Your job contains 1 sequence.
>002059
MDRSEINGPNSSTISPDTDASARSPPPPNYNSRAVQEALEHLASIDLCELRYEAKVEHCR
ATRDLRSCGRYVQYVLNSCGHASLCAECRQRCDFCPICRIPVPKKRNSIRLRLYDECVEA
GLISKRCEEGYHDFEDAENQITADVQRLYSLFDTALENNLISLICHYVRDVCMDEAAVSS
DPVVAFLLDEVVVKDWCKRAFKNIIAELKLIYNLEVEVMKTRLSLLLKFQMKLRDISSVI
EVLASSFKDDLSAQVHDLHHFQESILKTKQHLEIMMWCAKQQFLENVRSRHASFTSWHSL
VRQRKSAATERAWYDPVNYSAESTKQDGSLFIEDALANLEIEQEFTQGRGEELDITSLHK
DDEGSSFVRSKIEGVSGCYPFENLRAAVDILFLHGSSDLVLAKQAIFLYYLFDRHWTMPD
ENWRHIVDDFAATFSITRHSLLESLTFYLLDDQADEALQEACHLLPEISGPTTHPKIAQV
LLERENPEAALMVLRWSGRDGGSLLVSLSEAVTAVRIRVECALLTEAFTYQRMLCTKVRE
KKLKFGTIGETFDDLQGGFKTWEQWLEVLVTEICCLCIRRNLVDRMIELPWNTDEEKYLH
KCLLDSATDDPSTTVGSLLVVFYIQRYRYAEAYQVNLKLQSVEQDFISKNPVSEEVLSRM
QSQIHWRTKFIDTSIELLPEVQRQLLKNGKLPLNALNSSEEVEIPEKSDLHGSQELKSIT
LLIPTTADSSLLLPTSNLTPANSSVFESPTGPGRSIKSPHFEVGHYGPSILHERLFMNKE
GSTYDFGVSKEFKVDGFSTPGVCQSSPMNQTPLKGRNFSSRTLSNSHRRDKVSDKISPVP
EQNGFLSQHLNTIHHYSHRMTTNPASTPVSNRGLHNDLAGDLHSNLSSKRVHSDREDGLR
YMISSEDPMDVSLSNGKKGFAVEDRQAIAGGGLRWRSDETSDEEEKQSPESAMGVASYTT
PRRGIRRSRFARR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002059
(973 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2063917 - symbol:HOS1 "HIGH EXPRESSION OF OSMO... 2318 2.2e-253 2
UNIPROTKB|Q8WYP5 - symbol:AHCTF1 "Protein ELYS" species:9... 106 3.8e-06 5
RGD|1561291 - symbol:Ahctf1 "AT hook containing transcrip... 100 6.9e-06 4
ZFIN|ZDB-GENE-070521-2 - symbol:ahctf1 "AT hook containin... 107 3.1e-05 4
MGI|MGI:1915033 - symbol:Ahctf1 "AT hook containing trans... 96 4.2e-05 3
>TAIR|locus:2063917 [details] [associations]
symbol:HOS1 "HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE
GENES 1" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEP]
[GO:0009409 "response to cold" evidence=IMP] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=RCA;IMP;IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0007267 "cell-cell signaling"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010267 "production of ta-siRNAs involved in RNA
interference" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0035196 "production of miRNAs involved
in gene silencing by miRNA" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] PROSITE:PS50089
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0009409 GO:GO:0004842 EMBL:AC003000 InterPro:IPR025151
Pfam:PF13934 EMBL:BT004255 EMBL:BT005517 IPI:IPI00518974 PIR:T01011
RefSeq:NP_181511.3 UniGene:At.37128 ProteinModelPortal:Q84JU6
