BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002057
(974 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|F4K4R6|GEX2_ARATH Protein GAMETE EXPRESSED 2 OS=Arabidopsis thaliana GN=GEX2 PE=2
SV=1
Length = 914
Score = 1083 bits (2800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/917 (58%), Positives = 674/917 (73%), Gaps = 34/917 (3%)
Query: 28 IGLFNVIIKDDLFEVLDSSLHFKVEPGRLNPSVCVASWMGLINEFEAGNKDRIMILPKDA 87
+G+FN++I ++ F+VLDSSLHF+VE G + PSV V SWMGL N FEAG I+ILPKDA
Sbjct: 2 VGIFNIVIDEENFKVLDSSLHFEVEAGLMYPSVSVVSWMGLANVFEAGMNASILILPKDA 61
Query: 88 FGNNVTSTSEELSSFNFTVSALYANGS-ALTPNITNMGLNEVGYIIIEFILMKAGNFSLH 146
FGNN++ + +++ F++S + NGS A N T++ GYI I+F+L+ +G F L
Sbjct: 62 FGNNISFSGKKMEFQEFSLSLISENGSFAGVLNSTHIRWIVSGYISIDFVLVTSGKFLLL 121
Query: 147 VEAGNQTLNGSPLPFKVNPGPVDVSNCVAKWKYEVAAWQIFSKMEIFIHQLDQYGNLVPG 206
VE +QTLNG PLP +VN GP+DVSNCV+ WK E++ WQIFSKMEI +HQ D++GN+V G
Sbjct: 122 VEKESQTLNGGPLPLEVNSGPLDVSNCVSIWKSELSTWQIFSKMEILLHQKDRFGNIVSG 181
Query: 207 FYAFDADVVEKETNLSIPVADLQFEEVAPGVQLFSYTIEESGNFLLTISDEKHNKSVSNM 266
FY FDADVVE ET LSIPVAD QFE V PG+QL S+T+ E GNFLLT+SD KHNKS+S+M
Sbjct: 182 FYEFDADVVEVETGLSIPVADFQFEYVEPGIQLMSFTLSEPGNFLLTLSDMKHNKSISSM 241
Query: 267 PYTYTVFVGYCNGSSSVVNGSGLNDSVAGETAHFSVYLNDMFQYPYPVEVERLQVQIARE 326
PY YTV++GYC+GS S+VNGSG+N S+AGE+ FSVYL D + YP PV+V+RLQV+I E
Sbjct: 242 PYVYTVYIGYCDGSRSIVNGSGINASIAGESLGFSVYLKDAYGYPSPVQVDRLQVRIVLE 301
Query: 327 VDSSTVWPSISPTQIYN-------------------------VQASAFDVTYTPEKSGIY 361
+DSS + P+I P + N QAS FDVTYTP+++GIY
Sbjct: 302 IDSSIILPTIQPREALNGTGSSHQAATPLYEKHGGRASGNLVTQASIFDVTYTPKRTGIY 361
Query: 362 KILVLCANIVLNGGHSFTKEVTASDVNMTLSGVVKFTPKVAKLITHEIVVQLLDSYSNPV 421
+I + NIVLNGG F KEV A +VN+ V +F KV K I +EIVV LLD + NPV
Sbjct: 362 RIFISSGNIVLNGGQPFIKEVYAGEVNVAACSVTQFNGKVPKEIKNEIVVLLLDGFYNPV 421
Query: 422 LSQQSGLKLEITSMNSSGFSSWMFVDNNDGSYSGHYLAMDVGTYEMCVSYDGTNFSLCPF 481
SQ S LK EITS N+S F++W FVDNNDG+Y+G YLAM+VGTY MC+S+D + CPF
Sbjct: 422 PSQPSRLKFEITSANTSSFTTWEFVDNNDGTYTGSYLAMEVGTYRMCISFDNKHIQPCPF 481
Query: 482 LVNVYSSQYFPKAYDDKVSVWEDESIALDALANDYFAGNNASIIEFSKPVRGSLLQYGRI 541
VNVYS+ YFP+AYDD V+VWEDESI+ + L NDYFAG+NAS++ FS+P GSLL+ G +
Sbjct: 482 DVNVYSNGYFPRAYDDPVNVWEDESISFNPLENDYFAGDNASMLGFSQPGHGSLLRDGNL 541
Query: 542 FRYTPFKDYIGNDSFSYTIADVNGNLATAAVNISVLSIPPQFVSFPSQLQATEDMISPRF 601
RYTP K++ GNDSF YTIAD+NGNLA A V I VL+ PPQFVSF LQATED+ISPR+
Sbjct: 542 LRYTPMKNFSGNDSFLYTIADINGNLAAATVYIFVLTAPPQFVSFSGGLQATEDLISPRY 601
Query: 602 GGFLGFEIRYSDMLENISVSLSARSGTVLLSSMMMQFWQPMSSGLSVRIGDGYQKELIIE 661
GGF G EI YSD+LENISV + A SG+V+LS M+MQF P S LSV G ++ LI+E
Sbjct: 602 GGFSGLEISYSDLLENISVMVQALSGSVILSPMLMQFRPPGSGKLSVSNGGEDRRVLILE 661
Query: 662 GSVEIISMALQSIQYLGNENFYGEDTIRVSARNKNGKNDLAVPVFVDPVNDPPFIQVPKY 721
G V +I+ ALQSIQYLGNENF G D++R+S +NKNG N L VPVFV+PVNDPPFI VP+Y
Sbjct: 662 GQVGVINPALQSIQYLGNENFAGVDSLRLSTKNKNGINHLDVPVFVEPVNDPPFINVPQY 721
