Query 002053
Match_columns 974
No_of_seqs 720 out of 3708
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 10:22:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002053.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002053hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1oy3_D Transcription factor in 100.0 3.7E-34 1.3E-38 305.3 18.0 255 417-713 6-266 (282)
2 1n11_A Ankyrin; clathrin, BAND 100.0 8.8E-33 3E-37 315.7 27.2 291 420-728 47-372 (437)
3 1n11_A Ankyrin; clathrin, BAND 100.0 1.8E-32 6.2E-37 313.1 28.4 276 420-713 80-385 (437)
4 1wdy_A 2-5A-dependent ribonucl 100.0 1.7E-32 5.9E-37 291.3 25.8 251 420-727 5-280 (285)
5 3utm_A Tankyrase-1; tankyrase, 100.0 4.1E-32 1.4E-36 297.7 25.0 267 418-721 56-329 (351)
6 2xai_A ASB-9, ankyrin repeat a 100.0 1.1E-32 3.9E-37 294.7 17.7 235 421-712 4-245 (261)
7 1wdy_A 2-5A-dependent ribonucl 100.0 1.2E-31 4.2E-36 284.7 24.2 236 420-703 39-284 (285)
8 4g8k_A 2-5A-dependent ribonucl 100.0 1.4E-31 4.9E-36 295.6 24.9 272 420-725 25-326 (337)
9 1yyh_A HN1;, notch 1, ankyrin 100.0 1.1E-31 3.6E-36 285.5 21.6 222 417-690 7-246 (253)
10 3ljn_A Hypothetical protein; a 100.0 2.4E-32 8.2E-37 305.0 13.6 237 417-690 17-267 (364)
11 3b7b_A Euchromatic histone-lys 100.0 6.9E-31 2.3E-35 274.2 23.4 209 418-713 9-218 (237)
12 1k1a_A B-cell lymphoma 3-encod 100.0 6E-31 2E-35 274.5 22.0 205 418-713 7-224 (241)
13 3d9h_A CDNA FLJ77766, highly s 100.0 6.3E-31 2.1E-35 285.6 21.8 235 421-713 16-263 (285)
14 4b93_B Ankyrin repeat domain-c 100.0 3.4E-31 1.2E-35 286.8 18.9 212 419-714 10-227 (269)
15 3d9h_A CDNA FLJ77766, highly s 100.0 3.2E-31 1.1E-35 288.0 18.6 218 416-690 55-276 (285)
16 4g8k_A 2-5A-dependent ribonucl 100.0 1.9E-30 6.6E-35 286.6 23.6 244 420-701 59-330 (337)
17 2dzn_A Probable 26S proteasome 100.0 2.5E-30 8.4E-35 268.0 21.5 207 421-713 3-216 (228)
18 3aji_A 26S proteasome non-ATPa 100.0 9.4E-31 3.2E-35 272.1 18.1 216 422-690 8-228 (231)
19 2fo1_E LIN-12 protein; beta-ba 100.0 2.2E-30 7.5E-35 292.2 18.4 222 419-690 124-369 (373)
20 2f8y_A Notch homolog 1, transl 100.0 5.3E-30 1.8E-34 265.0 18.1 208 431-690 2-214 (223)
21 1s70_B 130 kDa myosin-binding 100.0 3E-30 1E-34 278.7 16.6 207 421-714 41-274 (299)
22 2fo1_E LIN-12 protein; beta-ba 100.0 2.1E-30 7.1E-35 292.4 16.0 235 418-713 92-354 (373)
23 1yyh_A HN1;, notch 1, ankyrin 100.0 6.5E-30 2.2E-34 271.7 18.5 210 450-713 5-231 (253)
24 3eu9_A Huntingtin-interacting 100.0 3.7E-29 1.3E-33 259.3 22.0 219 419-690 8-233 (240)
25 2rfa_A Transient receptor pote 100.0 2.6E-29 8.9E-34 261.8 18.4 203 421-690 4-220 (232)
26 2xai_A ASB-9, ankyrin repeat a 100.0 4.1E-29 1.4E-33 267.1 20.2 202 454-713 2-207 (261)
27 1ikn_D Protein (I-kappa-B-alph 100.0 9.3E-30 3.2E-34 266.6 13.4 202 418-710 6-224 (236)
28 4gpm_A Engineered protein OR26 100.0 8.2E-29 2.8E-33 250.6 19.1 113 577-700 52-164 (169)
29 4b93_B Ankyrin repeat domain-c 100.0 2.6E-29 9E-34 272.0 14.4 189 420-690 52-242 (269)
30 3utm_A Tankyrase-1; tankyrase, 100.0 5.6E-28 1.9E-32 264.8 23.8 251 420-728 24-308 (351)
31 3ljn_A Hypothetical protein; a 100.0 2.8E-29 9.6E-34 280.2 13.5 211 450-713 15-252 (364)
32 3hra_A Ankyrin repeat family p 100.0 4.7E-28 1.6E-32 246.4 20.2 189 420-690 5-201 (201)
33 3kea_A K1L; tropism, ANK repea 100.0 1.5E-28 5.3E-33 267.1 14.4 198 416-703 27-226 (285)
34 2etb_A Transient receptor pote 100.0 1.9E-28 6.4E-33 259.8 14.5 205 421-690 3-244 (256)
35 3aji_A 26S proteasome non-ATPa 100.0 1.6E-27 5.6E-32 247.6 20.0 205 454-714 5-214 (231)
36 1k1a_A B-cell lymphoma 3-encod 100.0 3.7E-28 1.3E-32 253.3 14.9 190 419-690 45-239 (241)
37 2pnn_A Transient receptor pote 100.0 2.9E-28 9.9E-33 261.2 13.1 222 419-708 12-270 (273)
38 1oy3_D Transcription factor in 99.9 3.1E-27 1.1E-31 251.7 19.6 195 450-728 4-253 (282)
39 3b7b_A Euchromatic histone-lys 99.9 8.3E-27 2.8E-31 243.2 19.7 188 419-688 43-231 (237)
40 2dzn_A Probable 26S proteasome 99.9 7.6E-27 2.6E-31 241.7 16.7 189 417-688 33-226 (228)
41 3eu9_A Huntingtin-interacting 99.9 2E-26 6.9E-31 238.8 19.6 208 451-713 5-218 (240)
42 1s70_B 130 kDa myosin-binding 99.9 2.3E-26 8E-31 248.2 20.7 213 417-689 70-286 (299)
43 3jxi_A Vanilloid receptor-rela 99.9 3.6E-27 1.2E-31 250.2 12.8 207 421-690 6-248 (260)
44 3kea_A K1L; tropism, ANK repea 99.9 2.3E-26 7.9E-31 249.9 18.3 206 431-728 11-223 (285)
45 1ikn_D Protein (I-kappa-B-alph 99.9 2.2E-26 7.6E-31 240.9 16.7 193 450-727 3-211 (236)
46 2f8y_A Notch homolog 1, transl 99.9 9.8E-26 3.3E-30 233.0 20.2 201 470-724 4-215 (223)
47 4hbd_A KN motif and ankyrin re 99.9 2.1E-26 7.1E-31 249.4 15.4 194 422-690 78-273 (276)
48 2rfa_A Transient receptor pote 99.9 9.3E-26 3.2E-30 234.9 18.9 171 454-713 2-205 (232)
49 4gpm_A Engineered protein OR26 99.9 1.3E-25 4.3E-30 227.3 18.3 148 565-724 8-160 (169)
50 1sw6_A Regulatory protein SWI6 99.9 6E-27 2.1E-31 259.7 9.0 224 429-713 56-324 (327)
51 3v30_A DNA-binding protein rfx 99.9 9.5E-26 3.3E-30 224.7 16.6 121 577-708 51-171 (172)
52 2y1l_E Darpin-8.4; hydrolase-i 99.9 4.7E-25 1.6E-29 220.0 18.9 108 577-690 62-169 (169)
53 2etb_A Transient receptor pote 99.9 1.3E-25 4.3E-30 238.1 15.0 179 455-713 2-229 (256)
54 2rfm_A Putative ankyrin repeat 99.9 3E-25 1E-29 225.3 16.3 161 450-690 30-190 (192)
55 3hra_A Ankyrin repeat family p 99.9 1.4E-24 4.9E-29 220.6 20.8 176 453-713 3-186 (201)
56 3v31_A Ankyrin repeat family A 99.9 9.6E-25 3.3E-29 216.4 17.7 108 577-690 51-158 (167)
57 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.2E-24 3.9E-29 214.1 16.9 156 454-690 4-160 (162)
58 3f6q_A Integrin-linked protein 99.9 9.9E-25 3.4E-29 219.4 16.3 118 577-705 54-171 (179)
59 1awc_B Protein (GA binding pro 99.9 4E-24 1.4E-28 209.5 17.6 104 577-686 49-152 (153)
60 2pnn_A Transient receptor pote 99.9 1.2E-24 4.2E-29 233.0 14.2 197 450-724 8-257 (273)
61 1sw6_A Regulatory protein SWI6 99.9 9.9E-26 3.4E-30 249.9 5.9 211 423-678 100-327 (327)
62 1ihb_A P18-INK4C(INK6), cyclin 99.9 3.6E-24 1.2E-28 210.5 14.2 156 421-653 6-162 (162)
63 3twr_A Tankyrase-2; ankyrin re 99.9 5.8E-24 2E-28 210.3 13.7 107 577-690 57-163 (165)
64 2rfm_A Putative ankyrin repeat 99.9 1.4E-23 4.8E-28 213.0 15.3 159 417-651 32-190 (192)
65 3jxi_A Vanilloid receptor-rela 99.9 1.3E-23 4.3E-28 222.9 15.5 186 452-713 2-233 (260)
66 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2.3E-23 7.8E-28 203.8 15.4 153 455-689 2-155 (156)
67 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.6E-24 5.3E-29 229.1 7.1 117 577-704 52-171 (239)
68 2y1l_E Darpin-8.4; hydrolase-i 99.9 2.3E-22 8E-27 200.4 18.7 140 562-713 15-154 (169)
69 2vge_A RELA-associated inhibit 99.9 8.7E-25 3E-29 230.9 -1.5 190 436-713 1-196 (229)
70 1awc_B Protein (GA binding pro 99.9 3.4E-22 1.2E-26 195.7 17.1 139 563-714 4-142 (153)
71 3t8k_A Uncharacterized protein 99.9 1.6E-23 5.6E-28 214.8 7.2 108 577-690 57-177 (186)
72 3v31_A Ankyrin repeat family A 99.9 5E-22 1.7E-26 196.8 16.6 137 565-713 7-143 (167)
73 3twr_A Tankyrase-2; ankyrin re 99.9 5.2E-22 1.8E-26 196.3 16.5 141 562-714 9-150 (165)
74 3f6q_A Integrin-linked protein 99.9 7.4E-22 2.5E-26 198.4 17.4 137 565-713 9-146 (179)
75 4hbd_A KN motif and ankyrin re 99.9 7.9E-23 2.7E-27 221.3 9.8 126 577-713 126-258 (276)
76 1bi7_B P16INK4A, MTS1, multipl 99.9 1.4E-22 4.7E-27 199.7 10.2 133 565-710 16-149 (156)
77 1bd8_A P19INK4D CDK4/6 inhibit 99.9 8.1E-22 2.8E-26 192.8 15.2 151 422-650 4-155 (156)
78 1ycs_B 53BP2, P53BP2; ankyrin 99.9 3.2E-23 1.1E-27 219.0 5.6 190 420-688 5-200 (239)
79 3v30_A DNA-binding protein rfx 99.9 1.1E-21 3.6E-26 195.4 16.2 137 565-713 6-143 (172)
80 2jab_A H10-2-G3; HER2, darpin, 99.9 3.6E-21 1.2E-25 185.2 16.5 123 561-690 14-136 (136)
81 3c5r_A BARD-1, BRCA1-associate 99.9 2E-21 6.7E-26 186.8 13.4 117 585-713 1-117 (137)
82 1d9s_A Cyclin-dependent kinase 99.9 1.1E-21 3.9E-26 188.7 10.5 117 585-713 2-119 (136)
83 1bi7_B P16INK4A, MTS1, multipl 99.9 1.5E-21 5.1E-26 192.3 11.3 143 451-674 8-151 (156)
84 1d9s_A Cyclin-dependent kinase 99.8 1.4E-21 4.9E-26 188.0 10.0 107 577-690 27-134 (136)
85 2vge_A RELA-associated inhibit 99.8 2.5E-21 8.7E-26 204.3 8.1 134 567-711 27-162 (229)
86 1n0r_A 4ANK, 4 ankyrin repeats 99.8 3.6E-20 1.2E-24 173.0 14.8 119 565-690 6-124 (126)
87 3aaa_C Myotrophin, protein V-1 99.8 3.4E-20 1.2E-24 175.0 12.8 111 592-713 4-114 (123)
88 3t8k_A Uncharacterized protein 99.8 1.3E-20 4.6E-25 193.2 7.5 133 567-713 12-162 (186)
89 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.1E-19 3.9E-24 163.4 12.2 91 594-690 1-91 (93)
90 3ehr_A Osteoclast-stimulating 99.8 3.8E-20 1.3E-24 192.2 10.0 128 567-706 79-207 (222)
91 2aja_A Ankyrin repeat family p 99.8 3.5E-22 1.2E-26 227.2 -6.6 229 422-713 94-357 (376)
92 3aaa_C Myotrophin, protein V-1 99.8 1.3E-19 4.3E-24 171.1 11.1 113 563-682 9-121 (123)
93 2jab_A H10-2-G3; HER2, darpin, 99.8 1.8E-19 6.2E-24 173.3 12.2 112 591-713 10-121 (136)
94 1n0r_A 4ANK, 4 ankyrin repeats 99.8 3.9E-19 1.3E-23 166.0 13.4 109 594-713 1-109 (126)
95 2l6b_A NR1C; ankyrin, consensu 99.8 8.9E-20 3.1E-24 169.9 8.4 109 590-709 4-112 (115)
96 1dcq_A PYK2-associated protein 99.8 3.1E-18 1.1E-22 186.3 21.8 119 565-690 134-261 (278)
97 3c5r_A BARD-1, BRCA1-associate 99.8 8E-20 2.7E-24 175.5 7.0 108 577-690 25-132 (137)
98 3lvq_E ARF-GAP with SH3 domain 99.8 5.8E-19 2E-23 207.1 15.1 132 564-707 135-275 (497)
99 2b0o_E UPLC1; arfgap, structur 99.8 4.5E-19 1.5E-23 195.2 12.8 131 565-713 155-294 (301)
100 3ehr_A Osteoclast-stimulating 99.8 2.7E-19 9.2E-24 185.8 10.2 112 591-713 69-181 (222)
101 3deo_A Signal recognition part 99.8 3.4E-19 1.2E-23 180.2 10.4 112 592-715 41-153 (183)
102 3deo_A Signal recognition part 99.8 1.3E-18 4.3E-23 176.1 14.1 109 562-678 45-154 (183)
103 2b0o_E UPLC1; arfgap, structur 99.8 2.8E-19 9.6E-24 196.8 9.7 92 577-680 208-299 (301)
104 3ui2_A Signal recognition part 99.8 1.7E-18 5.7E-23 184.0 13.8 121 562-690 46-183 (244)
105 3jue_A Arfgap with coiled-coil 99.8 1.4E-18 4.8E-23 197.0 13.9 139 562-709 200-341 (368)
106 2aja_A Ankyrin repeat family p 99.8 2.1E-20 7.2E-25 212.5 -2.5 183 422-703 67-256 (376)
107 3ui2_A Signal recognition part 99.8 9.5E-19 3.2E-23 185.9 9.9 111 592-714 42-153 (244)
108 3lvq_E ARF-GAP with SH3 domain 99.8 2.3E-18 7.9E-23 202.0 13.0 80 577-656 189-268 (497)
109 2zgd_A 3 repeat synthetic anky 99.7 4.4E-17 1.5E-21 151.6 10.3 93 588-686 17-109 (110)
110 1n0q_A 3ANK, 3 ankyrin repeats 99.7 2.8E-16 9.6E-21 141.1 11.2 88 565-653 6-93 (93)
111 3jue_A Arfgap with coiled-coil 99.6 4E-16 1.4E-20 176.9 11.7 112 591-713 195-309 (368)
112 1dcq_A PYK2-associated protein 99.6 1.9E-15 6.6E-20 164.2 13.8 120 595-725 130-263 (278)
113 2l6b_A NR1C; ankyrin, consensu 99.6 3.8E-16 1.3E-20 145.2 5.7 89 577-671 24-112 (115)
114 2zgd_A 3 repeat synthetic anky 99.5 2E-13 7E-18 126.7 11.3 84 563-647 26-109 (110)
115 2dfs_A Myosin-5A; myosin-V, in 99.4 1.4E-13 4.8E-18 174.2 9.4 142 750-938 769-917 (1080)
116 2dfs_A Myosin-5A; myosin-V, in 99.3 2.2E-12 7.7E-17 163.3 11.2 122 799-938 764-894 (1080)
117 2cxk_A Camta1, calmodulin bind 99.2 1.4E-13 4.9E-18 126.4 -9.2 87 388-480 5-91 (95)
118 2ix7_C Myosin-5A; contractIle 98.9 2E-09 7E-14 89.7 8.1 49 800-848 2-50 (58)
119 1n2d_C IQ2 and IQ3 motifs from 98.7 3.3E-08 1.1E-12 79.1 6.4 43 803-845 3-47 (48)
120 2ix7_C Myosin-5A; contractIle 98.5 3.7E-07 1.3E-11 76.0 7.8 51 824-933 3-53 (58)
121 1n2d_C IQ2 and IQ3 motifs from 98.3 6.7E-07 2.3E-11 71.4 5.8 22 825-846 2-23 (48)
122 1wdc_A Scallop myosin; calcium 97.3 0.00045 1.5E-08 58.5 7.4 48 798-845 1-51 (64)
123 2bl0_A Major plasmodial myosin 97.1 0.00076 2.6E-08 56.9 5.8 45 801-845 2-49 (63)
124 1kk8_A Myosin heavy chain, str 97.1 0.0004 1.4E-08 86.0 5.8 48 799-846 775-825 (837)
125 1i84_S Smooth muscle myosin he 96.9 0.0024 8.1E-08 82.5 11.0 46 801-846 790-838 (1184)
126 2bl0_A Major plasmodial myosin 96.7 0.0027 9.2E-08 53.5 6.3 43 824-866 2-47 (63)
127 1wdc_A Scallop myosin; calcium 96.7 0.0033 1.1E-07 53.1 6.8 42 824-865 4-48 (64)
128 1kk8_A Myosin heavy chain, str 96.5 0.0039 1.3E-07 77.2 8.5 56 822-933 775-830 (837)
129 3gn4_A Myosin-VI; unconvention 95.6 0.2 6.7E-06 49.1 13.9 33 826-858 45-77 (148)
130 1i84_S Smooth muscle myosin he 94.8 0.043 1.5E-06 70.9 8.7 46 821-866 787-835 (1184)
131 4anj_A Unconventional myosin-V 94.0 0.065 2.2E-06 67.9 7.5 47 799-846 771-817 (1052)
132 3gn4_A Myosin-VI; unconvention 87.2 2.5 8.5E-05 41.4 9.4 26 909-934 46-71 (148)
133 1w7j_A Myosin VA; motor protei 86.6 0.52 1.8E-05 58.1 5.3 30 823-852 765-794 (795)
134 2l53_B CAM, voltage-gated sodi 82.0 1.1 3.7E-05 32.4 3.1 19 803-821 6-24 (31)
135 2kxw_B Sodium channel protein 80.6 1.1 3.9E-05 31.3 2.7 17 803-819 6-22 (27)
136 1w7j_A Myosin VA; motor protei 80.5 0.65 2.2E-05 57.3 2.6 31 799-829 764-794 (795)
137 4anj_A Unconventional myosin-V 80.1 1.5 5E-05 55.7 5.6 36 825-861 774-809 (1052)
138 2l53_B CAM, voltage-gated sodi 79.3 1.2 4.1E-05 32.2 2.6 19 827-845 7-25 (31)
139 2kxw_B Sodium channel protein 77.7 1.2 4E-05 31.2 2.0 18 827-844 7-24 (27)
140 2ycu_A Non muscle myosin 2C, a 74.9 2.1 7.1E-05 54.3 4.8 44 806-849 767-810 (995)
141 3muj_A Transcription factor CO 54.3 0.58 2E-05 45.0 -4.5 62 390-458 6-68 (138)
142 2uzx_B Hepatocyte growth facto 36.8 7.3 0.00025 47.7 -0.0 72 389-465 635-707 (727)
143 4dck_A Sodium channel protein 35.4 25 0.00086 35.1 3.6 18 804-821 131-148 (168)
144 3mlp_A Transcription factor CO 31.5 3.2 0.00011 45.6 -3.8 63 389-458 231-294 (402)
145 4dck_A Sodium channel protein 29.7 33 0.0011 34.2 3.4 21 827-847 131-151 (168)
146 2f3y_B Voltage-dependent L-typ 23.1 49 0.0017 22.7 2.2 17 806-822 5-21 (26)
147 3dvk_B Voltage-dependent R-typ 22.3 35 0.0012 23.0 1.3 17 804-820 7-23 (23)
No 1
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=3.7e-34 Score=305.28 Aligned_cols=255 Identities=13% Similarity=0.028 Sum_probs=188.5
Q ss_pred ccccccchhHHHhcCCchHHHHHHHCCCCcC-CCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCch
Q 002053 417 SQQEAENCKWSCMFGEIEVPAEIVAGGVLRC-HTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDIT 495 (974)
Q Consensus 417 ~~~~~t~l~~Ac~fG~ieVV~~LL~~Ga~i~-~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~Tp 495 (974)
+..+.||+++||..|+.++|++||+.|++.+ ....+..|+||||+||..|+ .+++ ++|+++|++++.+|..|.||
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~--~~~v--~~Ll~~ga~~~~~~~~g~tp 81 (282)
T 1oy3_D 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGE--ASTV--EKLYAAGAGVLVAERGGHTA 81 (282)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTC--HHHH--HHHHHTTCCSSCCCTTSCCH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCC--HHHH--HHHHHcCCCCCCCCCCCCCH
Confidence 3445689999999999999999999998732 12668899999999999999 8888 99999999999999999999
Q ss_pred hh----hhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHH
Q 002053 496 SE----NLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKE 571 (974)
Q Consensus 496 L~----~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~ 571 (974)
|| .++.+++++|+..+............. ..... .......++ ......
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~------~~~~~--~~~~~~~~~-------------------~~~~~~ 134 (282)
T 1oy3_D 82 LHLACRVRAHTCACVLLQPRPSHPRDASDTYLT------QSQDC--TPDTSHAPA-------------------AVDSQP 134 (282)
T ss_dssp HHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------------------------
T ss_pred HHHHHHcCCcchhHhhhccCCCCchhhHHHHhh------ccccc--Ccchhcchh-------------------hhcccc
Confidence 99 578999999987655433222110000 00000 000111111 111111
Q ss_pred hhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCC-CCcHHHHHHHcCCHHHHHHHHHc
Q 002053 572 KLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVN-GWTALHWAAYCGRERTVASLIAL 650 (974)
Q Consensus 572 ~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~-G~TpLH~Aa~~G~~eiV~lLL~~ 650 (974)
.....+...+...+++++.+|..|.||||+||..|+.++|++|+++|++++.++.. |+||||+||..|+.++|++|+++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ 214 (282)
T 1oy3_D 135 NPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKA 214 (282)
T ss_dssp ---------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred ccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHc
Confidence 12222455566778899999999999999999999999999999999999999865 99999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHHhhh
Q 002053 651 GAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGA 713 (974)
Q Consensus 651 GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~a~ 713 (974)
|++++. +|..|+||||+|+..|+.+++++|+++| ++++.+|..|.||+..+.
T Consensus 215 gad~~~------~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~tpl~~a~ 266 (282)
T 1oy3_D 215 GADPTA------RMYGGRTPLGSALLRPNPILARLLRAHG-----APEPEDGGDKLSPCSSSG 266 (282)
T ss_dssp TCCTTC------CCTTSCCHHHHHHTSSCHHHHHHHHHTT-----CCCCCCC-----------
T ss_pred CCCCcc------cccCCCCHHHHHHHcCCcHHHHHHHHcC-----CCcCcCCCcccccccccC
Confidence 999887 6689999999999999999999999988 999999999999987664
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=8.8e-33 Score=315.69 Aligned_cols=291 Identities=15% Similarity=0.102 Sum_probs=202.9
Q ss_pred cccchhHHHhcCCchHHHHHHHCCCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchhh--
Q 002053 420 EAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSE-- 497 (974)
Q Consensus 420 ~~t~l~~Ac~fG~ieVV~~LL~~Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL~-- 497 (974)
..|++++||..|+.+++++|+++|++++ ..+..|.||||+||..|+ .+++ ++|+++|++++..|..|.||++
T Consensus 47 ~~t~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~g~--~~~v--~~Ll~~ga~~~~~~~~g~t~L~~A 120 (437)
T 1n11_A 47 VETPLHMAARAGHTEVAKYLLQNKAKVN--AKAKDDQTPLHCAARIGH--TNMV--KLLLENNANPNLATTAGHTPLHIA 120 (437)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCSS--CCCTTSCCHHHHHHHHTC--HHHH--HHHHHHTCCTTCCCTTCCCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCCC--CCCCCCCCHHHHHHHCCC--HHHH--HHHHhCCCCCCCCCCCCCcHHHHH
Confidence 3466777777777777777777777666 556667777777777776 6666 7777777777777777777776
Q ss_pred --hhHHHHHHHHhhcCCCCCCCCCCChhhhHHh-----HHHHhhhhc-------cCCCchhHHHHHhhhcCCChH-----
Q 002053 498 --NLRMQFGKLLCLTSVSTPNYDPSNLSDISQL-----NSKISSLLK-------DENDDWDLMLKLTAEEKFSSE----- 558 (974)
Q Consensus 498 --~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l-----~~~l~~Ll~-------~~~~~~t~L~~~~~~~~~s~~----- 558 (974)
.++.+++++|+..+.........+.+++... ...+..++. .+..++++|+.++..+.....
T Consensus 121 ~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 200 (437)
T 1n11_A 121 AREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLP 200 (437)
T ss_dssp HHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGG
T ss_pred HHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 3556666666654443333332232222211 112222221 123455666555443221110
Q ss_pred ---------HHHHHHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCC
Q 002053 559 ---------EVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGW 629 (974)
Q Consensus 559 ---------~~~~~lL~~a~~~~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~ 629 (974)
....+.++.++..+..+ +++.|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+
T Consensus 201 ~g~~~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~ 279 (437)
T 1n11_A 201 RGGSPHSPAWNGYTPLHIAAKQNQVE-VARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGL 279 (437)
T ss_dssp GTCCSCCCCTTCCCHHHHHHHTTCHH-HHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCC
T ss_pred CCCCCCCcCCCCCCHHHHHHHcCCHH-HHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCC
Confidence 01123566666665554 78888888888888888899999999999999999999999999888888899
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHH
Q 002053 630 TALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAE 709 (974)
Q Consensus 630 TpLH~Aa~~G~~eiV~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l 709 (974)
||||+|+..|+.+++++|+++|++++. +|..|+||||+|+..|+.++|++|+++| ++++.+|..|+||+
T Consensus 280 t~L~~A~~~~~~~~~~~Ll~~g~~~~~------~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----ad~n~~~~~g~t~L 348 (437)
T 1n11_A 280 TPLHLVAQEGHVPVADVLIKHGVMVDA------TTRMGYTPLHVASHYGNIKLVKFLLQHQ-----ADVNAKTKLGYSPL 348 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCTTC------CCSSCCCHHHHHHHSSCSHHHHHHHHTT-----CCTTCCCTTSCCHH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCccCCC------CCCCCCCHHHHHHHcCcHHHHHHHHhcC-----CCCCCCCCCCCCHH
Confidence 999999999999999999998888876 5688999999999999999999999988 89999999999999
Q ss_pred Hhhh-----hhhhcccccCCCCCC
Q 002053 710 VTGA-----TAVQTVPQRCPTPVS 728 (974)
Q Consensus 710 ~~a~-----~~~~~l~er~a~~~~ 728 (974)
..|. ..++.+++.++.+..
T Consensus 349 ~~A~~~g~~~iv~~Ll~~ga~~~~ 372 (437)
T 1n11_A 349 HQAAQQGHTDIVTLLLKNGASPNE 372 (437)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred HHHHHCChHHHHHHHHHCcCCCCC
Confidence 7665 456677777765443
No 3
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.8e-32 Score=313.10 Aligned_cols=276 Identities=14% Similarity=0.111 Sum_probs=194.6
Q ss_pred cccchhHHHhcCCchHHHHHHHCCCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchhh--
Q 002053 420 EAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSE-- 497 (974)
Q Consensus 420 ~~t~l~~Ac~fG~ieVV~~LL~~Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL~-- 497 (974)
..||+++||..|+.++|++|+++|++++ ..+..|.||||+||.+|+ .+++ ++|+..+++++..+..|.||++
T Consensus 80 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~--~~~~~g~t~L~~A~~~g~--~~~v--~~Ll~~~~~~~~~~~~g~t~L~~A 153 (437)
T 1n11_A 80 DQTPLHCAARIGHTNMVKLLLENNANPN--LATTAGHTPLHIAAREGH--VETV--LALLEKEASQACMTKKGFTPLHVA 153 (437)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHHTCCTT--CCCTTCCCHHHHHHHHTC--HHHH--HHHHHTTCCSCCCCTTSCCHHHHH
T ss_pred CCCHHHHHHHCCCHHHHHHHHhCCCCCC--CCCCCCCcHHHHHHHcCC--HHHH--HHHHhCCCCCcCCCCCCCCHHHHH
Confidence 3456666666666666666666666555 445556666666666665 5555 5666666666665566666665
Q ss_pred --hhHHHHHHHHhhcCCCCCCCCCCChhhhHHhH-----HHHhhhhcc-------CCCchhHHHHHhhhcCCCh------
Q 002053 498 --NLRMQFGKLLCLTSVSTPNYDPSNLSDISQLN-----SKISSLLKD-------ENDDWDLMLKLTAEEKFSS------ 557 (974)
Q Consensus 498 --~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~-----~~l~~Ll~~-------~~~~~t~L~~~~~~~~~s~------ 557 (974)
.++.+++++|+..+.........+.+++...+ ..+..++.. +..++++|+.++..+....
T Consensus 154 ~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 233 (437)
T 1n11_A 154 AKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQ 233 (437)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 34555565555444333333222222221111 112222111 1234445544433221110
Q ss_pred --------HHHHHHHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCC
Q 002053 558 --------EEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGW 629 (974)
Q Consensus 558 --------~~~~~~lL~~a~~~~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~ 629 (974)
.....+.++.++..+..+ ++++|++.|++++..|..|.||||+|+..|+.+++++|+++|+++|.+|..|+
T Consensus 234 ~g~~~~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~ 312 (437)
T 1n11_A 234 YGGSANAESVQGVTPLHLAAQEGHAE-MVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGY 312 (437)
T ss_dssp TTCCTTCCCTTCCCHHHHHHHTTCHH-HHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCC
T ss_pred cCCCCCCCCCCCCCHHHHHHHCCCHH-HHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCC
Confidence 011224566677666655 89999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHH
Q 002053 630 TALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAE 709 (974)
Q Consensus 630 TpLH~Aa~~G~~eiV~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l 709 (974)
||||+|+..|+.++|++|+++|+++|. +|..|+||||+|+..|+.++|++|+++| ++++.+|.+|.||+
T Consensus 313 t~L~~A~~~g~~~~v~~Ll~~gad~n~------~~~~g~t~L~~A~~~g~~~iv~~Ll~~g-----a~~~~~~~~g~t~l 381 (437)
T 1n11_A 313 TPLHVASHYGNIKLVKFLLQHQADVNA------KTKLGYSPLHQAAQQGHTDIVTLLLKNG-----ASPNEVSSDGTTPL 381 (437)
T ss_dssp CHHHHHHHSSCSHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCSCCCCSSSCCHH
T ss_pred CHHHHHHHcCcHHHHHHHHhcCCCCCC------CCCCCCCHHHHHHHCChHHHHHHHHHCc-----CCCCCCCCCCCCHH
Confidence 999999999999999999999999887 6689999999999999999999999988 99999999999999
Q ss_pred Hhhh
Q 002053 710 VTGA 713 (974)
Q Consensus 710 ~~a~ 713 (974)
..+.
T Consensus 382 ~~A~ 385 (437)
T 1n11_A 382 AIAK 385 (437)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7664
No 4
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.7e-32 Score=291.32 Aligned_cols=251 Identities=18% Similarity=0.142 Sum_probs=205.0
Q ss_pred cccchhHHHhcCCchHHHHHHHCCCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchhh--
Q 002053 420 EAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSE-- 497 (974)
Q Consensus 420 ~~t~l~~Ac~fG~ieVV~~LL~~Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL~-- 497 (974)
+.+++++||..|+++++++|++.|++++. ..+..|+||||+||..|+ .+++ ++|++.|++++..|..|.||+|
T Consensus 5 g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~~g~t~L~~A~~~g~--~~~v--~~Ll~~g~~~~~~~~~g~t~L~~A 79 (285)
T 1wdy_A 5 DNHLLIKAVQNEDVDLVQQLLEGGANVNF-QEEEGGWTPLHNAVQMSR--EDIV--ELLLRHGADPVLRKKNGATPFLLA 79 (285)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTTCCCHHHHHHHTTC--HHHH--HHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCccc-ccCCCCCcHHHHHHHcCC--HHHH--HHHHHcCCCCcccCCCCCCHHHHH
Confidence 34789999999999999999999998873 226789999999999999 8888 9999999999999999999999
Q ss_pred --hhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHH
Q 002053 498 --NLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQV 575 (974)
Q Consensus 498 --~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~ 575 (974)
.++.+++++|+..+......+ ..++++|+.++..+. .+
T Consensus 80 ~~~~~~~~v~~Ll~~g~~~~~~~---------------------~~g~t~L~~A~~~~~-------------------~~ 119 (285)
T 1wdy_A 80 AIAGSVKLLKLFLSKGADVNECD---------------------FYGFTAFMEAAVYGK-------------------VK 119 (285)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCBC---------------------TTCCBHHHHHHHTTC-------------------HH
T ss_pred HHcCCHHHHHHHHHcCCCCCccC---------------------cccCCHHHHHHHhCC-------------------HH
Confidence 477899999887654432221 455666665543222 22
Q ss_pred HHHHHHHhCCCCCCcc----------cCCCCcHHHHHHHcCCHhHHHHHHhC-CCcccccCCCCCcHHHHHHHcCC----
Q 002053 576 WLVQKAAEGGKGPCVL----------DHCGQGVLHFAAALGYDWALEPTTVA-GVNINFRDVNGWTALHWAAYCGR---- 640 (974)
Q Consensus 576 ~lvk~LL~~Gad~n~~----------D~~G~TpLH~Aa~~G~~eiVklLL~~-GAdvn~~D~~G~TpLH~Aa~~G~---- 640 (974)
+++.|++.|++++.. +..|.||||+|+..|+.+++++|++. |++++.+|..|+||||+|+..++
T Consensus 120 -~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~ 198 (285)
T 1wdy_A 120 -ALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDV 198 (285)
T ss_dssp -HHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTH
T ss_pred -HHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchH
Confidence 788888899988887 77788999999999999999999986 89999999999999999999888
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHH-cCCCCcccCCcccCCCCCCHHHhhh-----h
Q 002053 641 ERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAE-SDLSSALSAISLNKKDGDVAEVTGA-----T 714 (974)
Q Consensus 641 ~eiV~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe-~Gl~~h~adln~~d~~G~T~l~~a~-----~ 714 (974)
.+++++|+++|++++. +|..|.||||+|+..|+.+++++|++ .| ++++.+|..|.||+..|. +
T Consensus 199 ~~i~~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g-----~~~~~~~~~g~t~l~~A~~~~~~~ 267 (285)
T 1wdy_A 199 EAITHLLLDHGADVNV------RGERGKTPLILAVEKKHLGLVQRLLEQEH-----IEINDTDSDGKTALLLAVELKLKK 267 (285)
T ss_dssp HHHHHHHHHTTCCSSC------CCTTSCCHHHHHHHTTCHHHHHHHHHSSS-----CCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHHcCCCCCC------cCCCCCcHHHHHHHcCCHHHHHHHHhccC-----CCccccCCCCCcHHHHHHHcCcHH
Confidence 8889999999988876 56789999999999999999999998 56 888899999999987664 4
Q ss_pred hhhcccccCCCCC
Q 002053 715 AVQTVPQRCPTPV 727 (974)
Q Consensus 715 ~~~~l~er~a~~~ 727 (974)
.++.++++++.+.
T Consensus 268 i~~~Ll~~Ga~~~ 280 (285)
T 1wdy_A 268 IAELLCKRGASTD 280 (285)
T ss_dssp HHHHHHHHSSCSC
T ss_pred HHHHHHHcCCCCC
Confidence 5566667666543
No 5
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=4.1e-32 Score=297.68 Aligned_cols=267 Identities=20% Similarity=0.126 Sum_probs=211.6
Q ss_pred cccccchhHHHhcCCchHHHHHHHCCCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchhh
Q 002053 418 QQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSE 497 (974)
Q Consensus 418 ~~~~t~l~~Ac~fG~ieVV~~LL~~Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL~ 497 (974)
..+.|++++||..|+.++|++|++.|++++ ..+..|+||||+||.+|+ .+++ ++|+++|++++..|..|.|||+
T Consensus 56 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~g~--~~iv--~~Ll~~g~~~~~~~~~g~t~L~ 129 (351)
T 3utm_A 56 GRKSTPLHLAAGYNRVRIVQLLLQHGADVH--AKDKGGLVPLHNACSYGH--YEVT--ELLLKHGACVNAMDLWQFTPLH 129 (351)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTT--CCCTTCCCHHHHHHHTTC--HHHH--HHHHHTTCCTTCCCTTCCCHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCC--ccCCCCCcHHHHHHHCCC--HHHH--HHHHHCCCCCCCCCCCCCCHHH
Confidence 335689999999999999999999999988 678899999999999999 8888 9999999999999999999999
Q ss_pred ----hhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhh
Q 002053 498 ----NLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKL 573 (974)
Q Consensus 498 ----~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l 573 (974)
.++.+++++|+..+.........+........ ..+....... ......+..++....
T Consensus 130 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~----------~~~~~~~~~~---------~~~~~~~~~~~~~~~ 190 (351)
T 3utm_A 130 EAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAP----------TPELRERLTY---------EFKGHSLLQAAREAD 190 (351)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCS----------SHHHHHHHHH---------HHHHHHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHh----------hhhhHHHHHh---------hhcccHHHHHHHhcc
Confidence 47789999988776655444333322221110 0000001100 011122233333333
Q ss_pred HHHHHHHHHhCCCCCCcccCCCCcHHHHHHHc---CCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 002053 574 QVWLVQKAAEGGKGPCVLDHCGQGVLHFAAAL---GYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIAL 650 (974)
Q Consensus 574 ~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~---G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~ 650 (974)
.. .+..++..+......+..|.||||+|+.. +..+++++|+++|+++|.+|..|+||||+|+..|+.++|++|+++
T Consensus 191 ~~-~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 269 (351)
T 3utm_A 191 LA-KVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKH 269 (351)
T ss_dssp HH-HHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HH-HHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 33 45556666655556788899999999999 558999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHHhhhhhhhcccc
Q 002053 651 GAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGATAVQTVPQ 721 (974)
Q Consensus 651 GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~a~~~~~~l~e 721 (974)
|++++. +|..|+||||+|+..|+.+++++|+++| ++++++|..|.||+..+...+..++.
T Consensus 270 ga~~n~------~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-----ad~~~~~~~g~tal~~a~~~~~~~l~ 329 (351)
T 3utm_A 270 GAKMNA------LDSLGQTALHRAALAGHLQTCRLLLSYG-----SDPSIISLQGFTAAQMGNEAVQQILS 329 (351)
T ss_dssp TCCTTC------CCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHSCHHHHHHHH
T ss_pred CCCCCC------cCCCCCCHHHHHHHcCcHHHHHHHHHcC-----CCCCCcCCCCCChhhhhhHHHHHHHH
Confidence 999887 6689999999999999999999999998 99999999999999888766655544
No 6
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.1e-32 Score=294.65 Aligned_cols=235 Identities=14% Similarity=0.021 Sum_probs=198.3
Q ss_pred ccchhHHHhcCCchHHHHHHHCCCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchhh---
Q 002053 421 AENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSE--- 497 (974)
Q Consensus 421 ~t~l~~Ac~fG~ieVV~~LL~~Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL~--- 497 (974)
.|++++||..|+.+++++|++.|++++ ..+..|.||||+||.+|+ .+++ ++|+++|+++|..|..|.||+|
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~g~--~~~v--~~Ll~~g~~~~~~~~~g~t~L~~A~ 77 (261)
T 2xai_A 4 WSPMHEAAIHGHQLSLRNLISQGWAVN--IITADHVSPLHEACLGGH--LSCV--KILLKHGAQVNGVTADWHTPLFNAC 77 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSS--CCCTTCCCHHHHHHHHTC--HHHH--HHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCC--CcCCCCCCHHHHHHHcCC--HHHH--HHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 489999999999999999999999988 778899999999999999 8888 9999999999999999999999
Q ss_pred -hhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHH
Q 002053 498 -NLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVW 576 (974)
Q Consensus 498 -~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~ 576 (974)
.++.+++++|+..+...... .+++++++.++.. +..+
T Consensus 78 ~~~~~~~v~~Ll~~g~~~~~~----------------------~~g~t~L~~A~~~-------------------~~~~- 115 (261)
T 2xai_A 78 VSGSWDCVNLLLQHGASVQPE----------------------SDLASPIHEAARR-------------------GHVE- 115 (261)
T ss_dssp HHTCHHHHHHHHHTTCCSSCS----------------------CTTCCHHHHHHHT-------------------TCHH-
T ss_pred HcCCHHHHHHHHHCCCCCCCC----------------------CCCCCHHHHHHHc-------------------CcHH-
Confidence 47788999988765543321 2355666544432 2222
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 002053 577 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA 656 (974)
Q Consensus 577 lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~ 656 (974)
+++.|++.|++++.+|..|.||||+|+..|+.+++++|+++|+++|. +..|+||||+|+..|+.++|++|+++|++++.