SMR:Q84JU6 STRING:Q84JU6 PaxDb:Q84JU6 PRIDE:Q84JU6
EnsemblPlants:AT2G39810.1 GeneID:818568 KEGG:ath:AT2G39810
TAIR:At2g39810 eggNOG:NOG324605 HOGENOM:HOG000083689
InParanoid:Q84JU6 KO:K16278 OMA:VDVLFLH PhylomeDB:Q84JU6
ProtClustDB:CLSN2681711 Genevestigator:Q84JU6 GermOnline:AT2G39810
Uniprot:Q84JU6
Length = 927
Score = 2318 (821.0 bits), Expect = 2.2e-253, Sum P(2) = 2.2e-253
Identities = 461/818 (56%), Positives = 583/818 (71%)
Query: 1 MDRSEINGPNSSTISPDTDASARSPPPPNYNSRAVQEALEHLASIDLCELRYEAKVEHCR 60
MD EING S+ S P PNY+S+ VQEAL+HLASI+L EL EAKVE CR
Sbjct: 1 MDTREINGFASAA------RSISLPTQPNYSSKPVQEALKHLASINLRELCNEAKVERCR 54
Query: 61 ATRDLRSCGRYVQYVLNSCGHASLCAECRQRCDFCPICRIPVPKKRNSIRLRLYDECVEA 120
ATRDL SCGR+V YVLN CGHASLC EC QRCD CPICR +PK + +RLRLY ECVEA
Sbjct: 55 ATRDLASCGRFVNYVLNPCGHASLCTECCQRCDVCPICRSTLPKFGDRLRLRLYYECVEA 114
Query: 121 GLISKRCEEGYHDFEDAENQITADVQRLYSLFDTALENNLISLICHYVRDVCMDEAAVSS 180
GLIS+ EE D ++ E+Q+ ADV RLYSLFD A+ NNLIS++CHY+ +VCMDE AVSS
Sbjct: 115 GLISRTHEEASQDSDEDEHQLAADVHRLYSLFDVAMNNNLISVVCHYITNVCMDETAVSS 174
Query: 181 DPVVAFLLDEVVVKDWCKRAFKNIIAELKLIYNLEVEVMKTRLSLLLKFQMKLRDISSVI 240
DPV+AFLLDEVVVKDW KR F++ +AEL+ IYNLE + M+ L LL+ ++ I SV+
Sbjct: 175 DPVIAFLLDEVVVKDWVKRTFRSTLAELQEIYNLETKEMQAWLDKLLRCSKQVAGICSVL 234
Query: 241 EVLASSFKDDLSAQVHDLHHFQESILKTKQHLEIMMWCAKQQFLENVRSRHASFTSWHSL 300
EV+ S+FK +S Q+ D+ +E+I KTKQHL+IM+WC + FL++VRSR+++FTSW++L
Sbjct: 235 EVMESAFKGSVSPQLQDVQTLRENIGKTKQHLDIMVWCIRHGFLDDVRSRYSNFTSWNAL 294
Query: 301 VRQRKSAATERAWYDPVNYSAESTKQDGSLFIEDALANLEIEQEFTQGRGEELDITSLHK 360
V +RKS A +RAW D V+ S++ + Q SLFIEDAL NLE E E++Q G +L++ L K
Sbjct: 295 VGERKSNAVKRAWPDAVDQSSDCSVQSASLFIEDALENLEREPEYSQEIGADLEVGRLQK 354
Query: 361 DDEGSSFVRSKIEGVSGCYPFENLRAAVDILFLHGSSDLVLAKQAIFLYYLFDRHWTMPD 420
D SF+RSKIEG SG YPFENLR A D+LFLHG SDLV+AKQAIFLYYLFDRHWT P+
Sbjct: 355 DKR--SFLRSKIEGTSGSYPFENLRTAADMLFLHGGSDLVVAKQAIFLYYLFDRHWTTPE 412
Query: 421 ENWRHIVDDFAATFSITRHSLLESLTFYLLDDQADEALQEACHLLPEISGPTTHPKIAQV 480
+ W+H +DDFAATF ITRHSLLES FYLLDD ++EALQEAC +LPEI GP T+PK+AQV
Sbjct: 413 KYWKHTIDDFAATFGITRHSLLESFVFYLLDDHSEEALQEACRILPEICGPETYPKVAQV 472
Query: 481 LLERENPEAALMVLRWSGRDGGSLLVSLSEAVTAVRIRVECALLTEAFTYQRMLCTKVRE 540
LLER+NPE ALMVLRWSGRDG S LVS+ EAVTA+R+RVEC LL+EAFTYQR LC KV+E
Sbjct: 473 LLERDNPETALMVLRWSGRDGVSELVSIGEAVTALRVRVECGLLSEAFTYQRTLCLKVKE 532
Query: 541 KKLKFGTIGETFDDLQGGFKTWEQWLEVLVTEICCLCIRRNLVDRMIELPWNTDEEKYLH 600