Query: 722 IVLKSDADESQIFDRETNKFNVSIGDPDAFNYPGGTSRFLVTFSMEVNDGLLVTSLPAEL 781
I+L+S+ ES IF E +KFN S+GDPD N+PGG S FLVTFS+EV DG L+T+LP+EL
Sbjct: 722 IMLESNGSESLIFHPERDKFNFSVGDPDLVNFPGGESHFLVTFSLEVTDGFLLTNLPSEL 781
Query: 782 INSTELKLKTSFQWEPLQTYVTISKHFTVKASGVRFRGTVNDCNSIMQQLFYQSGEGDDV 841
INSTELK K FQW+P+QTY ISKH VKASG+RFRGT+ CN +MQQL ++ GE V
Sbjct: 782 INSTELKFKNLFQWQPIQTYAAISKHVNVKASGIRFRGTIRQCNDLMQQLLHRGGENGAV 841
Query: 842 LKVKLNDMGHYGCRPDCTEKISLPLFAEATVNLIRRRPMSSVLAHTLGAGVVIEFFMVFF 901
L +KL+DMG+YGC DCTE+ISLPL AEA VNLIR+RP+SS+ AH FM +
Sbjct: 842 LTLKLSDMGNYGCFLDCTERISLPLHAEARVNLIRKRPLSSLGAHGT--------FMKYL 893
Query: 902 LGVLLLFFTCKCAFLLV 918
+ V FF+ K LL+
Sbjct: 894 VVVPFSFFSIKLFSLLM 910
>sp|Q14315|FLNC_HUMAN Filamin-C OS=Homo sapiens GN=FLNC PE=1 SV=3
Length = 2725
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 105/266 (39%), Gaps = 32/266 (12%)
Query: 226 ADLQFEEVAPGVQLFSYTIEESGNFLLTIS-DEKHNKSVSNMPYTYTVFVGYCNGSSSVV 284
A ++ ++ G SY E G + + I E H + P+ T+ + + S
Sbjct: 1105 AKIECQDNGDGSCAVSYLPTEPGEYTINILFAEAH---IPGSPFKATIRPVF-DPSKVRA 1160
Query: 285 NGSGLNDSVAGETAHFSVYLNDMFQYPYPVEVERLQVQIAREVDSSTVWPSISPTQIYNV 344
+G GL GE A F+V ++ + +E+ + EV I+N
Sbjct: 1161 SGPGLERGKVGEAATFTVDCSEAGEAELTIEI-LSDAGVKAEV------------LIHNN 1207
Query: 345 QASAFDVTYTPEKSGIYKILVLCANIVLNGGHSFTKEVTASDVNMTL--SGVVKFTPKVA 402
+ +TY+P G Y I + GGH K T V + SGV P V
Sbjct: 1208 ADGTYHITYSPAFPGTYTI------TIKYGGHPVPKFPTRVHVQPAVDTSGVKVSGPGVE 1261
Query: 403 KL-ITHEIVVQL-LDSYSNPVLSQQSGLKLEITSMNSSGFSSWMFV-DNNDGSYSGHYLA 459
+ E+ + +D+ S L+ G + +N SG + +V DN DG+Y Y A
Sbjct: 1262 PHGVLREVTTEFTVDARS---LTATGGNHVTARVLNPSGAKTDTYVTDNGDGTYRVQYTA 1318
Query: 460 MDVGTYEMCVSYDGTNFSLCPFLVNV 485
+ G + + V YD PF V V
Sbjct: 1319 YEEGVHLVEVLYDEVAVPKSPFRVGV 1344
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 40/202 (19%)
Query: 349 FDVTYTPEKSGIYKILVLCAN---------IVLNGGHSFTKEVTASDVNMTLSGVVKFTP 399
F V YTP +G Y I+VL AN I ++ H +K V A + +GV P
Sbjct: 829 FTVKYTPPGAGRYTIMVLFANQEIPASPFHIKVDPSHDASK-VKAEGPGLNRTGVEVGKP 887
Query: 400 KVAKLITHEIVVQLLDSYSNPVLSQQSG-LKLEIT---SMNSSGFSSWMFVDNNDGSYSG 455
TH V L++ +G KL++ + + +DN+D SY+
Sbjct: 888 ------THFTV-----------LTKGAGKAKLDVQFAGTAKGEVVRDFEIIDNHDYSYTV 930
Query: 456 HYLAMDVGTYEMCVSYDGTNFSLCPFLVNVYS----SQYFPKAYDDKVSVWEDESIALDA 511
Y A+ G + V+Y G PF+VNV S+ + + KV+V ++++ ++
Sbjct: 931 KYTAVQQGNMAVTVTYGGDPVPKSPFVVNVAPPLDLSKIKVQGLNSKVAVGQEQAFSV-- 988
Query: 512 LANDYFAGNNASI-IEFSKPVR 532
N AG + + + P R
Sbjct: 989 --NTRGAGGQGQLDVRMTSPSR 1008
Score = 37.0 bits (84), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 61/161 (37%), Gaps = 35/161 (21%)
Query: 338 PTQIYNVQASAFDVTYTPEKSGIYKILVLCAN---------IVLNGGHSFTKEVTASDVN 388
P ++ + V YTP G Y + V A+ I + H +K V AS
Sbjct: 1490 PVEVRDNGDGTHTVHYTPATDGPYTVAVKYADQEVPRSPFKIKVLPAHDASK-VRASGPG 1548
Query: 389 MTLSGV-----VKFTPKVAKLITHEIVVQLLDSYSNPVLSQQSGLKLEITSMNSSGFSSW 443