T Consensus 116 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~ 194 (261)
T 2xai_A 116 CVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQA 194 (261)
T ss_dssp HHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 78899999999999999999999999999999999999999999995 88899999999999999999999999999877
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC---cccCCcccCCCCCCHHHhh
Q 002053 657 LSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSS---ALSAISLNKKDGDVAEVTG 712 (974)
Q Consensus 657 ~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~---h~adln~~d~~G~T~l~~a 712 (974)
+|..|+||||+|+.++ +++++|++++... +.++++++|..|.|++..+
T Consensus 195 ------~d~~g~tpl~~A~~~~--~~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~ 245 (261)
T 2xai_A 195 ------KNAEGKRPVELVPPES--PLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKI 245 (261)
T ss_dssp ------CCTTSCCGGGGSCTTC--THHHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGG
T ss_pred ------cCCCCCChhhhccccc--cHHHHHHhccCCccHHHHHHHHHHHHhchhccccC
Confidence 6789999999999665 4899999877322 2256778899999987654
No 7
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.2e-31 Score=284.72 Aligned_cols=236 Identities=14% Similarity=0.071 Sum_probs=200.6
Q ss_pred cccchhHHHhcCCchHHHHHHHCCCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchhh--
Q 002053 420 EAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSE-- 497 (974)
Q Consensus 420 ~~t~l~~Ac~fG~ieVV~~LL~~Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL~-- 497 (974)
+.|++++||..|+.+++++|++.|++++ ..+..|.||||+||..|+ .+++ ++|+++|++++..|..|.||++
T Consensus 39 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~--~~~v--~~Ll~~g~~~~~~~~~g~t~L~~A 112 (285)
T 1wdy_A 39 GWTPLHNAVQMSREDIVELLLRHGADPV--LRKKNGATPFLLAAIAGS--VKLL--KLFLSKGADVNECDFYGFTAFMEA 112 (285)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTT--CCCTTCCCHHHHHHHHTC--HHHH--HHHHHTTCCTTCBCTTCCBHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCc--ccCCCCCCHHHHHHHcCC--HHHH--HHHHHcCCCCCccCcccCCHHHHH
Confidence 4589999999999999999999999888 678899999999999999 8887 9999999999999999999999
Q ss_pred --hhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHH
Q 002053 498 --NLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQV 575 (974)
Q Consensus 498 --~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~ 575 (974)
.++.+++++|+..+............ ....+..+.++|+.++. .+..+
T Consensus 113 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~~-----------~~~~~~~g~t~L~~A~~-------------------~~~~~ 162 (285)
T 1wdy_A 113 AVYGKVKALKFLYKRGANVNLRRKTKED-----------QERLRKGGATALMDAAE-------------------KGHVE 162 (285)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCCCCHH-----------HHHTTCCCCCHHHHHHH-------------------HTCHH
T ss_pred HHhCCHHHHHHHHHhCCCcccccccHHH-----------HHhhccCCCcHHHHHHH-------------------cCCHH
Confidence 47789999988765544332211100 00112345555554443 33333
Q ss_pred HHHHHHHhC-CCCCCcccCCCCcHHHHHHHcCC----HhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHH-
Q 002053 576 WLVQKAAEG-GKGPCVLDHCGQGVLHFAAALGY----DWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIA- 649 (974)
Q Consensus 576 ~lvk~LL~~-Gad~n~~D~~G~TpLH~Aa~~G~----~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~- 649 (974)
+++.|++. |++++.+|..|.||||+|+..|+ .+++++|+++|+++|.+|..|+||||+|+..|+.++|++|++
T Consensus 163 -~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 241 (285)
T 1wdy_A 163 -VLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQ 241 (285)
T ss_dssp -HHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHS
T ss_pred -HHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhc
Confidence 78888887 99999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCC
Q 002053 650 LGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKK 703 (974)
Q Consensus 650 ~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~ 703 (974)
.|++++. +|..|.||||+|+..|+.+++++|+++| ++++.+|.
T Consensus 242 ~g~~~~~------~~~~g~t~l~~A~~~~~~~i~~~Ll~~G-----a~~~~~d~ 284 (285)
T 1wdy_A 242 EHIEIND------TDSDGKTALLLAVELKLKKIAELLCKRG-----ASTDCGDL 284 (285)
T ss_dssp SSCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHHS-----SCSCCSSC
T ss_pred cCCCccc------cCCCCCcHHHHHHHcCcHHHHHHHHHcC-----CCCCcccc
Confidence 8999877 6689999999999999999999999999 99988873
No 8
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.98 E-value=1.4e-31 Score=295.56 Aligned_cols=272 Identities=14% Similarity=0.089 Sum_probs=187.1
Q ss_pred cccchhHHHhcCCchHHHHHHHCCCCcCCCCCC-CCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchhhh
Q 002053 420 EAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQ-KVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN 498 (974)
Q Consensus 420 ~~t~l~~Ac~fG~ieVV~~LL~~Ga~i~~~~~~-~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL~~ 498 (974)
..|+|++||..|++++|++||++|++++ ..+ ..|+||||+||.+|+ .+|+ ++|+++|++++.+|..+.++++.
T Consensus 25 ~~t~L~~Av~~g~~~~V~~LL~~Gadvn--~~~~~~g~TpLh~A~~~g~--~~iv--~~Ll~~ga~~~~~~~~~~~~~~~ 98 (337)
T 4g8k_A 25 DNHLLIKAVQNEDVDLVQQLLEGGANVN--FQEEEGGWTPLHNAVQMSR--EDIV--ELLLRHGADPVLRKKNGATPFIL 98 (337)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHTCCTT--CCCTTTCCCHHHHHHHTTC--HHHH--HHHHHTTCCTTCCCTTCCCHHHH
T ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCC--ccCCCCCcCHHHHHHHcCC--HHHH--HHHHHcCCchhhhccCCCchhHH
Confidence 3478999999999999999999999998 443 569999999999999 8888 99999999999999999998883
Q ss_pred ----hHHHHHHHHhhcCCCCCCCCCCChhhhHHhH-----HHHhhhhccCCCchhHHHHHhhhcCCCh---------HHH
Q 002053 499 ----LRMQFGKLLCLTSVSTPNYDPSNLSDISQLN-----SKISSLLKDENDDWDLMLKLTAEEKFSS---------EEV 560 (974)
Q Consensus 499 ----g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~-----~~l~~Ll~~~~~~~t~L~~~~~~~~~s~---------~~~ 560 (974)
....++.++..........+..+.+++.... ..+..++.. ........ ...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~-----------ga~~~~~~~~~~~~~~~~~~ 167 (337)
T 4g8k_A 99 AAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKR-----------GANVNLRRKTKEDQERLRKG 167 (337)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHT-----------TCCTTCCCCCC-----CTTC
T ss_pred HHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHc-----------CCCcchhhccccccccccCC
Confidence 3345555555444433333333333222111 111111110 00000000 000
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHh-CCCCCCcccCCCCcHHHHHHHcCC----HhHHHHHHhCCCcccccCCCCCcHHHHH
Q 002053 561 KEKLVQKLLKEKLQVWLVQKAAE-GGKGPCVLDHCGQGVLHFAAALGY----DWALEPTTVAGVNINFRDVNGWTALHWA 635 (974)
Q Consensus 561 ~~~lL~~a~~~~l~~~lvk~LL~-~Gad~n~~D~~G~TpLH~Aa~~G~----~eiVklLL~~GAdvn~~D~~G~TpLH~A 635 (974)
..+.|+.++..+..+ ++++|++ .|+++|.+|..|.|+||+++..+. ..++++|+++|+++|.+|..|+||||+|
T Consensus 168 g~T~L~~A~~~g~~~-~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a 246 (337)
T 4g8k_A 168 GATALMDAAEKGHVE-VLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILA 246 (337)
T ss_dssp SCCHHHHHHHHTCHH-HHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHH
T ss_pred CCcHHHHHHHCCCHH-HHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence 113455566555554 6777774 688888888888888887776554 3577888888888888888888888888
Q ss_pred HHcCCHHHHHHHHHc-CCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHHhhh-
Q 002053 636 AYCGRERTVASLIAL-GAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGA- 713 (974)
Q Consensus 636 a~~G~~eiV~lLL~~-GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~a~- 713 (974)
|..|+.++|++|+.. |++++. +|..|+||||+|+..|+.++|++||++| ++++.+ +|+..|.
T Consensus 247 ~~~~~~~~v~~Ll~~~~~~vn~------~d~~G~TpL~~A~~~g~~~iv~~Ll~~G-----Ad~n~~-----~~L~~A~~ 310 (337)
T 4g8k_A 247 VEKKHLGLVQRLLEQEHIEIND------TDSDGKTALLLAVELKLKKIAELLCKRG-----ASTDCG-----DLVMTARR 310 (337)
T ss_dssp HHTTCHHHHHHHHTSTTCCTTC------BCTTSCBHHHHHHHTTCHHHHHHHHTTS-----CSSTTC-----CHHHHHHH
T ss_pred HHhhhhHHHHHHHHhcCCcccC------cCCCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCCC-----CHHHHHHH
Confidence 888888888888875 677766 5578888888888888888888888877 776654 4765554
Q ss_pred ----hhhhcccccCCC
Q 002053 714 ----TAVQTVPQRCPT 725 (974)
Q Consensus 714 ----~~~~~l~er~a~ 725 (974)
..++.++++++.
T Consensus 311 ~~~~~iv~~Ll~~GA~ 326 (337)
T 4g8k_A 311 NYDHSLVKVLLSHGAK 326 (337)
T ss_dssp TTCHHHHHHHHHTTCC
T ss_pred cCCHHHHHHHHHCcCC
Confidence 345666666664
No 9
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.98 E-value=1.1e-31 Score=285.46 Aligned_cols=222 Identities=16% Similarity=0.119 Sum_probs=166.1
Q ss_pred ccccccchhHHHhcC-------------CchHHHHHHHCCCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCC
Q 002053 417 SQQEAENCKWSCMFG-------------EIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIP 483 (974)
Q Consensus 417 ~~~~~t~l~~Ac~fG-------------~ieVV~~LL~~Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GA 483 (974)
+..+.|||++||..| +.++++.|++.|++++. ..+..|+||||+||..|+ .+++ ++|+++|+
T Consensus 7 d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~-~~d~~g~t~L~~A~~~g~--~~~v--~~Ll~~g~ 81 (253)
T 1yyh_A 7 GPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHN-QTDRTGETALHLAARYSR--SDAA--KRLLEASA 81 (253)
T ss_dssp ----------------------------------------------CCCTTSCCHHHHHHHTTC--HHHH--HHHHHTTC
T ss_pred CCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCccc-ccCCCCCcHHHHHHHcCC--HHHH--HHHHHcCC
Confidence 344568999999988 89999999999998762 347889999999999999 8888 99999999
Q ss_pred CCccccCCCCchhh----hhHHHHHHHHhhcCC-CCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChH
Q 002053 484 DVDVADNCGDITSE----NLRMQFGKLLCLTSV-STPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSE 558 (974)
Q Consensus 484 dvna~D~~G~TpL~----~g~~~ivkLLl~g~~-~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~ 558 (974)
+++..|..|.|||| .++.+++++|+..+. ..... +..++++|+.++..+...
T Consensus 82 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~---------------------~~~g~t~L~~A~~~~~~~-- 138 (253)
T 1yyh_A 82 DANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDAR---------------------MHDGTTPLILAARLAVEG-- 138 (253)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCC---------------------CTTCCCHHHHHHHHTCSS--
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccc---------------------CCCCCcHHHHHHHcChHH--
Confidence 99999999999999 467889999887554 22211 145677777666544332
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHc
Q 002053 559 EVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYC 638 (974)
Q Consensus 559 ~~~~~lL~~a~~~~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~ 638 (974)
+++.|++.|+++|.+|..|.||||+||..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 139 ------------------~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~ 200 (253)
T 1yyh_A 139 ------------------MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAARE 200 (253)
T ss_dssp ------------------HHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ------------------HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHC
Confidence 78899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 002053 639 GRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 690 (974)
Q Consensus 639 G~~eiV~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~G 690 (974)
|+.++|++|+++|++++. +|..|+||||+|+.+|+.+|+++|....
T Consensus 201 ~~~~~v~~Ll~~ga~~~~------~d~~g~tpl~~A~~~g~~~i~~~l~~~~ 246 (253)
T 1yyh_A 201 GSYETAKVLLDHFANRDI------TDHMDRLPRDIAQERMHHDIVRLLDLEH 246 (253)
T ss_dssp TCHHHHHHHHHTTCCTTC------CCTTCCCHHHHHHHTTCHHHHHHHHC--
T ss_pred CCHHHHHHHHHcCCCccc------cccCCCCHHHHHHHcCCHHHHHHHHHHh
Confidence 999999999999999877 6689999999999999999999999654
No 10
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.97 E-value=2.4e-32 Score=305.01 Aligned_cols=237 Identities=12% Similarity=0.119 Sum_probs=191.2
Q ss_pred ccccccchhHHHhcCCchHHHHHHHCCCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchh
Q 002053 417 SQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITS 496 (974)
Q Consensus 417 ~~~~~t~l~~Ac~fG~ieVV~~LL~~Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL 496 (974)
+..+.|++++||..|++++|++||+.|++++ ..+..|+||||+||.+|+ .+++ ++|++.|++++. ..|.|||
T Consensus 17 d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~--~~d~~g~t~L~~A~~~g~--~~~v--~~Ll~~g~~~~~--~~g~t~L 88 (364)
T 3ljn_A 17 DDENMEKIHVAARKGQTDEVRRLIETGVSPT--IQNRFGCTALHLACKFGC--VDTA--KYLASVGEVHSL--WHGQKPI 88 (364)
T ss_dssp CHHHHHHHHHHHHHTCHHHHHHHHHTTCCTT--CCCTTCCCHHHHHHHHCC--HHHH--HHHHHHCCCCCC--BTTBCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc--ccCCCCCcHHHHHHHcCC--HHHH--HHHHHCCCCccc--cCCCCHH
Confidence 4456689999999999999999999999988 778899999999999999 8888 999999997665 5789999
Q ss_pred h----hhHHHHHHHHhhc----CCCCCCC-CCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHH
Q 002053 497 E----NLRMQFGKLLCLT----SVSTPNY-DPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQK 567 (974)
Q Consensus 497 ~----~g~~~ivkLLl~g----~~~~~~~-~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~ 567 (974)
+ .++.+++++|+.. +...... ........ ..+ .....+..++++|+.++..+..
T Consensus 89 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~g~t~L~~A~~~g~~------------ 151 (364)
T 3ljn_A 89 HLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREV----NEI-GSHVKHCKGQTALHWCVGLGPE------------ 151 (364)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCE----EEE-TTEEEEESCCCHHHHHHHSCGG------------
T ss_pred HHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhh----hhh-ccccCCCCCCCHHHHHHHcCCc------------
Confidence 9 5789999998865 2211000 00000000 000 0000123456666654432200
Q ss_pred HHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCc-----ccccCCCCCcHHHHHHHcCCHH
Q 002053 568 LLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVN-----INFRDVNGWTALHWAAYCGRER 642 (974)
Q Consensus 568 a~~~~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAd-----vn~~D~~G~TpLH~Aa~~G~~e 642 (974)
..+ ++++|++.|+++|.+|..|.||||+||..|+.++|++|+++|++ +|.+|..|+||||+||..|+.+
T Consensus 152 -----~~~-~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~ 225 (364)
T 3ljn_A 152 -----YLE-MIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWED 225 (364)
T ss_dssp -----GHH-HHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHH
T ss_pred -----hHH-HHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHH
Confidence 222 89999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 002053 643 TVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 690 (974)
Q Consensus 643 iV~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~G 690 (974)
+|++|+++|++++. +|..|.||||+|+..|+.+++++|+++|
T Consensus 226 ~v~~Ll~~gad~~~------~d~~g~tpL~~A~~~g~~~~v~~Ll~~~ 267 (364)
T 3ljn_A 226 VAMRFVEMGIDVNM------EDNEHTVPLYLSVRAAMVLLTKELLQKT 267 (364)
T ss_dssp HHHHHHTTTCCTTC------CCTTSCCHHHHHHHTCCHHHHHHHHHHS
T ss_pred HHHHHHHcCCCCCC------CCCCCCCHHHHHHHhChHHHHHHHHHcC
Confidence 99999999999887 6689999999999999999999999988
No 11
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.97 E-value=6.9e-31 Score=274.19 Aligned_cols=209 Identities=20% Similarity=0.189 Sum_probs=186.0
Q ss_pred cccccchhHHHhcCCchHHHHHHHCCCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchhh
Q 002053 418 QQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSE 497 (974)
Q Consensus 418 ~~~~t~l~~Ac~fG~ieVV~~LL~~Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL~ 497 (974)
..+.|++++||..|+.+++++|++.|++++ ..+..|.||||+||.+|+ .+++ ++|++.|++++..|..|.||++
T Consensus 9 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~--~~~v--~~Ll~~g~~~~~~~~~g~t~L~ 82 (237)
T 3b7b_A 9 QNKRSPLHAAAEAGHVDICHMLVQAGANID--TCSEDQRTPLMEAAENNH--LEAV--KYLIKAGALVDPKDAEGSTCLH 82 (237)
T ss_dssp CCSCCHHHHHHHHTCHHHHHHHHHTTCCTT--CCCTTCCCHHHHHHHTTC--HHHH--HHHHTTTCCCCCCCTTSCCHHH
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHHcCCCcC--ccCCCCCCHHHHHHHhCC--HHHH--HHHHhCCCCCCCCCCCCCcHHH
Confidence 345689999999999999999999999888 677889999999999998 8887 9999999999999988898887
Q ss_pred hhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHH
Q 002053 498 NLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWL 577 (974)
Q Consensus 498 ~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~l 577 (974)
... . .+.. .+
T Consensus 83 ~A~--------------------------------------------------~-------------------~~~~-~~ 92 (237)
T 3b7b_A 83 LAA--------------------------------------------------K-------------------KGHY-EV 92 (237)
T ss_dssp HHH--------------------------------------------------H-------------------TTCH-HH
T ss_pred HHH--------------------------------------------------H-------------------cCCH-HH
Confidence 310 0 0000 16
Q ss_pred HHHHHhCC-CCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 002053 578 VQKAAEGG-KGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA 656 (974)
Q Consensus 578 vk~LL~~G-ad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~ 656 (974)
++.|++.| ++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.
T Consensus 93 ~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 172 (237)
T 3b7b_A 93 VQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHA 172 (237)
T ss_dssp HHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTC
T ss_pred HHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC
Confidence 77888888 89999999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHHhhh
Q 002053 657 LSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGA 713 (974)
Q Consensus 657 ~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~a~ 713 (974)
+|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+..+.
T Consensus 173 ------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----ad~~~~d~~g~t~l~~A~ 218 (237)
T 3b7b_A 173 ------VNIHGDSPLHIAARENRYDCVVLFLSRD-----SDVTLKNKEGETPLQCAS 218 (237)
T ss_dssp ------CCTTCCCHHHHHHHTTCHHHHHHHHTTT-----CCTTCCCTTSCCHHHHSC
T ss_pred ------cCCCCCCHHHHHHHhCCHhHHHHHHHcC-----CCCCccCCCCCCHHHHHH
Confidence 5689999999999999999999999988 999999999999998773
No 12
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.97 E-value=6e-31 Score=274.46 Aligned_cols=205 Identities=17% Similarity=0.132 Sum_probs=175.0
Q ss_pred cccccchhHHHhcCCchHHHHHHH----CCCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCC
Q 002053 418 QQEAENCKWSCMFGEIEVPAEIVA----GGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGD 493 (974)
Q Consensus 418 ~~~~t~l~~Ac~fG~ieVV~~LL~----~Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~ 493 (974)
..+.|++++||..|+++++++|++ .|++++ ..+..|+||||+||..|+ .+++ ++|++.|++++..|..|.
T Consensus 7 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~--~~~~~g~t~L~~A~~~~~--~~~v--~~Ll~~g~~~~~~~~~g~ 80 (241)
T 1k1a_A 7 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELD--IYNNLRQTPLHLAVITTL--PSVV--RLLVTAGASPMALDRHGQ 80 (241)
T ss_dssp CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSC--CCCTTSCCHHHHHHHTTC--HHHH--HHHHHTTCCTTCCCTTSC
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCC--cccccCCCHHHHHHHcCC--HHHH--HHHHHcCCCccccCCCCC
Confidence 345689999999999999999997 898888 778889999999999999 8887 999999999999999999
Q ss_pred chhhhh----HHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHH
Q 002053 494 ITSENL----RMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLL 569 (974)
Q Consensus 494 TpL~~g----~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~ 569 (974)
||++.. +.+
T Consensus 81 t~l~~A~~~~~~~------------------------------------------------------------------- 93 (241)
T 1k1a_A 81 TAAHLACEHRSPT------------------------------------------------------------------- 93 (241)
T ss_dssp CHHHHHHHTTCHH-------------------------------------------------------------------
T ss_pred CHHHHHHHcCCHH-------------------------------------------------------------------
Confidence 998831 111
Q ss_pred HHhhHHHHHHHHHhCCC----CCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccC-CCCCcHHHHHHHcCCHHHH
Q 002053 570 KEKLQVWLVQKAAEGGK----GPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRD-VNGWTALHWAAYCGRERTV 644 (974)
Q Consensus 570 ~~~l~~~lvk~LL~~Ga----d~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D-~~G~TpLH~Aa~~G~~eiV 644 (974)
+++.|++.|+ +++..|..|.||||+|+..|+.+++++|+++|++++.++ ..|+||||+|+..|+.+++
T Consensus 94 -------~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v 166 (241)
T 1k1a_A 94 -------CLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMV 166 (241)
T ss_dssp -------HHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHH
T ss_pred -------HHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHH
Confidence 4555556555 788888889999999999999999999999999998888 7889999999999999999
Q ss_pred HHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHHhhh
Q 002053 645 ASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGA 713 (974)
Q Consensus 645 ~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~a~ 713 (974)
++|+++|++++. +|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+..|.
T Consensus 167 ~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~tpl~~A~ 224 (241)
T 1k1a_A 167 QLLLQHGANVNA------QMYSGSSALHSASGRGLLPLVRTLVRSG-----ADSSLKNCHNDTPLMVAR 224 (241)
T ss_dssp HHHHHTTCCTTC------BCTTSCBHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCTTTTCS
T ss_pred HHHHHcCCCCCC------cCCCCCCHHHHHHHcCCHHHHHHHHhcC-----CCCCCcCCCCCCHHHHHH
Confidence 999999888876 5578899999999999999999999887 888888889999886654
No 13
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.97 E-value=6.3e-31 Score=285.64 Aligned_cols=235 Identities=12% Similarity=-0.018 Sum_probs=160.2
Q ss_pred ccchhHHHhcCCchHHHHHHHCCCC---------cCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCC
Q 002053 421 AENCKWSCMFGEIEVPAEIVAGGVL---------RCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNC 491 (974)
Q Consensus 421 ~t~l~~Ac~fG~ieVV~~LL~~Ga~---------i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~ 491 (974)
.+++|+||+.|+.+.+..++..+.. ......+..|+||||+||..|+ .+++ ++|++.|+++|.+|..
T Consensus 16 ~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~--~~~v--~~Ll~~g~~~~~~~~~ 91 (285)
T 3d9h_A 16 PRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGH--QLSL--RNLISQGWAVNIITAD 91 (285)
T ss_dssp --------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTC--HHHH--HHHHHTTCCSCEECTT
T ss_pred HHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCC--HHHH--HHHHHCCCCCCCcCCC
Confidence 3566677777776555554443311 0011335566777777777666 5555 6677777777777777
Q ss_pred CCchhh----hhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHH
Q 002053 492 GDITSE----NLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQK 567 (974)
Q Consensus 492 G~TpL~----~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~ 567 (974)
|.|||| .++.+++++|+..+......+ ..++++|+.++..+
T Consensus 92 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~---------------------~~g~t~L~~A~~~~-------------- 136 (285)
T 3d9h_A 92 HVSPLHEACLGGHLSCVKILLKHGAQVNGVT---------------------ADWHTPLFNACVSG-------------- 136 (285)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCSSCCC---------------------TTCCCHHHHHHHHT--------------
T ss_pred CCCHHHHHHHCCcHHHHHHHHHCCCCCCCCC---------------------CCCCCHHHHHHHcC--------------
Confidence 777776 355666666665443322111 34445555433322
Q ss_pred HHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHH
Q 002053 568 LLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASL 647 (974)
Q Consensus 568 a~~~~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lL 647 (974)
..+ +++.|++.|++++..+ .|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++|++|
T Consensus 137 -----~~~-~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~L 209 (285)
T 3d9h_A 137 -----SWD-CVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKL 209 (285)
T ss_dssp -----CHH-HHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHH
T ss_pred -----HHH-HHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHH
Confidence 122 7888999999998655 499999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHHhhh
Q 002053 648 IALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGA 713 (974)
Q Consensus 648 L~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~a~ 713 (974)
+++|++++. |..|.||||+|+..|+.+++++|+++| ++++.+|.+|+||+..+.
T Consensus 210 l~~ga~~~~-------~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----ad~~~~d~~g~t~l~~A~ 263 (285)
T 3d9h_A 210 LESGADVNQ-------GKGQDSPLHAVVRTASEELACLLMDFG-----ADTQAKNAEGKRPVELVP 263 (285)
T ss_dssp HHTTCCTTC-------CBTTBCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCGGGGSC
T ss_pred HHCCCCCCC-------CCCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCCcCCCCCCHHHHhc
Confidence 999999874 478999999999999999999999988 999999999999997764
No 14
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=3.4e-31 Score=286.82 Aligned_cols=212 Identities=16% Similarity=0.075 Sum_probs=158.6
Q ss_pred ccccchhHHHhcCCchHHHHHHHCCCCcCC------CCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCC
Q 002053 419 QEAENCKWSCMFGEIEVPAEIVAGGVLRCH------TSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCG 492 (974)
Q Consensus 419 ~~~t~l~~Ac~fG~ieVV~~LL~~Ga~i~~------~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G 492 (974)
...++|.+||..|++++|++||+.|+.... ...+..|.||||.|+..+. ...++ ++|+..|+++|.+|..|
T Consensus 10 ~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~-~~~~v--~~Ll~~Gadvn~~d~~G 86 (269)
T 4b93_B 10 REVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAP-AQKRL--AKVPASGLGVNVTSQDG 86 (269)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTCC-------------------------------------------CCCCTTCCCTTS
T ss_pred cchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCC-HHHHH--HHHHHCCCCCCCcCCCC
Confidence 346799999999999999999999975321 1346679999999997766 13355 89999999999999999
Q ss_pred CchhhhhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHh
Q 002053 493 DITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEK 572 (974)
Q Consensus 493 ~TpL~~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~ 572 (974)
.||||... ..+...
T Consensus 87 ~TpLh~A~--------------------------------------------------~~g~~~---------------- 100 (269)
T 4b93_B 87 SSPLHVAA--------------------------------------------------LHGRAD---------------- 100 (269)
T ss_dssp CCHHHHHH--------------------------------------------------HTTCTT----------------
T ss_pred CCHHHHHH--------------------------------------------------HcCcHH----------------
Confidence 99998310 001110
Q ss_pred hHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 002053 573 LQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGA 652 (974)
Q Consensus 573 l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GA 652 (974)
++++|++.|++++.++..|.||||+|+..++.+++++|+++|+++|.+|..|+||||+||..|+.++|++||++|+
T Consensus 101 ----~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga 176 (269)
T 4b93_B 101 ----LIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGA 176 (269)
T ss_dssp ----HHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTC
T ss_pred ----HHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC
Confidence 6788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHHhhhh
Q 002053 653 APGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGAT 714 (974)
Q Consensus 653 d~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~a~~ 714 (974)
++|. +|..|.||||+|+..|+.++|++|+++| ++++++|.+|+||+..|.+
T Consensus 177 dvn~------~~~~g~t~Lh~A~~~g~~~~v~~Ll~~G-----ad~~~~d~~G~TpL~~A~~ 227 (269)
T 4b93_B 177 SINA------SNNKGNTALHEAVIEKHVFVVELLLLHG-----ASVQVLNKRQRTAVDCAEQ 227 (269)
T ss_dssp CTTC------BCTTSCBHHHHHHHTTCHHHHHHHHHTT-----CCSCCCCTTSCCSGGGSCT
T ss_pred CCCc------cccCCCcHHHHHHHcCCHHHHHHHHHCC-----CCCCCcCCCCCCHHHHHHh
Confidence 9887 5689999999999999999999999988 9999999999999987753
No 15
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.97 E-value=3.2e-31 Score=287.99 Aligned_cols=218 Identities=13% Similarity=0.025 Sum_probs=189.9
Q ss_pred cccccccchhHHHhcCCchHHHHHHHCCCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCch
Q 002053 416 MSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDIT 495 (974)
Q Consensus 416 ~~~~~~t~l~~Ac~fG~ieVV~~LL~~Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~Tp 495 (974)
.+..+.|++++||..|+.+++++||+.|++++ ..+..|+||||+||.+|+ .+++ ++|++.|++++..|..|.||
T Consensus 55 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~g~--~~~v--~~Ll~~ga~~~~~~~~g~t~ 128 (285)
T 3d9h_A 55 DAVSDWSPMHEAAIHGHQLSLRNLISQGWAVN--IITADHVSPLHEACLGGH--LSCV--KILLKHGAQVNGVTADWHTP 128 (285)
T ss_dssp SSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSC--EECTTCCCHHHHHHHTTC--HHHH--HHHHHTTCCSSCCCTTCCCH
T ss_pred CCccCCCHHHHHHHcCCHHHHHHHHHCCCCCC--CcCCCCCCHHHHHHHCCc--HHHH--HHHHHCCCCCCCCCCCCCCH
Confidence 34446699999999999999999999999988 678899999999999999 8888 99999999999999999999
Q ss_pred hh----hhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHH
Q 002053 496 SE----NLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKE 571 (974)
Q Consensus 496 L~----~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~ 571 (974)
|+ .++.+++++|+..+...... ..++++|+.++. .
T Consensus 129 L~~A~~~~~~~~v~~Ll~~g~~~~~~----------------------~~g~t~L~~A~~-------------------~ 167 (285)
T 3d9h_A 129 LFNACVSGSWDCVNLLLQHGASVQPE----------------------SDLASPIHEAAR-------------------R 167 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSSCS----------------------CTTSCHHHHHHH-------------------H
T ss_pred HHHHHHcCHHHHHHHHHHCCCCCCCC----------------------CCCCCHHHHHHH-------------------c
Confidence 99 47789999988765543221 235566654443 2
Q ss_pred hhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 002053 572 KLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALG 651 (974)
Q Consensus 572 ~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~G 651 (974)
+..+ +++.|++.|++++.+|..|.||||+|+..|+.+++++|+++|+++|. |..|+||||+|+..|+.++|++|+++|
T Consensus 168 g~~~-~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g 245 (285)
T 3d9h_A 168 GHVE-CVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFG 245 (285)
T ss_dssp TCHH-HHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCHH-HHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 2222 78999999999999999999999999999999999999999999995 889999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 002053 652 AAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 690 (974)
Q Consensus 652 Ad~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~G 690 (974)
++++. +|..|+||||+|+ ++.+++++|+++.
T Consensus 246 ad~~~------~d~~g~t~l~~A~--~~~~~~~~Ll~~~ 276 (285)
T 3d9h_A 246 ADTQA------KNAEGKRPVELVP--PESPLAQLFLERE 276 (285)
T ss_dssp CCTTC------CCTTSCCGGGGSC--TTSHHHHHHHHHC
T ss_pred CCCCC------cCCCCCCHHHHhc--CccHHHHHHHHhh
Confidence 99877 6799999999999 4578999999983
No 16
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.97 E-value=1.9e-30 Score=286.56 Aligned_cols=244 Identities=14% Similarity=0.053 Sum_probs=177.8
Q ss_pred cccchhHHHhcCCchHHHHHHHCCCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchhh--
Q 002053 420 EAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSE-- 497 (974)
Q Consensus 420 ~~t~l~~Ac~fG~ieVV~~LL~~Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL~-- 497 (974)
+.|||++||..|+.++|++||++|++++ ..+..|.+|++.++..+. ..++ .+++..+++++..|..|.||++
T Consensus 59 g~TpLh~A~~~g~~~iv~~Ll~~ga~~~--~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~d~~g~t~l~~A 132 (337)
T 4g8k_A 59 GWTPLHNAVQMSREDIVELLLRHGADPV--LRKKNGATPFILAAIAGS--VKLL--KLFLSKGADVNECDFYGFTAFMEA 132 (337)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTT--CCCTTCCCHHHHHHHHTC--HHHH--HHHHTTTCCTTCBCTTCCBHHHHH
T ss_pred CcCHHHHHHHcCCHHHHHHHHHcCCchh--hhccCCCchhHHHHhccc--chhh--HHhhhccchhhhhccCCCCHHHHH
Confidence 5689999999999999999999999888 667777788887777766 4454 6777777778777777888777
Q ss_pred --hhHHHHHHHHhhcCCCCCCCCCC----------ChhhhHHhH-----HHHhhhhc--------cCCCchhHHHHHhhh
Q 002053 498 --NLRMQFGKLLCLTSVSTPNYDPS----------NLSDISQLN-----SKISSLLK--------DENDDWDLMLKLTAE 552 (974)
Q Consensus 498 --~g~~~ivkLLl~g~~~~~~~~~~----------~~~~~~~l~-----~~l~~Ll~--------~~~~~~t~L~~~~~~ 552 (974)
.++.+++++|+..+......... +.+++...+ ..+..|+. .+..+.++++..+..
T Consensus 133 ~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~ 212 (337)
T 4g8k_A 133 AVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLS 212 (337)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHH
T ss_pred HHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHH
Confidence 35667777766544333221111 111111110 01111100 011122222211111
Q ss_pred cCCChHHHHHHHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhC-CCcccccCCCCCcH
Q 002053 553 EKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVA-GVNINFRDVNGWTA 631 (974)
Q Consensus 553 ~~~s~~~~~~~lL~~a~~~~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~-GAdvn~~D~~G~Tp 631 (974)
. .....+.++++|+++|+++|.+|..|+||||+||..|+.++|+.|+.. |+++|.+|..|+||
T Consensus 213 ~----------------~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~Tp 276 (337)
T 4g8k_A 213 S----------------DDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTA 276 (337)
T ss_dssp S----------------CTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBH
T ss_pred c----------------CcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCH
Confidence 1 112233488999999999999999999999999999999999999985 89999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCccc
Q 002053 632 LHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLN 701 (974)
Q Consensus 632 LH~Aa~~G~~eiV~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~ 701 (974)
||+||..|+.++|++||++||++|. .||||+|+.+|+.++|++||++| |++|+.
T Consensus 277 L~~A~~~g~~~iv~~Ll~~GAd~n~-----------~~~L~~A~~~~~~~iv~~Ll~~G-----A~~d~~ 330 (337)
T 4g8k_A 277 LLLAVELKLKKIAELLCKRGASTDC-----------GDLVMTARRNYDHSLVKVLLSHG-----AKEDFH 330 (337)
T ss_dssp HHHHHHTTCHHHHHHHHTTSCSSTT-----------CCHHHHHHHTTCHHHHHHHHHTT-----CCC---
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCC-----------CCHHHHHHHcCCHHHHHHHHHCc-----CCCCCC
Confidence 9999999999999999999998865 46999999999999999999998 888874
No 17
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.97 E-value=2.5e-30 Score=267.97 Aligned_cols=207 Identities=20% Similarity=0.165 Sum_probs=181.2
Q ss_pred ccchhHHHhcCCchHHHHHHHCCCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCC--CCCcc-ccCCCCchhh
Q 002053 421 AENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHI--PDVDV-ADNCGDITSE 497 (974)
Q Consensus 421 ~t~l~~Ac~fG~ieVV~~LL~~Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~G--Advna-~D~~G~TpL~ 497 (974)
.||+++||..|+.++++.|++.|..... ..+..|+||||+||..|+ .+++ ++|++.| ++++. .|..|.||+|
T Consensus 3 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~~g~t~L~~A~~~~~--~~~v--~~Ll~~~~~~~~~~~~~~~g~t~L~ 77 (228)
T 2dzn_A 3 NYPLHQACMENEFFKVQELLHSKPSLLL-QKDQDGRIPLHWSVSFQA--HEIT--SFLLSKMENVNLDDYPDDSGWTPFH 77 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGTT-CCCTTSCCHHHHHHHTTC--HHHH--HHHHHTCTTCCGGGCCCTTSCCHHH
T ss_pred ccHHHHHHHhCCHHHHHHHHhcCccccc-cCCCCCCCHHHHHHHcCC--HHHH--HHHHhccccccccccCCCCCCCHHH
Confidence 3789999999999999999999986652 367889999999999998 8887 9999999 45555 5667777776
Q ss_pred hhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHH
Q 002053 498 NLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWL 577 (974)
Q Consensus 498 ~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~l 577 (974)
. ++..+ .. .+
T Consensus 78 ~--------------------------------------------------A~~~~-------------------~~-~~ 87 (228)
T 2dzn_A 78 I--------------------------------------------------ACSVG-------------------NL-EV 87 (228)
T ss_dssp H--------------------------------------------------HHHHC-------------------CH-HH
T ss_pred H--------------------------------------------------HHHcC-------------------CH-HH
Confidence 2 11111 11 17
Q ss_pred HHHHHhCC--CCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCC
Q 002053 578 VQKAAEGG--KGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALG-AAP 654 (974)
Q Consensus 578 vk~LL~~G--ad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~G-Ad~ 654 (974)
++.|++.| ++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++| +++
T Consensus 88 ~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 167 (228)
T 2dzn_A 88 VKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAV 167 (228)
T ss_dssp HHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCS
T ss_pred HHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccc
Confidence 88889998 899999999999999999999999999999999999999999999999999999999999999999 888
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHH-HcCCCCcccCCcccCCCCCCHHHhhh
Q 002053 655 GALSDPTPKYPSGRTPADLASSIGHKGIAGYLA-ESDLSSALSAISLNKKDGDVAEVTGA 713 (974)
Q Consensus 655 n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLL-e~Gl~~h~adln~~d~~G~T~l~~a~ 713 (974)
+. +|..|+||||+|+..|+.+++++|+ ++| ++++.+|..|.||+..+.
T Consensus 168 ~~------~d~~g~t~L~~A~~~~~~~~v~~Ll~~~g-----a~~~~~~~~g~t~l~~A~ 216 (228)
T 2dzn_A 168 NW------QDKQGWTPLFHALAEGHGDAAVLLVEKYG-----AEYDLVDNKGAKAEDVAL 216 (228)
T ss_dssp CC------CCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----CCSCCBCTTSCBGGGGCS
T ss_pred cC------cCCCCCCHHHHHHHcCCHHHHHHHHHhcC-----CCCCccCCCCCcHHHHHH
Confidence 76 6689999999999999999999999 878 999999999999997764
No 18
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.97 E-value=9.4e-31 Score=272.09 Aligned_cols=216 Identities=17% Similarity=0.115 Sum_probs=187.5
Q ss_pred cchhHHHhcCCchHHHHHHHCCCC-cCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchhh---
Q 002053 422 ENCKWSCMFGEIEVPAEIVAGGVL-RCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSE--- 497 (974)
Q Consensus 422 t~l~~Ac~fG~ieVV~~LL~~Ga~-i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL~--- 497 (974)
+++++||..|++++++.|++.+.. .+ ..+..|.||||+||.+|+ .+++ ++|++.|++++..|..|.||||
T Consensus 8 ~~l~~A~~~g~~~~v~~ll~~~~~~~~--~~~~~g~t~L~~A~~~g~--~~~v--~~Ll~~g~~~~~~~~~g~t~L~~A~ 81 (231)
T 3aji_A 8 IMICNLAYSGKLDELKERILADKSLAT--RTDQDSRTALHWACSAGH--TEIV--EFLLQLGVPVNDKDDAGWSPLHIAA 81 (231)
T ss_dssp SHHHHHHHHTCHHHHHHHHHHCGGGGG--CCCTTSCCHHHHHHHHTC--HHHH--HHHHHTTCCSCCCCTTSCCHHHHHH
T ss_pred chHHHHHHhCCHHHHHHHHHhchhhhh--cCCCCCCCHHHHHHHcCc--HHHH--HHHHHhCCCCCCcCCCCCCHHHHHH
Confidence 689999999999999999988754 33 567889999999999999 8888 9999999999999999999999
Q ss_pred -hhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHH
Q 002053 498 -NLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVW 576 (974)
Q Consensus 498 -~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~ 576 (974)
.++.+++++|+..+......+ ..++++|+.++..+ ..+
T Consensus 82 ~~~~~~~v~~Ll~~g~~~~~~~---------------------~~g~t~L~~A~~~~-------------------~~~- 120 (231)
T 3aji_A 82 SAGXDEIVKALLVKGAHVNAVN---------------------QNGCTPLHYAASKN-------------------RHE- 120 (231)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCC---------------------TTSCCHHHHHHHTT-------------------CHH-
T ss_pred HcCHHHHHHHHHHcCCCCCCCC---------------------CCCCCHHHHHHHcC-------------------CHH-
Confidence 467889998887654433221 34566666554422 222
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 002053 577 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA 656 (974)
Q Consensus 577 lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~ 656 (974)
+++.|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 121 ~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 200 (231)
T 3aji_A 121 IAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYI 200 (231)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred HHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 002053 657 LSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 690 (974)
Q Consensus 657 ~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~G 690 (974)
+|..|.||||+|+..++.+++++|+++|
T Consensus 201 ------~~~~g~t~l~~A~~~~~~~i~~lL~~~~ 228 (231)
T 3aji_A 201 ------ENKEEKTPLQVAKGGLGLILKRLAEGEE 228 (231)
T ss_dssp ------CCTTSCCHHHHSCHHHHHHHHHHHHHHH
T ss_pred ------CCCCCCCHHHHHHhhHHHHHHHHHcccc
Confidence 6689999999999999999999999877
No 19
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.97 E-value=2.2e-30 Score=292.23 Aligned_cols=222 Identities=17% Similarity=0.143 Sum_probs=191.5
Q ss_pred ccccchhHHHhcCCchHHHHHH--------HCCCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccC
Q 002053 419 QEAENCKWSCMFGEIEVPAEIV--------AGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADN 490 (974)
Q Consensus 419 ~~~t~l~~Ac~fG~ieVV~~LL--------~~Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~ 490 (974)
.+.|+|+|||..|+.++++.|+ +.|++++ ..+..|.||||+||.+|+ .+++ ++|+++|++++..|.