LK G + DDL +W +W+E+LV E CCL IRRNLVDR+IELPWN DEEKYLH
Sbjct: 533 NNLKNGAVKHASDDLD--IWSWTEWMEILVNEFCCLSIRRNLVDRIIELPWNPDEEKYLH 590
Query: 601 KCLLDSATDDPSTTVGSLLVVFYIQRYRYAEAYQVNLKLQSVEQDFISKNPVSEEVLSRM 660
+CLLDSATDDPS+ VGSLLVVFY+QRYRY +AYQV+L+LQ +E+ F+S N + EEV+ RM
Sbjct: 591 RCLLDSATDDPSSAVGSLLVVFYLQRYRYIQAYQVDLRLQKIEEAFVSDNQIGEEVMFRM 650
Query: 661 QSQIHWRTKFIDTSIELLPEVQRQLLKNGKLPLNALNSSEEVEIPEKSDLHGSQELKSIT 720
+SQ HWR + +D +I++LP +Q+Q +++G+ + E +KSDL + ++ IT
Sbjct: 651 RSQSHWRKELVDRAIDILPVIQQQQVRSGQFS----EMEDASEGAKKSDLPDAPDM--IT 704
Query: 721 LLIPTTADXXXXXXXXXXXXANSSVFESPTGPGRSIKSPHFEVGHYGPSILHERLFMN-K 779
+P AN++ P S P +G+ + H RLF N
Sbjct: 705 SSVP-----FATTNSVFLQSANNARAREPVANNGSPFQPGHMIGNASHDLSHGRLFTNAN 759
Query: 780 EGSTYDF-GVSKEFKVDGFSTPGVCQSSPMNQTPLKGR 816
G + V+K K STP + + L+G+
Sbjct: 760 RGQKSEVRSVTKNLKFGEMSTPFKDLNRARGNSQLQGK 797
Score = 145 (56.1 bits), Expect = 2.2e-253, Sum P(2) = 2.2e-253
Identities = 47/151 (31%), Positives = 73/151 (48%)
Query: 811 TPLKGRNFSSRTLSNSHRRDKVSDKISPVPEQNGFLSQHLNTIHHYSHRMTTNPASTPVS 870
TP K N R NS + K +++ SP + ++ ++++ Y R+T N PV+
Sbjct: 780 TPFKDLN---RARGNSQLQGKRTEESSPEVNVDRYIENNMSS--PYLRRITAN---NPVT 831
Query: 871 NRGLHNDLAGDLH---SNLSSKRVHSDREDGLRYMISSEDPMDVSLS---NGKKGFAVED 924
+ N L G S R+ D+++ + +DPMD+S S N A E
Sbjct: 832 VKSSSNHLNGSSQKPESTFFGTRMQPDKDN----FVDLDDPMDMSSSLKDNNNNVLATES 887
Query: 925 RQAIAGGGLRWRSDETSDEEEKQSPESAMGV 955
R GGLRWRSDETSD+E++ + +M V
Sbjct: 888 RNN--SGGLRWRSDETSDDEDELTSFGSMPV 916
>UNIPROTKB|Q8WYP5 [details] [associations]
symbol:AHCTF1 "Protein ELYS" species:9606 "Homo sapiens"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IEA] [GO:0031080 "nuclear
pore outer ring" evidence=IDA] [GO:0000777 "condensed chromosome
kinetochore" evidence=IDA] [GO:0000785 "chromatin" evidence=IDA]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0005643 "nuclear pore"
evidence=IDA] [GO:0051292 "nuclear pore complex assembly"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0000087 "M
phase of mitotic cell cycle" evidence=TAS] [GO:0000236 "mitotic
prometaphase" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0031965
"nuclear membrane" evidence=IDA] InterPro:IPR017956 SMART:SM00384
GO:GO:0005829 Reactome:REACT_115566 GO:GO:0005654
Reactome:REACT_21300 GO:GO:0003677 GO:GO:0015031 GO:GO:0031965
GO:GO:0005643 GO:GO:0003700 GO:GO:0000910 GO:GO:0016363
GO:GO:0051028 GO:GO:0000236 GO:GO:0000777 GO:GO:0051292