+ SG+ V+FT + VQ+LD P +++ ++
Sbjct: 1549 LNASGIPASLPVEFTIDARDAGEGLLTVQILDPEGKP---KKANIR-------------- 1591
Query: 444 MFVDNNDGSYSGHYLAMDVGTYEMCVSYDGTNFSLCPFLVN 484
DN DG+Y+ YL G Y + + Y G PF ++
Sbjct: 1592 ---DNGDGTYTVSYLPDMSGRYTITIKYGGDEIPYSPFRIH 1629
>sp|Q8VHX6|FLNC_MOUSE Filamin-C OS=Mus musculus GN=Flnc PE=1 SV=3
Length = 2726
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 105/266 (39%), Gaps = 32/266 (12%)
Query: 226 ADLQFEEVAPGVQLFSYTIEESGNFLLTIS-DEKHNKSVSNMPYTYTVFVGYCNGSSSVV 284
A ++ ++ G SY E G + + I E H + P+ T+ + + S
Sbjct: 1106 AKIECQDNGDGSCAVSYLPTEPGEYTINILFAEAH---IPGSPFKATIQPVF-DPSKVRA 1161
Query: 285 NGSGLNDSVAGETAHFSVYLNDMFQYPYPVEVERLQVQIAREVDSSTVWPSISPTQIYNV 344
+G GL AGE A F+V ++ + +E+ + EV I N
Sbjct: 1162 SGPGLERGKAGEAATFTVDCSEAGEAELTIEI-LSDAGVKAEV------------LIQNN 1208
Query: 345 QASAFDVTYTPEKSGIYKILVLCANIVLNGGHSFTKEVTASDVNMTL--SGVVKFTPKVA 402
+ +TY+P G Y I + GGH K T V + SG+ P V
Sbjct: 1209 ADGTYHITYSPAFPGTYTI------TIKYGGHPIPKFPTRVHVQPAVDTSGIKVSGPGVE 1262
Query: 403 KL-ITHEIVVQL-LDSYSNPVLSQQSGLKLEITSMNSSGFSSWMFV-DNNDGSYSGHYLA 459
+ E+ + +D+ S L+ G + +N SG + +V DN DG+Y Y A
Sbjct: 1263 PHGVLREVTTEFTVDARS---LTATGGNHVTARVLNPSGAKTDTYVTDNGDGTYRVQYTA 1319
Query: 460 MDVGTYEMCVSYDGTNFSLCPFLVNV 485
+ G + + V YD PF V V
Sbjct: 1320 YEEGVHLVEVLYDEVAVPKSPFRVGV 1345
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 32/198 (16%)
Query: 349 FDVTYTPEKSGIYKILVLCAN---------IVLNGGHSFTKEVTASDVNMTLSGVVKFTP 399
F V YTP +G Y I+VL AN I ++ H +K V A ++ +GV P
Sbjct: 830 FTVKYTPPGAGHYTIMVLFANQEIPASPFHIKVDPSHDASK-VKAEGPGLSRTGVEVGKP 888
Query: 400 KVAKLITHEIVVQLLDSYSNPVLSQQSGLKLEITSMNSSGFSSWMFVDNNDGSYSGHYLA 459
++T LD + ++ EI +DN+D SY+ Y A
Sbjct: 889 THFTVLTKGAGKAKLDVHFAGAAKGEAVRDFEI-------------IDNHDYSYTVKYTA 935
Query: 460 MDVGTYEMCVSYDGTNFSLCPFLVNVYS----SQYFPKAYDDKVSVWEDESIALDALAND 515
+ G + V+Y G PF+VNV S+ + + KV+V ++++ ++ N
Sbjct: 936 VQQGNMAVTVTYGGDPVPKSPFVVNVAPPLDLSKVKVQGLNSKVAVGQEQAFSV----NT 991
Query: 516 YFAGNNASI-IEFSKPVR 532
AG + + + P R
Sbjct: 992 RGAGGQGQLDVRMTSPSR 1009
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 61/162 (37%), Gaps = 35/162 (21%)
Query: 338 PTQIYNVQASAFDVTYTPEKSGIYKILVLCAN---------IVLNGGHSFTKEVTASDVN 388
P ++ + V YTP G Y + V A+ I + H +K V AS
Sbjct: 1491 PVEVRDNGDGTHTVHYTPATDGPYTVAVKYADQEVPRSPFKIKVLPSHDASK-VRASGPG 1549
Query: 389 MTLSGV-----VKFTPKVAKLITHEIVVQLLDSYSNPVLSQQSGLKLEITSMNSSGFSSW 443
+ SG+ V+FT + VQ+LD P +++ ++
Sbjct: 1550 LNASGIPASLPVEFTIDARDAGQGLLTVQILDPEGKP---KKANIR-------------- 1592
Query: 444 MFVDNNDGSYSGHYLAMDVGTYEMCVSYDGTNFSLCPFLVNV 485
DN DG+Y+ YL G Y + + Y G PF ++
Sbjct: 1593 ---DNGDGTYTVSYLPDMSGRYTITIKYGGDEIPYSPFRIHA 1631
>sp|Q80X90|FLNB_MOUSE Filamin-B OS=Mus musculus GN=Flnb PE=1 SV=3
Length = 2602
Score = 42.4 bits (98), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 10/148 (6%)