T Consensus 124 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn--~~d~~g~TpL~~A~~~g~--~~iv--~~Ll~~ga~~~~~~~ 197 (373)
T 2fo1_E 124 HNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVN--AMDCDENTPLMLAVLARR--RRLV--AYLMKAGADPTIYNK 197 (373)
T ss_dssp SCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTT--CCCTTSCCHHHHHHHHTC--HHHH--HHHHHTTCCSCCCCT
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCc--CCCCCCCCHHHHHHHcCh--HHHH--HHHHHCCCCCcccCC
Confidence 4568999999999999888876 8999998 778899999999999999 8888 999999999999999
Q ss_pred CCCchhh----hhHHHHHHHHhhcC---CCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHH
Q 002053 491 CGDITSE----NLRMQFGKLLCLTS---VSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEK 563 (974)
Q Consensus 491 ~G~TpL~----~g~~~ivkLLl~g~---~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~ 563 (974)
.|.|||+ .++.+++++|+..+ .... ..+..++++|+.++..++..
T Consensus 198 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~---------------------~~d~~g~t~L~~A~~~~~~~------- 249 (373)
T 2fo1_E 198 SERSALHQAAANRDFGMMVYMLNSTKLKGDIE---------------------ELDRNGMTALMIVAHNEGRD------- 249 (373)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTS---------------------CCCTTSCCHHHHHHHSCSTT-------
T ss_pred CCCCHHHHHHHCCCHHHHHHHHhcCccccChh---------------------hcCCCCCCHHHHHHHhCCcc-------
Confidence 9999999 47789999987643 1111 11256777777655433211
Q ss_pred HHHHHHHHhhHHHHHHHHHhCCCCCCc--------ccCCCCcHHHHHHHcCCHhHHHHHHhCC-CcccccCCCCCcHHHH
Q 002053 564 LVQKLLKEKLQVWLVQKAAEGGKGPCV--------LDHCGQGVLHFAAALGYDWALEPTTVAG-VNINFRDVNGWTALHW 634 (974)
Q Consensus 564 lL~~a~~~~l~~~lvk~LL~~Gad~n~--------~D~~G~TpLH~Aa~~G~~eiVklLL~~G-Advn~~D~~G~TpLH~ 634 (974)
...++++|++.|++++. .|..|.||||+||..|+.++|++|+++| +++|.+|..|+||||+
T Consensus 250 ----------~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~ 319 (373)
T 2fo1_E 250 ----------QVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIML 319 (373)
T ss_dssp ----------HHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHH
T ss_pred ----------hHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHH
Confidence 11278999999999987 6779999999999999999999999876 9999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 002053 635 AAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 690 (974)
Q Consensus 635 Aa~~G~~eiV~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~G 690 (974)
|+..|+.++|++|+++|++++. +|..|.||||+|+.+|+.+|+++|++++
T Consensus 320 A~~~g~~~iv~~Ll~~gad~~~------~d~~g~t~l~~A~~~g~~~iv~~Ll~~~ 369 (373)
T 2fo1_E 320 AAQEGRIEVVMYLIQQGASVEA------VDATDHTARQLAQANNHHNIVDIFDRCR 369 (373)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSC------CCSSSCCHHHHHHHTTCHHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHHcCCCccC------CCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 9999999999999999999887 6689999999999999999999999987
No 20
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.97 E-value=5.3e-30 Score=264.98 Aligned_cols=208 Identities=17% Similarity=0.150 Sum_probs=158.2
Q ss_pred CCchHHHHHHHCCCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchhh----hhHHHHHHH
Q 002053 431 GEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSE----NLRMQFGKL 506 (974)
Q Consensus 431 G~ieVV~~LL~~Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL~----~g~~~ivkL 506 (974)
|+.+++++|+++|++++. ..+..|.||||+||..|+ .+++ ++|+++|++++..|..|.||+| .++.+++++
T Consensus 2 g~~~~i~~Ll~~g~~~~~-~~d~~g~t~L~~A~~~g~--~~~v--~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 76 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHN-QTDRTGETALHLAARYSR--SDAA--KRLLEASADANIQDNMGRTPLHAAVSADAQGVFQI 76 (223)
T ss_dssp ---CCEETTEETTCCTTC-CCTTTCCCHHHHHHHTTC--HHHH--HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred CcHHHHHHHHHcCCCccc-ccCCCCCchHHHHHHcCC--HHHH--HHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 556666667777766552 235567777777777666 5555 6777777777777667777766 355666666
Q ss_pred HhhcCC-CCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHHhCC
Q 002053 507 LCLTSV-STPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGG 585 (974)
Q Consensus 507 Ll~g~~-~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~lvk~LL~~G 585 (974)
|+..+. ..... +..++++|+.++.. +..+ +++.|++.|
T Consensus 77 Ll~~~~~~~~~~---------------------~~~g~t~L~~A~~~-------------------~~~~-~~~~Ll~~g 115 (223)
T 2f8y_A 77 LIRNRATDLDAR---------------------MHDGTTPLILAARL-------------------AVEG-MLEDLINSH 115 (223)
T ss_dssp HHHBTTSCTTCC---------------------CTTCCCHHHHHHHH-------------------TCHH-HHHHHHHTT
T ss_pred HHHcCCCCcccC---------------------CCCCCcHHHHHHHh-------------------CcHH-HHHHHHHcC
Confidence 655433 11111 12344444433322 2222 788999999
Q ss_pred CCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCC
Q 002053 586 KGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYP 665 (974)
Q Consensus 586 ad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~~~d~~~kD~ 665 (974)
++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. +|.
T Consensus 116 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~~~ 189 (223)
T 2f8y_A 116 ADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDI------TDH 189 (223)
T ss_dssp CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC------CCT
T ss_pred CCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcc------ccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999877 668
Q ss_pred CCCCHHHHHHHcCcHHHHHHHHHcC
Q 002053 666 SGRTPADLASSIGHKGIAGYLAESD 690 (974)
Q Consensus 666 ~G~TPLhlAa~~G~~eiv~lLLe~G 690 (974)
.|.||||+|+..|+.+++++|+++|
T Consensus 190 ~g~t~l~~A~~~~~~~i~~~L~~~g 214 (223)
T 2f8y_A 190 MDRLPRDIAQERMHHDIVRLLDEYN 214 (223)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred cCCCHHHHHHHhcchHHHHHHHHcC
Confidence 9999999999999999999999998
No 21
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=3e-30 Score=278.72 Aligned_cols=207 Identities=19% Similarity=0.152 Sum_probs=179.2
Q ss_pred ccchhHHHhcCCchHHHHHHHCCCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchhhhhH
Q 002053 421 AENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLR 500 (974)
Q Consensus 421 ~t~l~~Ac~fG~ieVV~~LL~~Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL~~g~ 500 (974)
.+++++||..|++++|++||+.|++++ ..+..|.||||+||..|+ .+++ ++|+++|+++|.+|..|.||||...
T Consensus 41 ~t~l~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~g~--~~~v--~~Ll~~ga~~~~~~~~g~tpL~~A~ 114 (299)
T 1s70_B 41 GAVFLAACSSGDTEEVLRLLERGADIN--YANVDGLTALHQACIDDN--VDMV--KFLVENGANINQPDNEGWIPLHAAA 114 (299)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHCCCTT--CBCTTCCBHHHHHHHTTC--HHHH--HHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred ccHHHHHHHcCCHHHHHHHHHcCCCCc--ccCCCCCCHHHHHHHcCC--HHHH--HHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 478999999999999999999999988 677889999999999999 8888 9999999999999999999987311
Q ss_pred HHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHHHHH
Q 002053 501 MQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQK 580 (974)
Q Consensus 501 ~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~lvk~ 580 (974)
. .+.. .++++
T Consensus 115 ~---------------------------------------------------------------------~g~~-~~v~~ 124 (299)
T 1s70_B 115 S---------------------------------------------------------------------CGYL-DIAEY 124 (299)
T ss_dssp H---------------------------------------------------------------------HTCH-HHHHH
T ss_pred H---------------------------------------------------------------------cCCH-HHHHH
Confidence 0 0001 16788
Q ss_pred HHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHh-CCCcccc--------------------------cCCCCCcHHH
Q 002053 581 AAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTV-AGVNINF--------------------------RDVNGWTALH 633 (974)
Q Consensus 581 LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~-~GAdvn~--------------------------~D~~G~TpLH 633 (974)
|+++|++++..|..|.||||+|+..|+.++++.|+. .|++++. .+..|.||||
T Consensus 125 Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~ 204 (299)
T 1s70_B 125 LISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALH 204 (299)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHH
T ss_pred HHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHH
Confidence 888999999999999999999999999888887665 4555543 5678999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHHhhh
Q 002053 634 WAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGA 713 (974)
Q Consensus 634 ~Aa~~G~~eiV~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~a~ 713 (974)
+||..|+.++|++|+++|++++. +|..|.||||+|+..|+.+++++|+++| ++++++|..|.||+..+.
T Consensus 205 ~A~~~g~~~~v~~Ll~~g~d~~~------~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-----ad~~~~d~~g~t~l~~A~ 273 (299)
T 1s70_B 205 VAAAKGYTEVLKLLIQARYDVNI------KDYDGWTPLHAAAHWGKEEACRILVENL-----CDMEAVNKVGQTAFDVAD 273 (299)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTC------CCTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCTTTSCC
T ss_pred HHHHCCcHHHHHHHHHcCCCCCC------cCCCCCcHHHHHHhcCCHHHHHHHHHcC-----CCCCCcCCCCCCHHHHHH
Confidence 99999999999999999999877 6689999999999999999999999988 999999999999987764
Q ss_pred h
Q 002053 714 T 714 (974)
Q Consensus 714 ~ 714 (974)
+
T Consensus 274 ~ 274 (299)
T 1s70_B 274 E 274 (299)
T ss_dssp S
T ss_pred H
Confidence 3
No 22
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.97 E-value=2.1e-30 Score=292.41 Aligned_cols=235 Identities=16% Similarity=0.120 Sum_probs=197.3
Q ss_pred cccccchhHHHhcCCchHHHHHHHCCCCcCCCCCC-CCCChhHHHHHhcCCCccchhhhhhhh--------cCCCCCccc
Q 002053 418 QQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQ-KVGRVPFYVTCSNRLSCSEVREFEYRA--------SHIPDVDVA 488 (974)
Q Consensus 418 ~~~~t~l~~Ac~fG~ieVV~~LL~~Ga~i~~~~~~-~~G~TPLhvA~~ng~~~seVv~feyLl--------~~GAdvna~ 488 (974)
....|++++||..| .++++.|+..+ ++ ..+ ..|+||||+||.+|+ .+++ ++|+ ..|+++|..
T Consensus 92 ~~g~t~L~~Aa~~~-~~~~~~L~~~~--~n--~~d~~~g~t~Lh~Aa~~g~--~~~v--~~Ll~~~~~~ll~~ga~vn~~ 162 (373)
T 2fo1_E 92 PESPIKLHTEAAGS-YAITEPITRES--VN--IIDPRHNRTVLHWIASNSS--AEKS--EDLIVHEAKECIAAGADVNAM 162 (373)
T ss_dssp --CCCHHHHHHHSS-SCCCSCCSTTT--TT--TCCCSSCCCHHHHHHCTTC--CSCC--TTHHHHHHHHHHHTCCCTTCC
T ss_pred CCCccHHHHHhcCC-chHHHHhcccc--cc--ccCCcCCCCHHHHHHHCCC--HHHH--HHHHHHHHHHHHhcCCCCcCC
Confidence 34568999999955 58888887654 34 344 689999999999999 7777 6665 899999999
Q ss_pred cCCCCchhh----hhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHH
Q 002053 489 DNCGDITSE----NLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKL 564 (974)
Q Consensus 489 D~~G~TpL~----~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~l 564 (974)
|..|.|||| .++.+++++|+..+......+ ..++++|+.++..+
T Consensus 163 d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~---------------------~~g~t~L~~A~~~g----------- 210 (373)
T 2fo1_E 163 DCDENTPLMLAVLARRRRLVAYLMKAGADPTIYN---------------------KSERSALHQAAANR----------- 210 (373)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC---------------------TTCCCHHHHHHHTT-----------
T ss_pred CCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccC---------------------CCCCCHHHHHHHCC-----------
Confidence 999999999 577899999987665543322 45666766555432
Q ss_pred HHHHHHHhhHHHHHHHHHhCC---CCCCcccCCCCcHHHHHHHcC---CHhHHHHHHhCCCcccc--------cCCCCCc
Q 002053 565 VQKLLKEKLQVWLVQKAAEGG---KGPCVLDHCGQGVLHFAAALG---YDWALEPTTVAGVNINF--------RDVNGWT 630 (974)
Q Consensus 565 L~~a~~~~l~~~lvk~LL~~G---ad~n~~D~~G~TpLH~Aa~~G---~~eiVklLL~~GAdvn~--------~D~~G~T 630 (974)
..+ +++.|++.| ++++..|..|.||||+||..| +.+++++|+++|++++. +|..|+|
T Consensus 211 --------~~~-~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t 281 (373)
T 2fo1_E 211 --------DFG-MMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRT 281 (373)
T ss_dssp --------CHH-HHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCC
T ss_pred --------CHH-HHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCC
Confidence 222 788999988 899999999999999999998 89999999999999986 6779999
Q ss_pred HHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHH
Q 002053 631 ALHWAAYCGRERTVASLIALG-AAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAE 709 (974)
Q Consensus 631 pLH~Aa~~G~~eiV~lLL~~G-Ad~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l 709 (974)
|||+||..|+.++|++|+++| ++++. +|..|.||||+|+..|+.++|++|+++| ++++.+|..|.||+
T Consensus 282 ~Lh~A~~~g~~~~v~~Ll~~~~~~~n~------~d~~g~TpL~~A~~~g~~~iv~~Ll~~g-----ad~~~~d~~g~t~l 350 (373)
T 2fo1_E 282 ALHYAAQVSNMPIVKYLVGEKGSNKDK------QDEDGKTPIMLAAQEGRIEVVMYLIQQG-----ASVEAVDATDHTAR 350 (373)
T ss_dssp THHHHHSSCCHHHHHHHHHHSCCCTTC------CCTTCCCHHHHHHHHTCHHHHHHHHHTT-----CCSSCCCSSSCCHH
T ss_pred HHHHHHHhCCHHHHHHHHHhcCCCccC------cCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCccCCCCCCCCHH
Confidence 999999999999999999886 88877 6689999999999999999999999988 99999999999999
Q ss_pred Hhhh
Q 002053 710 VTGA 713 (974)
Q Consensus 710 ~~a~ 713 (974)
..|.
T Consensus 351 ~~A~ 354 (373)
T 2fo1_E 351 QLAQ 354 (373)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
No 23
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.97 E-value=6.5e-30 Score=271.67 Aligned_cols=210 Identities=19% Similarity=0.126 Sum_probs=151.9
Q ss_pred CCCCCCChhHHHHHhcC-----------CCccchhhhhhhhcCCCCCccc-cCCCCchhh----hhHHHHHHHHhhcCCC
Q 002053 450 SSQKVGRVPFYVTCSNR-----------LSCSEVREFEYRASHIPDVDVA-DNCGDITSE----NLRMQFGKLLCLTSVS 513 (974)
Q Consensus 450 ~~~~~G~TPLhvA~~ng-----------~~~seVv~feyLl~~GAdvna~-D~~G~TpL~----~g~~~ivkLLl~g~~~ 513 (974)
.++..|+||||+||..| ....+++ ++|+..|++++.. |..|.|||| .++.+++++|+..+..
T Consensus 5 ~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v--~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 82 (253)
T 1yyh_A 5 VRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVI--SDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD 82 (253)
T ss_dssp -------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCCCCCcHHHHHHhccccccccchhhcCCChHHH--HHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 66888999999999877 1126676 9999999999664 899999999 5789999998876554
Q ss_pred CCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHHhCCC-CCCccc
Q 002053 514 TPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGK-GPCVLD 592 (974)
Q Consensus 514 ~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~lvk~LL~~Ga-d~n~~D 592 (974)
....+ ..++++|+.++..+ ..+ +++.|++.|+ +++..|
T Consensus 83 ~~~~~---------------------~~g~t~L~~A~~~~-------------------~~~-~v~~Ll~~~~~~~~~~~ 121 (253)
T 1yyh_A 83 ANIQD---------------------NMGRTPLHAAVSAD-------------------AQG-VFQILIRNRATDLDARM 121 (253)
T ss_dssp TTCCC---------------------TTSCCHHHHHHHHT-------------------CHH-HHHHHHHSTTSCTTCCC
T ss_pred CCCCC---------------------CCCCCHHHHHHHcC-------------------CHH-HHHHHHHcCCCCccccC
Confidence 33222 45667776554422 222 7889999987 999999
Q ss_pred CCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHH
Q 002053 593 HCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPAD 672 (974)
Q Consensus 593 ~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~~~d~~~kD~~G~TPLh 672 (974)
..|.||||+|+..|+.+++++|+++|+++|.+|..|+||||+||..|+.++|++|+++|++++. +|..|.||||
T Consensus 122 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~tpL~ 195 (253)
T 1yyh_A 122 HDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM------QNNREETPLF 195 (253)
T ss_dssp TTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC------CCTTSCCHHH
T ss_pred CCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------cCCCCCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999887 6689999999
Q ss_pred HHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHHhhh
Q 002053 673 LASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGA 713 (974)
Q Consensus 673 lAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~a~ 713 (974)
+|+..|+.+++++|+++| ++++++|..|.||+..|.
T Consensus 196 ~A~~~~~~~~v~~Ll~~g-----a~~~~~d~~g~tpl~~A~ 231 (253)
T 1yyh_A 196 LAAREGSYETAKVLLDHF-----ANRDITDHMDRLPRDIAQ 231 (253)
T ss_dssp HHHHHTCHHHHHHHHHTT-----CCTTCCCTTCCCHHHHHH
T ss_pred HHHHCCCHHHHHHHHHcC-----CCccccccCCCCHHHHHH
Confidence 999999999999999988 999999999999997664
No 24
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.96 E-value=3.7e-29 Score=259.33 Aligned_cols=219 Identities=18% Similarity=0.128 Sum_probs=184.3
Q ss_pred ccccchhHHHhcCCchHHHHHHHCCCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCcccc-CCCCchhh
Q 002053 419 QEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVAD-NCGDITSE 497 (974)
Q Consensus 419 ~~~t~l~~Ac~fG~ieVV~~LL~~Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D-~~G~TpL~ 497 (974)
...+++++||..|+.+++++|++.|++++ ..+..|.||||+||.+|+ .+++ ++|++.|++++..+ ..|.||++
T Consensus 8 ~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~--~~~v--~~Ll~~~~~~~~~~~~~~~t~L~ 81 (240)
T 3eu9_A 8 YSTWDIVKATQYGIYERCRELVEAGYDVR--QPDKENVTLLHWAAINNR--IDLV--KYYISKGAIVDQLGGDLNSTPLH 81 (240)
T ss_dssp GGGCCHHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHTTC--HHHH--HHHHHTTCCTTCCBTTTTBCHHH
T ss_pred ccchHHHHHHHcCChHHHHHHHHcCCCcC--CCCCCCCCHHHHHHHhCC--HHHH--HHHHHcCCcchhhcCCcCCChhH
Confidence 34578999999999999999999999888 678889999999999999 8887 99999999998764 45899999
Q ss_pred ----hhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhh
Q 002053 498 ----NLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKL 573 (974)
Q Consensus 498 ----~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l 573 (974)
.++.+++++|+..+....... ..++++++.++.. +.
T Consensus 82 ~A~~~~~~~~v~~Ll~~g~~~~~~~---------------------~~g~t~l~~A~~~-------------------~~ 121 (240)
T 3eu9_A 82 WATRQGHLSMVVQLMKYGADPSLID---------------------GEGCSCIHLAAQF-------------------GH 121 (240)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCC---------------------TTSCCHHHHHHHT-------------------TC
T ss_pred HHHHcCCHHHHHHHHHcCCCCcccC---------------------CCCCCHHHHHHHc-------------------CH
Confidence 467888888887654433221 3455565544432 22
Q ss_pred HHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCC-HhHHHHHHhCCCcccccCC-CCCcHHHHHHHcCCHHHHHHHHHcC
Q 002053 574 QVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGY-DWALEPTTVAGVNINFRDV-NGWTALHWAAYCGRERTVASLIALG 651 (974)
Q Consensus 574 ~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~-~eiVklLL~~GAdvn~~D~-~G~TpLH~Aa~~G~~eiV~lLL~~G 651 (974)
.+ +++.|++.|++++.+|..|.||||+|+..++ .+++++|+..|++++..+. .|.||||+|+..|+.+++++|+++|
T Consensus 122 ~~-~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 200 (240)
T 3eu9_A 122 TS-IVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAG 200 (240)
T ss_dssp HH-HHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHT
T ss_pred HH-HHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 22 7888999999999999999999999997776 8899999999999999987 8999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 002053 652 AAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 690 (974)
Q Consensus 652 Ad~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~G 690 (974)
++++. +|..|.||||+|+..|+.+++++|++++
T Consensus 201 ~~~~~------~~~~g~t~l~~A~~~~~~~~v~~L~~~~ 233 (240)
T 3eu9_A 201 ANVDA------QNIKGESALDLAKQRKNVWMINHLQEAR 233 (240)
T ss_dssp CCTTC------BCTTSCBHHHHHHHTTCHHHHHHHHHHC
T ss_pred CCCCC------cCCCCCCHHHHHHHcCcHHHHHHHHHhh
Confidence 99877 5689999999999999999999999987
No 25
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.96 E-value=2.6e-29 Score=261.80 Aligned_cols=203 Identities=16% Similarity=0.095 Sum_probs=164.3
Q ss_pred ccchhHHHhcCCchHHHHHHHC-CCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCC-----ccccCCCCc
Q 002053 421 AENCKWSCMFGEIEVPAEIVAG-GVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDV-----DVADNCGDI 494 (974)
Q Consensus 421 ~t~l~~Ac~fG~ieVV~~LL~~-Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdv-----na~D~~G~T 494 (974)
.|++++||..|+.++++.||+. |++++ ..+..|+||||+||..|+ .+++ ++|++.|+++ +..|..|.|
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~~g~~~~--~~~~~g~t~L~~A~~~g~--~~~v--~~Ll~~~~~~~~~~~~~~~~~g~t 77 (232)
T 2rfa_A 4 ESPLLLAAKENDVQALSKLLKFEGCEVH--QRGAMGETALHIAALYDN--LEAA--MVLMEAAPELVFEPMTSELYEGQT 77 (232)
T ss_dssp TCHHHHHHHTTCHHHHHHHHTTTCSCTT--CCCTTSCCHHHHHHHTTC--HHHH--HHHHHHCGGGGGCCCCSTTTTTCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHhcCCCcc--cCCCCCCCHHHHHHHcCC--HHHH--HHHHHcCchhccccccccCCCCcC
Confidence 4799999999999999999998 99888 678899999999999999 8888 9999999987 566777888
Q ss_pred hhh----hhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHH
Q 002053 495 TSE----NLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLK 570 (974)
Q Consensus 495 pL~----~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~ 570 (974)
||| .++.+++++|+..+........ ...
T Consensus 78 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~---------------------~~~--------------------------- 109 (232)
T 2rfa_A 78 ALHIAVINQNVNLVRALLARGASVSARAT---------------------GSV--------------------------- 109 (232)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCC---------------------SGG---------------------------
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCcccC---------------------Ccc---------------------------
Confidence 887 2445555555443322211100 000
Q ss_pred HhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHH----HH
Q 002053 571 EKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTV----AS 646 (974)
Q Consensus 571 ~~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV----~l 646 (974)
....++..|..|.||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++ ++
T Consensus 110 -------------~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~ 176 (232)
T 2rfa_A 110 -------------FHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNL 176 (232)
T ss_dssp -------------GSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHH
T ss_pred -------------eeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHH
Confidence 0002333455899999999999999999999999999999999999999999999999988 99
Q ss_pred HHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 002053 647 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 690 (974)
Q Consensus 647 LL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~G 690 (974)
|+++|++++.....+.+|..|+||||+|+..|+.+++++|+++|
T Consensus 177 Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g 220 (232)
T 2rfa_A 177 LLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKR 220 (232)
T ss_dssp HHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 99999988532222457899999999999999999999999988
No 26
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.96 E-value=4.1e-29 Score=267.06 Aligned_cols=202 Identities=13% Similarity=-0.009 Sum_probs=175.9
Q ss_pred CCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchhh----hhHHHHHHHHhhcCCCCCCCCCCChhhhHHhH
Q 002053 454 VGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSE----NLRMQFGKLLCLTSVSTPNYDPSNLSDISQLN 529 (974)
Q Consensus 454 ~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL~----~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~ 529 (974)
.|+||||+||..|+ .+++ ++|++.|+++|..|..|.|||| .++.+++++|+..+......+
T Consensus 2 ~g~t~L~~A~~~g~--~~~v--~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~----------- 66 (261)
T 2xai_A 2 SDWSPMHEAAIHGH--QLSL--RNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVT----------- 66 (261)
T ss_dssp --CCHHHHHHHHTC--HHHH--HHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-----------
T ss_pred CCCCHHHHHHHcCC--HHHH--HHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC-----------
Confidence 58999999999999 7887 9999999999999999999999 477899999887654433222
Q ss_pred HHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHh
Q 002053 530 SKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDW 609 (974)
Q Consensus 530 ~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~e 609 (974)
..++++|+.++..+ ..+ +++.|++.|++++.. ..|.||||+|+..|+.+
T Consensus 67 ----------~~g~t~L~~A~~~~-------------------~~~-~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~ 115 (261)
T 2xai_A 67 ----------ADWHTPLFNACVSG-------------------SWD-CVNLLLQHGASVQPE-SDLASPIHEAARRGHVE 115 (261)
T ss_dssp ----------TTSCCHHHHHHHHT-------------------CHH-HHHHHHHTTCCSSCS-CTTCCHHHHHHHTTCHH
T ss_pred ----------CCCCCHHHHHHHcC-------------------CHH-HHHHHHHCCCCCCCC-CCCCCHHHHHHHcCcHH
Confidence 45667776555432 222 789999999999864 46999999999999999
Q ss_pred HHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHc
Q 002053 610 ALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAES 689 (974)
Q Consensus 610 iVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~ 689 (974)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. +..|.||||+|+..|+.+++++|+++
T Consensus 116 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-------~~~g~t~Lh~A~~~~~~~~v~~Ll~~ 188 (261)
T 2xai_A 116 CVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-------GKGQDSPLHAVARTASEELACLLMDF 188 (261)
T ss_dssp HHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-------CBTTBCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-------CCCCCChHHHHHHcCCHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999874 47899999999999999999999998
Q ss_pred CCCCcccCCcccCCCCCCHHHhhh
Q 002053 690 DLSSALSAISLNKKDGDVAEVTGA 713 (974)
Q Consensus 690 Gl~~h~adln~~d~~G~T~l~~a~ 713 (974)
| ++++.+|..|+||+..+.
T Consensus 189 g-----ad~~~~d~~g~tpl~~A~ 207 (261)
T 2xai_A 189 G-----ADTQAKNAEGKRPVELVP 207 (261)
T ss_dssp T-----CCTTCCCTTSCCGGGGSC
T ss_pred C-----CCCCCcCCCCCChhhhcc
Confidence 8 999999999999997764
No 27
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.96 E-value=9.3e-30 Score=266.62 Aligned_cols=202 Identities=17% Similarity=0.133 Sum_probs=173.8
Q ss_pred cccccchhHHHhcCCchHHHHHHHCCC----CcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCC
Q 002053 418 QQEAENCKWSCMFGEIEVPAEIVAGGV----LRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGD 493 (974)
Q Consensus 418 ~~~~t~l~~Ac~fG~ieVV~~LL~~Ga----~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~ 493 (974)
..+.|++++||..|+.+++++|++.|. +++ ..+..|+||||+||..|+ .+++ ++|+++|++++.+|..|.
T Consensus 6 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~--~~~~~g~t~L~~A~~~~~--~~~v--~~Ll~~g~~~~~~~~~g~ 79 (236)
T 1ikn_D 6 EDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLN--FQNNLQQTPLHLAVITNQ--PEIA--EALLGAGCDPELRDFRGN 79 (236)
T ss_dssp -CCCCTTHHHHHTTCSSSSSCCCC-----CCCCC--CCCTTCCCHHHHHHHTTC--HHHH--HCCCSCCCCSCCCCTTCC
T ss_pred CCCCchhHHHHHcCChhHHHHHHHHhhccHHHhh--ccCCCCCCHHHHHHHcCC--HHHH--HHHHHcCCCCCCcCCCCC
Confidence 345689999999999999999998876 455 678889999999999999 8887 999999999999999999
Q ss_pred chhhh----hHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHH
Q 002053 494 ITSEN----LRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLL 569 (974)
Q Consensus 494 TpL~~----g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~ 569 (974)
||||. ++.+
T Consensus 80 t~L~~A~~~~~~~------------------------------------------------------------------- 92 (236)
T 1ikn_D 80 TPLHLACEQGCLA------------------------------------------------------------------- 92 (236)
T ss_dssp CHHHHHHHHTCHH-------------------------------------------------------------------
T ss_pred CHHHHHHHcCCHH-------------------------------------------------------------------
Confidence 99983 1222
Q ss_pred HHhhHHHHHHHHHhCCCC------CCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCC-CCCcHHHHHHHcCCHH
Q 002053 570 KEKLQVWLVQKAAEGGKG------PCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDV-NGWTALHWAAYCGRER 642 (974)
Q Consensus 570 ~~~l~~~lvk~LL~~Gad------~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~-~G~TpLH~Aa~~G~~e 642 (974)
+++.|++.|++ ++..|..|.||||+||..|+.+++++|+++|++++.++. .|+||||+|+..|+.+
T Consensus 93 -------~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~ 165 (236)
T 1ikn_D 93 -------SVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPD 165 (236)
T ss_dssp -------HHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHH
T ss_pred -------HHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 45556666654 467788999999999999999999999999999999998 9999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCc--ccCCCCCCHHH
Q 002053 643 TVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAIS--LNKKDGDVAEV 710 (974)
Q Consensus 643 iV~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln--~~d~~G~T~l~ 710 (974)
+|++|+++|++++. +|..|.||||+|+..|+.+++++|+++| ++.. +.+..|.|+..
T Consensus 166 ~v~~Ll~~ga~~~~------~~~~g~tpl~~A~~~~~~~~~~~Ll~~g-----a~~~~~~~~~~~~~~~~ 224 (236)
T 1ikn_D 166 LVSLLLKCGADVNR------VTYQGYSPYQLTWGRPSTRIQQQLGQLT-----LENLQMLPESEDEESYD 224 (236)
T ss_dssp HHHHHHTTTCCSCC------CCTTCCCGGGGCTTSSCHHHHHHHHTTS-----CGGGSSCCCCCTTTCCC
T ss_pred HHHHHHHcCCCCCc------ccCCCCCHHHHHHccCchHHHHHHHHcc-----hhhhhcCCccchHHHHh
Confidence 99999999999887 6689999999999999999999999988 6554 77788887643
No 28
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.96 E-value=8.2e-29 Score=250.65 Aligned_cols=113 Identities=29% Similarity=0.366 Sum_probs=97.3
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 002053 577 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA 656 (974)
Q Consensus 577 lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~ 656 (974)
+++.|++.|++++.+|..|+||||+||..|+.++|++|+++|+++|.+|..|+||||+||..|+.++|++|+++|++++.
T Consensus 52 ~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~ 131 (169)
T 4gpm_A 52 VVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNT 131 (169)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc
Confidence 45566678888999999999999999999999999999999999999999999999999999999999999999998877
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcc
Q 002053 657 LSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISL 700 (974)
Q Consensus 657 ~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~ 700 (974)
+|..|+||||+|+..|+.+++++|+++| |+++-
T Consensus 132 ------~d~~G~TpL~~A~~~g~~~iv~~Ll~~G-----A~ie~ 164 (169)
T 4gpm_A 132 ------SDSDGRTPLDLAREHGNEEVVKLLEKQG-----GWLEH 164 (169)
T ss_dssp ------CCTTSCCHHHHHHHTTCHHHHHHHHTC-----------
T ss_pred ------cCCCCCCHHHHHHHcCCHHHHHHHHHCC-----CCcCC
Confidence 6689999999999999999999999988 77653
No 29
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.96 E-value=2.6e-29 Score=272.04 Aligned_cols=189 Identities=17% Similarity=0.072 Sum_probs=143.9
Q ss_pred cccchhHHHhcCCch-HHHHHHHCCCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchhhh
Q 002053 420 EAENCKWSCMFGEIE-VPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN 498 (974)
Q Consensus 420 ~~t~l~~Ac~fG~ie-VV~~LL~~Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL~~ 498 (974)
..+++++|+..|+.+ ++.+|++.|+++| ..+..|+||||+||.+|+ .+++ ++|+..|++++..+..|.||++.
T Consensus 52 ~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn--~~d~~G~TpLh~A~~~g~--~~~v--~~Ll~~~a~~~~~~~~g~t~l~~ 125 (269)
T 4b93_B 52 FCHPLCQCPKCAPAQKRLAKVPASGLGVN--VTSQDGSSPLHVAALHGR--ADLI--PLLLKHGANAGARNADQAVPLHL 125 (269)
T ss_dssp -----------------------CCCCTT--CCCTTSCCHHHHHHHTTC--TTHH--HHHHHTTCCTTCCCTTCCCHHHH
T ss_pred CCCHHHHHHHhCCHHHHHHHHHHCCCCCC--CcCCCCCCHHHHHHHcCc--HHHH--HHHHhcCCCcCccCCCCCCcccc
Confidence 457889999988874 8899999999998 778899999999999999 8888 99999999999999999998872
Q ss_pred hHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHHH
Q 002053 499 LRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLV 578 (974)
Q Consensus 499 g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~lv 578 (974)
.... +.. .++
T Consensus 126 a~~~---------------------------------------------------------------------~~~-~~~ 135 (269)
T 4b93_B 126 ACQQ---------------------------------------------------------------------GHF-QVV 135 (269)
T ss_dssp HHHH---------------------------------------------------------------------TCH-HHH
T ss_pred cccc---------------------------------------------------------------------ChH-HHH
Confidence 1100 000 167
Q ss_pred HHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 002053 579 QKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALS 658 (974)
Q Consensus 579 k~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~~~ 658 (974)
+.|++.|+++|.+|..|+||||+||..|+.++|++||++|+++|.+|..|+||||+||..|+.++|++||++||+++.
T Consensus 136 ~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~-- 213 (269)
T 4b93_B 136 KCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQV-- 213 (269)
T ss_dssp HHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCC--
T ss_pred HHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC--
Confidence 888999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCCCCCHHHHHHHcCc-HHHHHHHHHcC
Q 002053 659 DPTPKYPSGRTPADLASSIGH-KGIAGYLAESD 690 (974)
Q Consensus 659 d~~~kD~~G~TPLhlAa~~G~-~eiv~lLLe~G 690 (974)
+|..|+||||+|+.+|+ .+++++|...+
T Consensus 214 ----~d~~G~TpL~~A~~~~~i~~lL~~l~~~~ 242 (269)
T 4b93_B 214 ----LNKRQRTAVDCAEQNSKIMELLQVVPSCV 242 (269)
T ss_dssp ----CCTTSCCSGGGSCTTCHHHHHTTC-----
T ss_pred ----cCCCCCCHHHHHHhCCcHHHHHHHHHHhc
Confidence 67899999999998886 34444444433
No 30
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.96 E-value=5.6e-28 Score=264.76 Aligned_cols=251 Identities=15% Similarity=0.107 Sum_probs=210.0
Q ss_pred cccchhHHHhcCCchHHHHHHHC-CCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchhh-
Q 002053 420 EAENCKWSCMFGEIEVPAEIVAG-GVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSE- 497 (974)
Q Consensus 420 ~~t~l~~Ac~fG~ieVV~~LL~~-Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL~- 497 (974)
..+++++||..|+.++++.||.. |++++ ..+..|.||||+||.+|+ .+++ ++|+++|++++.+|..|.||||
T Consensus 24 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~--~~d~~g~t~L~~A~~~g~--~~~v--~~Ll~~g~~~~~~~~~g~t~L~~ 97 (351)
T 3utm_A 24 KKDELLEAARSGNEEKLMALLTPLNVNCH--ASDGRKSTPLHLAAGYNR--VRIV--QLLLQHGADVHAKDKGGLVPLHN 97 (351)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCCTTTTTCC--CSSTTCCCHHHHHHHTTC--HHHH--HHHHHTTCCTTCCCTTCCCHHHH
T ss_pred cchhHHHHHHcCCHHHHHHHHHhcCCCcc--cCCCCCCCHHHHHHHcCC--HHHH--HHHHHcCCCCCccCCCCCcHHHH
Confidence 34789999999999999888876 78777 678889999999999999 8888 9999999999999999999999
Q ss_pred ---hhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhH
Q 002053 498 ---NLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQ 574 (974)
Q Consensus 498 ---~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~ 574 (974)
.++.+++++|+..+......+ ..++++|+.++..+ ..
T Consensus 98 A~~~g~~~iv~~Ll~~g~~~~~~~---------------------~~g~t~L~~A~~~~-------------------~~ 137 (351)
T 3utm_A 98 ACSYGHYEVTELLLKHGACVNAMD---------------------LWQFTPLHEAASKN-------------------RV 137 (351)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCC---------------------TTCCCHHHHHHHTT-------------------CH
T ss_pred HHHCCCHHHHHHHHHCCCCCCCCC---------------------CCCCCHHHHHHHcC-------------------CH
Confidence 578999999987655433221 45666776555422 22
Q ss_pred HHHHHHHHhCCCCCCcccCCCCcHHHHH---------------------HHcCCHhHHHHHHhCCCcccccCCCCCcHHH
Q 002053 575 VWLVQKAAEGGKGPCVLDHCGQGVLHFA---------------------AALGYDWALEPTTVAGVNINFRDVNGWTALH 633 (974)
Q Consensus 575 ~~lvk~LL~~Gad~n~~D~~G~TpLH~A---------------------a~~G~~eiVklLL~~GAdvn~~D~~G~TpLH 633 (974)
+ +++.|+++|++++..+..|.||+|+| +..+..+.++.++..+......+..|+||||
T Consensus 138 ~-~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~ 216 (351)
T 3utm_A 138 E-VCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALH 216 (351)
T ss_dssp H-HHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHH
T ss_pred H-HHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHH
Confidence 2 88999999999999999999998764 5667777787787777666667889999999
Q ss_pred HHHHc---CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHH
Q 002053 634 WAAYC---GRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEV 710 (974)
Q Consensus 634 ~Aa~~---G~~eiV~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~ 710 (974)
+|+.. +..+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++| ++++.+|..|+||+.
T Consensus 217 ~A~~~~~~~~~~~~~~Ll~~g~~~~~------~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----a~~n~~d~~g~t~L~ 285 (351)
T 3utm_A 217 CAVASLHPKRKQVAELLLRKGANVNE------KNKDFMTPLHVAAERAHNDVMEVLHKHG-----AKMNALDSLGQTALH 285 (351)
T ss_dssp HHHHCCSTTHHHHHHHHHHTTCCTTC------CCTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHH
T ss_pred HHHHHhCccHHHHHHHHHHcCCCcCC------cCCCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCCcCCCCCCHHH
Confidence 99999 557999999999999887 6689999999999999999999999988 999999999999997
Q ss_pred hhh-----hhhhcccccCCCCCC
Q 002053 711 TGA-----TAVQTVPQRCPTPVS 728 (974)
Q Consensus 711 ~a~-----~~~~~l~er~a~~~~ 728 (974)
.|. ..++.+++.++.+..
T Consensus 286 ~A~~~~~~~~v~~Ll~~gad~~~ 308 (351)
T 3utm_A 286 RAALAGHLQTCRLLLSYGSDPSI 308 (351)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHcCcHHHHHHHHHcCCCCCC
Confidence 765 456777777775443
No 31
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.96 E-value=2.8e-29 Score=280.17 Aligned_cols=211 Identities=15% Similarity=0.079 Sum_probs=179.8
Q ss_pred CCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchhh----hhHHHHHHHHhhcCCCCCCCCCCChhhh
Q 002053 450 SSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSE----NLRMQFGKLLCLTSVSTPNYDPSNLSDI 525 (974)
Q Consensus 450 ~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL~----~g~~~ivkLLl~g~~~~~~~~~~~~~~~ 525 (974)
..+..|+||||+||..|+ .+++ ++|++.|+++|..|..|.|||| .++.+++++|+..+.....
T Consensus 15 ~~d~~g~t~L~~Aa~~g~--~~~v--~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--------- 81 (364)
T 3ljn_A 15 KSDDENMEKIHVAARKGQ--TDEV--RRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--------- 81 (364)
T ss_dssp -CCHHHHHHHHHHHHHTC--HHHH--HHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC---------
T ss_pred ccCCCCCCHHHHHHHcCC--HHHH--HHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc---------
Confidence 457789999999999999 8888 9999999999999999999999 5789999999876652211
Q ss_pred HHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHHhC----CCCCCc-----------
Q 002053 526 SQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEG----GKGPCV----------- 590 (974)
Q Consensus 526 ~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~lvk~LL~~----Gad~n~----------- 590 (974)
.+++++|+.++..+. .+ +++.|++. |++++.
T Consensus 82 --------------~~g~t~L~~A~~~g~-------------------~~-~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 127 (364)
T 3ljn_A 82 --------------WHGQKPIHLAVMANK-------------------TD-LVVALVEGAKERGQMPESLLNECDEREVN 127 (364)
T ss_dssp --------------BTTBCHHHHHHHTTC-------------------HH-HHHHHHHHHHHHTCCHHHHHTCCCCCCEE
T ss_pred --------------cCCCCHHHHHHHcCC-------------------HH-HHHHHHHhccccCCCHHHHHhhcchHhhh
Confidence 245666665554332 11 66677776 888777
Q ss_pred ------ccCCCCcHHHHHHHcC--CHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC
Q 002053 591 ------LDHCGQGVLHFAAALG--YDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTP 662 (974)
Q Consensus 591 ------~D~~G~TpLH~Aa~~G--~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~~~d~~~ 662 (974)
.|..|.||||+||..| +.++|++|+++|++++.+|..|+||||+||..|+.++|++|+++|++.... +++.
T Consensus 128 ~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~-~~~~ 206 (364)
T 3ljn_A 128 EIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSL-RLDY 206 (364)
T ss_dssp EETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSC-CTTC
T ss_pred hhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccc-cccc
Confidence 8999999999999999 999999999999999999999999999999999999999999999982221 1344
Q ss_pred CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHHhhh
Q 002053 663 KYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGA 713 (974)
Q Consensus 663 kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~a~ 713 (974)
+|..|+||||+|+..|+.++|++|+++| ++++.+|..|.||+..|.