InterPro:IPR025151 Pfam:PF13934 eggNOG:NOG70776 EMBL:AB059277
EMBL:AY157619 EMBL:AC113174 EMBL:AL080144 EMBL:AF173978
EMBL:BC012307 IPI:IPI00954159 IPI:IPI00979341 PIR:T12528
RefSeq:NP_056261.4 UniGene:Hs.300887 ProteinModelPortal:Q8WYP5
IntAct:Q8WYP5 MINT:MINT-3308913 STRING:Q8WYP5 PhosphoSite:Q8WYP5
DMDM:259016354 PaxDb:Q8WYP5 PRIDE:Q8WYP5 Ensembl:ENST00000326225
Ensembl:ENST00000366508 Ensembl:ENST00000391829 GeneID:25909
KEGG:hsa:25909 UCSC:uc001ibv.2 CTD:25909 GeneCards:GC01M247002
HGNC:HGNC:24618 HPA:HPA031658 MIM:610853 neXtProt:NX_Q8WYP5
PharmGKB:PA142672631 OMA:FTWQVNI OrthoDB:EOG4FR0QQ ChiTaRS:AHCTF1
GenomeRNAi:25909 NextBio:47390 PMAP-CutDB:Q8WYP5
ArrayExpress:Q8WYP5 Bgee:Q8WYP5 CleanEx:HS_AHCTF1
Genevestigator:Q8WYP5 GermOnline:ENSG00000153207 Uniprot:Q8WYP5
Length = 2266
Score = 106 (42.4 bits), Expect = 3.8e-06, Sum P(5) = 3.8e-06
Identities = 45/179 (25%), Positives = 86/179 (48%)
Query: 373 EGVSGCYPFENLRAAVDILFLHGSSDLVLAKQAIFLYYLFDRHWTMPDENWRHIVDDFAA 432
EG +G YP +L A +D+ L G ++ AK +I +Y L D ++ P++ I + F
Sbjct: 744 EGGTGKYPPASLHAVLDMYLLDGVTEA--AKHSITIYLLLDIMYSFPNKTDTPI-ESFPT 800
Query: 433 TFSITRHSLLESLTFYLLD-DQADEALQEACHLLPEISGPTT--HPKIAQVLLER-ENPE 488
F+I+ + F+L+D + + L H P + P + H KI Q + + E+ +
Sbjct: 801 VFAISWGQVKLIQGFWLIDHNDYESGLDLLFH--PATAKPLSWQHSKIIQAFMSQGEHRQ 858
Query: 489 AA--LMVLRWSGRDGGSLLVSLSEAVTAVRIRVECALLTEAFTYQRMLCTKVR-EKKLK 544
A + ++ + G +++ L+ V + C + EA+ + R C ++ E+ LK
Sbjct: 859 ALRYIQTMKPTVSSGNDVILHLT-----VLLFNRC--MVEAWNFLRQHCNRLNIEELLK 910
Score = 86 (35.3 bits), Expect = 3.8e-06, Sum P(5) = 3.8e-06
Identities = 35/135 (25%), Positives = 64/135 (47%)
Query: 566 LEVLVTEICCLCIRRNLVDRMIELPWNTDEEKYLHKCLLDSATDDPSTTVGSLLVVFYIQ 625
+E L+ + +C L++ +++LP+ E++ L K L SA S L+V ++Q
Sbjct: 905 IEELLKHMYEVCQEMGLMEDLLKLPFTDTEQECLVKFLQSSA----SVQNHEFLLVHHLQ 960
Query: 626 RYRYAEAYQVNLKLQ-SVEQDFISKNPVSEEVLSRMQSQIHWRTKFIDTSIELLPEVQRQ 684
R Y A ++N L+ +V D ++P R++ + R +D ++LP V R+
Sbjct: 961 RANYVPALKLNQTLKINVMND---RDP-------RLRERSLARNSILDQYGKILPRVHRK 1010
Query: 685 LLKNGKLPLNALNSS 699
L P + SS
Sbjct: 1011 LAIERAKPYHLSTSS 1025
Score = 66 (28.3 bits), Expect = 3.8e-06, Sum P(5) = 3.8e-06
Identities = 34/169 (20%), Positives = 78/169 (46%)
Query: 114 YDECVEAGLISKRCEEGYHDFEDAENQITADVQRLYSLFDTALENNLISLICHYVRDVCM 173
Y+ C+ AGL+S R F D + + ++L ++ A++ + + L+ Y+R
Sbjct: 518 YNRCLVAGLLSPR-------FVDVQPSSLSQEEQLEAILSAAIQTSSLGLLTGYIRRWIT 570
