T d1csna_ 162 KQ--------------------HIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN 221 (293)
T ss_dssp CC--------------------BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH
T ss_pred cc--------------------ceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhH
Confidence 10 111223446789999999999999999999999999999999999999997643 3
Q ss_pred HHHHHHHHhcCCCCC---CCCCCcHHHHHHHHHhcccCccccCC
Q 002051 877 QKTFANILHKDLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLG 917 (975)
Q Consensus 877 ~~~~~~i~~~~~~~p---~~~~~s~~~~~li~~~L~~dP~~R~t 917 (975)
...+..+.......+ ....+++++.+|+..|+..+|++||+
T Consensus 222 ~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~ 265 (293)
T d1csna_ 222 KQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPD 265 (293)
T ss_dssp HHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCC
T ss_pred HHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcC
Confidence 333444433221111 12346789999999999999999998
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.2e-37 Score=351.34 Aligned_cols=243 Identities=23% Similarity=0.393 Sum_probs=183.0
Q ss_pred cccccCCCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc----------------------------------
Q 002051 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML---------------------------------- 708 (975)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~---------------------------------- 708 (975)
++.+..++|+++++||+|+||+||+|+++.+|+.||||++++....
T Consensus 7 g~~~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~ 86 (362)
T d1q8ya_ 7 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLL 86 (362)
T ss_dssp TCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCC
T ss_pred CCCccCCcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEE
Confidence 5556667899999999999999999999999999999998764210
Q ss_pred cc--cccCCeEEEEEeccCCCC-HHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCC---
Q 002051 709 NR--NKTKTHVCLITDYCPGGE-LFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNG--- 781 (975)
Q Consensus 709 ~~--~~~~~~~~lV~Ey~~ggs-L~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~-~gIiHrDIKp~NILl~~~g--- 781 (975)
.. .......+++|+++..+. ............+++..++.++.||+.||.|||+ +||+||||||+|||++.++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~ 166 (362)
T d1q8ya_ 87 DHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPE 166 (362)
T ss_dssp EEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTT
T ss_pred EEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCccc
Confidence 00 013345566777665543 4444445556789999999999999999999998 8999999999999998665
Q ss_pred ---cEEEeeccCCCccCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHH
Q 002051 782 ---HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALG 858 (975)
Q Consensus 782 ---~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG 858 (975)
.++++|||.|.... ......+||+.|+|||++.+..|+.++||||+|
T Consensus 167 ~~~~~kl~dfg~s~~~~------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 216 (362)
T d1q8ya_ 167 NLIQIKIADLGNACWYD------------------------------EHYTNSIQTREYRSPEVLLGAPWGCGADIWSTA 216 (362)
T ss_dssp TEEEEEECCCTTCEETT------------------------------BCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHH
T ss_pred ccceeeEeecccccccc------------------------------cccccccccccccChhhccccCCCccccccchH
Confidence 39999999985432 122346799999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCHH------HHHHHHHh--c------------------------CC--------------CCCC
Q 002051 859 ILLYEMLYGYTPFRGKTRQ------KTFANILH--K------------------------DL--------------KFPS 892 (975)
Q Consensus 859 ~il~ell~G~~Pf~~~~~~------~~~~~i~~--~------------------------~~--------------~~p~ 892 (975)
|++++|++|+.||...... ..+..... + .. ....
T Consensus 217 ~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (362)
T d1q8ya_ 217 CLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKF 296 (362)
T ss_dssp HHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCC
T ss_pred HHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhccccccc
Confidence 9999999999999754321 11111110 0 00 0001
Q ss_pred CCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcCCCccCCCcchh
Q 002051 893 STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 939 (975)
Q Consensus 893 ~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~Hp~f~~~~~~~~ 939 (975)
....+..+++||.+||.+||.+||| ++|+|+||||+++.....
T Consensus 297 ~~~~~~~~~dll~~mL~~dP~~Rpt----a~e~L~Hp~f~~~~~~~~ 339 (362)
T d1q8ya_ 297 SKDEAKEISDFLSPMLQLDPRKRAD----AGGLVNHPWLKDTLGMEE 339 (362)
T ss_dssp CHHHHHHHHHHHGGGGCSSTTTCBC----HHHHHTCGGGTTCTTCTT
T ss_pred CcccCHHHHHHHHHHCCCChhHCcC----HHHHhcCcccCCCCCccc
Confidence 1124567999999999999999999 999999999997765433
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-37 Score=338.29 Aligned_cols=227 Identities=17% Similarity=0.215 Sum_probs=177.5
Q ss_pred cccccccCCceEEEEEEEeCCC---eEEEEEEeccch-------------------------hcccc-ccCCeEEEEEec
Q 002051 673 PIKPLGSGDTGSVHLVELCGSG---QYFAMKAMDKGV-------------------------MLNRN-KTKTHVCLITDY 723 (975)
Q Consensus 673 i~~~LG~G~fG~Vy~a~~~~t~---~~vAiK~l~~~~-------------------------~~~~~-~~~~~~~lV~Ey 723 (975)
+.++||+|+||+||+|.+..++ ..||||.+++.. ++... ..+..+|+||||
T Consensus 31 ~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~ 110 (311)
T d1r0pa_ 31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 110 (311)
T ss_dssp EEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEEC
T ss_pred cceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEE
Confidence 3578999999999999986653 369999986421 11111 145689999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCCccCCCCCCCCC
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 803 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 803 (975)
|++|+|.+++... ...++...+..++.||+.||.|||+.+|+||||||+|||++.++.+||+|||+++........
T Consensus 111 ~~~g~l~~~~~~~-~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~--- 186 (311)
T d1r0pa_ 111 MKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD--- 186 (311)
T ss_dssp CTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCC---
T ss_pred eecCchhhhhccc-cccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhccccccc---
Confidence 9999999998754 456788889999999999999999999999999999999999999999999999765432111
Q ss_pred cchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCCCCChhHHHHHHHHHHHHHhCCCCCCC-CCHHHHHHH
Q 002051 804 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG-KTRQKTFAN 882 (975)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~k~DIWSLG~il~ell~G~~Pf~~-~~~~~~~~~ 882 (975)
.........||+.|+|||.+....++.++|||||||++|||++|..||.. .+..+....
T Consensus 187 --------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~ 246 (311)
T d1r0pa_ 187 --------------------SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 246 (311)
T ss_dssp --------------------CTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHH
T ss_pred --------------------cceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHH
Confidence 01122345789999999999999999999999999999999997776654 334444555
Q ss_pred HHhcCCCCCCCCCCcHHHHHHHHHhcccCccccCCChhhHHHHHcC
Q 002051 883 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 928 (975)
Q Consensus 883 i~~~~~~~p~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~H 928 (975)
+..+ ..++.+..++..+.+||.+||+.||++||| +.||++|
T Consensus 247 i~~g-~~~~~p~~~~~~l~~li~~cl~~dP~~RPs----~~ei~~~ 287 (311)
T d1r0pa_ 247 LLQG-RRLLQPEYCPDPLYEVMLKCWHPKAEMRPS----FSELVSR 287 (311)
T ss_dssp HHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HHcC-CCCCCcccCcHHHHHHHHHHcCCCHhHCcC----HHHHHHH
Confidence 5554 344445568899999999999999999999 8888776
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-36 Score=333.19 Aligned_cols=227 Identities=23% Similarity=0.294 Sum_probs=170.7
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc--------------c---------cc----ccCCeEEEEE
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--------------N---------RN----KTKTHVCLIT 721 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~--------------~---------~~----~~~~~~~lV~ 721 (975)
.+|.+.+.||+|+||+||+|++ +|+.||||+++..... . .. .....+||||
T Consensus 3 ~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~ 80 (303)
T d1vjya_ 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEE
Confidence 4688999999999999999986 6899999998654210 0 00 0223689999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH--------CCCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 722 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC--------QGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 722 Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~--------~gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
|||++|+|.+++.+ ..++......++.|++.||.|||+ +||+||||||+|||++.++.+||+|||+++.