T Consensus 207 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----ad~~~~d~~g~tpL~~A~ 252 (364)
T 3ljn_A 207 ANKQGNSHLHWAILINWEDVAMRFVEMG-----IDVNMEDNEHTVPLYLSV 252 (364)
T ss_dssp CCTTCCCTTHHHHTTTCHHHHHHHHTTT-----CCTTCCCTTSCCHHHHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcC-----CCCCCCCCCCCCHHHHHH
Confidence 7799999999999999999999999988 999999999999997765
No 32
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.96 E-value=4.7e-28 Score=246.36 Aligned_cols=189 Identities=20% Similarity=0.138 Sum_probs=167.7
Q ss_pred cccchhHHHhcCCchHHHHHHHCCC-CcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchhhh
Q 002053 420 EAENCKWSCMFGEIEVPAEIVAGGV-LRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN 498 (974)
Q Consensus 420 ~~t~l~~Ac~fG~ieVV~~LL~~Ga-~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL~~ 498 (974)
..+++++||..|+.++++.||..+. +++ ..+..|.||||+||.+|+ .+++ ++|+++|++++..|..|.||++.
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~--~~~~~g~t~L~~A~~~~~--~~~v--~~Ll~~g~~~~~~~~~g~t~l~~ 78 (201)
T 3hra_A 5 EVGALLEAANQRDTKKVKEILQDTTYQVD--EVDTEGNTPLNIAVHNND--IEIA--KALIDRGADINLQNSISDSPYLY 78 (201)
T ss_dssp CTTHHHHHHHTTCHHHHHHHHTCTTCCTT--CCCTTSCCHHHHHHHHTC--HHHH--HHHHHTTCCTTCCCTTSCCHHHH
T ss_pred cccHHHHHHHhccHHHHHHHHHcCCCCCC--CCCCCCCCHHHHHHHcCC--HHHH--HHHHHcCCCCCCCCCCCCCHHHH
Confidence 3478999999999999999999886 777 677889999999999999 8888 99999999999999999999873
Q ss_pred hHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHHH
Q 002053 499 LRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLV 578 (974)
Q Consensus 499 g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~lv 578 (974)
... . +.. .++
T Consensus 79 A~~--------------------------------------------------~-------------------~~~-~~~ 88 (201)
T 3hra_A 79 AGA--------------------------------------------------Q-------------------GRT-EIL 88 (201)
T ss_dssp HHH--------------------------------------------------T-------------------TCH-HHH
T ss_pred HHH--------------------------------------------------c-------------------CCH-HHH
Confidence 100 0 000 156
Q ss_pred HHHH-hCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCC-CcccccCCCCCcHHHHHHHcCC-----HHHHHHHHHcC
Q 002053 579 QKAA-EGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAG-VNINFRDVNGWTALHWAAYCGR-----ERTVASLIALG 651 (974)
Q Consensus 579 k~LL-~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~G-Advn~~D~~G~TpLH~Aa~~G~-----~eiV~lLL~~G 651 (974)
+.|+ ..|++++..|..|.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..+. .+++++|+++|
T Consensus 89 ~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~g 168 (201)
T 3hra_A 89 AYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENG 168 (201)
T ss_dssp HHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTT
T ss_pred HHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCC
Confidence 6666 677899999999999999999999999999999999 9999999999999999999998 99999999999
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 002053 652 AAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 690 (974)
Q Consensus 652 Ad~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~G 690 (974)
++++. +|..|.||||+|+..|+.+++++|+++|
T Consensus 169 a~~~~------~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 169 ADQSI------KDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp CCTTC------CCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred CCCCc------cCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 99887 6689999999999999999999999876
No 33
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.95 E-value=1.5e-28 Score=267.07 Aligned_cols=198 Identities=10% Similarity=-0.039 Sum_probs=160.9
Q ss_pred cccccccchhHHHhcCCchHHHHHHHCCCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCch
Q 002053 416 MSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDIT 495 (974)
Q Consensus 416 ~~~~~~t~l~~Ac~fG~ieVV~~LL~~Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~Tp 495 (974)
.+..+.||+++||..|+.+++++|++.|++++. . +|+||||+||..|+ .+++ ++|+++|++++.+|..|.||
T Consensus 27 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~--~g~t~L~~A~~~g~--~~~v--~~Ll~~ga~~~~~d~~g~t~ 98 (285)
T 3kea_A 27 ADVHGHSASYYAIADNNVRLVCTLLNAGALKNL--L--ENEFPLHQAATLED--TKIV--KILLFSGLDDSQFDDKGNTA 98 (285)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSC--C--TTCCHHHHHTTSSS--CHHH--HHHHHTTCCTTCCCTTSCCH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC--C--CCCCHHHHHHHcCC--HHHH--HHHHHCCCCCCCcCCCCCcH
Confidence 344456888899999999999999998888773 2 48899999998888 7777 88888888888888888888
Q ss_pred hhhhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHH
Q 002053 496 SENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQV 575 (974)
Q Consensus 496 L~~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~ 575 (974)
||.. +..+ ..
T Consensus 99 L~~A--------------------------------------------------~~~g-------------------~~- 108 (285)
T 3kea_A 99 LYYA--------------------------------------------------VDSG-------------------NM- 108 (285)
T ss_dssp HHHH--------------------------------------------------HHTT-------------------CH-
T ss_pred HHHH--------------------------------------------------HHcC-------------------CH-
Confidence 8721 0000 00
Q ss_pred HHHHHHHhCCCCCCcccCCC-CcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q 002053 576 WLVQKAAEGGKGPCVLDHCG-QGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAP 654 (974)
Q Consensus 576 ~lvk~LL~~Gad~n~~D~~G-~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~ 654 (974)
.++++|+++|++++.+|..| .||||+|+..|+.+++++|+++|+++... ..|+||||+|+..|+.++|++|+++|+++
T Consensus 109 ~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~ 187 (285)
T 3kea_A 109 QTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTST 187 (285)
T ss_dssp HHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCC
Confidence 16778888899999999988 79999999999999999999999877322 27899999999999999999999999988
Q ss_pred CCCCCCCCCCCCCCCH-HHHHHHcCcHHHHHHHHHcCCCCcccCCcccCC
Q 002053 655 GALSDPTPKYPSGRTP-ADLASSIGHKGIAGYLAESDLSSALSAISLNKK 703 (974)
Q Consensus 655 n~~~d~~~kD~~G~TP-LhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~ 703 (974)
+. +|..|+|| ||+|+..|+.+++++|+++| ++++.+|.
T Consensus 188 n~------~~~~g~t~~L~~A~~~~~~~~v~~Ll~~g-----ad~~~~~~ 226 (285)
T 3kea_A 188 NT------NNSLLFIPDIKLAIDNKDIEMLQALFKYD-----INIYSANL 226 (285)
T ss_dssp CT------TCCCBCCTTHHHHHHHTCHHHHHHHTTSC-----BCSTTTTG
T ss_pred Cc------ccCCCCChHHHHHHHcCCHHHHHHHHHcC-----CCCCCCCh
Confidence 77 56889997 99999999999999999887 88888774
No 34
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.95 E-value=1.9e-28 Score=259.85 Aligned_cols=205 Identities=14% Similarity=0.014 Sum_probs=164.1
Q ss_pred ccchhHHHhcCCch----HHHHHHHCCCCcCCCC----CCCCCChhHHHHHhc---CCCccchhhhhhhhcCCCCCcccc
Q 002053 421 AENCKWSCMFGEIE----VPAEIVAGGVLRCHTS----SQKVGRVPFYVTCSN---RLSCSEVREFEYRASHIPDVDVAD 489 (974)
Q Consensus 421 ~t~l~~Ac~fG~ie----VV~~LL~~Ga~i~~~~----~~~~G~TPLhvA~~n---g~~~seVv~feyLl~~GAdvna~D 489 (974)
.|++++||..|+.+ ++++|++.|++++ . .+..|+||||+||.+ |+ .+++ ++|++.|++++..+
T Consensus 3 ~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~--~~~~~~d~~g~t~L~~A~~~~~~g~--~~~v--~~Ll~~g~~~~~~~ 76 (256)
T 2etb_A 3 RDRLFSVVSRGVPEELTGLLEYLRWNSKYLT--DSAYTEGSTGKTCLMKAVLNLQDGV--NACI--MPLLQIDKDSGNPK 76 (256)
T ss_dssp HHHHHHHHHHTCGGGGTTHHHHHHHHTCCTT--SGGGSBTTTTBCHHHHHHHTCBTTB--CTTH--HHHHHHHHHTTCSS
T ss_pred ccHHHHHHHcCCHHHHHHHHHHHHHcCCCcc--cccccCCCCCCCHHHHHHHccccch--HHHH--HHHHhcCCcccchh
Confidence 37899999999997 5577777999888 5 678999999999999 88 8888 99999998877543
Q ss_pred CCCCchhhhhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHH
Q 002053 490 NCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLL 569 (974)
Q Consensus 490 ~~G~TpL~~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~ 569 (974)
. + + . .... ..+..++++|+.++..+.
T Consensus 77 ~-----~----------~-~-~~~~----------------------~~d~~g~t~L~~A~~~g~--------------- 102 (256)
T 2etb_A 77 P-----L----------V-N-AQCT----------------------DEFYQGHSALHIAIEKRS--------------- 102 (256)
T ss_dssp C-----G----------G-G-CCCC----------------------STTTTTCCHHHHHHHTTC---------------
T ss_pred h-----h----------c-c-cccc----------------------cccccCCCHHHHHHHcCC---------------
Confidence 1 0 0 0 0000 001235555554443221
Q ss_pred HHhhHHHHHHHHHhCCCCCCcccCC-------------CCcHHHHHHHcCCHhHHHHHHh---CCCcccccCCCCCcHHH
Q 002053 570 KEKLQVWLVQKAAEGGKGPCVLDHC-------------GQGVLHFAAALGYDWALEPTTV---AGVNINFRDVNGWTALH 633 (974)
Q Consensus 570 ~~~l~~~lvk~LL~~Gad~n~~D~~-------------G~TpLH~Aa~~G~~eiVklLL~---~GAdvn~~D~~G~TpLH 633 (974)
.+ ++++|++.|+++|.+|.. |.||||+||..|+.++|++|++ +|+++|.+|..|+||||
T Consensus 103 ----~~-~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh 177 (256)
T 2etb_A 103 ----LQ-CVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLH 177 (256)
T ss_dssp ----HH-HHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHH
T ss_pred ----HH-HHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHH
Confidence 22 788899999999999876 9999999999999999999999 99999999999999999
Q ss_pred HHHH--cCCHH-------HHHHHHHcCCCCCCCCCC-CCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 002053 634 WAAY--CGRER-------TVASLIALGAAPGALSDP-TPKYPSGRTPADLASSIGHKGIAGYLAESD 690 (974)
Q Consensus 634 ~Aa~--~G~~e-------iV~lLL~~GAd~n~~~d~-~~kD~~G~TPLhlAa~~G~~eiv~lLLe~G 690 (974)
+||. .++.+ +|++|+++|++++..... +.+|..|+||||+|+..|+.+++++|+++|
T Consensus 178 ~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g 244 (256)
T 2etb_A 178 ALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQRE 244 (256)
T ss_dssp HHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCC
Confidence 9999 88888 999999999998321100 237799999999999999999999999988
No 35
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.95 E-value=1.6e-27 Score=247.62 Aligned_cols=205 Identities=17% Similarity=0.134 Sum_probs=177.0
Q ss_pred CCChhHHHHHhcCCCccchhhhhhhhcCCC-CCccccCCCCchhh----hhHHHHHHHHhhcCCCCCCCCCCChhhhHHh
Q 002053 454 VGRVPFYVTCSNRLSCSEVREFEYRASHIP-DVDVADNCGDITSE----NLRMQFGKLLCLTSVSTPNYDPSNLSDISQL 528 (974)
Q Consensus 454 ~G~TPLhvA~~ng~~~seVv~feyLl~~GA-dvna~D~~G~TpL~----~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l 528 (974)
.+.+|||.||..|+ .+++ ++|+..+. .++..|..|.|||+ .++.+++++|+..+......+
T Consensus 5 ~~~~~l~~A~~~g~--~~~v--~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~---------- 70 (231)
T 3aji_A 5 VSNIMICNLAYSGK--LDEL--KERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKD---------- 70 (231)
T ss_dssp CSSSHHHHHHHHTC--HHHH--HHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC----------
T ss_pred cccchHHHHHHhCC--HHHH--HHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcC----------
Confidence 47799999999998 6776 77777654 57888999999999 577899999887654433221
Q ss_pred HHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCH
Q 002053 529 NSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYD 608 (974)
Q Consensus 529 ~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~ 608 (974)
..++++|+.++..+ ..+ +++.|++.|++++.+|..|.||||+|+..|+.
T Consensus 71 -----------~~g~t~L~~A~~~~-------------------~~~-~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 119 (231)
T 3aji_A 71 -----------DAGWSPLHIAASAG-------------------XDE-IVKALLVKGAHVNAVNQNGCTPLHYAASKNRH 119 (231)
T ss_dssp -----------TTSCCHHHHHHHHT-------------------CHH-HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred -----------CCCCCHHHHHHHcC-------------------HHH-HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 45667776554422 222 78999999999999999999999999999999
Q ss_pred hHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHH
Q 002053 609 WALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAE 688 (974)
Q Consensus 609 eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe 688 (974)
+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|++
T Consensus 120 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~ 193 (231)
T 3aji_A 120 EIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNI------QDTEGNTPLHLACDEERVEEAKFLVT 193 (231)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC------CCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccc------cCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999877 66899999999999999999999999
Q ss_pred cCCCCcccCCcccCCCCCCHHHhhhh
Q 002053 689 SDLSSALSAISLNKKDGDVAEVTGAT 714 (974)
Q Consensus 689 ~Gl~~h~adln~~d~~G~T~l~~a~~ 714 (974)
+| ++++.+|..|.||+..+..
T Consensus 194 ~g-----a~~~~~~~~g~t~l~~A~~ 214 (231)
T 3aji_A 194 QG-----ASIYIENKEEKTPLQVAKG 214 (231)
T ss_dssp TT-----CCSCCCCTTSCCHHHHSCH
T ss_pred CC-----CCCCCCCCCCCCHHHHHHh
Confidence 88 9999999999999987743
No 36
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.95 E-value=3.7e-28 Score=253.35 Aligned_cols=190 Identities=19% Similarity=0.112 Sum_probs=165.5
Q ss_pred ccccchhHHHhcCCchHHHHHHHCCCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCC----CCccccCCCCc
Q 002053 419 QEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIP----DVDVADNCGDI 494 (974)
Q Consensus 419 ~~~t~l~~Ac~fG~ieVV~~LL~~Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GA----dvna~D~~G~T 494 (974)
.+.||+++||..|+.+++++|++.|++++ ..+..|.||||+||..++ .+++ ++|++.++ +++..|..|.|
T Consensus 45 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~g~t~l~~A~~~~~--~~~~--~~Ll~~~~~~~~~~~~~~~~g~t 118 (241)
T 1k1a_A 45 LRQTPLHLAVITTLPSVVRLLVTAGASPM--ALDRHGQTAAHLACEHRS--PTCL--RALLDSAAPGTLDLEARNYDGLT 118 (241)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHTTC--HHHH--HHHHHHSCTTSCCTTCCCTTSCC
T ss_pred cCCCHHHHHHHcCCHHHHHHHHHcCCCcc--ccCCCCCCHHHHHHHcCC--HHHH--HHHHHcCCCccccccccCcCCCc
Confidence 35689999999999999999999999888 678899999999999999 7887 99999887 77888877888
Q ss_pred hhhhhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhH
Q 002053 495 TSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQ 574 (974)
Q Consensus 495 pL~~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~ 574 (974)
|++.. +. .+..
T Consensus 119 ~L~~A--------------------------------------------------~~-------------------~~~~ 129 (241)
T 1k1a_A 119 ALHVA--------------------------------------------------VN-------------------TECQ 129 (241)
T ss_dssp HHHHH--------------------------------------------------HH-------------------HTCH
T ss_pred HHHHH--------------------------------------------------HH-------------------cCCH
Confidence 77621 10 0011
Q ss_pred HHHHHHHHhCCCCCCccc-CCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 002053 575 VWLVQKAAEGGKGPCVLD-HCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 653 (974)
Q Consensus 575 ~~lvk~LL~~Gad~n~~D-~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd 653 (974)
.+++.|++.|++++..+ ..|.||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 130 -~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 208 (241)
T 1k1a_A 130 -ETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGAD 208 (241)
T ss_dssp -HHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred -HHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Confidence 17888999999999999 8899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 002053 654 PGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 690 (974)
Q Consensus 654 ~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~G 690 (974)
++. +|..|.||||+|+..|+.++++.|++.+
T Consensus 209 ~~~------~~~~g~tpl~~A~~~~~~~i~~~l~~~~ 239 (241)
T 1k1a_A 209 SSL------KNCHNDTPLMVARSRRVIDILRGKATRP 239 (241)
T ss_dssp TTC------CCTTSCCTTTTCSSHHHHHHHTC-----
T ss_pred CCC------cCCCCCCHHHHHHhcCcHHHHhhhccCC
Confidence 877 6689999999999999999999999876
No 37
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.95 E-value=2.9e-28 Score=261.19 Aligned_cols=222 Identities=15% Similarity=0.080 Sum_probs=163.2
Q ss_pred ccccchhHHHhcCCchHHHHHHH----CCCCcCCC--CCCCCCChhHHHHHhc---CCCccchhhhhhhhcCCCCCcccc
Q 002053 419 QEAENCKWSCMFGEIEVPAEIVA----GGVLRCHT--SSQKVGRVPFYVTCSN---RLSCSEVREFEYRASHIPDVDVAD 489 (974)
Q Consensus 419 ~~~t~l~~Ac~fG~ieVV~~LL~----~Ga~i~~~--~~~~~G~TPLhvA~~n---g~~~seVv~feyLl~~GAdvna~D 489 (974)
...+++++||..|++++|+.||+ .|++++.. ..+..|+||||+||.+ |+ .+++ ++|++.|++++..
T Consensus 12 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~--~~~v--~~Ll~~ga~~~~~- 86 (273)
T 2pnn_A 12 YDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQ--NDTI--ALLLDVARKTDSL- 86 (273)
T ss_dssp CCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTB--CHHH--HHHHHHHHHTTCH-
T ss_pred ccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCC--hHHH--HHHHHhhccccch-
Confidence 34589999999999999998887 56655421 2367899999999986 77 7888 9999988764321
Q ss_pred CCCCchhhhhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHH
Q 002053 490 NCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLL 569 (974)
Q Consensus 490 ~~G~TpL~~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~ 569 (974)
+.++... .. ..+..++++|+.++..+.
T Consensus 87 ---------------~~~i~~~-~~----------------------~~d~~g~tpL~~A~~~g~--------------- 113 (273)
T 2pnn_A 87 ---------------KQFVNAS-YT----------------------DSYYKGQTALHIAIERRN--------------- 113 (273)
T ss_dssp ---------------HHHHTCC-CC----------------------STTTTTCCHHHHHHHTTC---------------
T ss_pred ---------------hHHhhcc-cc----------------------cccCCCCCHHHHHHHcCC---------------
Confidence 0011000 00 001245555554443221
Q ss_pred HHhhHHHHHHHHHhCCCCCCcccC--------------CCCcHHHHHHHcCCHhHHHHHHh---CCCcccccCCCCCcHH
Q 002053 570 KEKLQVWLVQKAAEGGKGPCVLDH--------------CGQGVLHFAAALGYDWALEPTTV---AGVNINFRDVNGWTAL 632 (974)
Q Consensus 570 ~~~l~~~lvk~LL~~Gad~n~~D~--------------~G~TpLH~Aa~~G~~eiVklLL~---~GAdvn~~D~~G~TpL 632 (974)
.+ ++++|++.|++++.++. .|.||||+||..|+.++|++|++ +|+++|.+|..|+|||
T Consensus 114 ----~~-~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpL 188 (273)
T 2pnn_A 114 ----MT-LVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVL 188 (273)
T ss_dssp ----HH-HHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHH
T ss_pred ----HH-HHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHH
Confidence 12 78888889999998887 79999999999999999999999 9999999999999999
Q ss_pred HHHHHcCC---------HHHHHHHHHcCCCCCCCC-CCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccc-CCccc
Q 002053 633 HWAAYCGR---------ERTVASLIALGAAPGALS-DPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALS-AISLN 701 (974)
Q Consensus 633 H~Aa~~G~---------~eiV~lLL~~GAd~n~~~-d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~a-dln~~ 701 (974)
|+||..|+ .+++++|+++|++++... .++.+|..|+||||+|+..|+.+++++|+++| + |+...
T Consensus 189 h~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g-----a~dp~~~ 263 (273)
T 2pnn_A 189 HALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQRE-----IHEPECR 263 (273)
T ss_dssp HHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH-----TC-----
T ss_pred HHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCC-----CCCchhh
Confidence 99999998 899999999999987421 01236799999999999999999999999998 5 66666
Q ss_pred CCCCCCH
Q 002053 702 KKDGDVA 708 (974)
Q Consensus 702 d~~G~T~ 708 (974)
...+.+|
T Consensus 264 ~~~~~~~ 270 (273)
T 2pnn_A 264 HAAAHHH 270 (273)
T ss_dssp -------
T ss_pred hhhhhhc
Confidence 6555543
No 38
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.95 E-value=3.1e-27 Score=251.74 Aligned_cols=195 Identities=15% Similarity=0.126 Sum_probs=166.9
Q ss_pred CCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCC---CccccCCCCchhhhhHHHHHHHHhhcCCCCCCCCCCChhhhH
Q 002053 450 SSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPD---VDVADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDIS 526 (974)
Q Consensus 450 ~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAd---vna~D~~G~TpL~~g~~~ivkLLl~g~~~~~~~~~~~~~~~~ 526 (974)
..+..|+||||+||..|+ .+++ ++|++.|++ +|.+|..|.||||...
T Consensus 4 ~~d~~g~t~L~~A~~~g~--~~~v--~~Ll~~g~~~~~~~~~~~~g~t~L~~A~-------------------------- 53 (282)
T 1oy3_D 4 YVTEDGDTALHLAVIHQH--EPFL--DFLLGFSAGHEYLDLQNDLGQTALHLAA-------------------------- 53 (282)
T ss_dssp CCCTTCCCHHHHHHHTTC--HHHH--HHHHHHHTTSGGGGCCCTTSCCHHHHHH--------------------------
T ss_pred ccCCCCCcHHHHHHHcCC--HHHH--HHHHhcCCCcccccccCCCCCCHHHHHH--------------------------
Confidence 457889999999999999 8887 999999998 7888888888887311
Q ss_pred HhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcC
Q 002053 527 QLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALG 606 (974)
Q Consensus 527 ~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G 606 (974)
.. +.. .+++.|+++|++++.+|..|+||||+|+..|
T Consensus 54 ------------------------~~-------------------g~~-~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~ 89 (282)
T 1oy3_D 54 ------------------------IL-------------------GEA-STVEKLYAAGAGVLVAERGGHTALHLACRVR 89 (282)
T ss_dssp ------------------------HH-------------------TCH-HHHHHHHHTTCCSSCCCTTSCCHHHHHTTTT
T ss_pred ------------------------Hc-------------------CCH-HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 00 001 1788899999999999999999999999999
Q ss_pred CHhHHHHHHhCCCc-----------------------------------------------ccccCCCCCcHHHHHHHcC
Q 002053 607 YDWALEPTTVAGVN-----------------------------------------------INFRDVNGWTALHWAAYCG 639 (974)
Q Consensus 607 ~~eiVklLL~~GAd-----------------------------------------------vn~~D~~G~TpLH~Aa~~G 639 (974)
+.+++++|+++|++ ++.+|..|+||||+||..|
T Consensus 90 ~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g 169 (282)
T 1oy3_D 90 AHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHK 169 (282)
T ss_dssp CHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTT
T ss_pred CcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcC
Confidence 99999999998755 7888999999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHHhhh-----h
Q 002053 640 RERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGA-----T 714 (974)
Q Consensus 640 ~~eiV~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~a~-----~ 714 (974)
+.++|++|+++|++++..+ +..|+||||+|+..|+.+++++|+++| ++++.+|..|+||+..|. .
T Consensus 170 ~~~~v~~Ll~~g~~~~~~~-----~~~g~tpL~~A~~~~~~~~v~~Ll~~g-----ad~~~~d~~g~tpL~~A~~~~~~~ 239 (282)
T 1oy3_D 170 DAEMVRLLRDAGADLNKPE-----PTCGRTPLHLAVEAQAASVLELLLKAG-----ADPTARMYGGRTPLGSALLRPNPI 239 (282)
T ss_dssp CHHHHHHHHHHTCCTTCCC-----TTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHTSSCHH
T ss_pred CHHHHHHHHHcCCCCCCCC-----CCCCcCHHHHHHHcCCHHHHHHHHHcC-----CCCcccccCCCCHHHHHHHcCCcH
Confidence 9999999999999998733 135999999999999999999999988 999999999999998775 4
Q ss_pred hhhcccccCCCCCC
Q 002053 715 AVQTVPQRCPTPVS 728 (974)
Q Consensus 715 ~~~~l~er~a~~~~ 728 (974)
.++.++++++....
T Consensus 240 ~v~~Ll~~ga~~~~ 253 (282)
T 1oy3_D 240 LARLLRAHGAPEPE 253 (282)
T ss_dssp HHHHHHHTTCCCCC
T ss_pred HHHHHHHcCCCcCc
Confidence 56777777776443
No 39
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.95 E-value=8.3e-27 Score=243.24 Aligned_cols=188 Identities=20% Similarity=0.108 Sum_probs=167.3
Q ss_pred ccccchhHHHhcCCchHHHHHHHCCCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCC-CCCccccCCCCchhh
Q 002053 419 QEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHI-PDVDVADNCGDITSE 497 (974)
Q Consensus 419 ~~~t~l~~Ac~fG~ieVV~~LL~~Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~G-Advna~D~~G~TpL~ 497 (974)
.+.+++++||..|+.+++++|++.|++++ ..+..|.||||+||..|+ .+++ ++|++.| ++++..|..|.||++
T Consensus 43 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~--~~~~--~~Ll~~~~~~~~~~~~~g~t~L~ 116 (237)
T 3b7b_A 43 DQRTPLMEAAENNHLEAVKYLIKAGALVD--PKDAEGSTCLHLAAKKGH--YEVV--QYLLSNGQMDVNCQDDGGWTPMI 116 (237)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHTTTCCCC--CCCTTSCCHHHHHHHTTC--HHHH--HHHHTTTCCCTTCCCTTSCCHHH
T ss_pred CCCCHHHHHHHhCCHHHHHHHHhCCCCCC--CCCCCCCcHHHHHHHcCC--HHHH--HHHHhCCCCCcccCCCCCCCHHH
Confidence 35589999999999999999999999888 778899999999999999 8887 9999998 899999888888887
Q ss_pred hhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHH
Q 002053 498 NLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWL 577 (974)
Q Consensus 498 ~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~l 577 (974)
... ..+ .. .+
T Consensus 117 ~A~--------------------------------------------------~~~-------------------~~-~~ 126 (237)
T 3b7b_A 117 WAT--------------------------------------------------EYK-------------------HV-DL 126 (237)
T ss_dssp HHH--------------------------------------------------HTT-------------------CH-HH
T ss_pred HHH--------------------------------------------------HcC-------------------CH-HH
Confidence 210 000 00 16
Q ss_pred HHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 002053 578 VQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGAL 657 (974)
Q Consensus 578 vk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~~ 657 (974)
++.|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.
T Consensus 127 ~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~- 205 (237)
T 3b7b_A 127 VKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTL- 205 (237)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC-
T ss_pred HHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCc-
Confidence 8888999999999999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred CCCCCCCCCCCCHHHHHHHcCcHHHHHHHHH
Q 002053 658 SDPTPKYPSGRTPADLASSIGHKGIAGYLAE 688 (974)
Q Consensus 658 ~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe 688 (974)
+|..|.||||+|+.+|+...+..|++
T Consensus 206 -----~d~~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 206 -----KNKEGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp -----CCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred -----cCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 67999999999999999876666654
No 40
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.94 E-value=7.6e-27 Score=241.73 Aligned_cols=189 Identities=23% Similarity=0.238 Sum_probs=163.3
Q ss_pred ccccccchhHHHhcCCchHHHHHHHCCCCcCCCC-CCCCCChhHHHHHhcCCCccchhhhhhhhcCC--CCCccccCCCC
Q 002053 417 SQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTS-SQKVGRVPFYVTCSNRLSCSEVREFEYRASHI--PDVDVADNCGD 493 (974)
Q Consensus 417 ~~~~~t~l~~Ac~fG~ieVV~~LL~~Ga~i~~~~-~~~~G~TPLhvA~~ng~~~seVv~feyLl~~G--Advna~D~~G~ 493 (974)
+..+.|++++||..|+.+++++|++.|+..+... .+..|.||||+||..|+ .+++ ++|+++| ++++..|..|.
T Consensus 33 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~--~~~~--~~Ll~~g~~~~~~~~~~~g~ 108 (228)
T 2dzn_A 33 DQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGN--LEVV--KSLYDRPLKPDLNKITNQGV 108 (228)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCC--HHHH--HHHHSSSSCCCTTCCCTTCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCC--HHHH--HHHHhCCCCcccccCCcCCC
Confidence 3445689999999999999999999995544335 67899999999999998 7887 9999999 88899888888
Q ss_pred chhhhhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhh
Q 002053 494 ITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKL 573 (974)
Q Consensus 494 TpL~~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l 573 (974)
||+|... .. +.
T Consensus 109 t~L~~A~--------------------------------------------------~~-------------------~~ 119 (228)
T 2dzn_A 109 TCLHLAV--------------------------------------------------GK-------------------KW 119 (228)
T ss_dssp CHHHHHH--------------------------------------------------HT-------------------TC
T ss_pred CHHHHHH--------------------------------------------------Hc-------------------CC
Confidence 8887311 00 00
Q ss_pred HHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCC-CcccccCCCCCcHHHHHHHcCCHHHHHHHH-HcC
Q 002053 574 QVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAG-VNINFRDVNGWTALHWAAYCGRERTVASLI-ALG 651 (974)
Q Consensus 574 ~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~G-Advn~~D~~G~TpLH~Aa~~G~~eiV~lLL-~~G 651 (974)
. .+++.|++.|++++.+|..|.||||+|+..|+.+++++|+++| +++|.+|..|+||||+|+..|+.++|++|+ ++|
T Consensus 120 ~-~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~g 198 (228)
T 2dzn_A 120 F-EVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYG 198 (228)
T ss_dssp H-HHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC
T ss_pred H-hHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcC
Confidence 0 1678889999999999999999999999999999999999999 999999999999999999999999999999 899
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHH
Q 002053 652 AAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAE 688 (974)
Q Consensus 652 Ad~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe 688 (974)
++++. +|..|.||||+|+.. +++++|++
T Consensus 199 a~~~~------~~~~g~t~l~~A~~~---~~~~~l~~ 226 (228)
T 2dzn_A 199 AEYDL------VDNKGAKAEDVALNE---QVKKFFLN 226 (228)
T ss_dssp CCSCC------BCTTSCBGGGGCSST---THHHHHHT
T ss_pred CCCCc------cCCCCCcHHHHHHHH---HHHHHHHh
Confidence 99887 668999999999765 56677764
No 41
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.94 E-value=2e-26 Score=238.78 Aligned_cols=208 Identities=17% Similarity=0.151 Sum_probs=179.4
Q ss_pred CCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchhh----hhHHHHHHHHhhcCCCCCCCCCCChhhhH
Q 002053 451 SQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSE----NLRMQFGKLLCLTSVSTPNYDPSNLSDIS 526 (974)
Q Consensus 451 ~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL~----~g~~~ivkLLl~g~~~~~~~~~~~~~~~~ 526 (974)
.+..|.|||+.||..|+ .+++ ++|++.|++++.+|..|.||++ .++.+++++|+..+.......
T Consensus 5 ~d~~~~~~l~~A~~~g~--~~~~--~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~-------- 72 (240)
T 3eu9_A 5 IDDYSTWDIVKATQYGI--YERC--RELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLG-------- 72 (240)
T ss_dssp CSCGGGCCHHHHHHTTC--HHHH--HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCB--------
T ss_pred cccccchHHHHHHHcCC--hHHH--HHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhc--------
Confidence 46779999999999999 7887 9999999999999999999999 478899999887655432221
Q ss_pred HhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcC
Q 002053 527 QLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALG 606 (974)
Q Consensus 527 ~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G 606 (974)
+..++++|+.++. .+..+ +++.|++.|++++.+|..|.||||+|+..|
T Consensus 73 ------------~~~~~t~L~~A~~-------------------~~~~~-~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 120 (240)
T 3eu9_A 73 ------------GDLNSTPLHWATR-------------------QGHLS-MVVQLMKYGADPSLIDGEGCSCIHLAAQFG 120 (240)
T ss_dssp ------------TTTTBCHHHHHHH-------------------HTCHH-HHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred ------------CCcCCChhHHHHH-------------------cCCHH-HHHHHHHcCCCCcccCCCCCCHHHHHHHcC
Confidence 1235566654443 22222 789999999999999999999999999999
Q ss_pred CHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCC-HHHHHHHHHcCCCCCCCCCCCCCCC-CCCCHHHHHHHcCcHHHHH
Q 002053 607 YDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR-ERTVASLIALGAAPGALSDPTPKYP-SGRTPADLASSIGHKGIAG 684 (974)
Q Consensus 607 ~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~-~eiV~lLL~~GAd~n~~~d~~~kD~-~G~TPLhlAa~~G~~eiv~ 684 (974)
+.+++++|+++|++++.++..|.||||+|+..++ .+++++|++.|++++. ++. .|.||||+|+..|+.++++
T Consensus 121 ~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~------~~~~~g~t~L~~A~~~~~~~~v~ 194 (240)
T 3eu9_A 121 HTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNL------GDKYHKNTALHWAVLAGNTTVIS 194 (240)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTC------CCTTTCCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcch------hhccCCCcHHHHHHHcCCHHHHH
Confidence 9999999999999999999999999999997776 8999999999999987 344 8999999999999999999
Q ss_pred HHHHcCCCCcccCCcccCCCCCCHHHhhh
Q 002053 685 YLAESDLSSALSAISLNKKDGDVAEVTGA 713 (974)
Q Consensus 685 lLLe~Gl~~h~adln~~d~~G~T~l~~a~ 713 (974)
+|+++| ++++.+|..|.||+..|.
T Consensus 195 ~Ll~~g-----~~~~~~~~~g~t~l~~A~ 218 (240)
T 3eu9_A 195 LLLEAG-----ANVDAQNIKGESALDLAK 218 (240)
T ss_dssp HHHHHT-----CCTTCBCTTSCBHHHHHH
T ss_pred HHHHcC-----CCCCCcCCCCCCHHHHHH
Confidence 999988 999999999999997764
No 42
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.94 E-value=2.3e-26 Score=248.22 Aligned_cols=213 Identities=21% Similarity=0.213 Sum_probs=168.3
Q ss_pred ccccccchhHHHhcCCchHHHHHHHCCCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchh
Q 002053 417 SQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITS 496 (974)
Q Consensus 417 ~~~~~t~l~~Ac~fG~ieVV~~LL~~Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL 496 (974)
+..+.|++++||..|+.+++++||+.|++++ .++..|+||||+||.+|+ .+++ ++|+++|++++..|..|.||+
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~--~~~~~g~tpL~~A~~~g~--~~~v--~~Ll~~g~~~~~~~~~g~t~l 143 (299)
T 1s70_B 70 NVDGLTALHQACIDDNVDMVKFLVENGANIN--QPDNEGWIPLHAAASCGY--LDIA--EYLISQGAHVGAVNSEGDTPL 143 (299)
T ss_dssp CTTCCBHHHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHHTC--HHHH--HHHHHTTCCTTCCCTTSCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC--CCCCCCCcHHHHHHHcCC--HHHH--HHHHhCCCCCCCcCCCCCCHH
Confidence 3345689999999999999999999999988 778899999999999999 8888 999999999999999999999
Q ss_pred h----hhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHh
Q 002053 497 E----NLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEK 572 (974)
Q Consensus 497 ~----~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~ 572 (974)
+ .++.++++.|+...... ...... .....+
T Consensus 144 ~~A~~~~~~~~~~~ll~~~~~~----------------------------~~~~~~-----------~~~~~~------- 177 (299)
T 1s70_B 144 DIAEEEAMEELLQNEVNRQGVD----------------------------IEAARK-----------EEERIM------- 177 (299)
T ss_dssp HHCCSHHHHHHHHHHHHHHTCC----------------------------HHHHHH-----------HHHHHH-------
T ss_pred HHHHhcchHHHHHHHHhhcCCC----------------------------chhhhh-----------hhhhHH-------
Confidence 9 46667766654321110 000000 000000
Q ss_pred hHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 002053 573 LQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGA 652 (974)
Q Consensus 573 l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GA 652 (974)
...+..++...+......+..|.||||+||..|+.++|++|+++|+++|.+|..|+||||+|+..|+.++|++|+++|+
T Consensus 178 -~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 256 (299)
T 1s70_B 178 -LRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLC 256 (299)
T ss_dssp -HHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred -HHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCC
Confidence 1112333444555566678899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHc
Q 002053 653 APGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAES 689 (974)
Q Consensus 653 d~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~ 689 (974)
+++. +|..|.||||+|+... .+++..|++.
T Consensus 257 d~~~------~d~~g~t~l~~A~~~~-~~~l~~l~~~ 286 (299)
T 1s70_B 257 DMEA------VNKVGQTAFDVADEDI-LGYLEELQKK 286 (299)
T ss_dssp CTTC------CCTTSCCTTTSCCSGG-GHHHHHHHHH
T ss_pred CCCC------cCCCCCCHHHHHHHHH-HHHHHHHHHH
Confidence 9887 6699999999997654 4445555543
No 43
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.94 E-value=3.6e-27 Score=250.16 Aligned_cols=207 Identities=12% Similarity=-0.019 Sum_probs=160.6
Q ss_pred ccchhHHHhcCCchHHHHHHH----CCCCcCCCCC--CCCCChhHHHHH---hcCCCccchhhhhhhhcCCCCCccccCC
Q 002053 421 AENCKWSCMFGEIEVPAEIVA----GGVLRCHTSS--QKVGRVPFYVTC---SNRLSCSEVREFEYRASHIPDVDVADNC 491 (974)
Q Consensus 421 ~t~l~~Ac~fG~ieVV~~LL~----~Ga~i~~~~~--~~~G~TPLhvA~---~ng~~~seVv~feyLl~~GAdvna~D~~ 491 (974)
.++++.||..|+.++++.|++ .|++++.... +..|+||||+|+ ..|+ .+++ ++|++.|++++...
T Consensus 6 ~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~--~~~v--~~Ll~~g~~~~~~~-- 79 (260)
T 3jxi_A 6 RPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGR--NDTI--PILLDIAEKTGNMR-- 79 (260)
T ss_dssp HHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTB--CTHH--HHHHHHHHHTTCHH--
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCC--HHHH--HHHHHhcccccchH--
Confidence 368999999999996555555 9998873221 267999999999 6687 8888 99999887543320
Q ss_pred CCchhhhhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHH
Q 002053 492 GDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKE 571 (974)
Q Consensus 492 G~TpL~~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~ 571 (974)
.++. ... ...+..++++|+.++..+.
T Consensus 80 -------------~~~~--~~~----------------------~~~d~~g~t~L~~A~~~g~----------------- 105 (260)
T 3jxi_A 80 -------------EFIN--SPF----------------------RDVYYRGQTALHIAIERRC----------------- 105 (260)
T ss_dssp -------------HHHT--CCB----------------------CCSSEESBCHHHHHHHTTC-----------------
T ss_pred -------------hhhc--ccc----------------------cccccCCCCHHHHHHHcCC-----------------
Confidence 0000 000 0001245556654443222
Q ss_pred hhHHHHHHHHHhCCCCCCccc--------------CCCCcHHHHHHHcCCHhHHHHHHh---CCCcccccCCCCCcHHHH
Q 002053 572 KLQVWLVQKAAEGGKGPCVLD--------------HCGQGVLHFAAALGYDWALEPTTV---AGVNINFRDVNGWTALHW 634 (974)
Q Consensus 572 ~l~~~lvk~LL~~Gad~n~~D--------------~~G~TpLH~Aa~~G~~eiVklLL~---~GAdvn~~D~~G~TpLH~ 634 (974)
.+ ++++|++.|+++|.+| ..|+||||+||..|+.++|++|++ +|+++|.+|..|+||||+
T Consensus 106 --~~-~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~ 182 (260)
T 3jxi_A 106 --KH-YVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHA 182 (260)
T ss_dssp --HH-HHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHH
T ss_pred --HH-HHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHH
Confidence 22 7889999999999998 689999999999999999999999 999999999999999999
Q ss_pred HHHcCC---------HHHHHHHHHcCCCCCCCC-CCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 002053 635 AAYCGR---------ERTVASLIALGAAPGALS-DPTPKYPSGRTPADLASSIGHKGIAGYLAESD 690 (974)
Q Consensus 635 Aa~~G~---------~eiV~lLL~~GAd~n~~~-d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~G 690 (974)
||..|+ .+++++|+++|++++... ..+.+|..|+||||+|+..|+.+++++|+++|
T Consensus 183 A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g 248 (260)
T 3jxi_A 183 LVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRRE 248 (260)
T ss_dssp HHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhC
Confidence 999888 799999999999984311 11347799999999999999999999999988
No 44
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.94 E-value=2.3e-26 Score=249.92 Aligned_cols=206 Identities=10% Similarity=-0.004 Sum_probs=172.6
Q ss_pred CCchHHHHHHHCCCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchhhhhHHHHHHHHhhc
Q 002053 431 GEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLRMQFGKLLCLT 510 (974)
Q Consensus 431 G~ieVV~~LL~~Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL~~g~~~ivkLLl~g 510 (974)
...+|.++|...+ ++ ..+..|+||||+||..|+ .+++ ++|+++|+++|..| |.||||..