Query: 174 DE---AAVSSDPVVAFLLDEVVVKDWCKRAFKNIIAELKLIYNLEVEVMKTR-LSLLLKF 229
+E +A + V+ + ++VV+ K F + L ++ M + + + +
Sbjct: 571 EEQPNSATNLRFVLEWTWNKVVLT---KEEFDRLCVPL---FDGSCHFMDPQTIQSIQQC 624
Query: 230 QMKLRDISSVIEVLASSFKDDLSAQVHDLHH-FQESILKTKQHLEIMMW 277
+ L +++ V+ AS ++ + DL + F S L Q+ ++++W
Sbjct: 625 YLLLSNLNIVLSCFASEAREITERGLIDLSNKFVVSHLIC-QYAQVVLW 672
Score = 50 (22.7 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 26/119 (21%), Positives = 57/119 (47%)
Query: 156 LENNLISLICHYVRDVC-MDEAAVSSDPVVAFLLDEVVVKDWCKRAFKNIIAELKLIYNL 214
LE S++C Y + + +A V V A ++ ++ + +++ L+ ++ +
Sbjct: 98 LEETEGSVLCLYDLGISKVVKAVVLPGRVTA--IEPIINHGGASASTQHLHPSLRWLFGV 155
Query: 215 EVEVMKTRLSLLLKFQMKLRDIS-SVIEVLASSFKDDLSAQVHDLHHFQESILKTKQHL 272
V T + +L + L D+S + EV AS + L+ ++ H +ES+++ +HL
Sbjct: 156 AAVV--TDVGQILLVDLCLDDLSCNQNEVEASDL-EVLTGIPAEVPHIRESVMRQGRHL 211
Score = 45 (20.9 bits), Expect = 3.8e-06, Sum P(5) = 3.8e-06
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 787 GVSKEFKVDGFSTPGVCQSSPMNQTPLKGRNFSSRTLSNSHRRD 830
G + + K++ F+TP C + P+ LK ++ ++ NS ++
Sbjct: 1245 GAADDSKLEVFTTPKKC-AVPVETEWLKSKDRTTSFFLNSPEKE 1287
Score = 43 (20.2 bits), Expect = 3.8e-06, Sum P(5) = 3.8e-06
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 936 RSDETSDEEEKQSPESAMGVASYT 959
R+DE + +E + E + AS+T
Sbjct: 2068 RTDEMTHKETNEQEERLLATASFT 2091
>RGD|1561291 [details] [associations]
symbol:Ahctf1 "AT hook containing transcription factor 1"
species:10116 "Rattus norvegicus" [GO:0000777 "condensed chromosome
kinetochore" evidence=IEA;ISO] [GO:0000785 "chromatin"
evidence=IEA;ISO] [GO:0000910 "cytokinesis" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0016363 "nuclear
matrix" evidence=IEA;ISO] [GO:0031080 "nuclear pore outer ring"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA;ISO]
[GO:0051292 "nuclear pore complex assembly" evidence=IEA;ISO]
[GO:0005643 "nuclear pore" evidence=ISO] RGD:1561291 GO:GO:0005737
GO:GO:0031965 GO:GO:0000785 GO:GO:0003700 GO:GO:0000910
GO:GO:0016363 GO:GO:0000777 GO:GO:0051292 InterPro:IPR025151
Pfam:PF13934 GeneTree:ENSGT00390000018900 CTD:25909 OMA:FTWQVNI
OrthoDB:EOG4FR0QQ GO:GO:0031080 IPI:IPI00393676
RefSeq:NP_001258199.1 PRIDE:D3ZZZ0 Ensembl:ENSRNOT00000035875
GeneID:360886 KEGG:rno:360886 UCSC:RGD:1561291 NextBio:674490
Uniprot:D3ZZZ0
Length = 2240
Score = 100 (40.3 bits), Expect = 6.9e-06, Sum P(4) = 6.9e-06