Query: 341 IYNVQASAFDVTYTPEKSGIYKILVLCANIVLNGGHSFTKEVTASDVNMTLSGVVKFTPK 400
I N + + VTY P +G+Y + + ++ ++ K A D SG+ F P
Sbjct: 1182 IQNNKDGTYAVTYVPLTAGMYTLTMKYGGELVPHFPAWVKVEPAIDT----SGIKAFGPG 1237
Query: 401 V-AKLITHEIVVQL-LDSYSNPVLSQQSGLKLEITSMNSSGFSSWMFV-DNNDGSYSGHY 457
+ K + E +DS L+Q G ++ N SG S+ FV DN DG+Y Y
Sbjct: 1238 IEGKDVFREATTDFTVDSRP---LTQVGGDHIKAQITNPSGASTECFVKDNADGTYQVEY 1294
Query: 458 LAMDVGTYEMCVSYDGTNFSLCPFLVNV 485
+ G + + V+YD PF V V
Sbjct: 1295 TPFEKGFHVVEVTYDDVPIPNSPFKVAV 1322
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 62/147 (42%), Gaps = 12/147 (8%)
Query: 349 FDVTYTPEKSGIYKILVLCANIVLNGGHSFTKEVTASDVN-MTLSGVVKFTPKVAKLITH 407
+D+ YT K G Y I V + + FT T +V M + V P +T
Sbjct: 1672 YDIFYTAAKPGTYVIYVRFGGVDIPN-SPFTVMATDGEVTAMEEAPVNACPPGFRPWVTE 1730
Query: 408 EIVVQLLDSYS---NP--VLSQQSGLKLEITS---MNSSGFSSWMFVDNNDGSYSGHYLA 459
E V + D P ++ + K EIT M S ++ VDN DG+ + Y
Sbjct: 1731 EAYVPVSDMNGLGFKPFDLVIPFAVRKGEITGTVHMPSGKKATPEIVDNKDGTVTVRYAP 1790
Query: 460 MDVGTYEMCVSYDGTNFSLCP--FLVN 484
+VG +EM + Y G++ P F VN
Sbjct: 1791 TEVGLHEMHIKYRGSHIPESPLQFYVN 1817
Score = 36.2 bits (82), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 61/158 (38%), Gaps = 23/158 (14%)
Query: 336 ISPTQIYNVQASAFDVTYTPEKSGIYKILVLCANIVLNGGHSFTK--------EVTASDV 387
+ P + + VTYTP + G Y + V A+ + K +VTAS
Sbjct: 1466 VEPVNVVDNGDGTHTVTYTPSQEGPYIVSVKYADEEIPRSPFKVKVLPTYDASKVTASGP 1525
Query: 388 NMTLSGVVKFTPKVAKLITHEIVVQLLDSYSNPVLSQQSGLKLEITSMNSSGFSSWMFVD 447
++ GV P E + D+ + L ++IT + + D
Sbjct: 1526 GLSAYGVPASLPV-------EFAIDARDA-------GEGLLAVQITDQEGKPQRATVH-D 1570
Query: 448 NNDGSYSGHYLAMDVGTYEMCVSYDGTNFSLCPFLVNV 485
N DG+Y+ Y+ G Y + V+Y G N L P+ +
Sbjct: 1571 NKDGTYAVTYIPDKTGRYMIGVTYGGDNIPLSPYRIRA 1608
Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 70/183 (38%), Gaps = 28/183 (15%)
Query: 341 IYNVQASAFDVTYTPEKSGIYKILVLCAN---------IVLNGGHSFTKEVTASDVNMTL 391
I+N F V Y P G Y I VL A+ + ++ H +K V A ++
Sbjct: 800 IHNAN-DTFTVKYVPPAPGRYTIKVLFASQEIPASPFRVKVDPSHDASK-VKAEGPGLSK 857
Query: 392 SGVVKFTPKVAKLITHEIVVQLLDSYSNPVLSQQSGLKLEITSMNSSGFSSWMFVDNNDG 451
+GV P TH V + P+ Q S + + +DN D
Sbjct: 858 AGVENGKP------TH-FTVHTKGAGKAPLNVQFS------SPLPGEAVKDLDIIDNYDY 904
Query: 452 SYSGHYLAMDVGTYEMCVSYDGTNFSLCPFLVNVYSSQYFPK----AYDDKVSVWEDESI 507
S++ Y G ++ V+Y G PF V V + K +++V V +D+
Sbjct: 905 SHTVKYTPTQQGNMQVLVTYGGDPIPKSPFTVGVAAPLDLSKIKINGLENRVEVGKDQEF 964
Query: 508 ALD 510
A+D
Sbjct: 965 AID 967
>sp|O75369|FLNB_HUMAN Filamin-B OS=Homo sapiens GN=FLNB PE=1 SV=2
Length = 2602
Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 106/264 (40%), Gaps = 28/264 (10%)
Query: 226 ADLQFEEVAPGVQLFSYTIEESGNFLLTIS-DEKHNKSVSNMPYTYTVFVGYCNGSSSVV 284
A ++ + G SY + G + + I +E H + P+ + + + + S V
Sbjct: 1083 AKIECSDNGDGTCSVSYLPTKPGEYFVNILFEEVH---IPGSPFKADIEMPF-DPSKVVA 1138
Query: 285 NGSGLNDSVAGETAHFSVYLNDMFQYPYPVEVERLQVQIAREVDSSTVWPSISPTQIYNV 344