T Consensus 11 ~~~~v~~lL~~~~--~~--~~d~~g~t~L~~A~~~g~--~~~v--~~Ll~~g~~~~~~~--g~t~L~~A----------- 69 (285)
T 3kea_A 11 KSKQLKSFLSSKD--TF--KADVHGHSASYYAIADNN--VRLV--CTLLNAGALKNLLE--NEFPLHQA----------- 69 (285)
T ss_dssp CHHHHHHHHHSTT--TT--CCCTTSCCHHHHHHHTTC--HHHH--HHHHHTTGGGSCCT--TCCHHHHH-----------
T ss_pred CHHHHHHHHHhCC--CC--ccCCCCCCHHHHHHHcCC--HHHH--HHHHhCCCCCCCCC--CCCHHHHH-----------
Confidence 3445666666654 44 668899999999999999 8888 99999999999874 78888721
Q ss_pred CCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHHhCCCCCCc
Q 002053 511 SVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCV 590 (974)
Q Consensus 511 ~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~lvk~LL~~Gad~n~ 590 (974)
+..+.. .++++|+++|+++|.
T Consensus 70 ---------------------------------------~~~g~~--------------------~~v~~Ll~~ga~~~~ 90 (285)
T 3kea_A 70 ---------------------------------------ATLEDT--------------------KIVKILLFSGLDDSQ 90 (285)
T ss_dssp ---------------------------------------TTSSSC--------------------HHHHHHHHTTCCTTC
T ss_pred ---------------------------------------HHcCCH--------------------HHHHHHHHCCCCCCC
Confidence 100111 168889999999999
Q ss_pred ccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCC-CcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCC
Q 002053 591 LDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNG-WTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRT 669 (974)
Q Consensus 591 ~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G-~TpLH~Aa~~G~~eiV~lLL~~GAd~n~~~d~~~kD~~G~T 669 (974)
+|..|+||||+||..|+.+++++|+++|++++.+|..| .||||+|+..|+.+++++|+++|+++.. ...|.|
T Consensus 91 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-------~~~g~t 163 (285)
T 3kea_A 91 FDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFD-------LAILLS 163 (285)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCC-------CSTHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcccc-------ccCCcc
Confidence 99999999999999999999999999999999999999 7999999999999999999999987632 128999
Q ss_pred HHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCH-HHhhh-----hhhhcccccCCCCCC
Q 002053 670 PADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA-EVTGA-----TAVQTVPQRCPTPVS 728 (974)
Q Consensus 670 PLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~-l~~a~-----~~~~~l~er~a~~~~ 728 (974)
|||+|+..|+.+++++|+++| ++++.+|..|+|| +..|. ..++.+++.++.+..
T Consensus 164 ~L~~A~~~g~~~~v~~Ll~~g-----ad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~ 223 (285)
T 3kea_A 164 CIHITIKNGHVDMMILLLDYM-----TSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYS 223 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHHH-----HHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTT
T ss_pred HHHHHHHcChHHHHHHHHHcC-----CCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 999999999999999999988 9999999999997 76654 456667777665433
No 45
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.94 E-value=2.2e-26 Score=240.92 Aligned_cols=193 Identities=18% Similarity=0.153 Sum_probs=161.0
Q ss_pred CCCCCCChhHHHHHhcCCCccchhhhhhhhcCCC----CCccccCCCCchhhhhHHHHHHHHhhcCCCCCCCCCCChhhh
Q 002053 450 SSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIP----DVDVADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDI 525 (974)
Q Consensus 450 ~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GA----dvna~D~~G~TpL~~g~~~ivkLLl~g~~~~~~~~~~~~~~~ 525 (974)
..+..|.||||+||..|+ .+++ ++|+..++ ++|..|..|.||||...
T Consensus 3 ~~d~~g~t~L~~A~~~g~--~~~v--~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~------------------------- 53 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEE--KALT--MEVIRQVKGDLAFLNFQNNLQQTPLHLAV------------------------- 53 (236)
T ss_dssp ----CCCCTTHHHHHTTC--SSSS--SCCCC-----CCCCCCCCTTCCCHHHHHH-------------------------
T ss_pred cCCCCCCchhHHHHHcCC--hhHH--HHHHHHhhccHHHhhccCCCCCCHHHHHH-------------------------
Confidence 356789999999999999 7887 88887765 78888888888887311
Q ss_pred HHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHc
Q 002053 526 SQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAAL 605 (974)
Q Consensus 526 ~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~ 605 (974)
..+ .. .+++.|++.|++++.+|..|.||||+||..
T Consensus 54 -------------------------~~~-------------------~~-~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 88 (236)
T 1ikn_D 54 -------------------------ITN-------------------QP-EIAEALLGAGCDPELRDFRGNTPLHLACEQ 88 (236)
T ss_dssp -------------------------HTT-------------------CH-HHHHCCCSCCCCSCCCCTTCCCHHHHHHHH
T ss_pred -------------------------HcC-------------------CH-HHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 000 00 168888999999999999999999999999
Q ss_pred CCHhHHHHHHhCCCc------ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCC-CCCCHHHHHHHcC
Q 002053 606 GYDWALEPTTVAGVN------INFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYP-SGRTPADLASSIG 678 (974)
Q Consensus 606 G~~eiVklLL~~GAd------vn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~~~d~~~kD~-~G~TPLhlAa~~G 678 (974)
|+.+++++|+.+|++ ++..+..|+||||+||..|+.++|++|+++|++++. ++. .|.||||+|+..|
T Consensus 89 ~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~~g~tpL~~A~~~~ 162 (236)
T 1ikn_D 89 GCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNA------QEPCNGRTALHLAVDLQ 162 (236)
T ss_dssp TCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTC------CCTTTCCCHHHHHHHTT
T ss_pred CCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------CCCCCCCCHHHHHHHcC
Confidence 999999999999976 678889999999999999999999999999999987 456 8999999999999
Q ss_pred cHHHHHHHHHcCCCCcccCCcccCCCCCCHHHhhh-----hhhhcccccCCCCC
Q 002053 679 HKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGA-----TAVQTVPQRCPTPV 727 (974)
Q Consensus 679 ~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~a~-----~~~~~l~er~a~~~ 727 (974)
+.+++++|+++| ++++.+|..|.||+..+. ..++.+++.++...
T Consensus 163 ~~~~v~~Ll~~g-----a~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 163 NPDLVSLLLKCG-----ADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL 211 (236)
T ss_dssp CHHHHHHHHTTT-----CCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG
T ss_pred CHHHHHHHHHcC-----CCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhh
Confidence 999999999988 999999999999997765 45566677776543
No 46
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.94 E-value=9.8e-26 Score=232.96 Aligned_cols=201 Identities=19% Similarity=0.116 Sum_probs=169.7
Q ss_pred cchhhhhhhhcCCCCCccc-cCCCCchhh----hhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchh
Q 002053 470 SEVREFEYRASHIPDVDVA-DNCGDITSE----NLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWD 544 (974)
Q Consensus 470 seVv~feyLl~~GAdvna~-D~~G~TpL~----~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t 544 (974)
.+++ ++|+++|++++.. |..|.|||| .++.+++++|+..+......+ ..+++
T Consensus 4 ~~~i--~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~---------------------~~g~t 60 (223)
T 2f8y_A 4 PAVI--SDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQD---------------------NMGRT 60 (223)
T ss_dssp -CCE--ETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC---------------------TTSCC
T ss_pred HHHH--HHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcC---------------------CCCCC
Confidence 6677 9999999999876 899999999 578999999887654433221 45666
Q ss_pred HHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHHhCCC-CCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccc
Q 002053 545 LMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGK-GPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINF 623 (974)
Q Consensus 545 ~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~lvk~LL~~Ga-d~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~ 623 (974)
+|+.++..+ ..+ +++.|++.|+ +++..+..|.||||+|+..|+.+++++|+++|++++.
T Consensus 61 ~L~~A~~~~-------------------~~~-~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 120 (223)
T 2f8y_A 61 PLHAAVSAD-------------------AQG-VFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNA 120 (223)
T ss_dssp HHHHHHHTT-------------------CHH-HHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHcC-------------------CHH-HHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcC
Confidence 776555432 222 7888999887 9999999999999999999999999999999999999
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCC
Q 002053 624 RDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKK 703 (974)
Q Consensus 624 ~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~ 703 (974)
+|..|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++| ++++.+|.
T Consensus 121 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~ 189 (223)
T 2f8y_A 121 VDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM------QNNREETPLFLAAREGSYETAKVLLDHF-----ANRDITDH 189 (223)
T ss_dssp BCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTCCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCT
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC------cCCCCcCHHHHHHHcCCHHHHHHHHHcC-----CCCccccc
Confidence 999999999999999999999999999999877 6689999999999999999999999988 99999999
Q ss_pred CCCCHHHhhh-----hhhhcccccCC
Q 002053 704 DGDVAEVTGA-----TAVQTVPQRCP 724 (974)
Q Consensus 704 ~G~T~l~~a~-----~~~~~l~er~a 724 (974)
.|.||+..+. +.++.+++.++
T Consensus 190 ~g~t~l~~A~~~~~~~i~~~L~~~g~ 215 (223)
T 2f8y_A 190 MDRLPRDIAQERMHHDIVRLLDEYNL 215 (223)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred cCCCHHHHHHHhcchHHHHHHHHcCC
Confidence 9999997665 34445555444
No 47
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.94 E-value=2.1e-26 Score=249.40 Aligned_cols=194 Identities=16% Similarity=0.084 Sum_probs=168.4
Q ss_pred cchhHHHhcCCchHHHHHHHCCCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCC-CCccccCCCCchhhhhH
Q 002053 422 ENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIP-DVDVADNCGDITSENLR 500 (974)
Q Consensus 422 t~l~~Ac~fG~ieVV~~LL~~Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GA-dvna~D~~G~TpL~~g~ 500 (974)
+++++|+..|+++.++.++..+++......+..|+||||+||..|+ .+++ ++|++.|+ +++..|..|.||++...
T Consensus 78 ~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~--~~~v--~~Ll~~g~~~~~~~~~~g~tpL~~a~ 153 (276)
T 4hbd_A 78 SDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHAN--FPVV--QQLLDSGVCKVDKQNRAGYSPIMLTA 153 (276)
T ss_dssp TTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTC--HHHH--HHHHHTSCCCTTCCCTTSCCHHHHGG
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCC--HHHH--HHHHHCCCCcCCCCCCCCCCHHHHHH
Confidence 5678999999999999999887762222778899999999999999 8888 99999998 99999999999998321
Q ss_pred HHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHHHHH
Q 002053 501 MQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQK 580 (974)
Q Consensus 501 ~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~lvk~ 580 (974)
. . ..... + ...+++.
T Consensus 154 ~-------~--------------------------------------------~~~~~-------------~-~~~~v~~ 168 (276)
T 4hbd_A 154 L-------A--------------------------------------------TLKTQ-------------D-DIETVLQ 168 (276)
T ss_dssp G-------C--------------------------------------------CCCSH-------------H-HHHHHHH
T ss_pred H-------H--------------------------------------------Hhhhh-------------h-hHHHHHH
Confidence 0 0 00000 0 0116788
Q ss_pred HHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCCCC
Q 002053 581 AAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIA-LGAAPGALSD 659 (974)
Q Consensus 581 LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~-~GAd~n~~~d 659 (974)
|++.|++++..|..|+||||+||..|+.++|++|+++|+++|.+|..|+||||+||..|+.++|++|++ .|++++.
T Consensus 169 Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~--- 245 (276)
T 4hbd_A 169 LFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISL--- 245 (276)
T ss_dssp HHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTC---
T ss_pred HHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcC---
Confidence 889999999999999999999999999999999999999999999999999999999999999999999 8999887
Q ss_pred CCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 002053 660 PTPKYPSGRTPADLASSIGHKGIAGYLAESD 690 (974)
Q Consensus 660 ~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~G 690 (974)
+|..|.||||+|+..|+.+++++|++++
T Consensus 246 ---~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 246 ---TDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp ---CCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred ---cCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 6689999999999999999999999875
No 48
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.93 E-value=9.3e-26 Score=234.90 Aligned_cols=171 Identities=18% Similarity=0.097 Sum_probs=150.9
Q ss_pred CCChhHHHHHhcCCCccchhhhhhhhcC-CCCCccccCCCCchhhh----hHHHHHHHHhhcCCCCCCCCCCChhhhHHh
Q 002053 454 VGRVPFYVTCSNRLSCSEVREFEYRASH-IPDVDVADNCGDITSEN----LRMQFGKLLCLTSVSTPNYDPSNLSDISQL 528 (974)
Q Consensus 454 ~G~TPLhvA~~ng~~~seVv~feyLl~~-GAdvna~D~~G~TpL~~----g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l 528 (974)
.|.||||+||..|+ .+++ ++|+.. |+++|.+|..|.||||. ++.+
T Consensus 2 ~g~t~L~~A~~~g~--~~~v--~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~-------------------------- 51 (232)
T 2rfa_A 2 IWESPLLLAAKEND--VQAL--SKLLKFEGCEVHQRGAMGETALHIAALYDNLE-------------------------- 51 (232)
T ss_dssp CTTCHHHHHHHTTC--HHHH--HHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHH--------------------------
T ss_pred CCCCHHHHHHHcCC--HHHH--HHHHHhcCCCcccCCCCCCCHHHHHHHcCCHH--------------------------
Confidence 48999999999999 7777 999987 99999999999999983 1122
Q ss_pred HHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHHhCCCCC-----CcccCCCCcHHHHHH
Q 002053 529 NSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGP-----CVLDHCGQGVLHFAA 603 (974)
Q Consensus 529 ~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~lvk~LL~~Gad~-----n~~D~~G~TpLH~Aa 603 (974)
+++.|++.|+++ +..|..|.||||+||
T Consensus 52 ------------------------------------------------~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~ 83 (232)
T 2rfa_A 52 ------------------------------------------------AAMVLMEAAPELVFEPMTSELYEGQTALHIAV 83 (232)
T ss_dssp ------------------------------------------------HHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHH
T ss_pred ------------------------------------------------HHHHHHHcCchhccccccccCCCCcCHHHHHH
Confidence 556666666665 677889999999999
Q ss_pred HcCCHhHHHHHHhCCCcccccCC-------------CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCH
Q 002053 604 ALGYDWALEPTTVAGVNINFRDV-------------NGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTP 670 (974)
Q Consensus 604 ~~G~~eiVklLL~~GAdvn~~D~-------------~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~~~d~~~kD~~G~TP 670 (974)
..|+.+++++|+++|++++.++. .|+||||+|+..|+.++|++|+++|++++. +|..|+||
T Consensus 84 ~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~d~~g~t~ 157 (232)
T 2rfa_A 84 INQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRA------QDSLGNTV 157 (232)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTC------CCTTSCCH
T ss_pred HcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC------CCCCCCCH
Confidence 99999999999999999999876 799999999999999999999999999887 66899999
Q ss_pred HHHHHHcCcHHHH----HHHHHcCCCCcccCC------cccCCCCCCHHHhhh
Q 002053 671 ADLASSIGHKGIA----GYLAESDLSSALSAI------SLNKKDGDVAEVTGA 713 (974)
Q Consensus 671 LhlAa~~G~~eiv----~lLLe~Gl~~h~adl------n~~d~~G~T~l~~a~ 713 (974)
||+|+..|+.+++ ++|+++| +++ +.+|..|.||+..|.
T Consensus 158 L~~A~~~~~~~~~~~i~~~Ll~~g-----~~~~~~~~~~~~~~~g~tpl~~A~ 205 (232)
T 2rfa_A 158 LHILILQPNKTFACQMYNLLLSYD-----GGDHLKSLELVPNNQGLTPFKLAG 205 (232)
T ss_dssp HHHHHTCSCHHHHHHHHHHHHHTT-----CSCSSCCGGGCCCTTSCCHHHHHH
T ss_pred HHHHHHcCChHHHHHHHHHHHhcC-----CchhhhhhhccCCCCCCCHHHHHH
Confidence 9999999999988 9999988 665 689999999997764
No 49
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.93 E-value=1.3e-25 Score=227.28 Aligned_cols=148 Identities=26% Similarity=0.313 Sum_probs=132.1
Q ss_pred HHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHH
Q 002053 565 VQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTV 644 (974)
Q Consensus 565 L~~a~~~~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV 644 (974)
|..+++.+..+ +|+.|++.|++||.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+||..|+.++|
T Consensus 8 L~~Aa~~G~~~-~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v 86 (169)
T 4gpm_A 8 LIEAAENGNKD-RVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVV 86 (169)
T ss_dssp HHHHHHTTCHH-HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHcCCHH-HHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHH
Confidence 34455555554 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHHhhh-----hhhhcc
Q 002053 645 ASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGA-----TAVQTV 719 (974)
Q Consensus 645 ~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~a~-----~~~~~l 719 (974)
++||++|+++|. +|..|+||||+|+..|+.++|++|+++| ++++.+|.+|+||+..|. +.++.+
T Consensus 87 ~~Ll~~gadvn~------~d~~G~TpLh~A~~~g~~~~v~~Ll~~g-----ad~~~~d~~G~TpL~~A~~~g~~~iv~~L 155 (169)
T 4gpm_A 87 KLLISKGADVNA------KDSDGRTPLHHAAENGHKEVVKLLISKG-----ADVNTSDSDGRTPLDLAREHGNEEVVKLL 155 (169)
T ss_dssp HHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHCcCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 999999999887 6689999999999999999999999988 999999999999997765 344555
Q ss_pred cccCC
Q 002053 720 PQRCP 724 (974)
Q Consensus 720 ~er~a 724 (974)
+++++
T Consensus 156 l~~GA 160 (169)
T 4gpm_A 156 EKQGG 160 (169)
T ss_dssp HTC--
T ss_pred HHCCC
Confidence 55554
No 50
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.93 E-value=6e-27 Score=259.71 Aligned_cols=224 Identities=14% Similarity=0.034 Sum_probs=158.4
Q ss_pred hcCCchHHHHHHHCCCCcCCCCC-----------C-CCCC---hhHHHHHhcCCCccchhhhhhhhcCCCCCcc-ccCCC
Q 002053 429 MFGEIEVPAEIVAGGVLRCHTSS-----------Q-KVGR---VPFYVTCSNRLSCSEVREFEYRASHIPDVDV-ADNCG 492 (974)
Q Consensus 429 ~fG~ieVV~~LL~~Ga~i~~~~~-----------~-~~G~---TPLhvA~~ng~~~seVv~feyLl~~GAdvna-~D~~G 492 (974)
..|++++|+.||++|++.+.... . ..+. ..+|+|+..+. .+++ ++|+..|+++|. .|..|
T Consensus 56 ~~g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~--~~~~--~~l~~~g~dvn~~~d~~g 131 (327)
T 1sw6_A 56 DNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLL--QEVN--DAFPNTQLNLNIPVDEHG 131 (327)
T ss_dssp CHHHHHHHHHHHHHHHC-------------------------------CHHHHH--HHHH--HHCTTSCCCSCSCCSTTC
T ss_pred cCchhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhH--HHHH--HHHHhcCCCcccccCCCC
Confidence 44999999999999987653111 0 0112 22467776665 6676 899999999999 79999
Q ss_pred Cchhh----hhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHH
Q 002053 493 DITSE----NLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKL 568 (974)
Q Consensus 493 ~TpL~----~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a 568 (974)
.|||| .++.+++++|+..+......+ ..++++|+.++..+...
T Consensus 132 ~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d---------------------~~g~TpLh~A~~~g~~~------------ 178 (327)
T 1sw6_A 132 NTPLHWLTSIANLELVKHLVKHGSNRLYGD---------------------NMGESCLVKAVKSVNNY------------ 178 (327)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTBCC---------------------TTCCCHHHHHHHSSHHH------------
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCCcC---------------------CCCCCHHHHHHHhcccc------------
Confidence 99999 478899999887665443222 56788888766533200
Q ss_pred HHHhhHHHHHHHHHhCC-CCCCcccCCCCcHHHHHHH----cCCHhHHHHHHhC--------------------CCcccc
Q 002053 569 LKEKLQVWLVQKAAEGG-KGPCVLDHCGQGVLHFAAA----LGYDWALEPTTVA--------------------GVNINF 623 (974)
Q Consensus 569 ~~~~l~~~lvk~LL~~G-ad~n~~D~~G~TpLH~Aa~----~G~~eiVklLL~~--------------------GAdvn~ 623 (974)
... +++.|++.+ ++++.+|..|+||||+||. .|+.+++++|++. |++++.
T Consensus 179 -~~~----~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~ 253 (327)
T 1sw6_A 179 -DSG----TFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPND 253 (327)
T ss_dssp -HTT----CHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------
T ss_pred -cHH----HHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCccc
Confidence 001 334444544 6799999999999999999 8999999999886 899999
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCC
Q 002053 624 RDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKK 703 (974)
Q Consensus 624 ~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~ 703 (974)
+|..|+||||+|+. +++|+++ +++. +|..|+||||+|+..|+.++|++|+++| ++++++|.
T Consensus 254 ~~~~g~t~L~~a~~------~~~Ll~~--~~n~------~d~~G~TpLh~A~~~g~~~~v~~Ll~~G-----ad~~~~d~ 314 (327)
T 1sw6_A 254 KNGERKDSILENLD------LKWIIAN--MLNA------QDSNGDTCLNIAARLGNISIVDALLDYG-----ADPFIANK 314 (327)
T ss_dssp ------CHHHHHCS------HHHHHHH--TTTC------CCTTSCCHHHHHHHHCCHHHHHHHHHTT-----CCTTCCCT
T ss_pred ccccCCChhHHHHH------HHHHHHh--CCCC------CCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCcccCC
Confidence 99999999999985 8899988 3444 7799999999999999999999999988 99999999
Q ss_pred CCCCHHHhhh
Q 002053 704 DGDVAEVTGA 713 (974)
Q Consensus 704 ~G~T~l~~a~ 713 (974)
.|+||+..|.
T Consensus 315 ~G~TpL~~A~ 324 (327)
T 1sw6_A 315 SGLRPVDFGA 324 (327)
T ss_dssp TSCCGGGGTC
T ss_pred CCCCHHHHHH
Confidence 9999998764
No 51
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.93 E-value=9.5e-26 Score=224.70 Aligned_cols=121 Identities=26% Similarity=0.261 Sum_probs=103.8
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 002053 577 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA 656 (974)
Q Consensus 577 lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~ 656 (974)
+++.|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++|++|+++|++++.
T Consensus 51 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 130 (172)
T 3v30_A 51 TVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTT 130 (172)
T ss_dssp HHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc
Confidence 45556667788888888999999999999999999999999999999999999999999999999999999999999877
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCH
Q 002053 657 LSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA 708 (974)
Q Consensus 657 ~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~ 708 (974)
+|..|.||||+|+..|+.+++++|+++| +++..++..|.||
T Consensus 131 ------~~~~g~t~l~~A~~~~~~~~~~~L~~~~-----~~~~~~~~~~~~p 171 (172)
T 3v30_A 131 ------EADSGYTPMDLAVALGYRKVQQVIENHI-----LKLFQSNLVPADP 171 (172)
T ss_dssp ------CCTTSCCHHHHHHHHTCHHHHHHHHHHH-----HHHSCC-------
T ss_pred ------cCCCCCCHHHHHHHhCcHHHHHHHHHHH-----HHHhcccCCCCCC
Confidence 6689999999999999999999999988 8888888888877
No 52
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.93 E-value=4.7e-25 Score=219.98 Aligned_cols=108 Identities=29% Similarity=0.373 Sum_probs=99.2
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 002053 577 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA 656 (974)
Q Consensus 577 lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~ 656 (974)
+++.|++.|++++.+|..|.||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 62 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 141 (169)
T 2y1l_E 62 IVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNA 141 (169)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 56667778888888899999999999999999999999999999999999999999999999999999999999999877
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 002053 657 LSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 690 (974)
Q Consensus 657 ~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~G 690 (974)
+|..|.||||+|+..|+.+++++|++.|
T Consensus 142 ------~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 142 ------QDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp ------CCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred ------cCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 6689999999999999999999999865
No 53
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.93 E-value=1.3e-25 Score=238.07 Aligned_cols=179 Identities=16% Similarity=0.079 Sum_probs=147.4
Q ss_pred CChhHHHHHhcCCCccchh--hhhhhhcCCCCCcc----ccCCCCchhhhhHHHHHHHHhhcCCCCCCCCCCChhhhHHh
Q 002053 455 GRVPFYVTCSNRLSCSEVR--EFEYRASHIPDVDV----ADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQL 528 (974)
Q Consensus 455 G~TPLhvA~~ng~~~seVv--~feyLl~~GAdvna----~D~~G~TpL~~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l 528 (974)
|+||||+||..|+ .+++ .+++|+..|+++|. .|..|.||||..... .
T Consensus 2 G~t~L~~A~~~g~--~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~----~--------------------- 54 (256)
T 2etb_A 2 DRDRLFSVVSRGV--PEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLN----L--------------------- 54 (256)
T ss_dssp CHHHHHHHHHHTC--GGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHT----C---------------------
T ss_pred CccHHHHHHHcCC--HHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHc----c---------------------
Confidence 8899999999999 6544 34888889999998 899999999832110 0
Q ss_pred HHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHHhCCCCCC-----------cccCCCCc
Q 002053 529 NSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPC-----------VLDHCGQG 597 (974)
Q Consensus 529 ~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~lvk~LL~~Gad~n-----------~~D~~G~T 597 (974)
.. +... +++.|++.|++++ ..|..|.|
T Consensus 55 -----------~~-----------g~~~--------------------~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t 92 (256)
T 2etb_A 55 -----------QD-----------GVNA--------------------CIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHS 92 (256)
T ss_dssp -----------BT-----------TBCT--------------------THHHHHHHHHHTTCSSCGGGCCCCSTTTTTCC
T ss_pred -----------cc-----------chHH--------------------HHHHHHhcCCcccchhhhcccccccccccCCC
Confidence 00 0000 3344444444443 34578999
Q ss_pred HHHHHHHcCCHhHHHHHHhCCCcccccCCC-------------CCcHHHHHHHcCCHHHHHHHHH---cCCCCCCCCCCC
Q 002053 598 VLHFAAALGYDWALEPTTVAGVNINFRDVN-------------GWTALHWAAYCGRERTVASLIA---LGAAPGALSDPT 661 (974)
Q Consensus 598 pLH~Aa~~G~~eiVklLL~~GAdvn~~D~~-------------G~TpLH~Aa~~G~~eiV~lLL~---~GAd~n~~~d~~ 661 (974)
|||+||..|+.++|++|+++|+++|.+|.. |+||||+||..|+.++|++|++ +|++++.
T Consensus 93 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~----- 167 (256)
T 2etb_A 93 ALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEA----- 167 (256)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC-----
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCc-----
Confidence 999999999999999999999999999986 9999999999999999999999 9999887
Q ss_pred CCCCCCCCHHHHHHH--cCcHH-------HHHHHHHcCCCCcccCC-------cccCCCCCCHHHhhh
Q 002053 662 PKYPSGRTPADLASS--IGHKG-------IAGYLAESDLSSALSAI-------SLNKKDGDVAEVTGA 713 (974)
Q Consensus 662 ~kD~~G~TPLhlAa~--~G~~e-------iv~lLLe~Gl~~h~adl-------n~~d~~G~T~l~~a~ 713 (974)
+|..|+||||+|+. .++.+ ++++|+++| +++ +.+|..|+||+..|.
T Consensus 168 -~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~g-----a~~~~~~~~~~~~d~~g~tpL~~A~ 229 (256)
T 2etb_A 168 -TDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMG-----ARLCPTVQLEEISNHQGLTPLKLAA 229 (256)
T ss_dssp -CCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH-----HHHSTTCCGGGCCCTTSCCHHHHHH
T ss_pred -cCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcC-----CCcccccccccccCCCCCCHHHHHH
Confidence 66899999999999 88888 999999988 888 999999999997774
No 54
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.93 E-value=3e-25 Score=225.33 Aligned_cols=161 Identities=21% Similarity=0.237 Sum_probs=144.5
Q ss_pred CCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchhhhhHHHHHHHHhhcCCCCCCCCCCChhhhHHhH
Q 002053 450 SSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLN 529 (974)
Q Consensus 450 ~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL~~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~ 529 (974)
.++..|+||||+||..|+ .+++ ++|++.|++++..|..|.||||...
T Consensus 30 ~~d~~g~t~L~~A~~~g~--~~~v--~~Ll~~~~~~~~~~~~g~t~L~~A~----------------------------- 76 (192)
T 2rfm_A 30 YRDSYNRTPLMVACMLGM--ENAI--DKLVENFDKLEDKDIEGSTALIWAV----------------------------- 76 (192)
T ss_dssp CCCTTCCCHHHHHHHHTC--GGGH--HHHHHHHCCTTCCCTTSCCHHHHHH-----------------------------
T ss_pred CcCCCCCCHHHHHHHcCC--HHHH--HHHHHhccccccccccCccHHHHHH-----------------------------
Confidence 457889999999999998 7887 9999999999999999999987311
Q ss_pred HHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHh
Q 002053 530 SKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDW 609 (974)
Q Consensus 530 ~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~e 609 (974)
.. +.. .+++.|++.|++++.+|..|.||||+|+..|+.+
T Consensus 77 ---------------------~~-------------------~~~-~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 115 (192)
T 2rfm_A 77 ---------------------KN-------------------NRL-GIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSE 115 (192)
T ss_dssp ---------------------HT-------------------TCH-HHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred ---------------------Hc-------------------CCH-HHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHH
Confidence 00 000 1678888999999999999999999999999999
Q ss_pred HHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHc
Q 002053 610 ALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAES 689 (974)
Q Consensus 610 iVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~ 689 (974)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++
T Consensus 116 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 189 (192)
T 2rfm_A 116 MSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISA------RDLTGLTAEASARIFGRQEVIKIFTEV 189 (192)
T ss_dssp HHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC------BCTTSCBHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC------cCCCCCCHHHHHHHhCcHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999877 668999999999999999999999987
Q ss_pred C
Q 002053 690 D 690 (974)
Q Consensus 690 G 690 (974)
|
T Consensus 190 ~ 190 (192)
T 2rfm_A 190 R 190 (192)
T ss_dssp H
T ss_pred c
Confidence 5
No 55
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.92 E-value=1.4e-24 Score=220.58 Aligned_cols=176 Identities=17% Similarity=0.077 Sum_probs=154.3
Q ss_pred CCCChhHHHHHhcCCCccchhhhhhhhcCCC-CCccccCCCCchhhhhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHH
Q 002053 453 KVGRVPFYVTCSNRLSCSEVREFEYRASHIP-DVDVADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSK 531 (974)
Q Consensus 453 ~~G~TPLhvA~~ng~~~seVv~feyLl~~GA-dvna~D~~G~TpL~~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~ 531 (974)
..|.||||.||..|+ .+++ ++|+..+. ++|..|..|.||||...
T Consensus 3 ~~~~~~L~~A~~~g~--~~~v--~~ll~~~~~~~~~~~~~g~t~L~~A~------------------------------- 47 (201)
T 3hra_A 3 TYEVGALLEAANQRD--TKKV--KEILQDTTYQVDEVDTEGNTPLNIAV------------------------------- 47 (201)
T ss_dssp CCCTTHHHHHHHTTC--HHHH--HHHHTCTTCCTTCCCTTSCCHHHHHH-------------------------------
T ss_pred cccccHHHHHHHhcc--HHHH--HHHHHcCCCCCCCCCCCCCCHHHHHH-------------------------------
Confidence 468899999999998 6666 77776665 99999988898887311
Q ss_pred HhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHH
Q 002053 532 ISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWAL 611 (974)
Q Consensus 532 l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiV 611 (974)
. .+.. .+++.|++.|++++.+|..|.||||+|+..|+.+++
T Consensus 48 -------------------~-------------------~~~~-~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~ 88 (201)
T 3hra_A 48 -------------------H-------------------NNDI-EIAKALIDRGADINLQNSISDSPYLYAGAQGRTEIL 88 (201)
T ss_dssp -------------------H-------------------HTCH-HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred -------------------H-------------------cCCH-HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 0 0001 178889999999999999999999999999999999
Q ss_pred HHHH-hCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCCCCCCCHHHHHHHcCc-----HHHHH
Q 002053 612 EPTT-VAGVNINFRDVNGWTALHWAAYCGRERTVASLIALG-AAPGALSDPTPKYPSGRTPADLASSIGH-----KGIAG 684 (974)
Q Consensus 612 klLL-~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~G-Ad~n~~~d~~~kD~~G~TPLhlAa~~G~-----~eiv~ 684 (974)
++|+ ..+++++.+|..|+||||+|+..|+.+++++|+++| ++++. +|..|.||||+|+..|. .++++
T Consensus 89 ~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~------~~~~g~t~L~~A~~~~~~~~~~~~~v~ 162 (201)
T 3hra_A 89 AYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDF------QNDFGYTALIEAVGLREGNQLYQDIVK 162 (201)
T ss_dssp HHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTC------CCTTSCCHHHHHHHSSCCSHHHHHHHH
T ss_pred HHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCC------CCCCCCCHHHHHHHhccchhhHHHHHH
Confidence 9999 677899999999999999999999999999999999 88776 66899999999999987 99999
Q ss_pred HHHHcCCCCcccCCcccCCCCCCHHHhhh
Q 002053 685 YLAESDLSSALSAISLNKKDGDVAEVTGA 713 (974)
Q Consensus 685 lLLe~Gl~~h~adln~~d~~G~T~l~~a~ 713 (974)
+|+++| ++++.+|..|.||+..+.
T Consensus 163 ~Ll~~g-----a~~~~~~~~g~t~l~~A~ 186 (201)
T 3hra_A 163 LLMENG-----ADQSIKDNSGRTAMDYAN 186 (201)
T ss_dssp HHHHTT-----CCTTCCCTTSCCHHHHHH
T ss_pred HHHHCC-----CCCCccCCCCCCHHHHHH
Confidence 999988 999999999999997765
No 56
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.92 E-value=9.6e-25 Score=216.38 Aligned_cols=108 Identities=26% Similarity=0.342 Sum_probs=100.6
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 002053 577 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA 656 (974)
Q Consensus 577 lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~ 656 (974)
+++.|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 51 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 130 (167)
T 3v31_A 51 VVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTI 130 (167)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 56677778888888999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 002053 657 LSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 690 (974)
Q Consensus 657 ~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~G 690 (974)
+|..|.||||+|+..|+.+++++|++++
T Consensus 131 ------~~~~g~t~l~~A~~~~~~~~~~~L~~~~ 158 (167)
T 3v31_A 131 ------ETDSGYNSMDLAVALGYRSVQQVIESHL 158 (167)
T ss_dssp ------CCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred ------cCCCCCCHHHHHHHcCcHHHHHHHHHHH
Confidence 6689999999999999999999999876
No 57
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.92 E-value=1.2e-24 Score=214.06 Aligned_cols=156 Identities=21% Similarity=0.207 Sum_probs=135.7
Q ss_pred CCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchhhhhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHh
Q 002053 454 VGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKIS 533 (974)
Q Consensus 454 ~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL~~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~ 533 (974)
...||||.||..|+ .+++ ++|+++|++++..|..|.||+|.. .
T Consensus 4 ~~~~~L~~A~~~g~--~~~v--~~Ll~~~~~~~~~~~~g~t~L~~A-------------~-------------------- 46 (162)
T 1ihb_A 4 PWGNELASAAARGD--LEQL--TSLLQNNVNVNAQNGFGRTALQVM-------------K-------------------- 46 (162)
T ss_dssp -CHHHHHHHHHHTC--HHHH--HHHTTSCCCTTCCCTTSCCHHHHC-------------C--------------------
T ss_pred hHhhHHHHHHHcCC--HHHH--HHHHhCCCCccccCccCccHHHHH-------------H--------------------
Confidence 45688899988888 7776 888888888888888888887620 0
Q ss_pred hhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHH
Q 002053 534 SLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEP 613 (974)
Q Consensus 534 ~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVkl 613 (974)
. + . ..+++.|++.|++++.+|..|.||||+|+..|+.+++++
T Consensus 47 ------~-~-----------~--------------------~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 88 (162)
T 1ihb_A 47 ------L-G-----------N--------------------PEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQT 88 (162)
T ss_dssp ------S-S-----------C--------------------HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred ------c-C-----------c--------------------HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 0 0 0 016788888999999999999999999999999999999
Q ss_pred HHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 002053 614 TTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAP-GALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 690 (974)
Q Consensus 614 LL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~-n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~G 690 (974)
|+++|+++|.+|..|+||||+|+..|+.+++++|+++|+++ +. +|..|.||||+|+..|+.+++++|+++|
T Consensus 89 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~------~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 160 (162)
T 1ihb_A 89 LLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGH------RNHKGDTACDLARLYGRNEVVSLMQANG 160 (162)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCC------cCCCCCcHHHHHHHcCCHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999984 55 6789999999999999999999999988
No 58
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.92 E-value=9.9e-25 Score=219.38 Aligned_cols=118 Identities=19% Similarity=0.204 Sum_probs=102.6
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 002053 577 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA 656 (974)
Q Consensus 577 lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~ 656 (974)
+++.|++.|++++.+|..|.||||+||..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 54 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 133 (179)
T 3f6q_A 54 VVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSI 133 (179)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSB
T ss_pred HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcch
Confidence 45566667778888888899999999999999999999999999999999999999999999999999999999998877
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCC
Q 002053 657 LSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDG 705 (974)
Q Consensus 657 ~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G 705 (974)
+|..|.||||+|+..++.+++++|++.| ++++..+..+
T Consensus 134 ------~~~~g~tpl~~A~~~~~~~~~~~L~~~g-----~~~~~~~~~~ 171 (179)
T 3f6q_A 134 ------CNKYGEMPVDKAKAPLRELLRERAEKMG-----QNLNRIPYKD 171 (179)
T ss_dssp ------CCTTSCCGGGGSCHHHHHHHHHHHHHTT-----CCCSCBCCCC
T ss_pred ------hccCCCCcHHHHHHHHHHHHHHHHHHhh-----cCcccCCccc
Confidence 6689999999999999999999999988 7777766544
No 59
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.91 E-value=4e-24 Score=209.48 Aligned_cols=104 Identities=25% Similarity=0.293 Sum_probs=92.5
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 002053 577 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA 656 (974)
Q Consensus 577 lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~ 656 (974)
+++.|++.|++++.+|..|.||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 49 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 128 (153)
T 1awc_B 49 TTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHT 128 (153)
T ss_dssp HHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc
Confidence 34455566777777888899999999999999999999999999999999999999999999999999999999998877
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCcHHHHHHH
Q 002053 657 LSDPTPKYPSGRTPADLASSIGHKGIAGYL 686 (974)
Q Consensus 657 ~~d~~~kD~~G~TPLhlAa~~G~~eiv~lL 686 (974)
+|..|.||||+|+..|+.+++++|
T Consensus 129 ------~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 129 ------QSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp ------CCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ------cCCCCCCHHHHHHHcCCHHHHHHh
Confidence 668999999999999999999887
No 60
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.91 E-value=1.2e-24 Score=232.97 Aligned_cols=197 Identities=13% Similarity=0.023 Sum_probs=152.3
Q ss_pred CCCCCCChhHHHHHhcCCCccchhhhhhhhc----CCCCCc----cccCCCCchhhh-------hHHHHHHHHhhcCCCC
Q 002053 450 SSQKVGRVPFYVTCSNRLSCSEVREFEYRAS----HIPDVD----VADNCGDITSEN-------LRMQFGKLLCLTSVST 514 (974)
Q Consensus 450 ~~~~~G~TPLhvA~~ng~~~seVv~feyLl~----~GAdvn----a~D~~G~TpL~~-------g~~~ivkLLl~g~~~~ 514 (974)
..+..|+||||+||..|+ .+++ ++|++ .+++++ ..|..|.||||. ++.+++++|+..+..
T Consensus 8 ~~d~~g~t~L~~A~~~g~--~~~v--~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~- 82 (273)
T 2pnn_A 8 PPRLYDRRSIFDAVAQSN--CQEL--ESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARK- 82 (273)
T ss_dssp ---CCCHHHHHHHHHTTC--SSTT--TTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHH-
T ss_pred CCCcccchHHHHHHHcCC--HHHH--HHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhcc-
Confidence 567889999999999999 7777 66654 677776 347888999883 333444443321100
Q ss_pred CCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHHhCCCCCCcccCC
Q 002053 515 PNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHC 594 (974)
Q Consensus 515 ~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~lvk~LL~~Gad~n~~D~~ 594 (974)
.+ .++.++. +.+...|..
T Consensus 83 --------------------------------------~~----------------------~~~~~i~--~~~~~~d~~ 100 (273)
T 2pnn_A 83 --------------------------------------TD----------------------SLKQFVN--ASYTDSYYK 100 (273)
T ss_dssp --------------------------------------TT----------------------CHHHHHT--CCCCSTTTT
T ss_pred --------------------------------------cc----------------------chhHHhh--cccccccCC
Confidence 00 0111111 223446779
Q ss_pred CCcHHHHHHHcCCHhHHHHHHhCCCcccccCC--------------CCCcHHHHHHHcCCHHHHHHHHH---cCCCCCCC
Q 002053 595 GQGVLHFAAALGYDWALEPTTVAGVNINFRDV--------------NGWTALHWAAYCGRERTVASLIA---LGAAPGAL 657 (974)
Q Consensus 595 G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~--------------~G~TpLH~Aa~~G~~eiV~lLL~---~GAd~n~~ 657 (974)
|.||||+||..|+.++|++|+++|++++.++. .|+||||+||..|+.++|++|++ +|++++.
T Consensus 101 g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~- 179 (273)
T 2pnn_A 101 GQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISA- 179 (273)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC-
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCcee-
Confidence 99999999999999999999999999999997 79999999999999999999999 9999887
Q ss_pred CCCCCCCCCCCCHHHHHHHcCc---------HHHHHHHHHcCCCCcccCCc-------ccCCCCCCHHHhhh-----hhh
Q 002053 658 SDPTPKYPSGRTPADLASSIGH---------KGIAGYLAESDLSSALSAIS-------LNKKDGDVAEVTGA-----TAV 716 (974)
Q Consensus 658 ~d~~~kD~~G~TPLhlAa~~G~---------~eiv~lLLe~Gl~~h~adln-------~~d~~G~T~l~~a~-----~~~ 716 (974)
+|..|+||||+|+..|+ .+++++|+++| ++++ ++|..|.||+..|. ..+
T Consensus 180 -----~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~g-----a~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv 249 (273)
T 2pnn_A 180 -----RDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILG-----AKLHPTLKLEEITNRKGLTPLALAASSGKIGVL 249 (273)
T ss_dssp -----CCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH-----HHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHH
T ss_pred -----eCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhh-----hhcccccccccccCCCCCCHHHHHHHhChHHHH
Confidence 66899999999999998 89999999988 8886 58999999997765 455
Q ss_pred hcccccCC
Q 002053 717 QTVPQRCP 724 (974)
Q Consensus 717 ~~l~er~a 724 (974)
+.++++++
T Consensus 250 ~~Ll~~ga 257 (273)
T 2pnn_A 250 AYILQREI 257 (273)
T ss_dssp HHHHHHHT
T ss_pred HHHHHCCC
Confidence 66666665
No 61
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.91 E-value=9.9e-26 Score=249.93 Aligned_cols=211 Identities=18% Similarity=0.111 Sum_probs=140.7
Q ss_pred chhHHHhcCCchHHHHHHHCCCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchhhh----
Q 002053 423 NCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN---- 498 (974)
Q Consensus 423 ~l~~Ac~fG~ieVV~~LL~~Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL~~---- 498 (974)
..++++..+..++++.|++.|++++. +.+..|+||||+||..|+ .+++ ++|+++|+++|.+|..|.||||.