Identities = 37/144 (25%), Positives = 68/144 (47%)
Query: 566 LEVLVTEICCLCIRRNLVDRMIELPW-NTDEEKYLHKCLLDSATDDPSTTVGSLLVVFYI 624
+E L+ +C L++ +++LP+ NT++E CL++ S L+V ++
Sbjct: 905 IEELLKHAYEVCQEMGLMEDLLKLPFTNTEQE-----CLVNFLQSSSSVQNHEFLLVHHL 959
Query: 625 QRYRYAEAYQVNLKLQSVEQDFISKNPVSEEVLSRMQSQIHWRTKFIDTSIELLPEVQRQ 684
QR Y A ++N L KN ++ + R++ + R +D ++LP VQR+
Sbjct: 960 QRANYISALKLNQTL---------KNNLTSDRDPRLRERSVTRNSILDQYGKILPRVQRK 1010
Query: 685 LLKNGKLPLNALNSS--EEVEIPE 706
L P + SS +EV P+
Sbjct: 1011 LAVERAKPYHLSTSSVFQEVSRPK 1034
Score = 97 (39.2 bits), Expect = 6.9e-06, Sum P(4) = 6.9e-06
Identities = 35/126 (27%), Positives = 60/126 (47%)
Query: 373 EGVSGCYPFENLRAAVDILFLHGSSDLVLAKQAIFLYYLFDRHWTMPDENWRHIVDDFAA 432
EG +G YP ++ A +DI L S+ +K AI +Y L D ++ P++ I + F
Sbjct: 744 EGGTGKYPPASIHALLDIYLLDNISEA--SKHAITIYLLLDIMYSFPNKTDTPI-ESFPT 800
Query: 433 TFSITRHSLLESLTFYLLD-DQADEALQEACHLLPEISGPTT--HPKIAQVLLERENPEA 489
F+I+ + F+LLD + + L H P + P + H KI + + + +
Sbjct: 801 AFAISWGQVKLVQGFWLLDHNDYENGLDLLFH--PVTAKPASWQHSKIIEAFMSQGEHKQ 858
Query: 490 ALMVLR 495
AL L+
Sbjct: 859 ALRYLQ 864
Score = 56 (24.8 bits), Expect = 6.9e-06, Sum P(4) = 6.9e-06
Identities = 17/76 (22%), Positives = 38/76 (50%)
Query: 114 YDECVEAGLISKRCEEGYHDFEDAENQITADVQRLYSLFDTALENNLISLICHYVRDVCM 173
Y+ C+ AGL+S R D + + ++L ++ A++ + + L+ Y+R +
Sbjct: 518 YNRCLVAGLLSPR-------LIDIQPSSLSQEEQLEAILSAAIQTSSLGLLTGYIRTWII 570
Query: 174 DEAAVSSDPVVAFLLD 189
+E +S + F+L+
Sbjct: 571 EEQP-NSAANLRFVLE 585
Score = 50 (22.7 bits), Expect = 2.6e-05, Sum P(4) = 2.6e-05
Identities = 24/113 (21%), Positives = 55/113 (48%)
Query: 162 SLICHYVRDVC-MDEAAVSSDPVVAFLLDEVVVKDWCKRAFKNIIAELKLIYNLEVEVMK 220
S++C Y + + +A V V A ++ ++ + +++ L+ ++ + V
Sbjct: 104 SVLCLYDLGISRVVKAVVLPGRVTA--IEPIINHGGASASTQHLHPSLRWLFGVAAVV-- 159
Query: 221 TRLSLLLKFQMKLRDIS-SVIEVLASSFKDDLSAQVHDLHHFQESILKTKQHL 272
T + +L + L D+S S EV AS + ++ ++ H +ES+++ +HL
Sbjct: 160 TDVGQILLIDLCLDDLSCSQNEVEASDL-EVITGIPAEVPHIRESVMREGRHL 211
Score = 47 (21.6 bits), Expect = 6.9e-06, Sum P(4) = 6.9e-06
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 795 DGFSTPGVCQSSPMNQTPL---KGRNFSSRTLSNSHRRDKVSDK 835
DG +TPG Q+SP + P+ RN +R +S + V +K
Sbjct: 1970 DG-TTPGKEQTSPQKEGPVVRRSTRNTPARNVSTLEKPILVPNK 2012
Score = 39 (18.8 bits), Expect = 4.0e-05, Sum P(4) = 4.0e-05
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 936 RSDETSDEEEKQSPESAMG 954
RSD+T + + SPE G