T Consensus 81 Ey~~~g~L~~~l~~---~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~ 157 (303)
T d1vjya_ 81 DYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp ECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred ecccCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCcccc
Confidence 99999999999987 358999999999999999999996 5999999999999999999999999999976
Q ss_pred cCCCCCCCCCcchhhhhccCCCCCcccccccccccccccCCCCccchhhhcCCC------CCChhHHHHHHHHHHHHHhC
Q 002051 794 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG------HTSAVDWWALGILLYEMLYG 867 (975)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~------~~~k~DIWSLG~il~ell~G 867 (975)
....... ........+||+.|+|||++.+.. ++.++|||||||+||||++|
T Consensus 158 ~~~~~~~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg 214 (303)
T d1vjya_ 158 HDSATDT-----------------------IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 214 (303)
T ss_dssp EETTTTE-----------------------ECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCcc-----------------------eeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhC
Confidence 5322110 011223568999999999997653 45689999999999999999
Q ss_pred CCCCCC---------------CCHHHHHHHHHhcCCCCCCC-----CCCcHHHHHHHHHhcccCccccCCChhhHHHHHc
Q 002051 868 YTPFRG---------------KTRQKTFANILHKDLKFPSS-----TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 927 (975)
Q Consensus 868 ~~Pf~~---------------~~~~~~~~~i~~~~~~~p~~-----~~~s~~~~~li~~~L~~dP~~R~t~~~~~~elL~ 927 (975)
.+||.. .........+.......+.+ ......+.+||.+||+.||.+||| +.||++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps----~~ei~~ 290 (303)
T d1vjya_ 215 CSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT----ALRIKK 290 (303)
T ss_dssp BCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCC----HHHHHH
T ss_pred CCCCCcccccccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcC----HHHHHH
Confidence 887632 12223333333333322211 112245889999999999999999 777654
|
| >d1n9la_ d.110.3.6 (A:) Putative blue light receptor, phot-lov1 domain {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: Flavin-binding PAS domain domain: Putative blue light receptor, phot-lov1 domain species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.81 E-value=1.2e-19 Score=166.17 Aligned_cols=108 Identities=60% Similarity=1.139 Sum_probs=102.6
Q ss_pred ccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCCEE
Q 002051 198 FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPF 277 (975)
Q Consensus 198 ~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~ 277 (975)
+.++++++|+..+||+|+|||++|++++||+++|++|+++..+.+++......+.+++.+..++.+.+++..++|||+.+
T Consensus 2 i~~~~vi~Da~~pdg~Ii~vN~a~~~~~Gy~~~El~G~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~e~~~~~kdG~~~ 81 (109)
T d1n9la_ 2 LRHTFVVADATLPDCPLVYASEGFYAMTGYGPDEVLGHNCRFLQGEGTDPKEVQKIRDAIKKGEACSVRLLNYRKDGTPF 81 (109)
T ss_dssp CSCEEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEEEEECTTSCEE
T ss_pred ccceEEEEeCCCCCCeEEEEcHHHHHHHCcCHHHHcCCcceeeecccCCHHHhhhhhhHhhcCCceeeeEEEEecCCeEE
Confidence 56899999987779999999999999999999999999999899888888899999999999999999999999999999
Q ss_pred EEEEEeeeeecCCCCEEEEEEEEeccch
Q 002051 278 WNLLTIAPIKDDEGKVLKFIGMQVEVSK 305 (975)
Q Consensus 278 w~~~~i~pi~d~~G~v~~~v~~~rDITe 305 (975)
|+++++.|++|++|++.+++++++|||.
T Consensus 82 w~~~~~~pi~d~~G~v~~~v~~~~DITa 109 (109)
T d1n9la_ 82 WNLLTVTPIKTPDGRVSKFVGVQVDVTS 109 (109)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEECCC
T ss_pred EEEEEEEEEECCCCCEEEEEEEEEECCC
Confidence 9999999999999999999999999993
|
| >d1n9la_ d.110.3.6 (A:) Putative blue light receptor, phot-lov1 domain {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: Flavin-binding PAS domain domain: Putative blue light receptor, phot-lov1 domain species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.80 E-value=3.2e-19 Score=163.38 Aligned_cols=108 Identities=45% Similarity=0.912 Sum_probs=101.0
Q ss_pred ccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEccCCcEE
Q 002051 481 IEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKF 560 (975)
Q Consensus 481 ~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~~kdG~~~ 560 (975)
+.++++++|+...||+|+|||++|++++||+++|++|+++..+.+++......+.+.+.+..+..+.+|+++++|||+.+
T Consensus 2 i~~~~vi~Da~~pdg~Ii~vN~a~~~~~Gy~~~El~G~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~e~~~~~kdG~~~ 81 (109)
T d1n9la_ 2 LRHTFVVADATLPDCPLVYASEGFYAMTGYGPDEVLGHNCRFLQGEGTDPKEVQKIRDAIKKGEACSVRLLNYRKDGTPF 81 (109)
T ss_dssp CSCEEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEEEEECTTSCEE
T ss_pred ccceEEEEeCCCCCCeEEEEcHHHHHHHCcCHHHHcCCcceeeecccCCHHHhhhhhhHhhcCCceeeeEEEEecCCeEE
Confidence 46899999975446669999999999999999999999999899998888888999999999999999999999999999
Q ss_pred EEEEEEeeeecCCCCEEEEEEEeecCCc
Q 002051 561 WNLFHLQPMRDQKGEVQYFIGVQLDGSE 588 (975)
Q Consensus 561 wv~~~~~pi~d~~G~i~~~v~i~rDITe 588 (975)
|++++++|++|++|++.+++++++|||.
T Consensus 82 w~~~~~~pi~d~~G~v~~~v~~~~DITa 109 (109)
T d1n9la_ 82 WNLLTVTPIKTPDGRVSKFVGVQVDVTS 109 (109)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEECCC
T ss_pred EEEEEEEEEECCCCCEEEEEEEEEECCC
Confidence 9999999999999999999999999994
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.79 E-value=2e-20 Score=189.85 Aligned_cols=113 Identities=16% Similarity=0.126 Sum_probs=86.0
Q ss_pred cccccccccCCceEEEEEEEeCCCeEEEEEEeccchhc------------------------------ccccc---C---
Q 002051 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML------------------------------NRNKT---K--- 714 (975)
Q Consensus 671 y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~~~------------------------------~~~~~---~--- 714 (975)
|.+.++||+|+||+||+|.+ .+|+.||||+++..... ..... .
T Consensus 2 ~~vg~~IG~G~~g~Vy~a~~-~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~ 80 (191)
T d1zara2 2 DAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVY 80 (191)
T ss_dssp SEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEE
T ss_pred chhCCEeeeCcceEEEEEEC-CCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEE
Confidence 45788999999999999998 47899999987542110 00000 0
Q ss_pred --CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEeeccCCC
Q 002051 715 --THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 792 (975)
Q Consensus 715 --~~~~lV~Ey~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH~~gIiHrDIKp~NILl~~~g~vkL~DFG~a~ 792 (975)
...++||||+++..+.. ++...+..++.||+.+|.|||++||+||||||+|||++.+ .++|+|||.|.
T Consensus 81 ~~~~~~lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~-~~~liDFG~a~ 150 (191)
T d1zara2 81 AWEGNAVLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEE-GIWIIDFPQSV 150 (191)
T ss_dssp EEETTEEEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETT-EEEECCCTTCE
T ss_pred EecCCEEEEEeeccccccc---------hhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCC-CEEEEECCCcc
Confidence 11269999997755432 4445577899999999999999999999999999999965 58999999985
Q ss_pred cc
Q 002051 793 LT 794 (975)
Q Consensus 793 ~~ 794 (975)
..
T Consensus 151 ~~ 152 (191)
T d1zara2 151 EV 152 (191)
T ss_dssp ET
T ss_pred cC
Confidence 53
|
| >d1bywa_ d.110.3.6 (A:) Erg potassium channel, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: Flavin-binding PAS domain domain: Erg potassium channel, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.74 E-value=8.5e-18 Score=153.86 Aligned_cols=107 Identities=30% Similarity=0.527 Sum_probs=98.4
Q ss_pred CcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCC--cCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEccCCcEE
Q 002051 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRF--LQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKF 560 (975)
Q Consensus 483 d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~--l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~~kdG~~~ 560 (975)
..++++|+.+.|++|+|||++|++++||+.+|++|+++.. +.+++........+...+..+..+..++++++++|+.+
T Consensus 2 ~~f~i~~~~~~d~~I~~~N~a~~~l~G~~~~eiiG~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~e~~~~~~~g~~~ 81 (110)
T d1bywa_ 2 RKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPCTQRRAAAQIAQALLGAEERKVEIAFYRKDGSCF 81 (110)
T ss_dssp CEEEEEETTSSSCBEEEECHHHHHHHTCCHHHHTTSBTTCGGGCCTTCCHHHHHHHHHHHHTTCCEEEEEEEECTTSCEE