T Consensus 100 ~~~~a~~~~~~~~~~~l~~~g~dvn~-~~d~~g~TpLh~Aa~~g~--~~~v--~~Ll~~Gad~n~~d~~g~TpLh~A~~~ 174 (327)
T 1sw6_A 100 QQHVSFDSLLQEVNDAFPNTQLNLNI-PVDEHGNTPLHWLTSIAN--LELV--KHLVKHGSNRLYGDNMGESCLVKAVKS 174 (327)
T ss_dssp ----CHHHHHHHHHHHCTTSCCCSCS-CCSTTCCCHHHHHHHTTC--HHHH--HHHHHTTCCTTBCCTTCCCHHHHHHHS
T ss_pred hhHHHHHhhHHHHHHHHHhcCCCccc-ccCCCCCcHHHHHHHcCC--HHHH--HHHHHcCCCCCCcCCCCCCHHHHHHHh
Confidence 34678888888999999999999982 268899999999999999 8888 99999999999999999999993
Q ss_pred hH---HHHHHHHhh-cCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChH-HHHHHHHHHHHHHhh
Q 002053 499 LR---MQFGKLLCL-TSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSE-EVKEKLVQKLLKEKL 573 (974)
Q Consensus 499 g~---~~ivkLLl~-g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~-~~~~~lL~~a~~~~l 573 (974)
++ .++++.|+. +.. .+...+..++++|+.++........ .....++.. .
T Consensus 175 g~~~~~~~~~~ll~~~~~---------------------~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~-----~ 228 (327)
T 1sw6_A 175 VNNYDSGTFEALLDYLYP---------------------CLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDI-----L 228 (327)
T ss_dssp SHHHHTTCHHHHHHHHGG---------------------GGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHH-----H
T ss_pred cccccHHHHHHHHHhhhc---------------------cccCCCCCCCCHHHHHHHHccccccHHHHHHHHHH-----H
Confidence 33 233333322 111 1122346788888877653221110 000111110 0
Q ss_pred HHHHH--------HHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHH
Q 002053 574 QVWLV--------QKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVA 645 (974)
Q Consensus 574 ~~~lv--------k~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~ 645 (974)
..++. +.+...|++++.+|..|.||||+|+. +++|+++ ++|.+|..|+||||+||..|+.++|+
T Consensus 229 ~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~ 300 (327)
T 1sw6_A 229 MGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVD 300 (327)
T ss_dssp HHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHH
T ss_pred HHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 00000 01123399999999999999999995 8999998 68999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcC
Q 002053 646 SLIALGAAPGALSDPTPKYPSGRTPADLASSIG 678 (974)
Q Consensus 646 lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G 678 (974)
+||++||+++. +|..|+||||+|+.+|
T Consensus 301 ~Ll~~Gad~~~------~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 301 ALLDYGADPFI------ANKSGLRPVDFGAGLE 327 (327)
T ss_dssp HHHHTTCCTTC------CCTTSCCGGGGTCC--
T ss_pred HHHHcCCCCcc------cCCCCCCHHHHHHhcC
Confidence 99999999987 6799999999998765
No 62
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.91 E-value=3.6e-24 Score=210.53 Aligned_cols=156 Identities=20% Similarity=0.140 Sum_probs=138.5
Q ss_pred ccchhHHHhcCCchHHHHHHHCCCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchhhhhH
Q 002053 421 AENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLR 500 (974)
Q Consensus 421 ~t~l~~Ac~fG~ieVV~~LL~~Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL~~g~ 500 (974)
.+++++||..|++++++.|++.|++++ ..+..|+||||+||. |+ .+++ ++|+++|++++.+|..|.||+|...
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~~~~~~--~~~~~g~t~L~~A~~-~~--~~~v--~~Ll~~g~~~~~~~~~g~t~L~~A~ 78 (162)
T 1ihb_A 6 GNELASAAARGDLEQLTSLLQNNVNVN--AQNGFGRTALQVMKL-GN--PEIA--RRLLLRGANPDLKDRTGFAVIHDAA 78 (162)
T ss_dssp HHHHHHHHHHTCHHHHHHHTTSCCCTT--CCCTTSCCHHHHCCS-SC--HHHH--HHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred hhHHHHHHHcCCHHHHHHHHhCCCCcc--ccCccCccHHHHHHc-Cc--HHHH--HHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 378999999999999999999999888 778899999999998 87 7887 9999999999999999999887311
Q ss_pred HHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHHHHH
Q 002053 501 MQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQK 580 (974)
Q Consensus 501 ~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~lvk~ 580 (974)
. .+.. .+++.
T Consensus 79 ~---------------------------------------------------------------------~~~~-~~v~~ 88 (162)
T 1ihb_A 79 R---------------------------------------------------------------------AGFL-DTLQT 88 (162)
T ss_dssp H---------------------------------------------------------------------HTCH-HHHHH
T ss_pred H---------------------------------------------------------------------cCCH-HHHHH
Confidence 0 0001 16888
Q ss_pred HHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCc-ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 002053 581 AAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVN-INFRDVNGWTALHWAAYCGRERTVASLIALGAA 653 (974)
Q Consensus 581 LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAd-vn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd 653 (974)
|++.|+++|.+|..|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++||+
T Consensus 89 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 89 LLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 8999999999999999999999999999999999999998 699999999999999999999999999999986
No 63
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.90 E-value=5.8e-24 Score=210.31 Aligned_cols=107 Identities=29% Similarity=0.314 Sum_probs=98.8
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 002053 577 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA 656 (974)
Q Consensus 577 lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~ 656 (974)
+++.|++.|++++.+|..|+||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 57 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 136 (165)
T 3twr_A 57 VVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTK 136 (165)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 56777788889999999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 002053 657 LSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 690 (974)
Q Consensus 657 ~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~G 690 (974)
+|..|.||||+|+. |+.+++++|+++|
T Consensus 137 ------~~~~g~t~l~~a~~-~~~~i~~~L~~~g 163 (165)
T 3twr_A 137 ------KNRDGNTPLDLVKD-GDTDIQDLLRGDA 163 (165)
T ss_dssp ------CCTTSCCTGGGSCT-TCHHHHHHHHTC-
T ss_pred ------cCCCCCChhHhHhc-CChHHHHHHhhcc
Confidence 66899999999877 8999999999877
No 64
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.90 E-value=1.4e-23 Score=213.04 Aligned_cols=159 Identities=17% Similarity=0.098 Sum_probs=142.0
Q ss_pred ccccccchhHHHhcCCchHHHHHHHCCCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchh
Q 002053 417 SQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITS 496 (974)
Q Consensus 417 ~~~~~t~l~~Ac~fG~ieVV~~LL~~Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL 496 (974)
+..+.|++++||..|+.+++++|++.|++++ ..+..|.||||+||.+|+ .+++ ++|++.|++++.+|..|.|||
T Consensus 32 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~--~~~~~g~t~L~~A~~~~~--~~~v--~~Ll~~g~~~~~~~~~g~t~L 105 (192)
T 2rfm_A 32 DSYNRTPLMVACMLGMENAIDKLVENFDKLE--DKDIEGSTALIWAVKNNR--LGIA--EKLLSKGSNVNTKDFSGKTPL 105 (192)
T ss_dssp CTTCCCHHHHHHHHTCGGGHHHHHHHHCCTT--CCCTTSCCHHHHHHHTTC--HHHH--HHHHHHTCCTTCCCTTSCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhccccc--cccccCccHHHHHHHcCC--HHHH--HHHHHCCCCCCCCCCCCCcHH
Confidence 3345689999999999999999999999888 678889999999999999 8887 999999999999999999998
Q ss_pred hhhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHH
Q 002053 497 ENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVW 576 (974)
Q Consensus 497 ~~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~ 576 (974)
|.... .+.. .
T Consensus 106 ~~A~~---------------------------------------------------------------------~~~~-~ 115 (192)
T 2rfm_A 106 MWSII---------------------------------------------------------------------FGYS-E 115 (192)
T ss_dssp HHHHH---------------------------------------------------------------------HTCH-H
T ss_pred HHHHH---------------------------------------------------------------------cCCH-H
Confidence 73110 0001 1
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 002053 577 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALG 651 (974)
Q Consensus 577 lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~G 651 (974)
++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 116 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 116 MSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 678889999999999999999999999999999999999999999999999999999999999999999999875
No 65
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.90 E-value=1.3e-23 Score=222.88 Aligned_cols=186 Identities=15% Similarity=0.073 Sum_probs=147.9
Q ss_pred CCCCChhHHHHHhcCCCccchh--hhhhhhcCCCCCcccc----CCCCchhhh-------hHHHHHHHHhhcCCCCCCCC
Q 002053 452 QKVGRVPFYVTCSNRLSCSEVR--EFEYRASHIPDVDVAD----NCGDITSEN-------LRMQFGKLLCLTSVSTPNYD 518 (974)
Q Consensus 452 ~~~G~TPLhvA~~ng~~~seVv--~feyLl~~GAdvna~D----~~G~TpL~~-------g~~~ivkLLl~g~~~~~~~~ 518 (974)
+..|++|||.||..|+ .+++ .+++|+..|++++..+ ..|.||||. ++.+++++|+..+
T Consensus 2 ~~~~~~~L~~A~~~g~--~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g------- 72 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGS--PDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIA------- 72 (260)
T ss_dssp CCCCHHHHHHHHHHTC--GGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHH-------
T ss_pred ccchHHHHHHHHHhCC--HHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhc-------
Confidence 3568999999999998 6644 1366666999999876 669999983 3333444332211
Q ss_pred CCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcH
Q 002053 519 PSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGV 598 (974)
Q Consensus 519 ~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~lvk~LL~~Gad~n~~D~~G~Tp 598 (974)
..... +..++ ..+++..|..|+||
T Consensus 73 --------------------------------~~~~~----------------------~~~~~--~~~~~~~d~~g~t~ 96 (260)
T 3jxi_A 73 --------------------------------EKTGN----------------------MREFI--NSPFRDVYYRGQTA 96 (260)
T ss_dssp --------------------------------HHTTC----------------------HHHHH--TCCBCCSSEESBCH
T ss_pred --------------------------------ccccc----------------------hHhhh--cccccccccCCCCH
Confidence 00000 00011 24556677799999
Q ss_pred HHHHHHcCCHhHHHHHHhCCCcccccC--------------CCCCcHHHHHHHcCCHHHHHHHHH---cCCCCCCCCCCC
Q 002053 599 LHFAAALGYDWALEPTTVAGVNINFRD--------------VNGWTALHWAAYCGRERTVASLIA---LGAAPGALSDPT 661 (974)
Q Consensus 599 LH~Aa~~G~~eiVklLL~~GAdvn~~D--------------~~G~TpLH~Aa~~G~~eiV~lLL~---~GAd~n~~~d~~ 661 (974)
||+||..|+.++|++|+++|+++|.++ ..|+||||+||..|+.++|++|++ +|++++.
T Consensus 97 L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~----- 171 (260)
T 3jxi_A 97 LHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRR----- 171 (260)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC-----
T ss_pred HHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcc-----
Confidence 999999999999999999999999999 689999999999999999999999 8999887
Q ss_pred CCCCCCCCHHHHHHHcCc---------HHHHHHHHHcCCCCcccCC-------cccCCCCCCHHHhhh
Q 002053 662 PKYPSGRTPADLASSIGH---------KGIAGYLAESDLSSALSAI-------SLNKKDGDVAEVTGA 713 (974)
Q Consensus 662 ~kD~~G~TPLhlAa~~G~---------~eiv~lLLe~Gl~~h~adl-------n~~d~~G~T~l~~a~ 713 (974)
+|..|+||||+|+..|+ .+++++|+++| +++ +++|..|+||+..|.
T Consensus 172 -~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~g-----a~~~~~~~~~~~~d~~g~tpL~~A~ 233 (260)
T 3jxi_A 172 -QDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKC-----AKLFPDTNLEALLNNDGLSPLMMAA 233 (260)
T ss_dssp -CCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHH-----HHHCTTCCGGGCCCTTSCCHHHHHH
T ss_pred -cCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhC-----cccccccchhhcccCCCCCHHHHHH
Confidence 66899999999999888 79999999988 888 789999999997775
No 66
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.90 E-value=2.3e-23 Score=203.85 Aligned_cols=153 Identities=19% Similarity=0.170 Sum_probs=130.8
Q ss_pred CChhHHHHHhcCCCccchhhhhhhhcC-CCCCccccCCCCchhhhhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHh
Q 002053 455 GRVPFYVTCSNRLSCSEVREFEYRASH-IPDVDVADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKIS 533 (974)
Q Consensus 455 G~TPLhvA~~ng~~~seVv~feyLl~~-GAdvna~D~~G~TpL~~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~ 533 (974)
|.||||+||..|+ .+++ ++|++. +.+++..|..|.||+|. .
T Consensus 2 ~~~~L~~A~~~g~--~~~v--~~ll~~~~~~~~~~~~~g~t~L~~-~--------------------------------- 43 (156)
T 1bd8_A 2 AGDRLSGAAARGD--VQEV--RRLLHRELVHPDALNRFGKTALQV-M--------------------------------- 43 (156)
T ss_dssp HHHHHHHHHHHTC--HHHH--HHHHHTTCCCTTCCCTTSCCHHHH-S---------------------------------
T ss_pred cchHHHHHHHhCC--HHHH--HHHHHhhCcCccccCCCCCcHHHH-H---------------------------------
Confidence 4688888888888 6666 777777 34788888888888762 0
Q ss_pred hhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHH
Q 002053 534 SLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEP 613 (974)
Q Consensus 534 ~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVkl 613 (974)
..+. . .+++.|++.|++++.+|..|.||||+||..|+.+++++
T Consensus 44 -----------------~~~~-------------------~-~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 86 (156)
T 1bd8_A 44 -----------------MFGS-------------------T-AIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKV 86 (156)
T ss_dssp -----------------CTTC-------------------H-HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred -----------------HcCC-------------------H-HHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 0000 0 16778889999999999999999999999999999999
Q ss_pred HHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHc
Q 002053 614 TTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAES 689 (974)
Q Consensus 614 LL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~ 689 (974)
|+++|++++.+|..|+||||+|+..|+.+++++|+++ ++++. +|..|.||||+|+..|+.+++++|+++
T Consensus 87 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~------~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 87 LVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHR------RDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTC------CCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCC------cCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 9999999999999999999999999999999999998 87766 678999999999999999999999963
No 67
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.90 E-value=1.6e-24 Score=229.06 Aligned_cols=117 Identities=29% Similarity=0.320 Sum_probs=108.1
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 002053 577 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA 656 (974)
Q Consensus 577 lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~ 656 (974)
+++.|++.|+++|.+|..|+||||+||..|+.++|++|+++|+++|.+|..|+||||+||..|+.++|++|+++|++++.
T Consensus 52 ~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~ 131 (239)
T 1ycs_B 52 LVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFA 131 (239)
T ss_dssp HHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcce
Confidence 78888999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCC-CHHHHH--HHcCcHHHHHHHHHcCCCCcccCCcccCCC
Q 002053 657 LSDPTPKYPSGR-TPADLA--SSIGHKGIAGYLAESDLSSALSAISLNKKD 704 (974)
Q Consensus 657 ~~d~~~kD~~G~-TPLhlA--a~~G~~eiv~lLLe~Gl~~h~adln~~d~~ 704 (974)
++..|. ||||+| +..|+.+|+++|+++| ++++..+..
T Consensus 132 ------~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~-----a~~~~~~~~ 171 (239)
T 1ycs_B 132 ------MTYSDMQTAADKCEEMEEGYTQCSQFLYGVQ-----EKMGIMNKG 171 (239)
T ss_dssp ------CCSSSCCCHHHHCCSSSTTCCCHHHHHHHHH-----HHTTTTGGG
T ss_pred ------ecCCCCcchHHHHHHhhhccHHHHHHHHHhh-----hcccccccc
Confidence 445665 999999 8889999999999988 777776443
No 68
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.89 E-value=2.3e-22 Score=200.41 Aligned_cols=140 Identities=26% Similarity=0.234 Sum_probs=129.5
Q ss_pred HHHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCH
Q 002053 562 EKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRE 641 (974)
Q Consensus 562 ~~lL~~a~~~~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~ 641 (974)
.+.++.++..+..+ +++.|++.|+++|.+|..|.||||+||..|+.+++++|+++|++++.+|..|+||||+||..|+.
T Consensus 15 ~~~l~~A~~~g~~~-~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 93 (169)
T 2y1l_E 15 GKKLLEAARAGRDD-EVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHL 93 (169)
T ss_dssp HHHHHHHHHHTCHH-HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred cchHHHHHHcCCHH-HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 34566666666655 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHHhhh
Q 002053 642 RTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGA 713 (974)
Q Consensus 642 eiV~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~a~ 713 (974)
+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+..+.
T Consensus 94 ~~~~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~l~~A~ 154 (169)
T 2y1l_E 94 EIVEVLLKNGADVNA------NDMEGHTPLHLAAMFGHLEIVEVLLKNG-----ADVNAQDKFGKTAFDISI 154 (169)
T ss_dssp HHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHH
T ss_pred HHHHHHHHcCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCcCCCCCCHHHHHH
Confidence 999999999999877 6689999999999999999999999988 999999999999997764
No 69
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.88 E-value=8.7e-25 Score=230.89 Aligned_cols=190 Identities=13% Similarity=-0.047 Sum_probs=150.3
Q ss_pred HHHHHHCCCCcCCC-CCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchhhhhHHHHHHHHhhcCCCC
Q 002053 436 PAEIVAGGVLRCHT-SSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLRMQFGKLLCLTSVST 514 (974)
Q Consensus 436 V~~LL~~Ga~i~~~-~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL~~g~~~ivkLLl~g~~~~ 514 (974)
++.||++|++.+.. .....|.||||+||..|+ .+++ ++|++.|+++|.+|..|.||||...
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~--~~~v--~~Ll~~g~~~~~~d~~g~tpLh~A~-------------- 62 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGE--LEVV--QQAVKEMNDPSQPNEEGITALHNAI-------------- 62 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTC--HHHH--HHHHHHSSCTTCCCTTSCCHHHHHH--------------
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCC--HHHH--HHHHhcCCCCCCCCCCCCCHHHHHH--------------
Confidence 46789999877632 235668899999999999 7887 9999999999999999999987311
Q ss_pred CCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHHhCCCCCCcccCC
Q 002053 515 PNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHC 594 (974)
Q Consensus 515 ~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~lvk~LL~~Gad~n~~D~~ 594 (974)
.. +.. .++++|++.|+++|.+|..
T Consensus 63 ------------------------------------~~-------------------g~~-~~v~~Ll~~ga~~n~~d~~ 86 (229)
T 2vge_A 63 ------------------------------------CG-------------------ANY-SIVDFLITAGANVNSPDSH 86 (229)
T ss_dssp ------------------------------------HT-------------------TCH-HHHHHHHHTTCCTTCCCTT
T ss_pred ------------------------------------Hc-------------------CCH-HHHHHHHHCCCCCCCCCCC
Confidence 00 000 1688889999999999999
Q ss_pred CCcHHHHHHHcCCHhHHHHHHhCCCcccccC-CCCCcHHHHH--HHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHH
Q 002053 595 GQGVLHFAAALGYDWALEPTTVAGVNINFRD-VNGWTALHWA--AYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPA 671 (974)
Q Consensus 595 G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D-~~G~TpLH~A--a~~G~~eiV~lLL~~GAd~n~~~d~~~kD~~G~TPL 671 (974)
|+||||+||..|+.+++++|+++|++++.++ ..|+||||+| +..|+.+++++|+++|++++. +|..|.|||
T Consensus 87 g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~------~~~~~~~~l 160 (229)
T 2vge_A 87 GWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGL------MNSGAVYAL 160 (229)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTT------SGGGEEEES
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCccc------ccCCchHHH
Confidence 9999999999999999999999999999987 6999999999 999999999999999999887 557899999
Q ss_pred HHHHHcCcHHHHHHHHHcCCCCcccC--CcccCCCCCCHHHhhh
Q 002053 672 DLASSIGHKGIAGYLAESDLSSALSA--ISLNKKDGDVAEVTGA 713 (974)
Q Consensus 672 hlAa~~G~~eiv~lLLe~Gl~~h~ad--ln~~d~~G~T~l~~a~ 713 (974)
+.++..+. +++|++.| ++ ++.+|..|+||+..|.
T Consensus 161 ~~~~~~~~---~~~ll~~g-----a~~~~~~~d~~G~TpL~~A~ 196 (229)
T 2vge_A 161 WDYSAEFG---DELSFREG-----ESVTVLRRDGPEETDWWWAA 196 (229)
T ss_dssp SCBCCSST---TBCCBCTT-----CEEEEEESSCTTCSSEEEEE
T ss_pred HHHhhccc---cccCcccc-----ccccccccCCCcccHHHHHH
Confidence 96655543 35677666 66 7788999999997665
No 70
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.88 E-value=3.4e-22 Score=195.69 Aligned_cols=139 Identities=24% Similarity=0.150 Sum_probs=126.6
Q ss_pred HHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHH
Q 002053 563 KLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRER 642 (974)
Q Consensus 563 ~lL~~a~~~~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~e 642 (974)
+.++.++..+..+ +++.|++.|++++ .|..|.||||+||..|+.+++++|+++|++++.+|..|+||||+||..|+.+
T Consensus 4 ~~L~~A~~~g~~~-~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 81 (153)
T 1awc_B 4 KKLLEAARAGQDD-EVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHAN 81 (153)
T ss_dssp HHHHHHHHHTCHH-HHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred HHHHHHHHcCCHH-HHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHH
Confidence 3455566666555 7899999999887 5889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHHhhhh
Q 002053 643 TVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGAT 714 (974)
Q Consensus 643 iV~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~a~~ 714 (974)
++++|+++|++++. +|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+..+..
T Consensus 82 ~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~t~l~~A~~ 142 (153)
T 1awc_B 82 IVEVLLKHGADVNA------KDMLKMTALHWATEHNHQEVVELLIKYG-----ADVHTQSKFCKTAFDISID 142 (153)
T ss_dssp HHHHHHTTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHcCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCccccCCCCCCHHHHHHH
Confidence 99999999999877 6689999999999999999999999988 9999999999999977643
No 71
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.88 E-value=1.6e-23 Score=214.81 Aligned_cols=108 Identities=8% Similarity=-0.156 Sum_probs=58.3
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCC------HhHHHHHHhCCCcccccCCCCC-cHHHHHHHcCC-----HHHH
Q 002053 577 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGY------DWALEPTTVAGVNINFRDVNGW-TALHWAAYCGR-----ERTV 644 (974)
Q Consensus 577 lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~------~eiVklLL~~GAdvn~~D~~G~-TpLH~Aa~~G~-----~eiV 644 (974)
++++|+++|++||.+|..|+||||+|+..|+ .+++++||++|+++|.+|..|+ ||||+|+..+. .+++
T Consensus 57 iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv 136 (186)
T 3t8k_A 57 ISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLY 136 (186)
T ss_dssp HHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHH
Confidence 3444455555555555555555555555554 3445555555555555555555 55555555332 3355
Q ss_pred HHHHH-cCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 002053 645 ASLIA-LGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 690 (974)
Q Consensus 645 ~lLL~-~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~G 690 (974)
++|++ +|++++. +|..|+||||+|+..|+.++|++|+++.
T Consensus 137 ~~Ll~~~gad~~~------~d~~G~TpL~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 137 KLIFSQSGLQLLI------KDKWGLTALEFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp HHHHTSTTCCTTC------CCTTSCCHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHhcCCCCcc------cCCCCCCHHHHHHHcCCHHHHHHHHHHH
Confidence 55555 5555544 4455555555555555555555555543
No 72
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.88 E-value=5e-22 Score=196.80 Aligned_cols=137 Identities=20% Similarity=0.098 Sum_probs=126.1
Q ss_pred HHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHH
Q 002053 565 VQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTV 644 (974)
Q Consensus 565 L~~a~~~~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV 644 (974)
++.++..+..+ +++.|++.|++++.+|..|.||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++
T Consensus 7 L~~A~~~g~~~-~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 85 (167)
T 3v31_A 7 VHQLAAQGEML-YLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIV 85 (167)
T ss_dssp HHHHHHTTCHH-HHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHH
T ss_pred HHHHHHCCCHH-HHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHH
Confidence 44455555444 78899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHHhhh
Q 002053 645 ASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGA 713 (974)
Q Consensus 645 ~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~a~ 713 (974)
++|+++|++++. +|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+..+.
T Consensus 86 ~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~l~~A~ 143 (167)
T 3v31_A 86 KMLLDCGVDVNE------YDWNGGTPLLYAVHGNHVKCVKMLLESG-----ADPTIETDSGYNSMDLAV 143 (167)
T ss_dssp HHHHHHTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHH
T ss_pred HHHHHCCCCCCc------CCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCcCCCCCCHHHHHH
Confidence 999999999887 6689999999999999999999999988 999999999999997764
No 73
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.88 E-value=5.2e-22 Score=196.28 Aligned_cols=141 Identities=19% Similarity=0.150 Sum_probs=126.4
Q ss_pred HHHHHHHHHHhhHHHHHHHHHh-CCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCC
Q 002053 562 EKLVQKLLKEKLQVWLVQKAAE-GGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 640 (974)
Q Consensus 562 ~~lL~~a~~~~l~~~lvk~LL~-~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~ 640 (974)
.+.++.++..+..+ +++.|++ .+.+++..+..|.||||+||..|+.+++++|+++|++++.+|..|+||||+||..|+
T Consensus 9 ~~~l~~A~~~g~~~-~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 87 (165)
T 3twr_A 9 DRQLLEAAKAGDVE-TVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGH 87 (165)
T ss_dssp HHHHHHHHHHTCHH-HHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred hHHHHHHHHhCCHH-HHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCc
Confidence 44555556555555 6777776 667888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHHhhhh
Q 002053 641 ERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGAT 714 (974)
Q Consensus 641 ~eiV~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~a~~ 714 (974)
.+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+..+..
T Consensus 88 ~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~t~l~~a~~ 150 (165)
T 3twr_A 88 YEVAELLVKHGAVVNV------ADLWKFTPLHEAAAKGKYEICKLLLQHG-----ADPTKKNRDGNTPLDLVKD 150 (165)
T ss_dssp HHHHHHHHHTTCCTTC------CCTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCTGGGSCT
T ss_pred HHHHHHHHhCCCCCCC------cCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCcccCCCCCChhHhHhc
Confidence 9999999999999887 6689999999999999999999999988 9999999999999977643
No 74
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.88 E-value=7.4e-22 Score=198.36 Aligned_cols=137 Identities=23% Similarity=0.227 Sum_probs=124.2
Q ss_pred HHHHHHHhhHHHHHHHHHhC-CCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHH
Q 002053 565 VQKLLKEKLQVWLVQKAAEG-GKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERT 643 (974)
Q Consensus 565 L~~a~~~~l~~~lvk~LL~~-Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~ei 643 (974)
++.++..+..+ +++.|++. +.+++..|..|+||||+||..|+.+++++|+++|++++.+|..|+||||+||..|+.++
T Consensus 9 l~~A~~~g~~~-~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 87 (179)
T 3f6q_A 9 IFTQCREGNAV-AVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDI 87 (179)
T ss_dssp HHHHHHHTCHH-HHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHH-HHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHH
Confidence 34444444444 67777776 78899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHHhhh
Q 002053 644 VASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGA 713 (974)
Q Consensus 644 V~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~a~ 713 (974)
|++|+++|++++. +|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+..+.
T Consensus 88 v~~Ll~~g~~~~~------~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~tpl~~A~ 146 (179)
T 3f6q_A 88 VQKLLQYKADINA------VNEHGNVPLHYACFWGQDQVAEDLVANG-----ALVSICNKYGEMPVDKAK 146 (179)
T ss_dssp HHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCSSBCCTTSCCGGGGSC
T ss_pred HHHHHHcCCCCCc------cCCCCCCHHHHHHHcCCHHHHHHHHHCC-----CCcchhccCCCCcHHHHH
Confidence 9999999999887 6689999999999999999999999988 999999999999997664
No 75
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.87 E-value=7.9e-23 Score=221.26 Aligned_cols=126 Identities=26% Similarity=0.225 Sum_probs=119.5
Q ss_pred HHHHHHhCCC-CCCcccCCCCcHHHHHH-----HcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 002053 577 LVQKAAEGGK-GPCVLDHCGQGVLHFAA-----ALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIAL 650 (974)
Q Consensus 577 lvk~LL~~Ga-d~n~~D~~G~TpLH~Aa-----~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~ 650 (974)
+++.|++.|+ +++..|..|.||||+|+ ..++.+++++|++.|++++..|..|+||||+||..|+.++|++|+++
T Consensus 126 ~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ 205 (276)
T 4hbd_A 126 VVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLAC 205 (276)
T ss_dssp HHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhC
Confidence 7899999998 99999999999999999 66889999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHH-cCCCCcccCCcccCCCCCCHHHhhh
Q 002053 651 GAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAE-SDLSSALSAISLNKKDGDVAEVTGA 713 (974)
Q Consensus 651 GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe-~Gl~~h~adln~~d~~G~T~l~~a~ 713 (974)
|+++|. +|..|+||||+|+..|+.+++++|++ .| ++++.+|..|.||+..|.
T Consensus 206 gad~n~------~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g-----ad~~~~d~~g~TpL~~A~ 258 (276)
T 4hbd_A 206 EADVNV------QDDDGSTALMCACEHGHKEIAGLLLAVPS-----CDISLTDRDGSTALMVAL 258 (276)
T ss_dssp TCCTTC------CCTTSCCHHHHHHHHTCHHHHHHHHTSTT-----CCTTCCCTTSCCHHHHHH
T ss_pred CCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHhcCC-----CCCcCcCCCCCCHHHHHH
Confidence 999887 66899999999999999999999998 67 999999999999997775
No 76
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.87 E-value=1.4e-22 Score=199.72 Aligned_cols=133 Identities=23% Similarity=0.239 Sum_probs=108.2
Q ss_pred HHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCc-HHHHHHHcCCHHH
Q 002053 565 VQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWT-ALHWAAYCGRERT 643 (974)
Q Consensus 565 L~~a~~~~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~T-pLH~Aa~~G~~ei 643 (974)
|+.++..+..+ +++.|++.|+++|.+|..|+||||+|+ .|+.+++++|+++|+++|.+|..|+| |||+|+..|+.++
T Consensus 16 L~~A~~~g~~~-~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~ 93 (156)
T 1bi7_B 16 LATAAARGRVE-EVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDT 93 (156)
T ss_dssp HHHHHHHTCHH-HHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHH
T ss_pred HHHHHHcCCHH-HHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHH
Confidence 44444444444 889999999999999999999999996 99999999999999999999999999 9999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHH
Q 002053 644 VASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEV 710 (974)
Q Consensus 644 V~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~ 710 (974)
|++|+++|++++. +|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||..
T Consensus 94 v~~Ll~~ga~~~~------~d~~g~tpl~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 94 LVVLHRAGARLDV------RDAWGRLPVDLAEELGHRDVARYLRAAA-----GGTRGSNHARIDAAE 149 (156)
T ss_dssp HHHHHHHTCCSSC------CCTTCCCHHHHHHHHTCHHHHHHHSSCC--------------------
T ss_pred HHHHHHcCCCCcc------cCCCCCCHHHHHHHhCHHHHHHHHHHcC-----CCCCccCcCcCcccc
Confidence 9999999999887 6689999999999999999999999988 999999999998854
No 77
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.87 E-value=8.1e-22 Score=192.77 Aligned_cols=151 Identities=16% Similarity=0.121 Sum_probs=133.6
Q ss_pred cchhHHHhcCCchHHHHHHHC-CCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchhhhhH
Q 002053 422 ENCKWSCMFGEIEVPAEIVAG-GVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLR 500 (974)
Q Consensus 422 t~l~~Ac~fG~ieVV~~LL~~-Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL~~g~ 500 (974)
+++++||..|+.++++.|++. +++++ ..+..|.||||+ |.+|+ .+++ ++|+++|++++.+|..|.||+|...
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~~~~~--~~~~~g~t~L~~-~~~~~--~~~v--~~Ll~~g~~~~~~~~~g~t~L~~A~ 76 (156)
T 1bd8_A 4 DRLSGAAARGDVQEVRRLLHRELVHPD--ALNRFGKTALQV-MMFGS--TAIA--LELLKQGASPNVQDTSGTSPVHDAA 76 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCCTT--CCCTTSCCHHHH-SCTTC--HHHH--HHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred hHHHHHHHhCCHHHHHHHHHhhCcCcc--ccCCCCCcHHHH-HHcCC--HHHH--HHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 689999999999999999999 33666 678889999999 88888 7887 9999999999999999999987311
Q ss_pred HHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHHHHH
Q 002053 501 MQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQK 580 (974)
Q Consensus 501 ~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~lvk~ 580 (974)
. .+.. .+++.
T Consensus 77 ~---------------------------------------------------------------------~~~~-~~v~~ 86 (156)
T 1bd8_A 77 R---------------------------------------------------------------------TGFL-DTLKV 86 (156)
T ss_dssp H---------------------------------------------------------------------TTCH-HHHHH
T ss_pred H---------------------------------------------------------------------cCcH-HHHHH
Confidence 0 0001 16888
Q ss_pred HHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 002053 581 AAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIAL 650 (974)
Q Consensus 581 LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~ 650 (974)
|++.|++++.+|..|.||||+|+..|+.+++++|+++ ++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 87 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 87 LVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 8999999999999999999999999999999999999 99999999999999999999999999999874
No 78
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.87 E-value=3.2e-23 Score=218.96 Aligned_cols=190 Identities=12% Similarity=-0.026 Sum_probs=133.2
Q ss_pred cccchhHHHhcCCchHHHHHHHCCCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchhhhh
Q 002053 420 EAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENL 499 (974)
Q Consensus 420 ~~t~l~~Ac~fG~ieVV~~LL~~Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL~~g 499 (974)
+.|+++.|+..|+.++++.||++|++++. +..|.||||+||..|+ .+++ ++|++.|+++|.+|..|.||||..
T Consensus 5 g~t~L~~a~~~~~~~~~~~ll~~g~~~~~---~~~~~t~L~~A~~~g~--~~~v--~~Ll~~g~~~~~~d~~g~t~L~~A 77 (239)
T 1ycs_B 5 GQVSLPPGKRTNLRKTGSERIAHGMRVKF---NPLPLALLLDSSLEGE--FDLV--QRIIYEVDDPSLPNDEGITALHNA 77 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTC--HHHH--HHHTSTTSSCCCCCTTSCCHHHHH
T ss_pred ccccCchhhhhhhHHHHHHHhccCCCccc---CchhhHHHHHHHHcCC--HHHH--HHHHHcCCCCCCcCCCCCCHHHHH
Confidence 35899999999999999999999998884 3568999999999999 7887 999999999999999999999831
Q ss_pred HHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHHHH
Q 002053 500 RMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQ 579 (974)
Q Consensus 500 ~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~lvk 579 (974)
.. .+.. .+++
T Consensus 78 ~~---------------------------------------------------------------------~g~~-~~v~ 87 (239)
T 1ycs_B 78 VC---------------------------------------------------------------------AGHT-EIVK 87 (239)
T ss_dssp HH---------------------------------------------------------------------HTCH-HHHH
T ss_pred HH---------------------------------------------------------------------cCCH-HHHH
Confidence 10 0001 1788
Q ss_pred HHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCC-cHHHHH--HHcCCHHHHHHHHHcCCCCCC
Q 002053 580 KAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGW-TALHWA--AYCGRERTVASLIALGAAPGA 656 (974)
Q Consensus 580 ~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~-TpLH~A--a~~G~~eiV~lLL~~GAd~n~ 656 (974)
+|+++|+++|.+|..|+||||+||..|+.++|++|+++|++++.++..|. ||||+| +..|+.+++++|+++|++++.
T Consensus 88 ~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~ 167 (239)
T 1ycs_B 88 FLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGI 167 (239)
T ss_dssp HHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTT
T ss_pred HHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccc
Confidence 88899999999999999999999999999999999999999999998877 999999 888999999999999999887
Q ss_pred CCC---CCCCCCCCCCHHHHHHHcCcHHHHHHHHH
Q 002053 657 LSD---PTPKYPSGRTPADLASSIGHKGIAGYLAE 688 (974)
Q Consensus 657 ~~d---~~~kD~~G~TPLhlAa~~G~~eiv~lLLe 688 (974)
.+. ....+..+.+|+++|...|. ++.+|.+
T Consensus 168 ~~~~~~~al~d~~~~~~~eLa~~~G~--~i~vl~~ 200 (239)
T 1ycs_B 168 MNKGVIYALWDYEPQNDDELPMKEGD--CMTIIHR 200 (239)
T ss_dssp TGGGEEEESSCBCCSSTTBCCBCSSC--EEEECCC
T ss_pred cccceEEEEeccCCCCCCcccccCCC--EEEEEEe
Confidence 431 11236789999999988886 4444443
No 79
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.87 E-value=1.1e-21 Score=195.38 Aligned_cols=137 Identities=16% Similarity=0.060 Sum_probs=125.4
Q ss_pred HHHHHHHhhHHHHHHHHHhCCCC-CCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHH
Q 002053 565 VQKLLKEKLQVWLVQKAAEGGKG-PCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERT 643 (974)
Q Consensus 565 L~~a~~~~l~~~lvk~LL~~Gad-~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~ei 643 (974)
++.++..+..+ +++.|++.|.+ ++.+|..|+||||+||..|+.++|++|+++|++++.+|..|+||||+|+..|+.++
T Consensus 6 L~~A~~~g~~~-~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 84 (172)
T 3v30_A 6 IHQLAAQGELD-QLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDI 84 (172)
T ss_dssp HHHHHHTTCHH-HHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHH-HHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHH
Confidence 45555555554 78888888877 89999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHHhhh
Q 002053 644 VASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGA 713 (974)
Q Consensus 644 V~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~a~ 713 (974)
+++|+++|++++. +|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+..+.
T Consensus 85 v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~t~l~~A~ 143 (172)
T 3v30_A 85 VGLLLERDVDINI------YDWNGGTPLLYAVRGNHVKCVEALLARG-----ADLTTEADSGYTPMDLAV 143 (172)
T ss_dssp HHHHHTTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHH
T ss_pred HHHHHHcCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCccccCCCCCCHHHHHH
Confidence 9999999999877 6689999999999999999999999988 999999999999997764
No 80
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.86 E-value=3.6e-21 Score=185.18 Aligned_cols=123 Identities=24% Similarity=0.252 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCC
Q 002053 561 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 640 (974)
Q Consensus 561 ~~~lL~~a~~~~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~ 640 (974)
..+.++.++..+..+ +++.|++.|+++|.+|..|.||||+||..|+.+++++|+++|+++|.+|..|+||||+||..|+
T Consensus 14 ~~t~l~~A~~~g~~~-~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~ 92 (136)
T 2jab_A 14 LGKKLLEAARAGQDD-EVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGH 92 (136)
T ss_dssp HHHHHHHHHHHTCHH-HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred ccHHHHHHHHhCCHH-HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCC
Confidence 345566666666665 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 002053 641 ERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 690 (974)
Q Consensus 641 ~eiV~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~G 690 (974)
.++|++|+++|++++. +|..|.||||+|+..|+.+++++|++.|
T Consensus 93 ~~~v~~Ll~~g~~~~~------~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 93 LEIAEVLLKHGADVNA------QDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHHHHcCCCCcC------cCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999877 6689999999999999999999999875
No 81
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.86 E-value=2e-21 Score=186.77 Aligned_cols=117 Identities=25% Similarity=0.246 Sum_probs=109.1
Q ss_pred CCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 002053 585 GKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKY 664 (974)
Q Consensus 585 Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~~~d~~~kD 664 (974)
|+|+ .+|..|+||||+||..|+.+++++|+++|++++.+|..|+||||+||..|+.+++++|+++|++++. +|
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------~~ 73 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNT------TG 73 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CC
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccC------cC
Confidence 6788 7899999999999999999999999999999999999999999999999999999999999999877 66
Q ss_pred CCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHHhhh
Q 002053 665 PSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGA 713 (974)
Q Consensus 665 ~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~a~ 713 (974)
..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+..+.
T Consensus 74 ~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~tpl~~A~ 117 (137)
T 3c5r_A 74 YQNDSPLHDAAKNGHVDIVKLLLSYG-----ASRNAVNIFGLRPVDYTD 117 (137)
T ss_dssp GGGCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCGGGGCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCCCCCCCCHHHHHh
Confidence 89999999999999999999999988 999999999999997664
No 82
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.85 E-value=1.1e-21 Score=188.69 Aligned_cols=117 Identities=19% Similarity=0.157 Sum_probs=93.6
Q ss_pred CCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 002053 585 GKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKY 664 (974)
Q Consensus 585 Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~~~d~~~kD 664 (974)
++++|.+|..|.||||+||..|+.+++++|+++|+++|.+|..|+||||+||. |+.+++++|+++|++++. +|
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~------~~ 74 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNC------AD 74 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSC------CB
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCC------cC
Confidence 56778888888888888888888888888888888888888888888888888 888888888888887766 44
Q ss_pred CC-CCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHHhhh
Q 002053 665 PS-GRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGA 713 (974)
Q Consensus 665 ~~-G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~a~ 713 (974)
.. |.||||+|+..|+.+++++|+++| ++++.+|..|.||+..+.