Sbjct: 1323 RSDQTLEYHDAPSPEDLEG 1341
>ZFIN|ZDB-GENE-070521-2 [details] [associations]
symbol:ahctf1 "AT hook containing transcription
factor 1" species:7955 "Danio rerio" [GO:0048565 "digestive tract
development" evidence=IMP] [GO:0051292 "nuclear pore complex
assembly" evidence=IMP] ZFIN:ZDB-GENE-070521-2 GO:GO:0048565
GO:GO:0051292 InterPro:IPR025151 Pfam:PF13934
GeneTree:ENSGT00390000018900 CTD:25909 EMBL:BX649415
IPI:IPI00931171 RefSeq:XP_697727.4 UniGene:Dr.162178
UniGene:Dr.75414 Ensembl:ENSDART00000115321 GeneID:553494
KEGG:dre:553494 NextBio:20880239 ArrayExpress:F1QX56 Bgee:F1QX56
Uniprot:F1QX56
Length = 2527
Score = 107 (42.7 bits), Expect = 3.1e-05, Sum P(4) = 3.1e-05
Identities = 51/189 (26%), Positives = 85/189 (44%)
Query: 373 EGVSGCYPFENLRAAVDILFLHGSSDLVLAKQAIFLYYLFDRHWTMPDENWRHIVDDFAA 432
EG +G YP +L A +DI L + AK AI +Y L D ++ P+++ V+ F
Sbjct: 746 EGGTGHYPPPSLHALLDIYLLENIEES--AKHAIVIYLLLDVMYSFPNKSGAS-VESFPT 802
Query: 433 TFSITRH--SLLESLTFYLLDDQADEALQEACHLLPEISGPT---THPKIAQVLLERENP 487
F+I L++ L +LLD E+ E L P S H ++ Q L+ ++
Sbjct: 803 AFAIPIGLVKLVQGL--WLLDHHDHESSLELL-LHPATSHSLWSWQHERVLQALMCQQKH 859
Query: 488 EAALMVLRWSGRDGGSLLVSLSEAVTAVRIRVECALLTEAFTYQRMLCTKVR-EKKLKFG 546
AL L L + S+A + + + + EA+ R C K+ E+ ++F
Sbjct: 860 SIALRYLHVMKPP----LCTTSQAKLCLSVFLHNRCIVEAWALLRQHCNKLNTEEVMRF- 914
Query: 547 TIGETFDDL 555
+ ET +L
Sbjct: 915 -LFETCQEL 922
Score = 70 (29.7 bits), Expect = 3.1e-05, Sum P(4) = 3.1e-05
Identities = 39/189 (20%), Positives = 73/189 (38%)
Query: 577 CIRRNLVDRMIELPWNTDEEKYLHKCLLDSATDDPSTTVGSLLVVFYIQRYRYAEAYQVN 636
C L+ +++LP E++ L + L + LL+V Y+Q+ Y A Q+N
Sbjct: 919 CQELGLMKELLKLPLGLAEQECLQRFLQSNGGFQNR----ELLMVHYLQQANYVPALQLN 974
Query: 637 LKLQ-SVEQDFISKNPVSEEVLSRMQSQIHWRTKFIDTSIELLPEVQRQLLKNGKLPLNA 695
L+ ++ D ++P +M+ + + R ++ ++LP VQR+L P
Sbjct: 975 QTLKLNLAAD---RDP-------KMKERSNTRNSILNQYGKVLPRVQRKLAIERAKPYQH 1024
Query: 696 LNSSEEVEIPEK----SDLHGSQELKSITLLIPTTADXXXXXXXXXXXXANSSVFESPTG 751
V+ P+ + S+ + + I SS F+SP
Sbjct: 1025 PTLIHRVKRPQPLSTVTKRSASENVMTRAAFINNVYSKIEEVWAGNNTTPESSPFKSPKE 1084
Query: 752 PGRSIKSPH 760
+ S H
Sbjct: 1085 SEMQVPSRH 1093
Score = 59 (25.8 bits), Expect = 3.1e-05, Sum P(4) = 3.1e-05
Identities = 36/146 (24%), Positives = 59/146 (40%)
Query: 743 SSVFESPTGPGRSIKSPHFEVGHYGPSI-LHERLFMNKEGSTYDFGVS---KEF----KV 794
S + ++P P RS+K FE ++ L + L + E S D GVS K+ ++
Sbjct: 1915 SKMQDAPHTP-RSVKV--FETPSPENALPLEQLLEKDNEVSVLDTGVSAIAKDVAPANQI 1971