+G GL GE SV ++ P + +E + DS T + I N
Sbjct: 1139 SGPGLEHGKVGEAGLLSVDCSEAG--PGALGLEAVS-------DSGTK----AEVSIQNN 1185
Query: 345 QASAFDVTYTPEKSGIYKILVLCANIVLNGGHSFTKEVTASDVNMTLSGVVKFTPKV-AK 403
+ + VTY P +G+Y + + ++ + K A D S + F P + K
Sbjct: 1186 KDGTYAVTYVPLTAGMYTLTMKYGGELVPHFPARVKVEPAVDT----SRIKVFGPGIEGK 1241
Query: 404 LITHEIVVQL-LDSYSNPVLSQQSGLKLEITSMNSSGFSSWMFV-DNNDGSYSGHYLAMD 461
+ E +DS L+Q G ++ N SG S+ FV DN DG+Y Y +
Sbjct: 1242 DVFREATTDFTVDSRP---LTQVGGDHIKAHIANPSGASTECFVTDNADGTYQVEYTPFE 1298
Query: 462 VGTYEMCVSYDGTNFSLCPFLVNV 485
G + + V+YD PF V V
Sbjct: 1299 KGLHVVEVTYDDVPIPNSPFKVAV 1322
Score = 35.4 bits (80), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 58/150 (38%), Gaps = 9/150 (6%)
Query: 336 ISPTQIYNVQASAFDVTYTPEKSGIYKILVLCANIVLNGGHSFTKEVTASDVNMTLSGVV 395
+ P + + VTYTP + G Y + V A+ + K + D +
Sbjct: 1466 VEPVNVVDNGDGTHTVTYTPSQEGPYMVSVKYADEEIPRSPFKVKVLPTYDAS------- 1518
Query: 396 KFTPKVAKLITHEIVVQLLDSYSNPVLSQQSGLKLEITSMNSSGFSSWMFV-DNNDGSYS 454
K T L ++ + L ++ GL L + + G V DN DG+Y+
Sbjct: 1519 KVTASGPGLSSYGVPASLPVDFAIDARDAGEGL-LAVQITDQEGKPKRAIVHDNKDGTYA 1577
Query: 455 GHYLAMDVGTYEMCVSYDGTNFSLCPFLVN 484
Y+ G Y + V+Y G + L P+ +
Sbjct: 1578 VTYIPDKTGRYMIGVTYGGDDIPLSPYRIR 1607
Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 14/148 (9%)
Query: 349 FDVTYTPEKSGIYKILVLCANIVLNGGHSFTKEVTASDVNMTLSGVVKFTPKVAK-LITH 407
+D+ YT K G Y I V + + FT T +V V P + +T
Sbjct: 1672 YDIFYTAAKPGTYVIYVRFGGVDIPN-SPFTVMATDGEVTAVEEAPVNACPPGFRPWVTE 1730
Query: 408 EIVVQLLD---------SYSNPVLSQQSGLKLEITSMNSSGFSSWMFVDNNDGSYSGHYL 458
E V + D P ++ + E+ M S ++ VDN DG+ + Y
Sbjct: 1731 EAYVPVSDMNGLGFKPFDLVIPFAVRKGEITGEV-HMPSGKTATPEIVDNKDGTVTVRYA 1789
Query: 459 AMDVGTYEMCVSYDGTNFSLCP--FLVN 484
+VG +EM + Y G++ P F VN
Sbjct: 1790 PTEVGLHEMHIKYMGSHIPESPLQFYVN 1817
Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 103/266 (38%), Gaps = 44/266 (16%)
Query: 265 NMPYT-YTVFVGYCNGSSSV-VNGSGLNDS--VAGETAHFSVYLNDMFQYPYPVEVE--- 317
N+P++ Y V +G + V V G G+ S A E HF+V + + V ++
Sbjct: 726 NIPHSPYRVNIGQGSHPQKVKVFGPGVERSGLKANEPTHFTVDCTEAGEGDVSVGIKCDA 785
Query: 318 RLQVQIAREVDSSTVWPSISPTQIYNVQASAFDVTYTPEKSGIYKILVLCAN-------- 369
R+ + +VD I+N F V Y P +G Y I VL A+
Sbjct: 786 RVLSEDEEDVDFDI---------IHNAN-DTFTVKYVPPAAGRYTIKVLFASQEIPASPF 835
Query: 370 -IVLNGGHSFTKEVTASDVNMTLSGVVKFTPKVAKLITHEIVVQLLDSYSNPVLSQQSGL 428
+ ++ H +K V A ++ +GV P + T L+ N L +
Sbjct: 836 RVKVDPSHDASK-VKAEGPGLSKAGVENGKPTHFTVYTKGAGKAPLNVQFNSPLPGDAVK 894
Query: 429 KLEITSMNSSGFSSWMFVDNNDGSYSGHYLAMDVGTYEMCVSYDGTNFSLCPFLVNVYSS 488
L+I +DN D S++ Y G ++ V+Y G PF V V +
Sbjct: 895 DLDI-------------IDNYDYSHTVKYTPTQQGNMQVLVTYGGDPIPKSPFTVGVAAP 941
Query: 489 QYFPK----AYDDKVSVWEDESIALD 510
K +++V V +D+ +D
Sbjct: 942 LDLSKIKLNGLENRVEVGKDQEFTVD 967
>sp|Q8BTM8|FLNA_MOUSE Filamin-A OS=Mus musculus GN=Flna PE=1 SV=5
Length = 2647