T ss_pred ceEEEEcCCCCCCEEEEEcHHHHHHhCCCHHHhcccCcccccceeeheecccccccchhhcccccccceeeeeeccccee
Confidence 3578889887888899999999999999999999998654 44677788889999999999999999999999999999
Q ss_pred EEEEEEeeeecCCCCEEEEEEEeecCCcc
Q 002051 561 WNLFHLQPMRDQKGEVQYFIGVQLDGSEH 589 (975)
Q Consensus 561 wv~~~~~pi~d~~G~i~~~v~i~rDITer 589 (975)
|++++++|++|++|++++++++++|||||
T Consensus 82 w~~~~~~pi~d~~G~v~~~i~~~~DITer 110 (110)
T d1bywa_ 82 LCLVDVVPVKNEDGAVIMFILNFEVVMEK 110 (110)
T ss_dssp EEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred eeeeeEEEEECCCCCEEEEEEEEEECCCC
Confidence 99999999999999999999999999997
|
| >d1bywa_ d.110.3.6 (A:) Erg potassium channel, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: Flavin-binding PAS domain domain: Erg potassium channel, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=2.8e-17 Score=150.39 Aligned_cols=106 Identities=28% Similarity=0.555 Sum_probs=97.5
Q ss_pred cEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCC--CCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCCEEE
Q 002051 201 TFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRF--LQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFW 278 (975)
Q Consensus 201 ~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~--l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~w 278 (975)
.++|+|+..+|+.|+|+|++|++|+||+.+|++|+++.. +.+++........++.++..++.+..+++.++++|+.+|
T Consensus 3 ~f~i~~~~~~d~~I~~~N~a~~~l~G~~~~eiiG~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~e~~~~~~~g~~~w 82 (110)
T d1bywa_ 3 KFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPCTQRRAAAQIAQALLGAEERKVEIAFYRKDGSCFL 82 (110)
T ss_dssp EEEEEETTSSSCBEEEECHHHHHHHTCCHHHHTTSBTTCGGGCCTTCCHHHHHHHHHHHHTTCCEEEEEEEECTTSCEEE
T ss_pred eEEEEcCCCCCCEEEEEcHHHHHHhCCCHHHhcccCcccccceeeheecccccccchhhcccccccceeeeeecccceee
Confidence 578899766788999999999999999999999999764 456777888899999999999999999999999999999
Q ss_pred EEEEeeeeecCCCCEEEEEEEEeccchh
Q 002051 279 NLLTIAPIKDDEGKVLKFIGMQVEVSKH 306 (975)
Q Consensus 279 ~~~~i~pi~d~~G~v~~~v~~~rDITer 306 (975)
++++++|++|++|++++++++++|||||
T Consensus 83 ~~~~~~pi~d~~G~v~~~i~~~~DITer 110 (110)
T d1bywa_ 83 CLVDVVPVKNEDGAVIMFILNFEVVMEK 110 (110)
T ss_dssp EEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred eeeeEEEEECCCCCEEEEEEEEEECCCC
Confidence 9999999999999999999999999986
|
| >d1jnua_ d.110.3.6 (A:) Photoreceptor phy3 flavin-binding domain, lov2 {Maidenhair fern (Adiantum capillus-veneris) [TaxId: 13818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: Flavin-binding PAS domain domain: Photoreceptor phy3 flavin-binding domain, lov2 species: Maidenhair fern (Adiantum capillus-veneris) [TaxId: 13818]
Probab=99.72 E-value=2.5e-17 Score=148.97 Aligned_cols=103 Identities=72% Similarity=1.188 Sum_probs=97.8
Q ss_pred cEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEccCCcEEEEE
Q 002051 484 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNL 563 (975)
Q Consensus 484 ~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~~kdG~~~wv~ 563 (975)
.++++|+...|++|+|||++|++++||+.+|++|+++..+.+++......+.+...+..+..+.+|++++++||+.+|++
T Consensus 2 ~fvi~d~~~pd~~I~y~N~a~~~~~G~s~~e~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dg~~~~~~ 81 (104)
T d1jnua_ 2 SFVITDPRLPDNPIIFASDRFLELTEYTREEVLGNNCRFLQGRGTDRKAVQLIRDAVKEQRDVTVQVLNYTKGGRAFWNL 81 (104)
T ss_dssp EEEEECTTSTTCCEEEECHHHHHHHTCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHHTCCEEEEEEEECTTSCEEEEE
T ss_pred eEEEEcCCCCCCEEEEEcHHHHHHHCcCHHHHCCccceeccccccchHHHhhhhhhhhcCceeEeEEEEEecccceEEEE
Confidence 57899976567779999999999999999999999999899999999999999999999999999999999999999999
Q ss_pred EEEeeeecCCCCEEEEEEEeecC
Q 002051 564 FHLQPMRDQKGEVQYFIGVQLDG 586 (975)
Q Consensus 564 ~~~~pi~d~~G~i~~~v~i~rDI 586 (975)
++++|++|++|++++++++++||
T Consensus 82 ~~~~pi~d~~G~v~~~i~i~~DI 104 (104)
T d1jnua_ 82 FHLQVMRDENGDVQYFIGVQQEM 104 (104)
T ss_dssp EEEEEECTTTSSCCEEEEEEEEC
T ss_pred EEEEEEECCCCCEEEEEEEEEcC
Confidence 99999999999999999999998
|
| >d1jnua_ d.110.3.6 (A:) Photoreceptor phy3 flavin-binding domain, lov2 {Maidenhair fern (Adiantum capillus-veneris) [TaxId: 13818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: Flavin-binding PAS domain domain: Photoreceptor phy3 flavin-binding domain, lov2 species: Maidenhair fern (Adiantum capillus-veneris) [TaxId: 13818]
Probab=99.72 E-value=2.1e-17 Score=149.49 Aligned_cols=103 Identities=45% Similarity=0.866 Sum_probs=98.8
Q ss_pred cEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCCEEEEE
Q 002051 201 TFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNL 280 (975)
Q Consensus 201 ~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~w~~ 280 (975)
.++++|+..+||+|+|+|+||++++||+.+|++|+++..+.++.......+.+...+..++.+.++++.+++||+.+|++
T Consensus 2 ~fvi~d~~~pd~~I~y~N~a~~~~~G~s~~e~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dg~~~~~~ 81 (104)
T d1jnua_ 2 SFVITDPRLPDNPIIFASDRFLELTEYTREEVLGNNCRFLQGRGTDRKAVQLIRDAVKEQRDVTVQVLNYTKGGRAFWNL 81 (104)
T ss_dssp EEEEECTTSTTCCEEEECHHHHHHHTCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHHTCCEEEEEEEECTTSCEEEEE
T ss_pred eEEEEcCCCCCCEEEEEcHHHHHHHCcCHHHHCCccceeccccccchHHHhhhhhhhhcCceeEeEEEEEecccceEEEE
Confidence 47899987779999999999999999999999999999899999999999999999999999999999999999999999
Q ss_pred EEeeeeecCCCCEEEEEEEEecc
Q 002051 281 LTIAPIKDDEGKVLKFIGMQVEV 303 (975)
Q Consensus 281 ~~i~pi~d~~G~v~~~v~~~rDI 303 (975)
+++.|++|++|++++++++++||
T Consensus 82 ~~~~pi~d~~G~v~~~i~i~~DI 104 (104)
T d1jnua_ 82 FHLQVMRDENGDVQYFIGVQQEM 104 (104)
T ss_dssp EEEEEECTTTSSCCEEEEEEEEC
T ss_pred EEEEEEECCCCCEEEEEEEEEcC
Confidence 99999999999999999999998
|
| >d1ew0a_ d.110.3.2 (A:) Histidine kinase FixL heme domain {Rhizobium meliloti [TaxId: 382]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: Heme-binding PAS domain domain: Histidine kinase FixL heme domain species: Rhizobium meliloti [TaxId: 382]
Probab=99.67 E-value=2.3e-17 Score=155.37 Aligned_cols=125 Identities=22% Similarity=0.267 Sum_probs=108.9
Q ss_pred cccccccccCcchHHHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHH
Q 002051 175 SDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIR 254 (975)
Q Consensus 175 ~~~~~~e~~L~~~~~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~ 254 (975)
|+.++.+++|+++++.|++++++++++|+++|. +|+|+++|++|++|+||+++|++|+++..++++.........+.
T Consensus 2 s~l~~~e~~l~~~e~~~~~i~~~~~~~i~~~d~---~g~i~~~N~~~~~l~Gy~~~el~g~~~~~~~~~~~~~~~~~~~~ 78 (130)
T d1ew0a_ 2 SHMLETEDVVRARDAHLRSILDTVPDATVVSAT---DGTIVSFNAAAVRQFGYAEEEVIGQNLRILMPEPYRHEHDGYLQ 78 (130)
T ss_dssp CHHHHHHHHHHHHTSCHHHHHTTCSSEEEEEET---TSBEEEECHHHHHHHCCCHHHHTTSBGGGGSCTTTGGGHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHcCCCeEEEEeC---CccEEEEHHHHHHhhcCCHHHhcCCccccccccchhHHHHHHHH
Confidence 345678899999999999999999999999999 99999999999999999999999999988888888777777777
Q ss_pred HHHHcCCc----EEEEEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEeccc
Q 002051 255 ETLQNGQS----YCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (975)
Q Consensus 255 ~~l~~g~~----~~~e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDIT 304 (975)
..+..+.. ...++..+++||+.+|++++++|+.+.++ .+++++++|||
T Consensus 79 ~~~~~~~~~~~~~~~e~~~~~~dG~~~~v~~~~~~i~~~~~--~~~~~i~rDIT 130 (130)
T d1ew0a_ 79 RYMATGEKRIIGIDRVVSGQRKDGSTFPMKLAVGEMRSGGE--RFFTGFIRDLT 130 (130)
T ss_dssp HHHHHCCCSSTTSCEEEEEECTTSCEEEEEEEEEEEEETTE--EEEEEEEEECC
T ss_pred HHHHhCCCccccceeeEEEEcCCCCEEEEEEEEEEEEECCe--EEEEEEEEECC
Confidence 77765543 45678888999999999999999987544 35889999998
|
| >d1ew0a_ d.110.3.2 (A:) Histidine kinase FixL heme domain {Rhizobium meliloti [TaxId: 382]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: Heme-binding PAS domain domain: Histidine kinase FixL heme domain species: Rhizobium meliloti [TaxId: 382]
Probab=99.67 E-value=1.3e-16 Score=150.25 Aligned_cols=124 Identities=16% Similarity=0.204 Sum_probs=105.7
Q ss_pred hhhHHHHHHHhhc-CcHHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHH
Q 002051 459 VDDKVRQKEMRKG-IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIR 537 (975)
Q Consensus 459 ~er~~~~~~l~~~-~~l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~ 537 (975)
++.++.+++|+++ ++|+.++++++++|+++|.+|+ |++||+++++++||+++|++|+++..++++.........+.