Query: 795 DGFSTPGVCQS-SPMNQTPLKGRNFS-SRTLSNSHRRDKVSDKISPVPEQNGFLSQHLNT 852
D +TP + + +N T R S R S + K+ + + ++L
Sbjct: 1972 D--TTPSLAEEVEELNTTKQAARPKSPGRPKSPGRPKSPARTKVERPGKDTEEIKENLKE 2029
Query: 853 IHHYSHRMTTNPASTPVSNRGLHNDL 878
+ H R T + PV N DL
Sbjct: 2030 VQHSPSRRTRKTVTFPVPNLEADKDL 2055
Score = 59 (25.8 bits), Expect = 3.1e-05, Sum P(4) = 3.1e-05
Identities = 40/200 (20%), Positives = 86/200 (43%)
Query: 90 QRCDFCPICRIPVPKKRNSIRLRLYDECVEAGLISKRCEEGYHDFEDAENQITADVQRLY 149
Q+ C + ++ P +SI Y C+ +GL+S R D + + ++L
Sbjct: 496 QKETLCYLKKV-APSLGDSIS-NGYSRCLMSGLLSSR-------LADVQPSSLSQEEQLD 546
Query: 150 SLFDTALENNLISLICHYVRDVCMDE---AAVSSDPVVAFLLDEVVVKDWCKRAFKNIIA 206
++ TA+E + + LI +R +E +AV+ ++ + ++VV K I A
Sbjct: 547 AILCTAVETSSLGLITGCIRQWTTEEQPGSAVNLRYILEWAWNKVV---HTKEELDEICA 603
Query: 207 ELKLIYNLEVEVMKTR-LSLLLKFQMKLRDISSVIEVLASSFKD-DLSAQVHDLHHFQES 264
L ++ ++ L LL Q L ++S++ L + ++ + ++ S
Sbjct: 604 PL---FDSSANFTDSQTLQLLQHSQRLLANLSTIFHCLLNEAQELTQKGLIGLMNKCMVS 660
Query: 265 ILKTKQHLEIMMWCAKQQFL 284
L Q+ ++++W + L
Sbjct: 661 SL-VSQYAQVVLWFCRTGLL 679
>MGI|MGI:1915033 [details] [associations]
symbol:Ahctf1 "AT hook containing transcription factor 1"
species:10090 "Mus musculus" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IMP] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005643 "nuclear pore" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016363 "nuclear
matrix" evidence=IDA] [GO:0030097 "hemopoiesis" evidence=TAS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0051292 "nuclear pore complex assembly" evidence=ISO]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017956
SMART:SM00384 MGI:MGI:1915033 GO:GO:0005737 GO:GO:0045893
GO:GO:0005654 GO:GO:0007067 GO:GO:0003677 GO:GO:0015031
GO:GO:0031965 GO:GO:0000785 GO:GO:0003700 GO:GO:0006351
GO:GO:0000910 GO:GO:0030097 GO:GO:0016363 GO:GO:0051028
GO:GO:0000777 GO:GO:0051292 InterPro:IPR025151 Pfam:PF13934
eggNOG:NOG70776 GeneTree:ENSGT00390000018900 CTD:25909 OMA:FTWQVNI
OrthoDB:EOG4FR0QQ EMBL:AB059278 EMBL:AB081498 EMBL:BC138343
EMBL:BC138344 EMBL:AK078022 IPI:IPI00122594 RefSeq:NP_080651.2
UniGene:Mm.128165 ProteinModelPortal:Q8CJF7 STRING:Q8CJF7
PhosphoSite:Q8CJF7 PaxDb:Q8CJF7 PRIDE:Q8CJF7
Ensembl:ENSMUST00000027768 GeneID:226747 KEGG:mmu:226747
UCSC:uc011wxn.1 HOGENOM:HOG000293244 InParanoid:B2RRC8
NextBio:378313 Bgee:Q8CJF7 CleanEx:MM_AHCTF1 Genevestigator:