Score = 38.1 bits (87), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 133/367 (36%), Gaps = 60/367 (16%)
Query: 132 IIEFILMKAGNFSLHVEAGNQTLNGSPLPFKVNPGPVDVSNCVAKWKYEVAAWQIFSKME 191
++ F+ + G + + V + GSP P E A SK++
Sbjct: 1030 VVRFVPREEGPYEVEVTYDGVPVPGSPFPL------------------EAVAPTKPSKVK 1071
Query: 192 IFIHQLDQYGNL-VPGFYAFDADVVEKETN---LSIPV-ADLQFEEVAPGVQLFSYTIEE 246
F L Q GN P + D + P A L+ + G SY E
Sbjct: 1072 AFGPGL-QGGNAGSPARFTIDTKGAGTGGLGLTVEGPCEAQLECLDNGDGTCSVSYVPTE 1130
Query: 247 SGNFLLTI--SDEKHNKSVSNMPYT-YTVFVGYCNGSSSV-VNGSGLNDSVAGETAHFSV 302
G++ + I +D +++P + + V C +S V +G GL + AGE F V
Sbjct: 1131 PGDYNINILFAD-------THIPGSPFKAHVAPCFDASKVKCSGPGLERATAGEVGQFQV 1183
Query: 303 YLNDMFQYPYPVEVERLQVQIAREVDSSTVWPSISPTQIY--NVQASAFDVTYTPEKSGI 360
+ L ++I E P ++Y + +TY P G
Sbjct: 1184 DCSSAGS-------AELTIEICSEAGL--------PAEVYIQDHGDGTHTITYIPLCPGA 1228
Query: 361 YKILVLCANIVLNGGHSFTKEVTASDVNMTLSGVVKFTPKV-AKLITHEIVVQLLDSYSN 419
Y + + + S + A D SGV + P + + + E + S
Sbjct: 1229 YTVTIKYGGQPVPNFPSKLQVEPAVDT----SGVQCYGPGIEGQGVFREATTEF--SVDA 1282
Query: 420 PVLSQQSGLKLEITSMNSSGFSSWMFV-DNNDGSYSGHYLAMDVGTYEMCVSYDGTNFSL 478
L+Q G ++ N SG + +V D DG+Y Y + G + + V+YDG+
Sbjct: 1283 RALTQTGGPHVKARVANPSGNLTDTYVQDCGDGTYKVEYTPYEEGVHSVDVTYDGSPVPS 1342
Query: 479 CPFLVNV 485
PF V V
Sbjct: 1343 SPFQVPV 1349
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 446 VDNNDGSYSGHYLAMDVGTYEMCVSYDGTNFSLCPFLVNVY 486
+DN DGS S Y+ + GTY + V+Y G PF V V+
Sbjct: 1403 MDNKDGSCSVEYIPYEAGTYSLNVTYGGHQVPGSPFKVPVH 1443
>sp|Q9VEN1|FLNA_DROME Filamin-A OS=Drosophila melanogaster GN=cher PE=1 SV=2
Length = 2210
Score = 38.1 bits (87), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 162/433 (37%), Gaps = 56/433 (12%)
Query: 129 GYIIIEFILMKAGNFSLHVEAGNQTLNGSPLPFKV-NPGPVDVSNCVAKWKYEVAAWQIF 187
G + I + + G + ++++ + + GSP KV G + + + V +I
Sbjct: 1664 GTLNISYKPTEPGYYIVNLKFADHHVEGSPFTVKVAGEGSNRKREKIQRERDAVPITEIG 1723
Query: 188 SKMEIFIHQLDQYGNLVPGFYAFD-ADVVEKETNLSIPVADLQFEEVAPGVQLFSYTIEE 246
S+ ++ +PG +FD A V +N++ D + +EV G+ + +E
Sbjct: 1724 SQCKLTFK--------MPGITSFDLAACVTSPSNVT---EDAEIQEVEDGLYAVHFVPKE 1772
Query: 247 SGNFLLTISDEKHNKSVSNMPYTYTVFVGYCNGSSSV-VNGSGLNDSVAGETAHFSVYLN 305
G + T+S + P+ +TV +GS V GSGL V GE A F+V+
Sbjct: 1773 LG--VHTVSVRYSEMHIPGSPFQFTVGPLRDSGSHLVKAGGSGLERGVVGEAAEFNVWTR 1830
Query: 306 DMFQYPYPVEVERLQVQIAREVDSSTVWPSISPTQIYNVQASAFDVTYTPEKSGIYKILV 365
+ + VE PS + + + + + DV+Y + G Y++
Sbjct: 1831 EAGGGSLAISVE---------------GPSKADIEFKDRKDGSCDVSYKVTEPGEYRV-- 1873
Query: 366 LCANIVLNGGHSFTKEVTASDVNMTLSGVVKFTPKVAKLITHEIVVQLLDSYSNPVLSQQ 425
+ N H + S + +S K+ + +Q Y V
Sbjct: 1874 ---GLKFNDRH-----IPDSPFKVYVSPDAGDAHKLEVQQFPQGNIQADAPYQFMVRKNG 1925
Query: 426 SGLKLEITSMNSSGFSSWMFVDNNDGS-YSGHYLAMDVGTYEMCVSYDGTNFSLCPFLVN 484
+ +L+ + SG F+ DG YS + + G + + V ++G + PF +
Sbjct: 1926 AKGELDAKIVAPSGTDDDCFIQVIDGEMYSVRFYPRENGIHAIHVKFNGVHIPDSPFRIK 1985