T Consensus 2 s~l~~~e~~l~~~e~~~~~i~~~~~~~i~~~d~~g~---i~~~N~~~~~l~Gy~~~el~g~~~~~~~~~~~~~~~~~~~~ 78 (130)
T d1ew0a_ 2 SHMLETEDVVRARDAHLRSILDTVPDATVVSATDGT---IVSFNAAAVRQFGYAEEEVIGQNLRILMPEPYRHEHDGYLQ 78 (130)
T ss_dssp CHHHHHHHHHHHHTSCHHHHHTTCSSEEEEEETTSB---EEEECHHHHHHHCCCHHHHTTSBGGGGSCTTTGGGHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHcCCCeEEEEeCCcc---EEEEHHHHHHhhcCCHHHhcCCccccccccchhHHHHHHHH
Confidence 4566777777776 7899999999999999999766 99999999999999999999999988888888777766777
Q ss_pred HHHHcCCc----EEEEEEEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeecCC
Q 002051 538 AAIDNQTD----VTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (975)
Q Consensus 538 ~~l~~g~~----~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDIT 587 (975)
..+..+.. ...++...++||+.+|++++++|+.++++ ..++++++|||
T Consensus 79 ~~~~~~~~~~~~~~~e~~~~~~dG~~~~v~~~~~~i~~~~~--~~~~~i~rDIT 130 (130)
T d1ew0a_ 79 RYMATGEKRIIGIDRVVSGQRKDGSTFPMKLAVGEMRSGGE--RFFTGFIRDLT 130 (130)
T ss_dssp HHHHHCCCSSTTSCEEEEEECTTSCEEEEEEEEEEEEETTE--EEEEEEEEECC
T ss_pred HHHHhCCCccccceeeEEEEcCCCCEEEEEEEEEEEEECCe--EEEEEEEEECC
Confidence 66665543 56788999999999999999999987544 45889999998
|
| >d1p97a_ d.110.3.7 (A:) Hypoxia-inducible factor Hif2a, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: Hypoxia-inducible factor Hif2a, C-terminal domain domain: Hypoxia-inducible factor Hif2a, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.60 E-value=7.5e-16 Score=141.51 Aligned_cols=106 Identities=17% Similarity=0.132 Sum_probs=95.4
Q ss_pred CcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEccCCcEEEE
Q 002051 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWN 562 (975)
Q Consensus 483 d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~~kdG~~~wv 562 (975)
+.|+..|.+|+ |+|||+++++++||+++|++|+++..+++|++.....+.+...+..+..+..+++++++||+.+|+
T Consensus 7 ~fi~r~~~dG~---i~~~N~~~~~~~G~~~~el~g~~~~~~~~~ed~~~~~~~~~~~~~~~~~~~~e~~~~~kdG~~~wv 83 (114)
T d1p97a_ 7 TFLSRHSMDMK---FTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWL 83 (114)
T ss_dssp EEEEEECTTTS---CSEECTTHHHHTSSCHHHHTTSCHHHHSCSSSHHHHHHHHHHHTTTSEEEEEEEEEECTTSCEEEE
T ss_pred EEEEEECCCCc---EEEECHHHHHHcCCCccccccccccccccccccccceeeeeecccccceeecceeeeeecCcceEE
Confidence 34444688666 999999999999999999999998888999988888888888887777889999999999999999
Q ss_pred EEEEeeeecC-CCCEEEEEEEeecCCcccc
Q 002051 563 LFHLQPMRDQ-KGEVQYFIGVQLDGSEHLE 591 (975)
Q Consensus 563 ~~~~~pi~d~-~G~i~~~v~i~rDITerk~ 591 (975)
+++.+|++|. +|++.+++++.+||||+|+
T Consensus 84 ~~~~~~~~~~~~~~~~~ii~~~~dite~k~ 113 (114)
T d1p97a_ 84 ETQGTVIYNPRNLQPQCIMCVNYVLSEIEK 113 (114)
T ss_dssp EEEEEEEECTTTCSEEEEEEEEEEEEEEEC
T ss_pred EEEEEEEEeCCCCCEEEEEEEEEECChhhc
Confidence 9999999996 6899999999999999986
|
| >d1p97a_ d.110.3.7 (A:) Hypoxia-inducible factor Hif2a, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: Hypoxia-inducible factor Hif2a, C-terminal domain domain: Hypoxia-inducible factor Hif2a, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=1.8e-15 Score=138.93 Aligned_cols=105 Identities=15% Similarity=0.165 Sum_probs=93.8
Q ss_pred cEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCCEEEEE
Q 002051 201 TFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNL 280 (975)
Q Consensus 201 ~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~w~~ 280 (975)
.|...|. +|+|+|+|++++.++||+.+|++|+++..++++++.....+.+...+..+..+..+++.+++||+.+|++
T Consensus 8 fi~r~~~---dG~i~~~N~~~~~~~G~~~~el~g~~~~~~~~~ed~~~~~~~~~~~~~~~~~~~~e~~~~~kdG~~~wv~ 84 (114)
T d1p97a_ 8 FLSRHSM---DMKFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLE 84 (114)
T ss_dssp EEEEECT---TTSCSEECTTHHHHTSSCHHHHTTSCHHHHSCSSSHHHHHHHHHHHTTTSEEEEEEEEEECTTSCEEEEE
T ss_pred EEEEECC---CCcEEEECHHHHHHcCCCccccccccccccccccccccceeeeeecccccceeecceeeeeecCcceEEE
Confidence 3444577 9999999999999999999999999988888888877777777777777777888999999999999999
Q ss_pred EEeeeeecC-CCCEEEEEEEEeccchhhH
Q 002051 281 LTIAPIKDD-EGKVLKFIGMQVEVSKHTE 308 (975)
Q Consensus 281 ~~i~pi~d~-~G~v~~~v~~~rDITerk~ 308 (975)
++.+|++|+ +|++.+++++.+||||+|+
T Consensus 85 ~~~~~~~~~~~~~~~~ii~~~~dite~k~ 113 (114)
T d1p97a_ 85 TQGTVIYNPRNLQPQCIMCVNYVLSEIEK 113 (114)
T ss_dssp EEEEEEECTTTCSEEEEEEEEEEEEEEEC
T ss_pred EEEEEEEeCCCCCEEEEEEEEEECChhhc
Confidence 999999997 6899999999999999985
|
| >d1v9ya_ d.110.3.2 (A:) Direct oxygen sensor protein, DOS {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: Heme-binding PAS domain domain: Direct oxygen sensor protein, DOS species: Escherichia coli [TaxId: 562]
Probab=99.52 E-value=1.7e-14 Score=131.32 Aligned_cols=108 Identities=21% Similarity=0.348 Sum_probs=87.2
Q ss_pred HHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCC----cEEE
Q 002051 190 IVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ----SYCG 265 (975)
Q Consensus 190 ~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~----~~~~ 265 (975)
.|.+++++++++|+++|. +|+|+++|++|++++||+++|++|+++..+.+..........+...+..+. ....
T Consensus 2 ~~~~~~e~~~d~i~~~d~---~g~i~~~N~~~~~l~Gy~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (113)
T d1v9ya_ 2 IFFPALEQNMMGAVLINE---NDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSR 78 (113)
T ss_dssp CHHHHHHTCSSEEEEECT---TSBEEEECHHHHHHHSCCGGGTTTSBGGGGSCGGGTTTHHHHHHHHHC----------C
T ss_pred HHHHHHHcCcCcEEEEeC---CCCEEEEchhHhhhhccchhhhcCcceecccccccccccccccccccccccccccccce
Confidence 478999999999999999 999999999999999999999999998877776666655555555554333 2455
Q ss_pred EEEEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEec
Q 002051 266 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVE 302 (975)
Q Consensus 266 e~~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rD 302 (975)
+...++|||+.+|++++++|+.+++|. ++++++||
T Consensus 79 e~~~~~~dG~~~~v~~~~~~i~~~~~~--~~~~v~rD 113 (113)
T d1v9ya_ 79 ELQLEKKDGSKIWTRFALSKVSAEGKV--YYLALVRD 113 (113)
T ss_dssp EEEEECTTSCEEEEEEEEEEEEETTEE--EEEEEEEC
T ss_pred eeeeccccceeEEEEEEEEEEEECCeE--EEEEEEEC
Confidence 677889999999999999999986543 47888888
|
| >d1xj3a1 d.110.3.2 (A:154-259) Histidine kinase FixL heme domain {Bradyrhizobium japonicum [TaxId: 375]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: Heme-binding PAS domain domain: Histidine kinase FixL heme domain species: Bradyrhizobium japonicum [TaxId: 375]
Probab=99.51 E-value=2.2e-14 Score=128.88 Aligned_cols=101 Identities=18% Similarity=0.245 Sum_probs=85.3
Q ss_pred CcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCc----EEEEEEEEecCCC
Q 002051 200 QTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS----YCGRLLNYKKDGT 275 (975)
Q Consensus 200 d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~----~~~e~~~~~kdG~ 275 (975)
|||+++|. +|+|+++|++|++|+||+.+|++|+++..++++.........+...+..... ...++..+++||+
T Consensus 1 dgi~~~D~---~G~I~~~N~a~~~l~Gy~~~el~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dg~ 77 (106)
T d1xj3a1 1 DAMIVIDG---HGIIQLFSTAAERLFGWSELEAIGQNVNILMPEPDRSRHDSYISRYRTTSDPHIIGIGRIVTGKRRDGT 77 (106)
T ss_dssp CCEEEEET---TSBEEEECHHHHHHHCCCHHHHTTSBGGGGSCTTHHHHHHHHHHHHHHHCCCSSTTTCEEEEEECTTSC
T ss_pred CEEEEECC---CCcEEEEcHHHHHHhhhchHhhcCCCcccccccccccchhhhhhhhhhhcccccccccceeeeeeccce
Confidence 69999999 9999999999999999999999999998888887766666666555554432 4467888999999
Q ss_pred EEEEEEEeeeeecCCCCEEEEEEEEeccch
Q 002051 276 PFWNLLTIAPIKDDEGKVLKFIGMQVEVSK 305 (975)
Q Consensus 276 ~~w~~~~i~pi~d~~G~v~~~v~~~rDITe 305 (975)
.+|++++++|+.+.++ .+++++++||||
T Consensus 78 ~~~v~~~~~~~~~~~~--~~~~~~~~DITE 105 (106)
T d1xj3a1 78 TFPMHLSIGEMQSGGE--PYFTGFVRDLTE 105 (106)