T Consensus 75 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~d~~g~tpl~~A~ 119 (136)
T 1d9s_A 75 PATLTRPVHDAAREGFLDTLVVLHRAG-----ARLDVCDAWGRLPVDLAE 119 (136)
T ss_dssp TTTTBCHHHHHHHHTCHHHHHHHHHTC-----CCCCCCSSSSSCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCccCCCCCCHHHHHH
Confidence 66 788888888888888888888777 778888888888876654
No 83
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.85 E-value=1.5e-21 Score=192.26 Aligned_cols=143 Identities=15% Similarity=0.058 Sum_probs=112.6
Q ss_pred CCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchhhhhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHH
Q 002053 451 SQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNS 530 (974)
Q Consensus 451 ~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL~~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~ 530 (974)
..+.|.||||+||..|+ .+++ ++|+++|+++|.+|..|.||||.. . .
T Consensus 8 ~~~~~~t~L~~A~~~g~--~~~v--~~Ll~~g~~~~~~~~~g~t~L~~A-------------~---~------------- 54 (156)
T 1bi7_B 8 SMEPSADWLATAAARGR--VEEV--RALLEAGANPNAPNSYGRRPIQVM-------------M---M------------- 54 (156)
T ss_dssp --CCSTTHHHHHHHHTC--HHHH--HHHHTTTCCTTCCCSSSCCTTTSS-------------C---T-------------
T ss_pred CCccchHHHHHHHHcCC--HHHH--HHHHHcCCCCCCCCCCCCCHHHHH-------------H---c-------------
Confidence 46779999999999999 7887 999999999999999999999721 0 0
Q ss_pred HHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCc-HHHHHHHcCCHh
Q 002053 531 KISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQG-VLHFAAALGYDW 609 (974)
Q Consensus 531 ~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~lvk~LL~~Gad~n~~D~~G~T-pLH~Aa~~G~~e 609 (974)
+. . .++++|++.|+++|.+|..|.| |||+||..|+.+
T Consensus 55 ----------------------~~-------------------~-~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~ 92 (156)
T 1bi7_B 55 ----------------------GS-------------------A-RVAELLLLHGAEPNCADPATLTRPVHDAAREGFLD 92 (156)
T ss_dssp ----------------------TC-------------------H-HHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHH
T ss_pred ----------------------CC-------------------H-HHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHH
Confidence 00 0 1688899999999999999999 999999999999
Q ss_pred HHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHH
Q 002053 610 ALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLA 674 (974)
Q Consensus 610 iVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~~~d~~~kD~~G~TPLhlA 674 (974)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. +|..|.||.+-+
T Consensus 93 ~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~t~~~~~ 151 (156)
T 1bi7_B 93 TLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRG------SNHARIDAAEGP 151 (156)
T ss_dssp HHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------------
T ss_pred HHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCc------cCcCcCcccccC
Confidence 99999999999999999999999999999999999999999999987 568999998743
No 84
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.85 E-value=1.4e-21 Score=188.02 Aligned_cols=107 Identities=29% Similarity=0.310 Sum_probs=103.8
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCC-CCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 002053 577 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVN-GWTALHWAAYCGRERTVASLIALGAAPG 655 (974)
Q Consensus 577 lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~-G~TpLH~Aa~~G~~eiV~lLL~~GAd~n 655 (974)
+++.|++.|+++|.+|..|+||||+||. |+.+++++|+++|++++.+|.. |+||||+|+..|+.+++++|+++|++++
T Consensus 27 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 105 (136)
T 1d9s_A 27 TVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLD 105 (136)
T ss_dssp HHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCC
T ss_pred HHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 7899999999999999999999999999 9999999999999999999999 9999999999999999999999999987
Q ss_pred CCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 002053 656 ALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 690 (974)
Q Consensus 656 ~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~G 690 (974)
. +|..|.||||+|+..|+.+++++|+++|
T Consensus 106 ~------~d~~g~tpl~~A~~~~~~~~~~~Ll~~G 134 (136)
T 1d9s_A 106 V------CDAWGRLPVDLAEEQGHRDIARYLHAAT 134 (136)
T ss_dssp C------CSSSSSCHHHHHHHHTCHHHHHHHHHHH
T ss_pred c------cCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 7 6689999999999999999999999988
No 85
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.83 E-value=2.5e-21 Score=204.33 Aligned_cols=134 Identities=26% Similarity=0.263 Sum_probs=121.6
Q ss_pred HHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHH
Q 002053 567 KLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVAS 646 (974)
Q Consensus 567 ~a~~~~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~l 646 (974)
.++..+..+ +++.|++.|+++|.+|..|+||||+||..|+.++|++|+++|+++|.+|..|+||||+||..|+.++|++
T Consensus 27 ~A~~~g~~~-~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~ 105 (229)
T 2vge_A 27 DAALTGELE-VVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMA 105 (229)
T ss_dssp HHHHHTCHH-HHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHHHcCCHH-HHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 333333333 7899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCCCCCCCCCCCHHHHH--HHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHHh
Q 002053 647 LIALGAAPGALSDPTPKYPSGRTPADLA--SSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVT 711 (974)
Q Consensus 647 LL~~GAd~n~~~d~~~kD~~G~TPLhlA--a~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~ 711 (974)
|+++|++++..+ +..|+||||+| +..|+.+++++|+++| ++++.+|..|.||+..
T Consensus 106 Ll~~ga~~~~~~-----~~~g~tpL~~A~a~~~~~~~~v~~Ll~~g-----a~~~~~~~~~~~~l~~ 162 (229)
T 2vge_A 106 LVQHGAAIFATT-----LSDGATAFEKCDPYREGYADCATYLADVE-----QSMGLMNSGAVYALWD 162 (229)
T ss_dssp HHTTTCCTTCCC-----SSTTCCTGGGCCTTSTTHHHHHHHHHHHH-----HHTTTSGGGEEEESSC
T ss_pred HHHcCCCccccc-----CCCCCCHHHHHHHHhcChHHHHHHHHHcC-----CCcccccCCchHHHHH
Confidence 999999998732 26999999999 9999999999999988 9999999999888753
No 86
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.83 E-value=3.6e-20 Score=173.00 Aligned_cols=119 Identities=32% Similarity=0.357 Sum_probs=109.7
Q ss_pred HHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHH
Q 002053 565 VQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTV 644 (974)
Q Consensus 565 L~~a~~~~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV 644 (974)
++.++..+..+ +++.|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++
T Consensus 6 L~~A~~~~~~~-~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~ 84 (126)
T 1n0r_A 6 LHLAARNGHLE-VVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVV 84 (126)
T ss_dssp HHHHHHHTCHH-HHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHcCcHH-HHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHH
Confidence 44444444444 78899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 002053 645 ASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 690 (974)
Q Consensus 645 ~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~G 690 (974)
++|+++|++++. +|..|.||||+|+..|+.+++++|+++|
T Consensus 85 ~~Ll~~g~~~~~------~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 124 (126)
T 1n0r_A 85 KLLLEAGADVNA------KDKNGRTPLHLAARNGHLEVVKLLLEAG 124 (126)
T ss_dssp HHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHHT
T ss_pred HHHHHcCCCCcc------cCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 999999999877 6689999999999999999999999988
No 87
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.82 E-value=3.4e-20 Score=175.01 Aligned_cols=111 Identities=22% Similarity=0.165 Sum_probs=101.5
Q ss_pred cCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHH
Q 002053 592 DHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPA 671 (974)
Q Consensus 592 D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~~~d~~~kD~~G~TPL 671 (974)
+..|.||||+|+..|+.++++.|++.|++++.+|..|+||||+||..|+.+++++|+++|++++. +|..|+|||
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~d~~g~tpL 77 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA------PDKHHITPL 77 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTC------CCTTSCCHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCc------CCCCCCCHH
Confidence 45688999999999999999999999999999999999999999999999999999999999877 668999999
Q ss_pred HHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHHhhh
Q 002053 672 DLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGA 713 (974)
Q Consensus 672 hlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~a~ 713 (974)
|+|+..|+.+++++|+++| ++++.+|..|.||+..+.
T Consensus 78 ~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 78 LSAVYEGHVSCVKLLLSKG-----ADKTVKGPDGLTAFEATD 114 (123)
T ss_dssp HHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHCC
T ss_pred HHHHHcCCHHHHHHHHHcC-----CCCCCcCCCCCCHHHHhC
Confidence 9999999999999999988 999999999999997763
No 88
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.81 E-value=1.3e-20 Score=193.16 Aligned_cols=133 Identities=14% Similarity=-0.094 Sum_probs=112.1
Q ss_pred HHHHHhhHHHHHHHHHhCCCCCCccc-CCCCcHHHHHHHcCCH----hHHHHHHhCCCcccccCCCCCcHHHHHHHcCC-
Q 002053 567 KLLKEKLQVWLVQKAAEGGKGPCVLD-HCGQGVLHFAAALGYD----WALEPTTVAGVNINFRDVNGWTALHWAAYCGR- 640 (974)
Q Consensus 567 ~a~~~~l~~~lvk~LL~~Gad~n~~D-~~G~TpLH~Aa~~G~~----eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~- 640 (974)
.+++.+..+ .++.++..| ++.++ ..|+||||+|+..|+. +++++||++|++||.+|..|+||||+|+..|+
T Consensus 12 ~Aa~~g~~~-~~~~l~~~~--~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~ 88 (186)
T 3t8k_A 12 AAAMLGTYE-DFLELFEKG--YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGN 88 (186)
T ss_dssp HHHHHSCHH-HHHHHHHHS--SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTT
T ss_pred HHHHcCCHH-HHHHHHhcC--cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCc
Confidence 334444443 345555554 56666 7899999999999985 58999999999999999999999999999997
Q ss_pred -----HHHHHHHHHcCCCCCCCCCCCCCCCCCC-CHHHHHHHcC-----cHHHHHHHHH-cCCCCcccCCcccCCCCCCH
Q 002053 641 -----ERTVASLIALGAAPGALSDPTPKYPSGR-TPADLASSIG-----HKGIAGYLAE-SDLSSALSAISLNKKDGDVA 708 (974)
Q Consensus 641 -----~eiV~lLL~~GAd~n~~~d~~~kD~~G~-TPLhlAa~~G-----~~eiv~lLLe-~Gl~~h~adln~~d~~G~T~ 708 (974)
.++|++||++||++|. +|..|+ ||||+|+..| +.+++++|++ +| ++++++|..|.||
T Consensus 89 ~~~~~~~iv~~Ll~~Gadin~------~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~g-----ad~~~~d~~G~Tp 157 (186)
T 3t8k_A 89 DITGTTELCKIFLEKGADITA------LYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSG-----LQLLIKDKWGLTA 157 (186)
T ss_dssp CHHHHHHHHHHHHHTTCCSSS------CBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTT-----CCTTCCCTTSCCH
T ss_pred chhhHHHHHHHHHHCCCCCCc------cCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcC-----CCCcccCCCCCCH
Confidence 5789999999999988 668999 9999999954 4679999998 77 9999999999999
Q ss_pred HHhhh
Q 002053 709 EVTGA 713 (974)
Q Consensus 709 l~~a~ 713 (974)
+..+.
T Consensus 158 L~~A~ 162 (186)
T 3t8k_A 158 LEFVK 162 (186)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98774
No 89
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.81 E-value=1.1e-19 Score=163.42 Aligned_cols=91 Identities=37% Similarity=0.437 Sum_probs=86.7
Q ss_pred CCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHH
Q 002053 594 CGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADL 673 (974)
Q Consensus 594 ~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~~~d~~~kD~~G~TPLhl 673 (974)
+|+||||+||..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++. +|..|+||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~d~~g~t~l~~ 74 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA------KDKNGRTPLHL 74 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------cCCCCCCHHHH
Confidence 489999999999999999999999999999999999999999999999999999999999877 66899999999
Q ss_pred HHHcCcHHHHHHHHHcC
Q 002053 674 ASSIGHKGIAGYLAESD 690 (974)
Q Consensus 674 Aa~~G~~eiv~lLLe~G 690 (974)
|+..|+.+++++|+++|
T Consensus 75 A~~~~~~~~~~~Ll~~g 91 (93)
T 1n0q_A 75 AARNGHLEVVKLLLEAG 91 (93)
T ss_dssp HHHTTCHHHHHHHHHTT
T ss_pred HHHcCCHHHHHHHHHcC
Confidence 99999999999999988
No 90
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.81 E-value=3.8e-20 Score=192.24 Aligned_cols=128 Identities=21% Similarity=0.201 Sum_probs=99.2
Q ss_pred HHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhC-CCcccccCCCCCcHHHHHHHcCCHHHHH
Q 002053 567 KLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVA-GVNINFRDVNGWTALHWAAYCGRERTVA 645 (974)
Q Consensus 567 ~a~~~~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~-GAdvn~~D~~G~TpLH~Aa~~G~~eiV~ 645 (974)
.++..+..+ +++.|++.|+++|.+|..|+||||+||..|+.++|++|+++ |+++|.+|..|+||||+||..|+.++|+
T Consensus 79 ~A~~~g~~~-~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~ 157 (222)
T 3ehr_A 79 EAAKRGNLS-WLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQ 157 (222)
T ss_dssp HHHHHTCHH-HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred cccccCcHH-HHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHH
Confidence 333333333 78889999999999999999999999999999999999998 9999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCC
Q 002053 646 SLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGD 706 (974)
Q Consensus 646 lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~ 706 (974)
+|+++|++++. +|..|.||||+|+..|+.++++.|++.| +..++++.+|+
T Consensus 158 ~Ll~~ga~~~~------~~~~g~t~l~~A~~~~~~~~l~~l~~~~-----~~~~~~~~~~~ 207 (222)
T 3ehr_A 158 LLLAKGARTDL------RNIEKKLAFDMATNAACASLLKKKQGTD-----AVRTLSNAEDY 207 (222)
T ss_dssp HHHHHTCCSCC------CCTTSCCHHHHCCSHHHHHHHC----------------------
T ss_pred HHHHcCCCCcc------ccCCCCCHHHHhcchhHHHHHHHHhccc-----hhhhccchhhh
Confidence 99999999877 6689999999999999999999999888 77777776654
No 91
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.80 E-value=3.5e-22 Score=227.18 Aligned_cols=229 Identities=10% Similarity=-0.031 Sum_probs=139.2
Q ss_pred cchhHHHhcCCchHHHHHHHCCCCcCC-CCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCC---ccccCCCCchhh
Q 002053 422 ENCKWSCMFGEIEVPAEIVAGGVLRCH-TSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDV---DVADNCGDITSE 497 (974)
Q Consensus 422 t~l~~Ac~fG~ieVV~~LL~~Ga~i~~-~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdv---na~D~~G~TpL~ 497 (974)
|++++||..|+.++|++|++.|+.... ...+..|.||||+||.+|+ .+++ ++|+++|+++ +..+.. .||||
T Consensus 94 T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~--~eiv--~~Ll~~gad~~~~~i~~~~-~TpLh 168 (376)
T 2aja_A 94 VICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGH--LHVL--NRLCELAPTEIMAMIQAEN-YHAFR 168 (376)
T ss_dssp HHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTC--HHHH--HHHHHSCTTTHHHHHSHHH-HHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCC--HHHH--HHHHhCCCCccccccCCCC-CCHHH
Confidence 788999999999999999999872211 1234568899999999998 8888 9999999763 222222 78888
Q ss_pred ----hhHHHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhh
Q 002053 498 ----NLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKL 573 (974)
Q Consensus 498 ----~g~~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l 573 (974)
.++.+++++|+..+..... . . .+..++++|+.++. ..+.
T Consensus 169 ~Aa~~G~~eiv~~Ll~~ga~~~~-------~----------~--~d~~g~TpL~~Aa~------------------~~G~ 211 (376)
T 2aja_A 169 LAAENGHLHVLNRLCELAPTEAT-------A----------M--IQAENYYAFRWAAV------------------GRGH 211 (376)
T ss_dssp HHHHTTCHHHHHHHHHSCGGGHH-------H----------H--HHHHHHHHHHHHHS------------------TTCC
T ss_pred HHHHCCCHHHHHHHHHcCCccch-------h----------c--cCCCCCCHHHHHHH------------------HCCC
Confidence 4777888887754332100 0 0 00234445444330 2222
Q ss_pred HHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHH-----------
Q 002053 574 QVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRER----------- 642 (974)
Q Consensus 574 ~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~e----------- 642 (974)
.+ ++++|++.|+ .|.||||+|+..|+.+++++|+++|++++..+. ++++|+..|+.+
T Consensus 212 ~e-iv~~Ll~~ga-------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~~----~l~~A~~~g~~~vv~~~~~~~~~ 279 (376)
T 2aja_A 212 HN-VINFLLDCPV-------MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHD----AFKLSNPDGVFDLVTKSECLQGF 279 (376)
T ss_dssp HH-HHHHHTTSHH-------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHT----TTTTTSSSSCCCCSSHHHHHHHH
T ss_pred HH-HHHHHHhCCC-------ccchHHHHHHHCCCHHHHHHHHhcCcccccccH----HHHHHHHCCChhhhcHHhhhhhH
Confidence 22 7778877664 277888888888888888888888888776542 455555555544
Q ss_pred ----------------HHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCC
Q 002053 643 ----------------TVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGD 706 (974)
Q Consensus 643 ----------------iV~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~ 706 (974)
.+++|++.++ +....+.......+.||||+|+..|+.++|++|++.| .+++..|.
T Consensus 280 ~~~~~li~~~~~~~~~~~~~Ll~~~~-vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~~~--------~v~~~~~~ 350 (376)
T 2aja_A 280 YMLRNLIRRNDEVLLDDIRFLLSIPG-IKALAPTATIPGDANELLRLALRLGNQGACALLLSIP--------SVLALTKA 350 (376)
T ss_dssp HHHHHHHHHCCGGGHHHHHHHHTSTT-TGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTSH--------HHHHSCC-
T ss_pred HHHHHHHHcchhhHHHHHHHHHhChh-hhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHHcCh--------HHHHHHHH
Confidence 2333333211 0000000111245679999999999999999999755 67777888
Q ss_pred CHHHhhh
Q 002053 707 VAEVTGA 713 (974)
Q Consensus 707 T~l~~a~ 713 (974)
|+...+.
T Consensus 351 ~~~~~~~ 357 (376)
T 2aja_A 351 NNYYINE 357 (376)
T ss_dssp -------
T ss_pred hcccccc
Confidence 8865554
No 92
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.80 E-value=1.3e-19 Score=171.14 Aligned_cols=113 Identities=27% Similarity=0.209 Sum_probs=100.2
Q ss_pred HHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHH
Q 002053 563 KLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRER 642 (974)
Q Consensus 563 ~lL~~a~~~~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~e 642 (974)
+.++.++..+..+ +++.|++.|++++.+|..|+||||+||..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+
T Consensus 9 ~~l~~A~~~~~~~-~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~ 87 (123)
T 3aaa_C 9 KEFMWALKNGDLD-EVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVS 87 (123)
T ss_dssp HHHHHHHHTTCHH-HHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred hHHHHHHHcCCHH-HHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHH
Confidence 4455566555554 788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHH
Q 002053 643 TVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGI 682 (974)
Q Consensus 643 iV~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~ei 682 (974)
+|++|+++|++++. +|..|.||||+|+..+..++
T Consensus 88 ~v~~Ll~~ga~~~~------~~~~g~t~l~~A~~~~~~~l 121 (123)
T 3aaa_C 88 CVKLLLSKGADKTV------KGPDGLTAFEATDNQAIKAL 121 (123)
T ss_dssp HHHHHHHTTCCTTC------CCTTSCCHHHHCCCHHHHHH
T ss_pred HHHHHHHcCCCCCC------cCCCCCCHHHHhCCHHHHHH
Confidence 99999999999877 66899999999955444443
No 93
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.80 E-value=1.8e-19 Score=173.27 Aligned_cols=112 Identities=29% Similarity=0.225 Sum_probs=104.8
Q ss_pred ccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCH
Q 002053 591 LDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTP 670 (974)
Q Consensus 591 ~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~~~d~~~kD~~G~TP 670 (974)
....|.||||+||..|+.+++++|+++|+++|.+|..|+||||+||..|+.+++++|+++|++++. +|..|.||
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~d~~g~t~ 83 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNA------VDAIGFTP 83 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC------CCTTCCCH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------CCCCCCCH
Confidence 345689999999999999999999999999999999999999999999999999999999999877 66899999
Q ss_pred HHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHHhhh
Q 002053 671 ADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGA 713 (974)
Q Consensus 671 LhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~a~ 713 (974)
||+|+..|+.+++++|+++| ++++.+|..|.||+..|.
T Consensus 84 L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~tpl~~A~ 121 (136)
T 2jab_A 84 LHLAAFIGHLEIAEVLLKHG-----ADVNAQDKFGKTAFDISI 121 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcC-----CCCcCcCCCCCCHHHHHH
Confidence 99999999999999999988 999999999999997764
No 94
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.79 E-value=3.9e-19 Score=166.00 Aligned_cols=109 Identities=34% Similarity=0.407 Sum_probs=104.1
Q ss_pred CCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHH
Q 002053 594 CGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADL 673 (974)
Q Consensus 594 ~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~~~d~~~kD~~G~TPLhl 673 (974)
+|+||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. +|..|.||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------~~~~g~t~l~~ 74 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA------KDKNGRTPLHL 74 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC------CCTTSCCHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcc------cCCCCCcHHHH
Confidence 589999999999999999999999999999999999999999999999999999999999877 66899999999
Q ss_pred HHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHHhhh
Q 002053 674 ASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGA 713 (974)
Q Consensus 674 Aa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~a~ 713 (974)
|+..|+.+++++|+++| ++++.+|..|.||+..+.
T Consensus 75 A~~~~~~~~~~~Ll~~g-----~~~~~~~~~g~t~l~~A~ 109 (126)
T 1n0r_A 75 AARNGHLEVVKLLLEAG-----ADVNAKDKNGRTPLHLAA 109 (126)
T ss_dssp HHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHH
T ss_pred HHHcChHHHHHHHHHcC-----CCCcccCCCCCCHHHHHH
Confidence 99999999999999988 999999999999997775
No 95
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.79 E-value=8.9e-20 Score=169.88 Aligned_cols=109 Identities=28% Similarity=0.314 Sum_probs=102.0
Q ss_pred cccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCC
Q 002053 590 VLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRT 669 (974)
Q Consensus 590 ~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~~~d~~~kD~~G~T 669 (974)
.+|..|+||||+||..|+.+++++|+++|++++.+|..|+||||+||..|+.+++++|+++|++++. +|..|.|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------~d~~g~t 77 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNA------RSKDGNT 77 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTC------CCTTCCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcc------cCCCCCC
Confidence 4788999999999999999999999999999999999999999999999999999999999999877 6689999
Q ss_pred HHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHH
Q 002053 670 PADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAE 709 (974)
Q Consensus 670 PLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l 709 (974)
|||+|+..|+.+++++|+++| ++++.++..|.+|-
T Consensus 78 pl~~A~~~~~~~~~~~Ll~~g-----a~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 78 PEHLAKKNGHHEIVKLLDAKG-----ADVNARSWGSSHHH 112 (115)
T ss_dssp TTHHHHTTTCHHHHHHHHTTS-----SSHHHHSCCCC---
T ss_pred HHHHHHHCCCHHHHHHHHHcC-----CCCCcCCccccccc
Confidence 999999999999999999988 99999999999873
No 96
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.79 E-value=3.1e-18 Score=186.25 Aligned_cols=119 Identities=18% Similarity=0.149 Sum_probs=106.6
Q ss_pred HHHHHHHhhHHHHHHHHHhCCCCCC------cccCCCCcHHHHHHHc---CCHhHHHHHHhCCCcccccCCCCCcHHHHH
Q 002053 565 VQKLLKEKLQVWLVQKAAEGGKGPC------VLDHCGQGVLHFAAAL---GYDWALEPTTVAGVNINFRDVNGWTALHWA 635 (974)
Q Consensus 565 L~~a~~~~l~~~lvk~LL~~Gad~n------~~D~~G~TpLH~Aa~~---G~~eiVklLL~~GAdvn~~D~~G~TpLH~A 635 (974)
++.++..+... .+..++..|++++ ..|..|+||||+||.. |+.+++++|+++|+++|.+|..|+||||+|
T Consensus 134 l~~a~~~~d~~-~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A 212 (278)
T 1dcq_A 134 LCEAVKTRDIF-GLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYC 212 (278)
T ss_dssp HHHHHHTTCHH-HHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHH
T ss_pred hhhHhhhcccH-HHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHH
Confidence 44444444444 5777889999954 4488999999999999 899999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 002053 636 AYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 690 (974)
Q Consensus 636 a~~G~~eiV~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~G 690 (974)
|..|+.++|++||++||+++. +|..|.||||+|+..|+.+++++|+++|
T Consensus 213 ~~~g~~~~v~~Ll~~gad~~~------~d~~g~tpL~~A~~~~~~~~v~~Ll~~g 261 (278)
T 1dcq_A 213 CLTDNAECLKLLLRGKASIEI------ANESGETPLDIAKRLKHEHCEELLTQAL 261 (278)
T ss_dssp HHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCC------ccCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 999999999999999999887 6689999999999999999999999988
No 97
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.79 E-value=8e-20 Score=175.51 Aligned_cols=108 Identities=25% Similarity=0.206 Sum_probs=100.4
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 002053 577 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA 656 (974)
Q Consensus 577 lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~ 656 (974)
+++.|++.|++++.+|..|.||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 25 ~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 104 (137)
T 3c5r_A 25 SVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA 104 (137)
T ss_dssp HHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 002053 657 LSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 690 (974)
Q Consensus 657 ~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~G 690 (974)
+|..|.||||+|+..++.+++.+|.+.+
T Consensus 105 ------~~~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 105 ------VNIFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp ------CCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred ------CCCCCCCHHHHHhhccHHHHHhhccccc
Confidence 6689999999999999999998887655
No 98
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.78 E-value=5.8e-19 Score=207.07 Aligned_cols=132 Identities=20% Similarity=0.142 Sum_probs=111.7
Q ss_pred HHHHHHHHhhHHHHHHHHHhCCCCCCcc------cCCCCcHHHHHHH---cCCHhHHHHHHhCCCcccccCCCCCcHHHH
Q 002053 564 LVQKLLKEKLQVWLVQKAAEGGKGPCVL------DHCGQGVLHFAAA---LGYDWALEPTTVAGVNINFRDVNGWTALHW 634 (974)
Q Consensus 564 lL~~a~~~~l~~~lvk~LL~~Gad~n~~------D~~G~TpLH~Aa~---~G~~eiVklLL~~GAdvn~~D~~G~TpLH~ 634 (974)
.|+.++..+... +++.|++.|+++|.. |..|.||||+||. .|+.++|++||++|+++|.+|..|+||||+
T Consensus 135 ~L~~A~~~g~~~-~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~ 213 (497)
T 3lvq_E 135 RLWTAICNRDLL-SVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 213 (497)
T ss_dssp HHHHHHHHTCHH-HHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHH
T ss_pred HHHHHHhccCHH-HHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHH
Confidence 455666666555 789999999999988 8899999999977 899999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCC
Q 002053 635 AAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDV 707 (974)
Q Consensus 635 Aa~~G~~eiV~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T 707 (974)
||..|+.++|++||++||+++. +|..|+||||+|+..|+.+++++|+++| ++++.....+.+
T Consensus 214 A~~~g~~~~v~~Ll~~ga~~~~------~d~~g~tpl~~A~~~~~~~~~~~Ll~~g-----a~~~~~~~h~~~ 275 (497)
T 3lvq_E 214 AALYNQPDCLKLLLKGRALVGT------VNEAGETALDIARKKHHKECEELLEQAQ-----AGTFAFPLHVDY 275 (497)
T ss_dssp HTTTTCHHHHHHHHHTCCCCSC------CCTTCCCHHHHHHHTTCHHHHHHHHHTC-----C-----------
T ss_pred HHHcCCHHHHHHHHHcCCCCCC------cCCCCCCHHHHHHHcCCHHHHHHHHHhC-----CCCCCCcceeec
Confidence 9999999999999999999987 6689999999999999999999999998 777775444433
No 99
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.78 E-value=4.5e-19 Score=195.19 Aligned_cols=131 Identities=19% Similarity=0.154 Sum_probs=114.5
Q ss_pred HHHHHHHhhHHHHHHHHHhCCCCCCc------ccCCCCcHHHHHHHc---CCHhHHHHHHhCCCcccccCCCCCcHHHHH
Q 002053 565 VQKLLKEKLQVWLVQKAAEGGKGPCV------LDHCGQGVLHFAAAL---GYDWALEPTTVAGVNINFRDVNGWTALHWA 635 (974)
Q Consensus 565 L~~a~~~~l~~~lvk~LL~~Gad~n~------~D~~G~TpLH~Aa~~---G~~eiVklLL~~GAdvn~~D~~G~TpLH~A 635 (974)
|+.++..+... .++.|++.|++++. .|..|.||||+||.. |+.+++++||++|+++|.+|..|+||||+|
T Consensus 155 L~~A~~~g~~~-~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A 233 (301)
T 2b0o_E 155 LWTAICNRDLL-SVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYA 233 (301)
T ss_dssp HHHHHHTTCHH-HHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHH
T ss_pred HhhhhhccCHH-HHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHH
Confidence 44445544444 57778899999998 699999999999997 899999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHHhhh
Q 002053 636 AYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGA 713 (974)
Q Consensus 636 a~~G~~eiV~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~a~ 713 (974)
+..|+.++|++||++||+++. +|..|.||||+|+..|+.+++++|+++| ++ .|.||+..|.
T Consensus 234 ~~~g~~~~v~~Ll~~gad~~~------~d~~G~TpL~~A~~~~~~~iv~~Ll~~g-----a~------~g~tpLh~A~ 294 (301)
T 2b0o_E 234 ALYNQPDCLKLLLKGRALVGT------VNEAGETALDIARKKHHKECEELLEQAQ-----AG------TFAFPLHVDY 294 (301)
T ss_dssp HHTTCHHHHHHHHHTTCCCSC------CCTTSCCHHHHHHHHTCHHHHHHHHHHH-----HH------TTSSCCC---
T ss_pred HHcCCHHHHHHHHHcCCCCCC------cCCCCCCHHHHHHHcCCHHHHHHHHHhc-----CC------CCCChhHHHH
Confidence 999999999999999999887 6689999999999999999999999988 44 5788886653
No 100
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.78 E-value=2.7e-19 Score=185.84 Aligned_cols=112 Identities=23% Similarity=0.151 Sum_probs=106.6
Q ss_pred ccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCCCCCCC
Q 002053 591 LDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIAL-GAAPGALSDPTPKYPSGRT 669 (974)
Q Consensus 591 ~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~-GAd~n~~~d~~~kD~~G~T 669 (974)
.|..|.||||+||..|+.++|+.|++.|+++|.+|..|+||||+||..|+.++|++|+++ |++++. +|..|+|
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~------~d~~g~t 142 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQ------QNKLGDT 142 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCC------CCTTSCC
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccc------cCCCCCC
Confidence 567899999999999999999999999999999999999999999999999999999999 999887 6689999
Q ss_pred HHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHHhhh
Q 002053 670 PADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGA 713 (974)
Q Consensus 670 PLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~a~ 713 (974)
|||+|+..|+.+++++|+++| ++++++|..|.||+..|.
T Consensus 143 pL~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~t~l~~A~ 181 (222)
T 3ehr_A 143 ALHAAAWKGYADIVQLLLAKG-----ARTDLRNIEKKLAFDMAT 181 (222)
T ss_dssp HHHHHHHHTCHHHHHHHHHHT-----CCSCCCCTTSCCHHHHCC
T ss_pred HHHHHHHcCCHHHHHHHHHcC-----CCCccccCCCCCHHHHhc
Confidence 999999999999999999998 999999999999997664
No 101
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.78 E-value=3.4e-19 Score=180.21 Aligned_cols=112 Identities=21% Similarity=0.144 Sum_probs=101.5
Q ss_pred cCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC-CCCCCH
Q 002053 592 DHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKY-PSGRTP 670 (974)
Q Consensus 592 D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~~~d~~~kD-~~G~TP 670 (974)
+..|.||||+||..|+.++++.|++ |+++|.+|..|+||||+||..|+.++|++|+++|++++. +| ..|+||
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~~g~tp 113 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDH------RDMRGGLTA 113 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC------CCSSSSCCH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------CCCCCCCCH
Confidence 4578999999999999999999999 999999999999999999999999999999999999877 44 789999
Q ss_pred HHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHHhhhhh
Q 002053 671 ADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGATA 715 (974)
Q Consensus 671 LhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~a~~~ 715 (974)
||+|+..|+.+++++|+++| ++++.+|..|.||+..+...
T Consensus 114 L~~A~~~~~~~~v~~Ll~~g-----a~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 114 LHMAAGYVRPEVVEALVELG-----ADIEVEDERGLTALELAREI 153 (183)
T ss_dssp HHHHHHTTCHHHHHHHHHHT-----CCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHhcCcHHHHHHHHHcC-----CCCcCCCCCCCCHHHHHHHh
Confidence 99999999999999999988 99999999999999877654
No 102
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.78 E-value=1.3e-18 Score=176.08 Aligned_cols=109 Identities=29% Similarity=0.325 Sum_probs=97.9
Q ss_pred HHHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccC-CCCCcHHHHHHHcCC
Q 002053 562 EKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRD-VNGWTALHWAAYCGR 640 (974)
Q Consensus 562 ~~lL~~a~~~~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D-~~G~TpLH~Aa~~G~ 640 (974)
.+.++.++..+..+ +++.|++ |+++|.+|..|+||||+||..|+.+++++|+++|+++|.+| ..|+||||+|+..|+
T Consensus 45 ~t~L~~A~~~g~~~-~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~ 122 (183)
T 3deo_A 45 ETPWWTAARKADEQ-ALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVR 122 (183)
T ss_dssp HHHHHHHHHTTCHH-HHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHH-HHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCc
Confidence 45566666665554 7888888 99999999999999999999999999999999999999998 889999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcC
Q 002053 641 ERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIG 678 (974)
Q Consensus 641 ~eiV~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G 678 (974)
.+++++|+++|++++. +|..|.||||+|+..+
T Consensus 123 ~~~v~~Ll~~ga~~~~------~d~~g~tpl~~A~~~~ 154 (183)
T 3deo_A 123 PEVVEALVELGADIEV------EDERGLTALELAREIL 154 (183)
T ss_dssp HHHHHHHHHHTCCTTC------CCTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCcC------CCCCCCCHHHHHHHhc
Confidence 9999999999999887 6689999999998764
No 103
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.77 E-value=2.8e-19 Score=196.81 Aligned_cols=92 Identities=20% Similarity=0.040 Sum_probs=79.1
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 002053 577 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA 656 (974)
Q Consensus 577 lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~ 656 (974)
++++|++.|+++|.+|..|+||||+||..|+.++|++||++|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 208 iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~--- 284 (301)
T 2b0o_E 208 LVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG--- 284 (301)
T ss_dssp HHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH---
T ss_pred HHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC---
Confidence 57777888999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCcH
Q 002053 657 LSDPTPKYPSGRTPADLASSIGHK 680 (974)
Q Consensus 657 ~~d~~~kD~~G~TPLhlAa~~G~~ 680 (974)
.|.||||+|+..|+.
T Consensus 285 ---------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 285 ---------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp ---------TTSSCCC--------
T ss_pred ---------CCCChhHHHHhcCCc
Confidence 478999999998874
No 104
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.77 E-value=1.7e-18 Score=183.99 Aligned_cols=121 Identities=28% Similarity=0.323 Sum_probs=107.7
Q ss_pred HHHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccC-CCCCcHHHHHHHcCC
Q 002053 562 EKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRD-VNGWTALHWAAYCGR 640 (974)
Q Consensus 562 ~~lL~~a~~~~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D-~~G~TpLH~Aa~~G~ 640 (974)
.+.++.++..+..+ +++.|++ |+++|.+|..|+||||+||..|+.++|++|+++|+++|.+| ..|+||||+||..|+
T Consensus 46 ~t~L~~A~~~g~~~-~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~ 123 (244)
T 3ui2_A 46 ETPWWTAARKADEQ-ALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVR 123 (244)
T ss_dssp HHHHHHHHTTTCHH-HHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHH-HHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCC
Confidence 44556666555554 7888898 99999999999999999999999999999999999999999 889999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHH----------------HcCcHHHHHHHHHcC
Q 002053 641 ERTVASLIALGAAPGALSDPTPKYPSGRTPADLAS----------------SIGHKGIAGYLAESD 690 (974)
Q Consensus 641 ~eiV~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa----------------~~G~~eiv~lLLe~G 690 (974)
.++|++|+++|++++. +|..|.||||+|+ ..|+.+++++|++.+
T Consensus 124 ~~~v~~Ll~~ga~~~~------~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~ 183 (244)
T 3ui2_A 124 PEVVEALVELGADIEV------EDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQV 183 (244)
T ss_dssp HHHHHHHHHTTCCTTC------CCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCC------CCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhc
Confidence 9999999999999887 5688888888887 678999999999865
No 105
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.77 E-value=1.4e-18 Score=197.02 Aligned_cols=139 Identities=19% Similarity=0.154 Sum_probs=112.4
Q ss_pred HHHHHHHHHH-hhHHHHHHHHHhCCCCCCccc--CCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHc
Q 002053 562 EKLVQKLLKE-KLQVWLVQKAAEGGKGPCVLD--HCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYC 638 (974)
Q Consensus 562 ~~lL~~a~~~-~l~~~lvk~LL~~Gad~n~~D--~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~ 638 (974)
.+.|+.++.. +..+ +++.|++.|+++|..| ..|.||||+||..|+.++|++||++|+++|.+|..|+||||+|+..
T Consensus 200 ~t~L~~Aa~~~g~~~-~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~ 278 (368)
T 3jue_A 200 GALLFRASGHPPSLP-TMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATIL 278 (368)
T ss_dssp HHHHHHHTSSSCCHH-HHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CcHHHHHHHccCCHH-HHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 3466666665 4444 7889999999999998 8999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHH
Q 002053 639 GRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAE 709 (974)
Q Consensus 639 G~~eiV~lLL~~GAd~n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l 709 (974)
|+.++|++||++|++++. +|..|.||||+|+..|+.+++++|+..+ ...++....+..+.|++
T Consensus 279 g~~~~v~~LL~~Gad~~~------~d~~G~TpL~~A~~~g~~~iv~lLl~~~--~~~~~~~~~~~~~~t~l 341 (368)
T 3jue_A 279 GHTGLACLFLKRGADLGA------RDSEGRDPLTIAMETANADIVTLLRLAK--MREAEAAQGQAGDETYL 341 (368)
T ss_dssp TCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHHH--C----------------
T ss_pred CcHHHHHHHHHCcCCCCC------cCCCCCCHHHHHHHCCCHHHHHHHHHcC--CCcccccccCCCCCCHH
Confidence 999999999999999887 6689999999999999999999999877 22334444455566654
No 106
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.76 E-value=2.1e-20 Score=212.51 Aligned_cols=183 Identities=10% Similarity=0.057 Sum_probs=139.7
Q ss_pred cchhHHHh-cCCchHHHHHHHCCCCcCCCCCCCCCChhHHHHHhcCCCccchhhhhhhhcCCCCCccccCCCCchhhhhH
Q 002053 422 ENCKWSCM-FGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLR 500 (974)
Q Consensus 422 t~l~~Ac~-fG~ieVV~~LL~~Ga~i~~~~~~~~G~TPLhvA~~ng~~~seVv~feyLl~~GAdvna~D~~G~TpL~~g~ 500 (974)
+++.+++. +++.+++++|++.|++ +.||||+||.+|+ .+++ ++|+++|+.....+.
T Consensus 67 l~~~~a~~~~~~~~~~~~l~~~g~~---------~~T~Lh~Aa~~G~--~e~v--~~Ll~~ga~~~~~~~---------- 123 (376)
T 2aja_A 67 LCLYYAHYNRNAKQLWSDAHKKGIK---------SEVICFVAAITGC--SSAL--DTLCLLLTSDEIVKV---------- 123 (376)
T ss_dssp HHHHHHHTTTTCTTHHHHHHHHTCC---------HHHHHHHHHHHCC--HHHH--HHHTTC--CCSSCC-----------
T ss_pred HHHHHHHhcCCCHHHHHHHHHcCCC---------cCCHHHHHHHcCC--HHHH--HHHHHcCCcHHHHHH----------
Confidence 35556666 6888999999999874 3499999999999 8888 999988772211100
Q ss_pred HHHHHHHhhcCCCCCCCCCCChhhhHHhHHHHhhhhccCCCchhHHHHHhhhcCCChHHHHHHHHHHHHHHhhHHHHHHH
Q 002053 501 MQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQK 580 (974)
Q Consensus 501 ~~ivkLLl~g~~~~~~~~~~~~~~~~~l~~~l~~Ll~~~~~~~t~L~~~~~~~~~s~~~~~~~lL~~a~~~~l~~~lvk~ 580 (974)
. +..+.++|+ .++..+..+ ++++
T Consensus 124 ----------------~---------------------~~~~~tpL~-------------------~Aa~~G~~e-iv~~ 146 (376)
T 2aja_A 124 ----------------I---------------------QAENYQAFR-------------------LAAENGHLH-VLNR 146 (376)
T ss_dssp --------------------------------------CHHHHHHHH-------------------HHHHTTCHH-HHHH
T ss_pred ----------------h---------------------ccCCCCHHH-------------------HHHHcCCHH-HHHH
Confidence 0 011223333 333333333 7888
Q ss_pred HHhCCCCC---CcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccc--cCCCCCcHHHHHH-HcCCHHHHHHHHHcCCCC
Q 002053 581 AAEGGKGP---CVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINF--RDVNGWTALHWAA-YCGRERTVASLIALGAAP 654 (974)
Q Consensus 581 LL~~Gad~---n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~--~D~~G~TpLH~Aa-~~G~~eiV~lLL~~GAd~ 654 (974)
|+++|+++ +..+.+ .||||+||..|+.++|++|+++|++++. +|..|+||||+|| ..|+.++|++|+++|+
T Consensus 147 Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-- 223 (376)
T 2aja_A 147 LCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-- 223 (376)
T ss_dssp HHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH--
T ss_pred HHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC--
Confidence 99999763 222333 9999999999999999999999999988 8999999999999 9999999999999774
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCC
Q 002053 655 GALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKK 703 (974)
Q Consensus 655 n~~~d~~~kD~~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~ 703 (974)
.|.||||+|+..|+.+++++|++.| ++++.++.