Query: 485 VYSSQYFPKAYD------DKVSVWEDESIALDALANDYFAGNNASIIEFSKPVRGSL--- 535
V P A D+V D + N AG + P + ++
Sbjct: 1986 VGKDVADPAAVHASGNGLDEVKTGH----KADFIINTCNAGVGTLAVSIDGPSKVAMDCT 2041
Query: 536 -LQYGRIFRYTPF 547
++ G RYTP
Sbjct: 2042 EVEEGYKVRYTPL 2054
>sp|P11922|INVA_YERPS Invasin OS=Yersinia pseudotuberculosis serotype I (strain IP32953)
GN=YPTB1668 PE=1 SV=2
Length = 985
Score = 37.0 bits (84), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
Query: 404 LITHEIVVQLLDSYSNPVLSQQSGLKLEI-TSMNSSGFSSWMFVDNNDGSYSGHYLAMDV 462
L+ I ++L D+Y +P Q+G + T++ + G + D+NDG+YS + +
Sbjct: 616 LMASTITLELKDTYGDP----QAGANVAFDTTLGNMG----VITDHNDGTYSAPLTSTTL 667
Query: 463 GTYEMCVSYDGTNFSLCPFLVNVYSSQYFPKA 494
G + V DG FS+ VN +++ P A
Sbjct: 668 GVATVTVKVDGAAFSVPSVTVN-FTADPIPDA 698
>sp|P21333|FLNA_HUMAN Filamin-A OS=Homo sapiens GN=FLNA PE=1 SV=4
Length = 2647
Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 446 VDNNDGSYSGHYLAMDVGTYEMCVSYDGTNFSLCPFLVNVY 486
+DN DGS S Y+ + GTY + V+Y G PF V V+
Sbjct: 1403 MDNKDGSCSVEYIPYEAGTYSLNVTYGGHQVPGSPFKVPVH 1443
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 98/265 (36%), Gaps = 30/265 (11%)
Query: 226 ADLQFEEVAPGVQLFSYTIEESGNFLLTIS-DEKHNKSVSNMPYTYTVFVGYCNGSSSVV 284
A L+ + G SY E G++ + I + H + P+ V + + S
Sbjct: 1110 AQLECLDNGDGTCSVSYVPTEPGDYNINILFADTH---IPGSPFKAHVVPCF-DASKVKC 1165
Query: 285 NGSGLNDSVAGETAHFSVYLNDMFQYPYPVEVERLQVQIAREVDSSTVWPSISPTQIY-- 342
+G GL + AGE F V + L ++I E P ++Y
Sbjct: 1166 SGPGLERATAGEVGQFQVDCSSAGS-------AELTIEICSEAGL--------PAEVYIQ 1210
Query: 343 NVQASAFDVTYTPEKSGIYKILVLCANIVLNGGHSFTKEVTASDVNMTLSGVVKFTPKV- 401
+ +TY P G Y + + + S + A D SGV + P +
Sbjct: 1211 DHGDGTHTITYIPLCPGAYTVTIKYGGQPVPNFPSKLQVEPAVDT----SGVQCYGPGIE 1266
Query: 402 AKLITHEIVVQLLDSYSNPVLSQQSGLKLEITSMNSSGFSSWMFV-DNNDGSYSGHYLAM 460
+ + E + S L+Q G ++ N SG + +V D DG Y Y
Sbjct: 1267 GQGVFREATTEF--SVDARALTQTGGPHVKARVANPSGNLTETYVQDRGDGMYKVEYTPY 1324
Query: 461 DVGTYEMCVSYDGTNFSLCPFLVNV 485
+ G + + V+YDG+ PF V V
Sbjct: 1325 EEGLHSVDVTYDGSPVPSSPFQVPV 1349
>sp|A6UWN1|PURP_META3 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl
5'-monophosphate synthetase OS=Methanococcus aeolicus
(strain Nankai-3 / ATCC BAA-1280) GN=purP PE=3 SV=1
Length = 361
Score = 34.7 bits (78), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 81/204 (39%), Gaps = 31/204 (15%)
Query: 479 CPFLVNVYSSQ----YFP----KAYDDKVSVWEDESIALD-----ALANDYFAGNNASII 525
CP +V ++ YFP + + KV ++++ I D A +Y G N I
Sbjct: 151 CPVMVKFPGARGGRGYFPCSTTEEFWKKVEIFKERGILTDEDVGNAHIEEYVVGTNYCIH 210
Query: 526 EFSKPVRGSLLQYGRIFRY---------TPFKDYIGND-SFSYTIADVNGNLATAAVNIS 575
F P++ + G RY P KD + D + SY I+ GN
Sbjct: 211 YFYSPLKNQVELMGIDSRYESNIDGIVRVPAKDQMELDINPSYVIS---GNFPVVIRE-- 265
Query: 576 VLSIPPQFVSFPSQLQA-TEDMISPRFGGFLGFEIRYSDMLENISVSLSARSGTVLLSSM 634
S+ PQ +L A E+M++P G + +D LE + +SAR S M
Sbjct: 266 --SLLPQVFDMGDKLVAKAEEMVAPGMIGPFCLQSLCNDSLELVVFEMSARIDGGTNSFM 323