T ss_dssp EEEEEEEEEEEEETTE--EEEEEEEEECHH
T ss_pred EEEEEEEEEEEEECCe--EEEEEEEEeCCC
Confidence 9999999999988544 468999999997
|
| >d1xj3a1 d.110.3.2 (A:154-259) Histidine kinase FixL heme domain {Bradyrhizobium japonicum [TaxId: 375]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: Heme-binding PAS domain domain: Histidine kinase FixL heme domain species: Bradyrhizobium japonicum [TaxId: 375]
Probab=99.51 E-value=1.7e-14 Score=129.60 Aligned_cols=101 Identities=18% Similarity=0.185 Sum_probs=85.5
Q ss_pred CcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCc----EEEEEEEEccCCc
Q 002051 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD----VTVQLINYTKSGK 558 (975)
Q Consensus 483 d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~----~~~e~~~~~kdG~ 558 (975)
|||+++|.+|+ |++||++|++++||+.+|++|+++..++++.........+...+..+.. ...++..+++||+
T Consensus 1 dgi~~~D~~G~---I~~~N~a~~~l~Gy~~~el~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dg~ 77 (106)
T d1xj3a1 1 DAMIVIDGHGI---IQLFSTAAERLFGWSELEAIGQNVNILMPEPDRSRHDSYISRYRTTSDPHIIGIGRIVTGKRRDGT 77 (106)
T ss_dssp CCEEEEETTSB---EEEECHHHHHHHCCCHHHHTTSBGGGGSCTTHHHHHHHHHHHHHHHCCCSSTTTCEEEEEECTTSC
T ss_pred CEEEEECCCCc---EEEEcHHHHHHhhhchHhhcCCCcccccccccccchhhhhhhhhhhcccccccccceeeeeeccce
Confidence 68999999777 9999999999999999999999988888887777766666555544332 4568899999999
Q ss_pred EEEEEEEEeeeecCCCCEEEEEEEeecCCc
Q 002051 559 KFWNLFHLQPMRDQKGEVQYFIGVQLDGSE 588 (975)
Q Consensus 559 ~~wv~~~~~pi~d~~G~i~~~v~i~rDITe 588 (975)
.+|++++++|+.++++ .+++++++||||
T Consensus 78 ~~~v~~~~~~~~~~~~--~~~~~~~~DITE 105 (106)
T d1xj3a1 78 TFPMHLSIGEMQSGGE--PYFTGFVRDLTE 105 (106)
T ss_dssp EEEEEEEEEEEEETTE--EEEEEEEEECHH
T ss_pred EEEEEEEEEEEEECCe--EEEEEEEEeCCC
Confidence 9999999999998554 568999999997
|
| >d1v9ya_ d.110.3.2 (A:) Direct oxygen sensor protein, DOS {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: Heme-binding PAS domain domain: Direct oxygen sensor protein, DOS species: Escherichia coli [TaxId: 562]
Probab=99.50 E-value=2.8e-14 Score=129.93 Aligned_cols=107 Identities=23% Similarity=0.366 Sum_probs=85.8
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcC----CcEEEE
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQ----TDVTVQ 549 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g----~~~~~e 549 (975)
|..++++++++|+++|.+|+ |+++|++|++++||+++|++|++...+.++.........+...+..+ .....+
T Consensus 3 ~~~~~e~~~d~i~~~d~~g~---i~~~N~~~~~l~Gy~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 79 (113)
T d1v9ya_ 3 FFPALEQNMMGAVLINENDE---VMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRE 79 (113)
T ss_dssp HHHHHHTCSSEEEEECTTSB---EEEECHHHHHHHSCCGGGTTTSBGGGGSCGGGTTTHHHHHHHHHC----------CE
T ss_pred HHHHHHcCcCcEEEEeCCCC---EEEEchhHhhhhccchhhhcCcceeccccccccccccccccccccccccccccccee
Confidence 88999999999999999777 99999999999999999999999888777665555444444444333 235668
Q ss_pred EEEEccCCcEEEEEEEEeeeecCCCCEEEEEEEeec
Q 002051 550 LINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLD 585 (975)
Q Consensus 550 ~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rD 585 (975)
...+++||+.+|++++++|+.+++| ..+++++||
T Consensus 80 ~~~~~~dG~~~~v~~~~~~i~~~~~--~~~~~v~rD 113 (113)
T d1v9ya_ 80 LQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVRD 113 (113)
T ss_dssp EEEECTTSCEEEEEEEEEEEEETTE--EEEEEEEEC
T ss_pred eeeccccceeEEEEEEEEEEEECCe--EEEEEEEEC
Confidence 8899999999999999999998655 347889988
|
| >d1nwza_ d.110.3.1 (A:) Photoactive yellow protein, PYP {Ectothiorhodospira halophila [TaxId: 1053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: PYP-like domain: Photoactive yellow protein, PYP species: Ectothiorhodospira halophila [TaxId: 1053]
Probab=99.36 E-value=8.4e-13 Score=123.04 Aligned_cols=108 Identities=19% Similarity=0.123 Sum_probs=89.9
Q ss_pred HHHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCC-CCCCCHHHHHHHHHHHHcCCcEEEEE
Q 002051 189 DIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQ-GAGTDPEDVAKIRETLQNGQSYCGRL 267 (975)
Q Consensus 189 ~~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~-~~~~~~~~~~~l~~~l~~g~~~~~e~ 267 (975)
.++..++|++++|++++|. +|+|+++|++|++++||+++|++|+++..++ |+.........+.+++.+|.....+.
T Consensus 17 ~~~d~~ld~~p~gi~~lD~---~G~i~~~N~a~~~l~G~~~~e~iG~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~ 93 (125)
T d1nwza_ 17 KMDDGQLDGLAFGAIQLDG---DGNILQYNAAEGDITGRDPKQVIGKNFFKDVAPCTDSPEFYGKFKEGVASGNLNTMFE 93 (125)
T ss_dssp TCCHHHHTTCSSEEEEEET---TCBEEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHhCCCccEEEEeC---CCCEEEEcHHHHHhhccchHhhcCCCHHHccCchhhhhheeeeceeeeecCCcceEEE
Confidence 4567899999999999999 9999999999999999999999999976544 55566667788889999998877777
Q ss_pred EEEecCCCEEEEEEEeeeeecCCCCEEEEEEEEecc
Q 002051 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEV 303 (975)
Q Consensus 268 ~~~~kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDI 303 (975)
..++++|..+|+++++.++. +|.-+ ..+++||
T Consensus 94 ~~~~~~G~~~~v~v~l~~~~--~g~~~--~v~V~di 125 (125)
T d1nwza_ 94 YTFDYQMTPTKVKVHMKKAL--SGDSY--WVFVKRV 125 (125)
T ss_dssp EEECTTSCCEEEEEEEEECS--SSSEE--EEEEEEC
T ss_pred EEeccCCcEEEEEEEEEEec--CCCEE--EEEEEEC
Confidence 77899999999999988774 45533 3467776
|
| >d1mzua_ d.110.3.1 (A:) PYP domain of sensor histidine kinase Ppr {Rhodospirillum centenum [TaxId: 34018]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: PYP-like domain: PYP domain of sensor histidine kinase Ppr species: Rhodospirillum centenum [TaxId: 34018]
Probab=99.33 E-value=2.1e-12 Score=117.36 Aligned_cols=96 Identities=10% Similarity=0.071 Sum_probs=80.2
Q ss_pred HHHHHHHhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCC-CCCCCCCHHHHHHHHHHHHcCCcEEEEEE
Q 002051 190 IVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRF-LQGAGTDPEDVAKIRETLQNGQSYCGRLL 268 (975)
Q Consensus 190 ~l~~ild~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~-l~~~~~~~~~~~~l~~~l~~g~~~~~e~~ 268 (975)
.+.+++|++|++|+++|. +|+|+++|+++++|+||+++|++|+++.. +.|+...+.+...+.+.+.+|......-.
T Consensus 4 ~~~A~ld~~p~gvi~~D~---~G~I~~~N~aa~~~~G~~~eellG~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~ 80 (110)
T d1mzua_ 4 MGTAEFDALPVGAIQVDG---SGVIHRYNRTESRLSGRIPERVIGRNFFTEVAPCTNIPAFSGRFMDGVTSGTLDARFDF 80 (110)
T ss_dssp --CTTGGGCSSEEEEEET---TCBEEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHTSCCEEEEEE
T ss_pred HHHHHHhCCCcEEEEEcC---CCCEEEeHHHHHHHHcCCHHHHcCCCHHHhcCChhhhHHHHHHHHHHHhccccCcceEE
Confidence 456789999999999999 99999999999999999999999999864 55556677778889999999887554444
Q ss_pred EEecCCCEEEEEEEeeeeec
Q 002051 269 NYKKDGTPFWNLLTIAPIKD 288 (975)
Q Consensus 269 ~~~kdG~~~w~~~~i~pi~d 288 (975)
..+++|..+++++++.+..+
T Consensus 81 ~l~~~G~~~~v~v~~~~~~~ 100 (110)
T d1mzua_ 81 VFDFQMAPVRVQIRMQNAGV 100 (110)
T ss_dssp EEECSSCEEEEEEEEEECSS
T ss_pred EEecCCceEEEEEEEEEecC
Confidence 46899999999999887743
|
| >d1nwza_ d.110.3.1 (A:) Photoactive yellow protein, PYP {Ectothiorhodospira halophila [TaxId: 1053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: PYP-like domain: Photoactive yellow protein, PYP species: Ectothiorhodospira halophila [TaxId: 1053]
Probab=99.28 E-value=6.2e-12 Score=117.03 Aligned_cols=106 Identities=10% Similarity=-0.005 Sum_probs=87.9
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcC-CCCCCHHHHHHHHHHHHcCCcEEEEEEE
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ-GPETDPATVRKIRAAIDNQTDVTVQLIN 552 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~-~~~~~~~~~~~~~~~l~~g~~~~~e~~~ 552 (975)
+..+++++|+||+++|.+|+ |++||+++++++||+++|++|+++..++ +++....+...+.+++..|.....+...