T Consensus 224 -----------~~~taL~~Aa~~g~~evv~lL~~~g-----a~~~~~~~ 256 (376)
T 2aja_A 224 -----------MLAYAEIHEFEYGEKYVNPFIARHV-----NRLKEMHD 256 (376)
T ss_dssp -----------HHHHHHHCTTTTTTTTHHHHHHHHH-----HHHHHHHT
T ss_pred -----------ccchHHHHHHHCCCHHHHHHHHhcC-----cccccccH
Confidence 3789999999999999999999988 77766554
No 107
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.76 E-value=9.5e-19 Score=185.86 Aligned_cols=111 Identities=22% Similarity=0.147 Sum_probs=104.7
Q ss_pred cCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC-CCCCCH
Q 002053 592 DHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKY-PSGRTP 670 (974)
Q Consensus 592 D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~~~d~~~kD-~~G~TP 670 (974)
+..|.||||+||..|+.++|+.|++ |+++|.+|..|+||||+||..|+.++|++|+++|++++. +| ..|.||
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~------~~~~~g~t~ 114 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDH------RDMRGGLTA 114 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC------CCSSSCCCH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCc------CCCCCCCCH
Confidence 3468999999999999999999999 999999999999999999999999999999999999987 44 789999
Q ss_pred HHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHHhhhh
Q 002053 671 ADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGAT 714 (974)
Q Consensus 671 LhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~a~~ 714 (974)
||+|+..|+.+++++|+++| ++++.+|..|.||+..+..
T Consensus 115 L~~A~~~g~~~~v~~Ll~~g-----a~~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 115 LHMAAGYVRPEVVEALVELG-----ADIEVEDERGLTALELARE 153 (244)
T ss_dssp HHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCC-----CCCCCCCCCCCcHHHHHHH
Confidence 99999999999999999988 9999999999999988864
No 108
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.75 E-value=2.3e-18 Score=201.96 Aligned_cols=80 Identities=21% Similarity=0.055 Sum_probs=70.1
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 002053 577 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA 656 (974)
Q Consensus 577 lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~ 656 (974)
++++|+++|+++|.+|..|+||||+||..|+.++|++||++||++|.+|..|+||||+|+..|+.+++++|+++||+++.
T Consensus 189 ~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 189 LVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp HHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC----
T ss_pred HHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC
Confidence 56677778899999999999999999999999999999999999999999999999999999999999999999998765
No 109
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.69 E-value=4.4e-17 Score=151.58 Aligned_cols=93 Identities=28% Similarity=0.262 Sum_probs=85.1
Q ss_pred CCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCC
Q 002053 588 PCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSG 667 (974)
Q Consensus 588 ~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~~~d~~~kD~~G 667 (974)
+...|.+|.||||+||..|+.+++++|+++|+++|.+|..|+||||+||..|+.+++++|+++|++++. +|..|
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~------~d~~g 90 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXA------QDKFG 90 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTS
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc------cccCC
Confidence 445788999999999999999999999999999999999999999999999999999999999999877 66899
Q ss_pred CCHHHHHHHcCcHHHHHHH
Q 002053 668 RTPADLASSIGHKGIAGYL 686 (974)
Q Consensus 668 ~TPLhlAa~~G~~eiv~lL 686 (974)
+||||+|+..|+.+++++|
T Consensus 91 ~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 91 KTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CCHHHHHHHHTCHHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHh
Confidence 9999999999999999987
No 110
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.66 E-value=2.8e-16 Score=141.14 Aligned_cols=88 Identities=30% Similarity=0.300 Sum_probs=80.4
Q ss_pred HHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHH
Q 002053 565 VQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTV 644 (974)
Q Consensus 565 L~~a~~~~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV 644 (974)
++.++..+..+ +++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++
T Consensus 6 L~~A~~~~~~~-~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~ 84 (93)
T 1n0q_A 6 LHLAARNGHLE-VVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVV 84 (93)
T ss_dssp HHHHHHHTCHH-HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHcCCHH-HHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHH
Confidence 44444444444 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCC
Q 002053 645 ASLIALGAA 653 (974)
Q Consensus 645 ~lLL~~GAd 653 (974)
++|+++||+
T Consensus 85 ~~Ll~~ga~ 93 (93)
T 1n0q_A 85 KLLLEAGAY 93 (93)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHcCCC
Confidence 999999985
No 111
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.64 E-value=4e-16 Score=176.88 Aligned_cols=112 Identities=17% Similarity=0.173 Sum_probs=104.2
Q ss_pred ccCCCCcHHHHHHHc-CCHhHHHHHHhCCCcccccC--CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCC
Q 002053 591 LDHCGQGVLHFAAAL-GYDWALEPTTVAGVNINFRD--VNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSG 667 (974)
Q Consensus 591 ~D~~G~TpLH~Aa~~-G~~eiVklLL~~GAdvn~~D--~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~~~d~~~kD~~G 667 (974)
.+..+.|+||+|+.. |+.++++.||++|+++|..+ ..|+||||+||..|+.++|++||++|+++|. +|..|
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~------~d~~G 268 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQ------ADSAG 268 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTS
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC------CCCCC
Confidence 344577999999999 99999999999999999998 8999999999999999999999999999987 66899
Q ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHHhhh
Q 002053 668 RTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGA 713 (974)
Q Consensus 668 ~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~a~ 713 (974)
+||||+|+..|+.+++++|+++| ++++.+|..|.||+..|.
T Consensus 269 ~TpLh~A~~~g~~~~v~~LL~~G-----ad~~~~d~~G~TpL~~A~ 309 (368)
T 3jue_A 269 RGPLHHATILGHTGLACLFLKRG-----ADLGARDSEGRDPLTIAM 309 (368)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHH
T ss_pred CCHHHHHHHcCcHHHHHHHHHCc-----CCCCCcCCCCCCHHHHHH
Confidence 99999999999999999999988 999999999999998774
No 112
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.62 E-value=1.9e-15 Score=164.21 Aligned_cols=120 Identities=15% Similarity=0.083 Sum_probs=106.1
Q ss_pred CCcHHHHHHHcCCHhHHHHHHhCCCccc------ccCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCCCCC
Q 002053 595 GQGVLHFAAALGYDWALEPTTVAGVNIN------FRDVNGWTALHWAAYC---GRERTVASLIALGAAPGALSDPTPKYP 665 (974)
Q Consensus 595 G~TpLH~Aa~~G~~eiVklLL~~GAdvn------~~D~~G~TpLH~Aa~~---G~~eiV~lLL~~GAd~n~~~d~~~kD~ 665 (974)
..++||.|+..|+.+.+..|+..|++++ ..|..|+||||+||.. |+.++|++|+++|+++|. +|.
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~------~d~ 203 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDK------QTG 203 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTC------CCT
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccc------cCC
Confidence 4578999999999999999999999954 4588999999999999 899999999999999887 668
Q ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCcccCCCCCCHHHhhh-----hhhhcccccCCC
Q 002053 666 SGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGA-----TAVQTVPQRCPT 725 (974)
Q Consensus 666 ~G~TPLhlAa~~G~~eiv~lLLe~Gl~~h~adln~~d~~G~T~l~~a~-----~~~~~l~er~a~ 725 (974)
.|+||||+|+..|+.++|++|+++| ++++.+|..|.||+..|. ..++.+++.++.
T Consensus 204 ~g~TpLh~A~~~g~~~~v~~Ll~~g-----ad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 204 KGSTALHYCCLTDNAECLKLLLRGK-----ASIEIANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999999988 999999999999997775 344555555554
No 113
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.60 E-value=3.8e-16 Score=145.22 Aligned_cols=89 Identities=26% Similarity=0.202 Sum_probs=82.5
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 002053 577 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA 656 (974)
Q Consensus 577 lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~eiV~lLL~~GAd~n~ 656 (974)
+++.|++.|++++.+|..|.||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+++|.
T Consensus 24 ~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~ 103 (115)
T 2l6b_A 24 EVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNA 103 (115)
T ss_dssp HHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHH
T ss_pred HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCCCHH
Q 002053 657 LSDPTPKYPSGRTPA 671 (974)
Q Consensus 657 ~~d~~~kD~~G~TPL 671 (974)
++..|.||-
T Consensus 104 ------~~~~~~~~~ 112 (115)
T 2l6b_A 104 ------RSWGSSHHH 112 (115)
T ss_dssp ------HSCCCC---
T ss_pred ------CCccccccc
Confidence 457788773
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.46 E-value=2e-13 Score=126.70 Aligned_cols=84 Identities=23% Similarity=0.166 Sum_probs=75.2
Q ss_pred HHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHhCCCcccccCCCCCcHHHHHHHcCCHH
Q 002053 563 KLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRER 642 (974)
Q Consensus 563 ~lL~~a~~~~l~~~lvk~LL~~Gad~n~~D~~G~TpLH~Aa~~G~~eiVklLL~~GAdvn~~D~~G~TpLH~Aa~~G~~e 642 (974)
+.++.++..+..+ +++.|++.|+++|.+|..|.||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+.+
T Consensus 26 t~L~~A~~~g~~~-~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~ 104 (110)
T 2zgd_A 26 KKLLEAARAGQDD-EVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNED 104 (110)
T ss_dssp HHHHHHHHHTCHH-HHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred hHHHHHHHcCCHH-HHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHcCCHH
Confidence 3344444444444 789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 002053 643 TVASL 647 (974)
Q Consensus 643 iV~lL 647 (974)
++++|
T Consensus 105 ~~~~L 109 (110)
T 2zgd_A 105 LAEIL 109 (110)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99987
No 115
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=99.42 E-value=1.4e-13 Score=174.16 Aligned_cols=142 Identities=23% Similarity=0.278 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHhcCCCCCCchHHHhHHHHHhhcCCCC-----CChhHHHHHHHHHHHHhhHHHHHHHHH
Q 002053 750 QAAARIHQVFRVQSFQKKQLKEYGNDTFGISDERALSLVAVKTQKPGH-----HDEPVHAAATRIQNKFRSWKGRKDFLI 824 (974)
Q Consensus 750 qaAarIqqafR~~SfrrrqLl~~g~D~~g~~~e~a~sllA~k~~r~gq-----~~~~l~~AA~~IQk~~Rg~k~Rk~fl~ 824 (974)
.+|..||..+|.+..|++.... ..+.-.+ ++..|... .......||+.||+.||||+.|+.|..
T Consensus 769 ~aa~~IQa~~Rg~l~Rk~~~~~----------r~aai~I-Q~~~Rg~~aR~~~~~lr~~~AAi~IQs~~Rg~~~Rk~y~~ 837 (1080)
T 2dfs_A 769 AACIRIQKTIRGWLMRKKYMRM----------RRAAITI-QRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQC 837 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH----------HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhh----------HHHHHHH-HHHHHHHHHhhcccccccchhHHHHHHHHhhHHHHHHHHH
Confidence 5788899999999888775321 0111111 11001100 011245678888888888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHhccccccccccccccccccccCCCccchHHHHHHHHHH
Q 002053 825 IRKQIIKIQAYVRGHQVRKNYKKII--WSVGIMEKIILRWRRRGSGLRGFKSETLTASSSMVATSAKEDDYDFLKEGRKQ 902 (974)
Q Consensus 825 lr~aai~IQa~~Rg~~aRk~y~~~~--~a~~~~q~~~~~~~r~~~glRg~~~~~~~~~~~~~~~~~~~~~~~~l~~~rrq 902 (974)
+|.+++.||++|||+.+|++|++++ .|+.+||+.+|+|..| +
T Consensus 838 lr~aai~IQs~~Rg~laRr~~~~lr~~~aav~IQ~~~Rg~l~R------------------------------------~ 881 (1080)
T 2dfs_A 838 MRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLAR------------------------------------V 881 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHH------------------------------------H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------------H
Confidence 8888888888888888888886554 3677777776655433 2
Q ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHh
Q 002053 903 KEERLQKALARVKSMVQYPEARDQYRRLLNVVNEIQ 938 (974)
Q Consensus 903 ~~~r~~~A~~~iQs~~R~~~Ar~~yrrl~~~~~~~~ 938 (974)
.+.+.++|++.||++||++.||++|++|+.+++...
T Consensus 882 ~y~~~~~aai~iQs~~R~~laRr~~~~Lk~ear~~~ 917 (1080)
T 2dfs_A 882 HYHRTLKAIVYLQCCYRRMMAKRELKKLKIEARSVE 917 (1080)
T ss_dssp HTTTTHHHHHHHHHHHHHHHHHHHTTTC--------
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 234456899999999999999999999988876544
No 116
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=99.32 E-value=2.2e-12 Score=163.27 Aligned_cols=122 Identities=26% Similarity=0.335 Sum_probs=92.6
Q ss_pred ChhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhcc------ccc
Q 002053 799 DEPVHAAATRIQNKFRSWKGRKDFLIIRKQIIKIQAYVRGHQVRKNYK--KIIWSVGIMEKIILRWRRRGS------GLR 870 (974)
Q Consensus 799 ~~~l~~AA~~IQk~~Rg~k~Rk~fl~lr~aai~IQa~~Rg~~aRk~y~--~~~~a~~~~q~~~~~~~r~~~------glR 870 (974)
.+.+..+|+.||+.||||..|++|+++|.+++.||++|||+.+|++|+ +..+|+.+||+.+|+|..|+. .+.
T Consensus 764 ~~~l~~aa~~IQa~~Rg~l~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~~lr~~~AAi~IQs~~Rg~~~Rk~y~~lr~aai 843 (1080)
T 2dfs_A 764 ADKLRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATI 843 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 344678999999999999999999999999999999999999999874 457799999999999987752 111
Q ss_pred cccccccccccccccCCCccchHHHHHHHHHHH-HHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHh
Q 002053 871 GFKSETLTASSSMVATSAKEDDYDFLKEGRKQK-EERLQKALARVKSMVQYPEARDQYRRLLNVVNEIQ 938 (974)
Q Consensus 871 g~~~~~~~~~~~~~~~~~~~~~~~~l~~~rrq~-~~r~~~A~~~iQs~~R~~~Ar~~yrrl~~~~~~~~ 938 (974)
.+|+..| +++. |++. ..+..+|+++||++||++.+|+.|++++.++..+|
T Consensus 844 ~IQs~~R----------------g~la--Rr~~~~lr~~~aav~IQ~~~Rg~l~R~~y~~~~~aai~iQ 894 (1080)
T 2dfs_A 844 ALQALLR----------------GYLV--RNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVYLQ 894 (1080)
T ss_dssp HHHHHHH----------------HHHH--HHHHHHHHHHHHHHHHHHHHTTTHHHHHTTTTHHHHHHHH
T ss_pred HHHHHHH----------------HHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 1122111 2222 2221 22334689999999999999999998877666655
No 117
>2cxk_A Camta1, calmodulin binding transcription activator 1; structural genomics, TIG/IPT domain, NPPSFA; 1.85A {Homo sapiens} SCOP: b.1.18.1
Probab=99.15 E-value=1.4e-13 Score=126.36 Aligned_cols=87 Identities=37% Similarity=0.720 Sum_probs=78.2
Q ss_pred CceEeeeeccCCccCCCCceEEEecCCccccccccchhHHHhcCCchHHHHHHHCCCCcCCCCCCCCCChhHHHHHhcCC
Q 002053 388 QLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRL 467 (974)
Q Consensus 388 q~fsI~DfSP~wa~~~gg~KVLI~G~~l~~~~~~t~l~~Ac~fG~ieVV~~LL~~Ga~i~~~~~~~~G~TPLhvA~~ng~ 467 (974)
.++.|+||+|+|+|..||+||+|+|.++.... +|.|+||+.+++..+++.|+++|++|++..|.+||++.+.+..
T Consensus 5 ~~~~Itd~sP~~gp~sGGTkv~I~G~~L~~gs-----~~~~~fG~~~vpa~~~s~~vl~C~tPp~~~G~v~~~v~~d~~~ 79 (95)
T 2cxk_A 5 SSGMVTDYSPEWSYPEGGVKVLITGPWQEASN-----NYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQI 79 (95)
T ss_dssp CCSCCCEEECSEECTTCCCEEEEESSCCCCSS-----CEEEEETTEEEECEEEETTEEEEECCCCCSEEEEEEEEETTEE
T ss_pred CcEEEEEECCCcccCCCCEEEEEEeECCCCCc-----cEEEEECCEEEeEEEeECCEEEEEecCCCCceEeEEEEECCee
Confidence 46799999999999999999999999997643 6999999999999999999999999999999999999988665
Q ss_pred Cccchhhhhhhhc
Q 002053 468 SCSEVREFEYRAS 480 (974)
Q Consensus 468 ~~seVv~feyLl~ 480 (974)
+++.+.|+|..+
T Consensus 80 -~s~~~~FeY~~~ 91 (95)
T 2cxk_A 80 -ISNSVVFEYKSG 91 (95)
T ss_dssp -CSCCEEEEECCC
T ss_pred -cCCceEEEEeCC
Confidence 588888998743
No 118
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}
Probab=98.93 E-value=2e-09 Score=89.73 Aligned_cols=49 Identities=39% Similarity=0.613 Sum_probs=45.9
Q ss_pred hhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002053 800 EPVHAAATRIQNKFRSWKGRKDFLIIRKQIIKIQAYVRGHQVRKNYKKI 848 (974)
Q Consensus 800 ~~l~~AA~~IQk~~Rg~k~Rk~fl~lr~aai~IQa~~Rg~~aRk~y~~~ 848 (974)
+.+..+|+.||+.||||..|+.|+.++++++.||++|||+.+|+.|+.+
T Consensus 2 ~~~~~aai~IQ~~~Rg~~~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~~~ 50 (58)
T 2ix7_C 2 DKLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFL 50 (58)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4577899999999999999999999999999999999999999999754
No 119
>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}
Probab=98.66 E-value=3.3e-08 Score=79.13 Aligned_cols=43 Identities=28% Similarity=0.273 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHH
Q 002053 803 HAAATRIQNKFRSWKGRKDFLIIRK--QIIKIQAYVRGHQVRKNY 845 (974)
Q Consensus 803 ~~AA~~IQk~~Rg~k~Rk~fl~lr~--aai~IQa~~Rg~~aRk~y 845 (974)
..+++.||+.+|||..|+.|..+++ +|++||++||||.+|+.|
T Consensus 3 r~a~i~iQ~~~Rg~l~R~~~~~~~~~~aai~IQ~~~Rg~~~Rk~y 47 (48)
T 1n2d_C 3 SQAIKYLQNNIKGFIIRQRVNDEMKVNCATLLQAAYRGHSIRANV 47 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhh
Confidence 4689999999999999999999998 999999999999999987
No 120
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}
Probab=98.46 E-value=3.7e-07 Score=75.97 Aligned_cols=51 Identities=31% Similarity=0.350 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccccCCCccchHHHHHHHHHHH
Q 002053 824 IIRKQIIKIQAYVRGHQVRKNYKKIIWSVGIMEKIILRWRRRGSGLRGFKSETLTASSSMVATSAKEDDYDFLKEGRKQK 903 (974)
Q Consensus 824 ~lr~aai~IQa~~Rg~~aRk~y~~~~~a~~~~q~~~~~~~r~~~glRg~~~~~~~~~~~~~~~~~~~~~~~~l~~~rrq~ 903 (974)
++..+++.||++||||.+|+.|+++
T Consensus 3 ~~~~aai~IQ~~~Rg~~~Rk~~~~~------------------------------------------------------- 27 (58)
T 2ix7_C 3 KLRAACIRIQKTIRGWLLRKRYLCM------------------------------------------------------- 27 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-------------------------------------------------------
Confidence 3567899999999999999999733
Q ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 002053 904 EERLQKALARVKSMVQYPEARDQYRRLLNV 933 (974)
Q Consensus 904 ~~r~~~A~~~iQs~~R~~~Ar~~yrrl~~~ 933 (974)
++|++.||++|||+.||+.|+.|+..
T Consensus 28 ----r~aai~IQ~~~Rg~~aR~~~~~~r~~ 53 (58)
T 2ix7_C 28 ----QRAAITVQRYVRGYQARCYAKFLRRT 53 (58)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 25788888999999999998888654
No 121
>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}
Probab=98.32 E-value=6.7e-07 Score=71.45 Aligned_cols=22 Identities=23% Similarity=0.431 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 002053 825 IRKQIIKIQAYVRGHQVRKNYK 846 (974)
Q Consensus 825 lr~aai~IQa~~Rg~~aRk~y~ 846 (974)
+|++++.||++|||+.+|+.|.
T Consensus 2 ~r~a~i~iQ~~~Rg~l~R~~~~ 23 (48)
T 1n2d_C 2 ISQAIKYLQNNIKGFIIRQRVN 23 (48)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999999999999997
No 122
>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A
Probab=97.35 E-value=0.00045 Score=58.48 Aligned_cols=48 Identities=25% Similarity=0.335 Sum_probs=43.1
Q ss_pred CChhHHHHHHHHHHHHhhHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
Q 002053 798 HDEPVHAAATRIQNKFRSWKGRKDFLII---RKQIIKIQAYVRGHQVRKNY 845 (974)
Q Consensus 798 ~~~~l~~AA~~IQk~~Rg~k~Rk~fl~l---r~aai~IQa~~Rg~~aRk~y 845 (974)
+++.+...++.||+..|||..|++|.++ +.++..||.++|+|..++.+
T Consensus 1 Rd~~l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~~w 51 (64)
T 1wdc_A 1 RDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW 51 (64)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 3677888999999999999999999999 78888999999999999865
No 123
>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=97.06 E-value=0.00076 Score=56.89 Aligned_cols=45 Identities=24% Similarity=0.273 Sum_probs=38.5
Q ss_pred hHHHHHHHHHHHHhhHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
Q 002053 801 PVHAAATRIQNKFRSWKGRKDFLII---RKQIIKIQAYVRGHQVRKNY 845 (974)
Q Consensus 801 ~l~~AA~~IQk~~Rg~k~Rk~fl~l---r~aai~IQa~~Rg~~aRk~y 845 (974)
.+...++.||+..|||..|++|.++ +.++..||.++|+|..++..
T Consensus 2 ~l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr~w 49 (63)
T 2bl0_A 2 RIGEIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFKNW 49 (63)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 3566788999999999999999998 77788999999999998854
No 124
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=97.06 E-value=0.0004 Score=85.99 Aligned_cols=48 Identities=25% Similarity=0.341 Sum_probs=43.1
Q ss_pred ChhHHHHHHHHHHHHhhHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH
Q 002053 799 DEPVHAAATRIQNKFRSWKGRKDFLII---RKQIIKIQAYVRGHQVRKNYK 846 (974)
Q Consensus 799 ~~~l~~AA~~IQk~~Rg~k~Rk~fl~l---r~aai~IQa~~Rg~~aRk~y~ 846 (974)
++.+..+++.||+.+|||..||+|+++ |.+++.||++||||.+||+|.
T Consensus 775 ~~~l~~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~~~ 825 (837)
T 1kk8_A 775 DERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQ 825 (837)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchH
Confidence 455777899999999999999999998 788999999999999999875
No 125
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=96.89 E-value=0.0024 Score=82.51 Aligned_cols=46 Identities=22% Similarity=0.262 Sum_probs=39.6
Q ss_pred hHHHHHHHHHHHHhhHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
Q 002053 801 PVHAAATRIQNKFRSWKGRKDFLIIR---KQIIKIQAYVRGHQVRKNYK 846 (974)
Q Consensus 801 ~l~~AA~~IQk~~Rg~k~Rk~fl~lr---~aai~IQa~~Rg~~aRk~y~ 846 (974)
.+..+++.||+.+|||..|++|.+++ .+++.||++||+|.+||.|.
T Consensus 790 ~l~~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~~~ 838 (1184)
T 1i84_S 790 KITDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXHWP 838 (1184)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 35567899999999999999999874 67899999999999998764
No 126
>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=96.70 E-value=0.0027 Score=53.51 Aligned_cols=43 Identities=23% Similarity=0.250 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhc
Q 002053 824 IIRKQIIKIQAYVRGHQVRKNYKKI---IWSVGIMEKIILRWRRRG 866 (974)
Q Consensus 824 ~lr~aai~IQa~~Rg~~aRk~y~~~---~~a~~~~q~~~~~~~r~~ 866 (974)
++...++.+|+++||+.+|+.|+++ ..|+.+||+.++.|-..+
T Consensus 2 ~l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr 47 (63)
T 2bl0_A 2 RIGEIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFK 47 (63)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3567789999999999999999888 789999999999887653
No 127
>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A
Probab=96.68 E-value=0.0033 Score=53.06 Aligned_cols=42 Identities=31% Similarity=0.496 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHh
Q 002053 824 IIRKQIIKIQAYVRGHQVRKNYKKI---IWSVGIMEKIILRWRRR 865 (974)
Q Consensus 824 ~lr~aai~IQa~~Rg~~aRk~y~~~---~~a~~~~q~~~~~~~r~ 865 (974)
++...++.+|+++||+.+|+.|+++ ..|+.+||+.++.|-..
T Consensus 4 ~l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l 48 (64)
T 1wdc_A 4 RLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVL 48 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4567899999999999999999888 77899999999888665
No 128
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=96.49 E-value=0.0039 Score=77.21 Aligned_cols=56 Identities=23% Similarity=0.223 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccccCCCccchHHHHHHHHH
Q 002053 822 FLIIRKQIIKIQAYVRGHQVRKNYKKIIWSVGIMEKIILRWRRRGSGLRGFKSETLTASSSMVATSAKEDDYDFLKEGRK 901 (974)
Q Consensus 822 fl~lr~aai~IQa~~Rg~~aRk~y~~~~~a~~~~q~~~~~~~r~~~glRg~~~~~~~~~~~~~~~~~~~~~~~~l~~~rr 901 (974)
-.++.+.++.||++||||.+||+|+++ ++
T Consensus 775 ~~~l~~~~~~iQa~~Rg~l~R~~~~k~---------------------------------------------------~~ 803 (837)
T 1kk8_A 775 DERLSKIISMFQAHIRGYLIRKAYKKL---------------------------------------------------QD 803 (837)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------------------------------------HH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHH---------------------------------------------------HH
Confidence 345667899999999999999999743 11
Q ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 002053 902 QKEERLQKALARVKSMVQYPEARDQYRRLLNV 933 (974)
Q Consensus 902 q~~~r~~~A~~~iQs~~R~~~Ar~~yrrl~~~ 933 (974)
+ +.|++.||+.||++++|+.|..++.-
T Consensus 804 ~-----r~a~~~IQ~~~R~~~~~r~~~w~~l~ 830 (837)
T 1kk8_A 804 Q-----RIGLSVIQRNIRKWLVLRNWQWWKLY 830 (837)
T ss_dssp H-----HHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred H-----HHHHHHHHHHHHHHHHHcchHHHHHH
Confidence 1 25788899999999999888777543
No 129
>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}
Probab=95.59 E-value=0.2 Score=49.10 Aligned_cols=33 Identities=18% Similarity=0.147 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002053 826 RKQIIKIQAYVRGHQVRKNYKKIIWSVGIMEKI 858 (974)
Q Consensus 826 r~aai~IQa~~Rg~~aRk~y~~~~~a~~~~q~~ 858 (974)
+.++++||+.+|||.+||+|+.+..+...+..+
T Consensus 45 ~~~~i~iQktvR~~L~rkkhkPRi~g~~kv~~L 77 (148)
T 3gn4_A 45 AEACIKMQKTIRMWLCKRRHKPRIDGLVKVGTL 77 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 566899999999999999999887776554443
No 130
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=94.81 E-value=0.043 Score=70.89 Aligned_cols=46 Identities=26% Similarity=0.182 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhc
Q 002053 821 DFLIIRKQIIKIQAYVRGHQVRKNYKKII---WSVGIMEKIILRWRRRG 866 (974)
Q Consensus 821 ~fl~lr~aai~IQa~~Rg~~aRk~y~~~~---~a~~~~q~~~~~~~r~~ 866 (974)
+-..+...++.||++||||.+|++|++++ .|+.+||+.+|+|..++
T Consensus 787 r~~~l~~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k 835 (1184)
T 1i84_S 787 RDLKITDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVX 835 (1184)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33456678999999999999999998764 68999999999998775
No 131
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=94.00 E-value=0.065 Score=67.86 Aligned_cols=47 Identities=6% Similarity=0.048 Sum_probs=38.8
Q ss_pred ChhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002053 799 DEPVHAAATRIQNKFRSWKGRKDFLIIRKQIIKIQAYVRGHQVRKNYK 846 (974)
Q Consensus 799 ~~~l~~AA~~IQk~~Rg~k~Rk~fl~lr~aai~IQa~~Rg~~aRk~y~ 846 (974)
.+.+..+++.|| ++|||..|++|+++|++++.||..+|+...|+.+.
T Consensus 771 ~~~~~~~~~~iq-~~r~~l~r~~~~k~~~~a~~i~~~~r~~~~r~~~~ 817 (1052)
T 4anj_A 771 KSDPDHLAELVK-RVNHWLICSRWKKVQWCSLSVIKLKNKIKYRAEAV 817 (1052)
T ss_dssp CCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 334666777777 57999999999999999999999999988776654
No 132
>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}
Probab=87.23 E-value=2.5 Score=41.36 Aligned_cols=26 Identities=4% Similarity=0.111 Sum_probs=21.3
Q ss_pred HHHHHHHHhhccHHHHHHHHHHHHHH
Q 002053 909 KALARVKSMVQYPEARDQYRRLLNVV 934 (974)
Q Consensus 909 ~A~~~iQs~~R~~~Ar~~yrrl~~~~ 934 (974)
+|+++||+.+|+++||+.|+--....
T Consensus 46 ~~~i~iQktvR~~L~rkkhkPRi~g~ 71 (148)
T 3gn4_A 46 EACIKMQKTIRMWLCKRRHKPRIDGL 71 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 57999999999999999998664333
No 133
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=86.60 E-value=0.52 Score=58.13 Aligned_cols=30 Identities=30% Similarity=0.426 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002053 823 LIIRKQIIKIQAYVRGHQVRKNYKKIIWSV 852 (974)
Q Consensus 823 l~lr~aai~IQa~~Rg~~aRk~y~~~~~a~ 852 (974)
.++.++++.||++||||.+||+|++++.|+
T Consensus 765 ~~l~~~~~~iQ~~~Rg~l~R~~~~~~r~a~ 794 (795)
T 1w7j_A 765 DKLRAACIRIQKTIRGWLMRKKYMRMRRGD 794 (795)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 356678999999999999999999887664
No 134
>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}
Probab=82.01 E-value=1.1 Score=32.41 Aligned_cols=19 Identities=26% Similarity=0.298 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHhhHHHHHH
Q 002053 803 HAAATRIQNKFRSWKGRKD 821 (974)
Q Consensus 803 ~~AA~~IQk~~Rg~k~Rk~ 821 (974)
+.+|+.||+.||+|+.|+.
T Consensus 6 e~aA~vIQrA~R~yl~rr~ 24 (31)
T 2l53_B 6 EVSAMVIQRAFRRHLLQRS 24 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 4566777777777766654
No 135
>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}
Probab=80.55 E-value=1.1 Score=31.32 Aligned_cols=17 Identities=24% Similarity=0.352 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHhhHHHH
Q 002053 803 HAAATRIQNKFRSWKGR 819 (974)
Q Consensus 803 ~~AA~~IQk~~Rg~k~R 819 (974)
+.+|+.||+.||+|+.|
T Consensus 6 e~aA~vIQrA~R~yl~~ 22 (27)
T 2kxw_B 6 EVSAIVIQRAYRRYLLK 22 (27)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34555666666665554
No 136
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=80.53 E-value=0.65 Score=57.30 Aligned_cols=31 Identities=32% Similarity=0.591 Sum_probs=26.0
Q ss_pred ChhHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 002053 799 DEPVHAAATRIQNKFRSWKGRKDFLIIRKQI 829 (974)
Q Consensus 799 ~~~l~~AA~~IQk~~Rg~k~Rk~fl~lr~aa 829 (974)
.+.+..+++.||+.+|||..||+|+++|+++
T Consensus 764 ~~~l~~~~~~iQ~~~Rg~l~R~~~~~~r~a~ 794 (795)
T 1w7j_A 764 ADKLRAACIRIQKTIRGWLMRKKYMRMRRGD 794 (795)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4456778999999999999999999999875
No 137
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=80.11 E-value=1.5 Score=55.72 Aligned_cols=36 Identities=14% Similarity=0.148 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002053 825 IRKQIIKIQAYVRGHQVRKNYKKIIWSVGIMEKIILR 861 (974)
Q Consensus 825 lr~aai~IQa~~Rg~~aRk~y~~~~~a~~~~q~~~~~ 861 (974)
+.+.++.|| .+||+.+|++|+++++++..++++.++
T Consensus 774 ~~~~~~~iq-~~r~~l~r~~~~k~~~~a~~i~~~~r~ 809 (1052)
T 4anj_A 774 PDHLAELVK-RVNHWLICSRWKKVQWCSLSVIKLKNK 809 (1052)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566555 589999999999999999888886543
No 138
>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}
Probab=79.28 E-value=1.2 Score=32.17 Aligned_cols=19 Identities=21% Similarity=0.308 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 002053 827 KQIIKIQAYVRGHQVRKNY 845 (974)
Q Consensus 827 ~aai~IQa~~Rg~~aRk~y 845 (974)
.+|+.||..||+|..|+..
T Consensus 7 ~aA~vIQrA~R~yl~rr~~ 25 (31)
T 2l53_B 7 VSAMVIQRAFRRHLLQRSL 25 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 4789999999999998753
No 139
>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}
Probab=77.67 E-value=1.2 Score=31.25 Aligned_cols=18 Identities=22% Similarity=0.178 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 002053 827 KQIIKIQAYVRGHQVRKN 844 (974)
Q Consensus 827 ~aai~IQa~~Rg~~aRk~ 844 (974)
.+|+.||..||+|..|+.
T Consensus 7 ~aA~vIQrA~R~yl~~~~ 24 (27)
T 2kxw_B 7 VSAIVIQRAYRRYLLKQK 24 (27)
T ss_dssp HHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 578999999999998753
No 140
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=74.86 E-value=2.1 Score=54.28 Aligned_cols=44 Identities=14% Similarity=0.118 Sum_probs=32.6
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002053 806 ATRIQNKFRSWKGRKDFLIIRKQIIKIQAYVRGHQVRKNYKKII 849 (974)
Q Consensus 806 A~~IQk~~Rg~k~Rk~fl~lr~aai~IQa~~Rg~~aRk~y~~~~ 849 (974)
+..+++++|+...+.+++.++++++.||+.||+++.++++.+..
T Consensus 767 a~~Ll~WIr~k~a~l~~r~~~~sl~~IQ~~ir~f~~fr~~ekpp 810 (995)
T 2ycu_A 767 ANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPP 810 (995)
T ss_dssp HHHHHHHTTTTTCCCSCHHHHHHHHHHHHHHHHHTTHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhccc
Confidence 44556666766666777788888888888888888888776543
No 141
>3muj_A Transcription factor COE3; immunoglobulin like fold, helix-loop-helix, structural genom consortium, SGC, DNA binding protein; 1.92A {Homo sapiens} PDB: 3mqi_A
Probab=54.29 E-value=0.58 Score=45.05 Aligned_cols=62 Identities=23% Similarity=0.354 Sum_probs=51.2
Q ss_pred eEeeeeccCCccCCCCceEEEecCCccccccccchhHHHhcCCchHHHHHHHCCCCcCCCCC-CCCCChh
Q 002053 390 YSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSS-QKVGRVP 458 (974)
Q Consensus 390 fsI~DfSP~wa~~~gg~KVLI~G~~l~~~~~~t~l~~Ac~fG~ieVV~~LL~~Ga~i~~~~~-~~~G~TP 458 (974)
..|.-++|.-+...||+.|.|.|..+.+. .-|.||...+--.++...+++|.+|+ +..|.+.
T Consensus 6 P~I~~i~P~eG~~~GG~~V~I~G~nF~~G-------lqV~FG~t~~w~e~itphairv~~PP~~~pG~V~ 68 (138)
T 3muj_A 6 PCIKAISPSEGWTTGGATVIIIGDNFFDG-------LQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVE 68 (138)
T ss_dssp CEEEEEESSEEETTCCCEEEEEEESCCTT-------CEEEETTEEECEEEEETTEEEEECCCCSSCEEEE
T ss_pred CceeEecCCCCCccCCeEEEEeCCCcccC-------CEEEECCeeeeeeeecccceEEECCCCCCCCceE
Confidence 47999999999999999999999888766 45889998877778888899999887 4446543
No 142
>2uzx_B Hepatocyte growth factor receptor; signaling protein/receptor, leucine rich repeat, receptor ectodomain, signaling protein, ATP-binding; 2.8A {Homo sapiens} PDB: 2uzy_B 1shy_B 1ssl_A
Probab=36.83 E-value=7.3 Score=47.67 Aligned_cols=72 Identities=18% Similarity=0.238 Sum_probs=0.9
Q ss_pred ceEeeeeccCCccCCCCceEEEecCCccccccccchhHHHhcCCchHHHHHHHCCCCcCCCCCC-CCCChhHHHHHhc
Q 002053 389 LYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQ-KVGRVPFYVTCSN 465 (974)
Q Consensus 389 ~fsI~DfSP~wa~~~gg~KVLI~G~~l~~~~~~t~l~~Ac~fG~ieVV~~LL~~Ga~i~~~~~~-~~G~TPLhvA~~n 465 (974)
...|+.++|.++...||+.|.|.|..+.... ...+.+|..+..-..+....+.|..|+. ..|..|+.+...+
T Consensus 635 ~P~I~sisP~~G~~sGGt~ITI~G~nf~~~~-----~~~V~ig~~~C~i~~~s~t~I~C~tP~~~~~g~~~V~V~idg 707 (727)
T 2uzx_B 635 DPVITSISPKYGPMAGGTLLTLTGNYLNSGN-----SRHISIGGKTCTLKSVSNSILECYTPAQTISTEFAVKLKIDL 707 (727)
T ss_dssp CC----------------------------------------------------------------------------
T ss_pred cceeEEECCCccccCCCEEEEEEEECCCCCC-----ceEEEECCEEeeEEeecCCEEEEEcCCCCCCceEEEEEEECC
Confidence 4579999999999999999999999987643 2566777766543445555667776663 3455566655543
No 143
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A
Probab=35.40 E-value=25 Score=35.11 Aligned_cols=18 Identities=28% Similarity=0.307 Sum_probs=9.5
Q ss_pred HHHHHHHHHHhhHHHHHH
Q 002053 804 AAATRIQNKFRSWKGRKD 821 (974)
Q Consensus 804 ~AA~~IQk~~Rg~k~Rk~ 821 (974)
.||..||+.||.|+.|+.
T Consensus 131 ~aA~~IQra~R~~~~r~~ 148 (168)
T 4dck_A 131 VSAMVIQRAFRRHLLQRS 148 (168)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 355555555555554443
No 144
>3mlp_A Transcription factor COE1; transcription factor, pseudo-IG-fold, TIG-domain, IPT-domain loop-helix; HET: DNA CIT; 2.80A {Mus musculus} PDB: 3n50_A
Probab=31.49 E-value=3.2 Score=45.61 Aligned_cols=63 Identities=22% Similarity=0.346 Sum_probs=52.4
Q ss_pred ceEeeeeccCCccCCCCceEEEecCCccccccccchhHHHhcCCchHHHHHHHCCCCcCCCCC-CCCCChh
Q 002053 389 LYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSS-QKVGRVP 458 (974)
Q Consensus 389 ~fsI~DfSP~wa~~~gg~KVLI~G~~l~~~~~~t~l~~Ac~fG~ieVV~~LL~~Ga~i~~~~~-~~~G~TP 458 (974)
...|.-++|.-+...||+.|.|.|..+.+. .-+.||...+-..++...+++|.+|+ +..|.+.
T Consensus 231 tP~IkaIsPnEG~~tGG~tV~IiGenFf~G-------LQVvFGtt~vWselITphAIRV~tPPr~~PGvVd 294 (402)
T 3mlp_A 231 TPCIKAISPSEGWTTGGATVIIIGDNFFDG-------LQVIFGTMLVWSELITPHAIRVQTPPRHIPGVVE 294 (402)
T ss_dssp CCEEEECSSCEECTTCCCEEEEEEECCCTT-------CEEEETTEEECEEEEETTEEEEECCCCSSCEEEE
T ss_pred CcceEEecCCCCCccCCeEEEEeCCCcccC-------CEEEEccEeeeeEEecccceEEECCCCCCCCceE
Confidence 458999999999999999999999888776 45789988887888889999999887 4446543
No 145
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A
Probab=29.65 E-value=33 Score=34.22 Aligned_cols=21 Identities=24% Similarity=0.339 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 002053 827 KQIIKIQAYVRGHQVRKNYKK 847 (974)
Q Consensus 827 ~aai~IQa~~Rg~~aRk~y~~ 847 (974)
.||+.||.+||.|..|+.+++
T Consensus 131 ~aA~~IQra~R~~~~r~~~~~ 151 (168)
T 4dck_A 131 VSAMVIQRAFRRHLLQRSLKH 151 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccccc
Confidence 468999999999999988863
No 146
>2f3y_B Voltage-dependent L-type calcium channel alpha- 1C subunit; calmodulin, calmodulin complex, calcium channnel, CAV1.2, IQ domain; 1.45A {Homo sapiens} PDB: 2f3z_B 2vay_B
Probab=23.12 E-value=49 Score=22.72 Aligned_cols=17 Identities=41% Similarity=0.534 Sum_probs=12.5
Q ss_pred HHHHHHHHhhHHHHHHH
Q 002053 806 ATRIQNKFRSWKGRKDF 822 (974)
Q Consensus 806 A~~IQk~~Rg~k~Rk~f 822 (974)
-..||..||.|+.|++-
T Consensus 5 t~LIqdyfRkfkkrke~ 21 (26)
T 2f3y_B 5 TFLIQEYFRKFKKRKEQ 21 (26)
T ss_pred hhhHHHHHHHHHHhHHh
Confidence 44688888888887663
No 147
>3dvk_B Voltage-dependent R-type calcium channel subunit; calmodulin, IQ domain, inactivation, facili calcium-dependent, voltage-gated; 2.30A {Rattus norvegicus} PDB: 3dvm_B
Probab=22.34 E-value=35 Score=23.01 Aligned_cols=17 Identities=29% Similarity=0.274 Sum_probs=12.7
Q ss_pred HHHHHHHHHHhhHHHHH...
Q 002053 804 AAATRIQNKFRSWKGRK... 820 (974)
Q Consensus 804 ~AA~~IQk~~Rg~k~Rk... 820 (974)
-|+..||..||.++.|+
T Consensus 7 YA~llI~d~~r~~k~r~... 23 (23)
T 3dvk_B 7 YAAMMIMDYYKQSKVKKxxx 26 (26)
T ss_dssp HHHHHHHHHHHHHHHTC...
T ss_pred HHHHHHHHHHHHHhccC...
Confidence 36778888888887663
Done!