Query: 635 MMQFWQPMSSGLSVRIGDGYQKEL 658
+ + SG + +G KE+
Sbjct: 324 NGSAYSCLYSGEPLSMGQRIAKEI 347
>sp|A4WL27|APGM_PYRAR 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM
11321) GN=apgM PE=3 SV=1
Length = 411
Score = 34.7 bits (78), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 50/121 (41%), Gaps = 15/121 (12%)
Query: 515 DYFAGNNA-SIIEFSKP-VR-GSLLQYGRIFRYTPFKDYIGNDSFSYTIADV-------- 563
DY N + I++ P VR GS + +F Y PFK Y G +F ADV
Sbjct: 32 DYLTANGSCGILDPIAPGVRPGSDTAHLALFGYDPFKYYTGRGAFEALGADVALKPGDVA 91
Query: 564 -NGNLATAAVNISVLSIPPQFVSFPSQLQATEDM---ISPRFGGFLGFEIRYSDMLENIS 619
NLAT N V+ P + +A ED+ I G G E+ Y +E+
Sbjct: 92 FRTNLATVDENGVVIDRRAGRYIAPEEAKAVEDLMKKIGEEVGRKYGVEVVYKSTVEHRG 151
Query: 620 V 620
V
Sbjct: 152 V 152
>sp|P04949|FLIC_ECOLI Flagellin OS=Escherichia coli (strain K12) GN=fliC PE=1 SV=2
Length = 498
Score = 33.9 bits (76), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 546 PFKDYIGNDSFSYTIADVNGNLATAAVNISVLSIPPQFVSFPSQLQATEDMISPRFGGFL 605
+D GND+ +Y + D NGNL A VN + ++ + +++ A + + GG
Sbjct: 306 KLQDSKGNDTDTYALKDTNGNLYAADVNETTGAVSVKTITYTDSSGAASSPTAVKLGGDD 365
Query: 606 G 606
G
Sbjct: 366 G 366
>sp|Q5F938|SYP_NEIG1 Proline--tRNA ligase OS=Neisseria gonorrhoeae (strain ATCC 700825 /
FA 1090) GN=proS PE=3 SV=1
Length = 570
Score = 33.9 bits (76), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 619 SVSLSARSGTVLLSSMMMQFWQPMSSGLSVRIGDGYQKELIIEGSVEIISMALQSI---Q 675
S L R+G + ++ + W PM + ++ + ++E+ GSVE++ +Q Q
Sbjct: 22 SHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQ 81
Query: 676 YLGNENFYGEDTIRVSARNKN 696
G FYG++ +R+ R++
Sbjct: 82 ESGRWEFYGKELLRLKDRHER 102
>sp|A6TMN6|THIM_ALKMQ Hydroxyethylthiazole kinase OS=Alkaliphilus metalliredigens (strain
QYMF) GN=thiM PE=3 SV=1
Length = 272
Score = 33.5 bits (75), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 17/134 (12%)
Query: 664 VEIISMALQSIQYLGNENFYGEDTIRVSARNKNGKNDLAVPVFVDPV-------NDPPFI 716
VE++S A + +G N ++ ++ R N +L +PV +DPV
Sbjct: 54 VEVVSKASALVINIGTLNDKRVQSMLLAGRKAN---ELGIPVILDPVGVGASTFRKDTVN 110
Query: 717 QVPKYI---VLKSDADESQIFDRETNKFNVSIGDPDAFNYPGGTSRFLVTFSMEVNDGLL 773
Q+ K I V++ +A E Q+ N S+ D+ ++ G T + + T + + +
Sbjct: 111 QLLKNIDFTVIRGNASEMQVL----MNMNYSVAGVDSMDFGGNTPKMIRTLAQKYKTTVA 166
Query: 774 VTSLPAELINSTEL 787
+T + + T L
Sbjct: 167 ITGATDSICDGTTL 180
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 358,223,990
Number of Sequences: 539616
Number of extensions: 15536857
Number of successful extensions: 33527
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 33332
Number of HSP's gapped (non-prelim): 185
length of query: 974
length of database: 191,569,459
effective HSP length: 127
effective length of query: 847
effective length of database: 123,038,227
effective search space: 104213378269
effective search space used: 104213378269
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)