T Consensus 19 ~d~~ld~~p~gi~~lD~~G~---i~~~N~a~~~l~G~~~~e~iG~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~ 95 (125)
T d1nwza_ 19 DDGQLDGLAFGAIQLDGDGN---ILQYNAAEGDITGRDPKQVIGKNFFKDVAPCTDSPEFYGKFKEGVASGNLNTMFEYT 95 (125)
T ss_dssp CHHHHTTCSSEEEEEETTCB---EEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHhCCCccEEEEeCCCC---EEEEcHHHHHhhccchHhhcCCCHHHccCchhhhhheeeeceeeeecCCcceEEEEE
Confidence 78899999999999999776 9999999999999999999999975555 4455556777888888888887777777
Q ss_pred EccCCcEEEEEEEEeeeecCCCCEEEEEEEeecC
Q 002051 553 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDG 586 (975)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDI 586 (975)
.+++|+.+|+++++.++.+ |.-+ ..+++||
T Consensus 96 ~~~~G~~~~v~v~l~~~~~--g~~~--~v~V~di 125 (125)
T d1nwza_ 96 FDYQMTPTKVKVHMKKALS--GDSY--WVFVKRV 125 (125)
T ss_dssp ECTTSCCEEEEEEEEECSS--SSEE--EEEEEEC
T ss_pred eccCCcEEEEEEEEEEecC--CCEE--EEEEEEC
Confidence 8999999999999988865 4333 3466776
|
| >d1mzua_ d.110.3.1 (A:) PYP domain of sensor histidine kinase Ppr {Rhodospirillum centenum [TaxId: 34018]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: PYP-like domain: PYP domain of sensor histidine kinase Ppr species: Rhodospirillum centenum [TaxId: 34018]
Probab=99.24 E-value=8.9e-12 Score=113.10 Aligned_cols=95 Identities=12% Similarity=-0.018 Sum_probs=78.8
Q ss_pred HHHHHHhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCC-cCCCCCCHHHHHHHHHHHHcCCcEEEEEEE
Q 002051 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRF-LQGPETDPATVRKIRAAIDNQTDVTVQLIN 552 (975)
Q Consensus 474 l~~i~e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~-l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~ 552 (975)
+.++++++|++|+++|.+|+ |++||+++++|+||+++|++|+++.. +.|+.....+...+.+.+..|.........
T Consensus 5 ~~A~ld~~p~gvi~~D~~G~---I~~~N~aa~~~~G~~~eellG~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~ 81 (110)
T d1mzua_ 5 GTAEFDALPVGAIQVDGSGV---IHRYNRTESRLSGRIPERVIGRNFFTEVAPCTNIPAFSGRFMDGVTSGTLDARFDFV 81 (110)
T ss_dssp -CTTGGGCSSEEEEEETTCB---EEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHTSCCEEEEEEE
T ss_pred HHHHHhCCCcEEEEEcCCCC---EEEeHHHHHHHHcCCHHHHcCCCHHHhcCChhhhHHHHHHHHHHHhccccCcceEEE
Confidence 56789999999999999666 99999999999999999999999754 445556667778888889888875444444
Q ss_pred EccCCcEEEEEEEEeeeec
Q 002051 553 YTKSGKKFWNLFHLQPMRD 571 (975)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d 571 (975)
.+++|+.+++++++.+..+
T Consensus 82 l~~~G~~~~v~v~~~~~~~ 100 (110)
T d1mzua_ 82 FDFQMAPVRVQIRMQNAGV 100 (110)
T ss_dssp EECSSCEEEEEEEEEECSS
T ss_pred EecCCceEEEEEEEEEecC
Confidence 6889999999999988765
|
| >d1ll8a_ d.110.3.5 (A:) N-terminal PAS domain of Pas kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: N-terminal PAS domain of Pas kinase domain: N-terminal PAS domain of Pas kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.19 E-value=2.6e-12 Score=117.50 Aligned_cols=105 Identities=12% Similarity=0.159 Sum_probs=85.5
Q ss_pred HhccCcEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCc----EEEEEEEEe
Q 002051 196 STFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS----YCGRLLNYK 271 (975)
Q Consensus 196 d~~~d~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~----~~~e~~~~~ 271 (975)
+.+.+||+++|.. +|+|+++|++|+++|||+.+|++|+++..++++.+...+...+...+.++.. +..++..++
T Consensus 5 ~~~n~AI~~id~~--~G~I~~~N~a~~~l~Gy~~~el~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 82 (114)
T d1ll8a_ 5 PEFNKAIFTVDAK--TTEILVANDKACGLLGYSSQDLIGQKLTQFFLRSDSDVVEALSEEHMEADGHAAVVFGTVVDIIS 82 (114)
T ss_dssp TTTTCEEEEEETT--TCBEEEECTTHHHHHTCCTTTTTTSBGGGGSSCTTTHHHHHTTSSTTSSSSCSSCCCSSSEEECC
T ss_pred hhcCcEEEEEECC--CCEEEEECHHHHHhhcCCHHHHcCCCeeeecCcccHHHHHHHHHHHHhcCCCccceeeEEEEEEc
Confidence 4578899999952 6999999999999999999999999999999988887766655565655532 223567789
Q ss_pred cCCCEEEEEEEeeeeecCCCCEEEEEEEEeccc
Q 002051 272 KDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (975)
Q Consensus 272 kdG~~~w~~~~i~pi~d~~G~v~~~v~~~rDIT 304 (975)
++|+.+|++++++++..+ |+. .++++++||+
T Consensus 83 ~~G~~~pvevs~~~i~~~-~~~-~~l~vi~dV~ 113 (114)
T d1ll8a_ 83 RSGEKIPVSVWMKRMRQE-RRL-CCVVVLEPVE 113 (114)
T ss_dssp TTCCCEEEECCEECCBSS-SSB-EEEEEEEECC
T ss_pred cCCcEEEEEEEEEEEEEC-CeE-EEEEEEEECc
Confidence 999999999999999764 444 4789999994
|
| >d1ll8a_ d.110.3.5 (A:) N-terminal PAS domain of Pas kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: N-terminal PAS domain of Pas kinase domain: N-terminal PAS domain of Pas kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.19 E-value=2.8e-12 Score=117.30 Aligned_cols=105 Identities=14% Similarity=0.174 Sum_probs=85.0
Q ss_pred HhccCcEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCCc----EEEEEEEEc
Q 002051 479 ERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD----VTVQLINYT 554 (975)
Q Consensus 479 e~~~d~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~~----~~~e~~~~~ 554 (975)
+.+.++|+++|.+ +|.|++||++++++|||+++|++|++...+.++++.......+...+..+.. +..++..++
T Consensus 5 ~~~n~AI~~id~~--~G~I~~~N~a~~~l~Gy~~~el~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 82 (114)
T d1ll8a_ 5 PEFNKAIFTVDAK--TTEILVANDKACGLLGYSSQDLIGQKLTQFFLRSDSDVVEALSEEHMEADGHAAVVFGTVVDIIS 82 (114)
T ss_dssp TTTTCEEEEEETT--TCBEEEECTTHHHHHTCCTTTTTTSBGGGGSSCTTTHHHHHTTSSTTSSSSCSSCCCSSSEEECC
T ss_pred hhcCcEEEEEECC--CCEEEEECHHHHHhhcCCHHHHcCCCeeeecCcccHHHHHHHHHHHHhcCCCccceeeEEEEEEc
Confidence 4578899999964 3449999999999999999999999999999988887766655555554432 334788899
Q ss_pred cCCcEEEEEEEEeeeecCCCCEEEEEEEeecCC
Q 002051 555 KSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (975)
Q Consensus 555 kdG~~~wv~~~~~pi~d~~G~i~~~v~i~rDIT 587 (975)
+||+.+|++++++++..++ +.. ++++.+||+
T Consensus 83 ~~G~~~pvevs~~~i~~~~-~~~-~l~vi~dV~ 113 (114)
T d1ll8a_ 83 RSGEKIPVSVWMKRMRQER-RLC-CVVVLEPVE 113 (114)
T ss_dssp TTCCCEEEECCEECCBSSS-SBE-EEEEEEECC
T ss_pred cCCcEEEEEEEEEEEEECC-eEE-EEEEEEECc
Confidence 9999999999999998654 443 689999993
|
| >d1oj5a_ d.110.3.8 (A:) PAS domain of steroid receptor coactivator 1A, NCo-A1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: PAS domain of steroid receptor coactivator 1A, NCo-A1 domain: PAS domain of steroid receptor coactivator 1A, NCo-A1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.81 E-value=9.6e-10 Score=99.12 Aligned_cols=95 Identities=12% Similarity=0.088 Sum_probs=75.7
Q ss_pred EEEEcCCCCCCCeeecCHHHHHHcCCCh-hhhcCCCCCCcCCCCCCHH--HHHHHHHHHHcCCcEEEEEEEEccCCcEEE
Q 002051 485 FVITDPRLPDNPIIFASDSFLELTEYSR-EEILGRNCRFLQGPETDPA--TVRKIRAAIDNQTDVTVQLINYTKSGKKFW 561 (975)
Q Consensus 485 i~i~D~~g~dg~I~~vN~a~~~l~Gy~~-eEllG~~~~~l~~~~~~~~--~~~~~~~~l~~g~~~~~e~~~~~kdG~~~w 561 (975)
+.-.|.+|+ |+++|+++++++||.+ +|++|+++..|+||+|.+. .......++..|.....++++++|||+.+|
T Consensus 5 ~trh~~~g~---~~~vd~~~~~~~gy~~~eelig~s~~~f~HPeD~~~~~~~~~~~~~~~~g~~~~~~yR~~~kdG~~vW 81 (109)
T d1oj5a_ 5 MTKQDTTGK---IISIDTSSLRAAGRTGWEDLVRKCIYAFFQPQGREPSYARQLFQEVMTRGTASSPSYRFILNDGTMLS 81 (109)
T ss_dssp EEEECTTCC---EEEEECHHHHTTCCSCHHHHHHHHHHHHTSCBTTBCCHHHHHHHHHHHHSEEECCCEEEECTTSCEEE
T ss_pred EEEECCCce---EEEECHHHhhHhhcCCHHHHcCCcHHHeECcccchHHHhhHHHHHHHhhcccchhhhhhhhccCcEEE
Confidence 344577666 9999999999999985 8999999999999998653 334456777888888899999999999999
Q ss_pred EEEEEeeeecCCC-CEEEEEEE
Q 002051 562 NLFHLQPMRDQKG-EVQYFIGV 582 (975)
Q Consensus 562 v~~~~~pi~d~~G-~i~~~v~i 582 (975)
++.++.+++|..| +...++|+
T Consensus 82 v~t~~~~~~~~~~~~~~~Ii~~ 103 (109)
T d1oj5a_ 82 AHTRCKLCYPQSPDMQPFIMGI 103 (109)
T ss_dssp EEEEEEEECC----CCCEEEEE
T ss_pred EEEEEEEEECCCCCcccEEEEE
Confidence 9999999998644 44444443
|
| >d1oj5a_ d.110.3.8 (A:) PAS domain of steroid receptor coactivator 1A, NCo-A1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: PAS domain of steroid receptor coactivator 1A, NCo-A1 domain: PAS domain of steroid receptor coactivator 1A, NCo-A1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.81 E-value=8.6e-10 Score=99.43 Aligned_cols=95 Identities=12% Similarity=0.084 Sum_probs=74.6
Q ss_pred EEEEeCCCCCCceEeccHHHHHHhCCCh-hhhcCCCCCCCCCCCCCHH--HHHHHHHHHHcCCcEEEEEEEEecCCCEEE
Q 002051 202 FVVSDATKPDYPIMYASAGFFKMTGYTS-KEVVGRNCRFLQGAGTDPE--DVAKIRETLQNGQSYCGRLLNYKKDGTPFW 278 (975)
Q Consensus 202 i~i~D~~~~~G~I~~~N~a~~~l~Gys~-eEliG~~~~~l~~~~~~~~--~~~~l~~~l~~g~~~~~e~~~~~kdG~~~w 278 (975)
+.-.|. +|+|+++|+++++++||.+ +|++|+++..+++|++.+. ........+..|.....+++.++|||+.+|
T Consensus 5 ~trh~~---~g~~~~vd~~~~~~~gy~~~eelig~s~~~f~HPeD~~~~~~~~~~~~~~~~g~~~~~~yR~~~kdG~~vW 81 (109)
T d1oj5a_ 5 MTKQDT---TGKIISIDTSSLRAAGRTGWEDLVRKCIYAFFQPQGREPSYARQLFQEVMTRGTASSPSYRFILNDGTMLS 81 (109)
T ss_dssp EEEECT---TCCEEEEECHHHHTTCCSCHHHHHHHHHHHHTSCBTTBCCHHHHHHHHHHHHSEEECCCEEEECTTSCEEE
T ss_pred EEEECC---CceEEEECHHHhhHhhcCCHHHHcCCcHHHeECcccchHHHhhHHHHHHHhhcccchhhhhhhhccCcEEE
Confidence 344567 9999999999999999985 8999999998888887542 334456677888888889999999999999
Q ss_pred EEEEeeeeecCCCCE-EEEEEE
Q 002051 279 NLLTIAPIKDDEGKV-LKFIGM 299 (975)
Q Consensus 279 ~~~~i~pi~d~~G~v-~~~v~~ 299 (975)
++.+..+++|..|+. .+++|+
T Consensus 82 v~t~~~~~~~~~~~~~~~Ii~~ 103 (109)
T d1oj5a_ 82 AHTRCKLCYPQSPDMQPFIMGI 103 (109)
T ss_dssp EEEEEEEECC----CCCEEEEE
T ss_pred EEEEEEEEECCCCCcccEEEEE
Confidence 999999999875544 344443
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=97.26 E-value=0.00027 Score=72.52 Aligned_cols=115 Identities=13% Similarity=0.118 Sum_probs=71.9
Q ss_pred CCcccccccccCCceEEEEEEEeCCCeEEEEEEeccch-------------------------hccccccCCeEEEEEec
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-------------------------MLNRNKTKTHVCLITDY 723 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l~~~~-------------------------~~~~~~~~~~~~lV~Ey 723 (975)
..|+..+..+.++.+.||++. ..++.+++|+..... ++......+..|+||++
T Consensus 14 ~~~~~~~~~~G~s~~~v~rv~--~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~ 91 (263)
T d1j7la_ 14 EKYRCVKDTEGMSPAKVYKLV--GENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSE 91 (263)
T ss_dssp TTSEEEECSCCCSSSEEEEEE--CSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEEC
T ss_pred hceEEEEcCCCCCCCcEEEEE--eCCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEe
Confidence 467777776666668999875 356677888875431 11111246778999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH------------------------------------------
Q 002051 724 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH------------------------------------------ 761 (975)
Q Consensus 724 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~yLH------------------------------------------ 761 (975)
++|.++....... .. ...++.++...+..||
T Consensus 92 l~G~~~~~~~~~~----~~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (263)
T d1j7la_ 92 ADGVLCSEEYEDE----QS---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPF 164 (263)
T ss_dssp CSSEEHHHHTTTC----SC---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSC
T ss_pred ccccccccccccc----cc---HHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccc
Confidence 9988775543210 00 1112222222333333
Q ss_pred -----------HC------CCeecCCCCCCEEEecCCcEEEeeccCCC
Q 002051 762 -----------CQ------GIIYRDLKPENVLLQGNGHVSLTDFDLSC 792 (975)
Q Consensus 762 -----------~~------gIiHrDIKp~NILl~~~g~vkL~DFG~a~ 792 (975)
.. .++|+|+.|.|||++.++.+.|+||+.+.
T Consensus 165 ~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T d1j7la_ 165 KDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred hHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcc
Confidence 21 27999999999999977666799999873
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=96.41 E-value=0.0019 Score=70.36 Aligned_cols=29 Identities=14% Similarity=0.181 Sum_probs=21.9
Q ss_pred ccccccCCceEEEEEEEeCCCeEEEEEEe
Q 002051 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAM 702 (975)
Q Consensus 674 ~~~LG~G~fG~Vy~a~~~~t~~~vAiK~l 702 (975)
.+.||.|....||++.+..+++.+++|.-
T Consensus 31 ~~eig~G~~N~vfrV~~~~~~~svivKqa 59 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQEHDRALIIKQA 59 (392)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEE
T ss_pred EEEeCCCceEeEEEEEeCCCCeEEEEecC
Confidence 45789999999999998778889999964
|
| >d2oola2 d.110.3.9 (A:26-139) Sensor protein PhyB2 {Rhodopseudomonas palustris [TaxId: 1076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: BphP N-terminal domain-like domain: Sensor protein PhyB2 species: Rhodopseudomonas palustris [TaxId: 1076]
Probab=96.34 E-value=0.00096 Score=59.12 Aligned_cols=48 Identities=10% Similarity=0.061 Sum_probs=38.8
Q ss_pred cEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHH
Q 002051 484 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATV 533 (975)
Q Consensus 484 ~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~ 533 (975)
.++++|.. +++|+||+++..+++|+++++++|++...++++++...+.
T Consensus 19 ~Llvld~~--d~~I~~vS~N~~~lLG~~~~~llG~~l~dll~~~~~~~i~ 66 (114)
T d2oola2 19 YLFVVSET--DLRIASVSANVEDLLRQPPASLLNVPIAHYLTAASAARLT 66 (114)
T ss_dssp EEEEECTT--TCBEEEEETTHHHHHSSCGGGGTTCBGGGGBCHHHHHHHH
T ss_pred EEEEEECC--CCEEEEEcCCHHHHhCCChHHHcCCCHHHhCCHHHHHHHH
Confidence 45666753 4559999999999999999999999999998876554443
|
| >d2oola2 d.110.3.9 (A:26-139) Sensor protein PhyB2 {Rhodopseudomonas palustris [TaxId: 1076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: BphP N-terminal domain-like domain: Sensor protein PhyB2 species: Rhodopseudomonas palustris [TaxId: 1076]
Probab=96.00 E-value=0.0016 Score=57.59 Aligned_cols=54 Identities=17% Similarity=0.195 Sum_probs=41.3
Q ss_pred cEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcC
Q 002051 201 TFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNG 260 (975)
Q Consensus 201 ~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g 260 (975)
.++++|. ++|+|+|++++...++|+++++++|+++..++++.+ ...+++.+...
T Consensus 19 ~Llvld~--~d~~I~~vS~N~~~lLG~~~~~llG~~l~dll~~~~----~~~i~~~l~~~ 72 (114)
T d2oola2 19 YLFVVSE--TDLRIASVSANVEDLLRQPPASLLNVPIAHYLTAAS----AARLTHALHGG 72 (114)
T ss_dssp EEEEECT--TTCBEEEEETTHHHHHSSCGGGGTTCBGGGGBCHHH----HHHHHHHHCC-
T ss_pred EEEEEEC--CCCEEEEEcCCHHHHhCCChHHHcCCCHHHhCCHHH----HHHHHHHHhcC
Confidence 4566664 279999999999999999999999999998887644 34455555433
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=95.26 E-value=0.0088 Score=60.23 Aligned_cols=28 Identities=11% Similarity=0.105 Sum_probs=24.9
Q ss_pred CeecCCCCCCEEEecCCcEEEeeccCCC
Q 002051 765 IIYRDLKPENVLLQGNGHVSLTDFDLSC 792 (975)
Q Consensus 765 IiHrDIKp~NILl~~~g~vkL~DFG~a~ 792 (975)
++|+|+.|.|||++.++.+-|+||+.+.
T Consensus 177 liHgD~~~~Nvl~~~~~~~~iID~~~~~ 204 (255)
T d1nd4a_ 177 VTHGDACLPNIMVENGRFSGFIDCGRLG 204 (255)
T ss_dssp EECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred EEeCCCCCcceEEeCCceEEEEEchhcc
Confidence 8999999999999987667899999873
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=92.81 E-value=0.07 Score=55.33 Aligned_cols=30 Identities=37% Similarity=0.643 Sum_probs=26.9
Q ss_pred CCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 764 GIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 764 gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
|+||+|+.++||+++.+...-++||+.++.
T Consensus 184 giIHgDl~~dNvl~~~~~v~gvIDF~~~~~ 213 (316)
T d2ppqa1 184 GVIHADLFQDNVFFLGDELSGLIDFYFACN 213 (316)
T ss_dssp EEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred ccccCCcchhhhhcccccceeEeccccccc
Confidence 799999999999999887778999998843
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=92.36 E-value=0.052 Score=56.83 Aligned_cols=28 Identities=21% Similarity=0.199 Sum_probs=23.1
Q ss_pred CCeecCCCCCCEEEecCCcEEEeeccCCCc
Q 002051 764 GIIYRDLKPENVLLQGNGHVSLTDFDLSCL 793 (975)
Q Consensus 764 gIiHrDIKp~NILl~~~g~vkL~DFG~a~~ 793 (975)
++||+|+.|.|||++. + ..++||+-++.
T Consensus 193 ~liHgDlh~~NvL~~~-~-~~~IDFdd~~~ 220 (325)
T d1zyla1 193 LRLHGDCHAGNILWRD-G-PMFVDLDDARN 220 (325)
T ss_dssp EECCSSCSGGGEEESS-S-EEECCCTTCCE
T ss_pred eeecCCCCcccEEEeC-C-ceEEechhccc
Confidence 6899999999999974 3 45899998743
|
| >d2veaa3 d.110.3.9 (A:4-130) Phytochrome-like protein Cph1 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: BphP N-terminal domain-like domain: Phytochrome-like protein Cph1 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=90.31 E-value=0.076 Score=47.24 Aligned_cols=47 Identities=19% Similarity=0.087 Sum_probs=35.3
Q ss_pred cEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHH
Q 002051 484 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPAT 532 (975)
Q Consensus 484 ~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~ 532 (975)
.++++|.. +++|++++....+++|+++++++|++...+..++....+
T Consensus 28 ~LLald~~--~~~I~~aS~N~~~~lG~~~~~lLG~~l~~ll~~~~~~~l 74 (127)
T d2veaa3 28 LVVVLQEP--DLTISQISANCTGILGRSPEDLLGRTLGEVFDSFQIDPI 74 (127)
T ss_dssp EEEEEETT--TTEEEEEETTHHHHTSCCTTTSSTTTTTTTSBCC-----
T ss_pred EEEEEECC--CCEEEEEcCCHHHHhCcChHHHcCCCHHHHCCHHHHHHH
Confidence 34555653 566999999999999999999999999988877655443
|
| >d2veaa3 d.110.3.9 (A:4-130) Phytochrome-like protein Cph1 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: BphP N-terminal domain-like domain: Phytochrome-like protein Cph1 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=89.99 E-value=0.086 Score=46.88 Aligned_cols=46 Identities=22% Similarity=0.211 Sum_probs=36.1
Q ss_pred cEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCCCCCHH
Q 002051 201 TFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPE 248 (975)
Q Consensus 201 ~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~ 248 (975)
.++++|. .+++|+.++.....++|+++++++|+++..++++.....
T Consensus 28 ~LLald~--~~~~I~~aS~N~~~~lG~~~~~lLG~~l~~ll~~~~~~~ 73 (127)
T d2veaa3 28 LVVVLQE--PDLTISQISANCTGILGRSPEDLLGRTLGEVFDSFQIDP 73 (127)
T ss_dssp EEEEEET--TTTEEEEEETTHHHHTSCCTTTSSTTTTTTTSBCC----
T ss_pred EEEEEEC--CCCEEEEEcCCHHHHhCcChHHHcCCCHHHHCCHHHHHH
Confidence 4566663 278999999999999999999999999998887655433
|
| >d2o9ca2 d.110.3.9 (A:4-130) Bacteriophytochrome BphP {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: BphP N-terminal domain-like domain: Bacteriophytochrome BphP species: Deinococcus radiodurans [TaxId: 1299]
Probab=87.05 E-value=0.34 Score=42.81 Aligned_cols=76 Identities=11% Similarity=0.039 Sum_probs=49.1
Q ss_pred cEEEEcCCCCCCCeeecCHHHHHHcCCChhhhcCCCCCCcCCCCCCHHHHHHHHHHHHcCC--cEEEEEEEEccCCcEEE
Q 002051 484 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQT--DVTVQLINYTKSGKKFW 561 (975)
Q Consensus 484 ~i~i~D~~g~dg~I~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~~~~~l~~g~--~~~~e~~~~~kdG~~~w 561 (975)
.++++|.. ++.|++++....+++|++.++++|++...+.+.. .. .+...+.... ...........+|..+|
T Consensus 37 ~LLald~~--~~~I~~~S~N~~~~lG~~~~~llG~~l~~ll~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 109 (127)
T d2o9ca2 37 ALLTADGH--SGEVLQMSLNAATFLGQEPTVLRGQTLAALLPEQ-WP----ALQAALPPGCPDALQYRATLDWPAAGHLS 109 (127)
T ss_dssp EEEEEETT--TCBEEEEETTHHHHHSSCHHHHTTCBHHHHCTTT-HH----HHHHHSCTTCCTTCCEEEEECCSSSSEEE
T ss_pred EEEEEECC--CCEEEEECCCHHHHhCCChHHHcCCCHHHHCCHH-HH----HHHHHhhhcCcccccceeeeecCCCceEE
Confidence 44555753 5669999999999999999999999988887532 21 2222222221 22334444456777777
Q ss_pred EEEEE
Q 002051 562 NLFHL 566 (975)
Q Consensus 562 v~~~~ 566 (975)
+.+..
T Consensus 110 ~~~Hr 114 (127)
T d2o9ca2 110 LTVHR 114 (127)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76654
|
| >d2o9ca2 d.110.3.9 (A:4-130) Bacteriophytochrome BphP {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: BphP N-terminal domain-like domain: Bacteriophytochrome BphP species: Deinococcus radiodurans [TaxId: 1299]
Probab=86.72 E-value=0.35 Score=42.68 Aligned_cols=41 Identities=12% Similarity=0.126 Sum_probs=34.9
Q ss_pred cEEEEeCCCCCCceEeccHHHHHHhCCChhhhcCCCCCCCCCC
Q 002051 201 TFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGA 243 (975)
Q Consensus 201 ~i~i~D~~~~~G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~ 243 (975)
.++++|.. +++|++++.....++|++.++++|+++..+++.
T Consensus 37 ~LLald~~--~~~I~~~S~N~~~~lG~~~~~llG~~l~~ll~~ 77 (127)
T d2o9ca2 37 ALLTADGH--SGEVLQMSLNAATFLGQEPTVLRGQTLAALLPE 77 (127)
T ss_dssp EEEEEETT--TCBEEEEETTHHHHHSSCHHHHTTCBHHHHCTT
T ss_pred EEEEEECC--CCEEEEECCCHHHHhCCChHHHcCCCHHHHCCH
Confidence 45666642 799999999999999999999999999887754
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=85.41 E-value=0.38 Score=51.31 Aligned_cols=34 Identities=15% Similarity=0.233 Sum_probs=24.3
Q ss_pred CCcccccccccCCceEEEEEEEeC-------CCeEEEEEEec
Q 002051 669 QHFRPIKPLGSGDTGSVHLVELCG-------SGQYFAMKAMD 703 (975)
Q Consensus 669 ~~y~i~~~LG~G~fG~Vy~a~~~~-------t~~~vAiK~l~ 703 (975)
+.+++ +.|+.|-.-.+|++.... ..+.|.+++.-
T Consensus 43 ~~l~v-~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g 83 (395)
T d1nw1a_ 43 EHLRI-SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF 83 (395)
T ss_dssp GGEEE-EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC
T ss_pred cceEE-EEcCCccccceEEEEeCCCCccccCCCCcEEEEecC
Confidence 33433 578899999999998753 24567788764
|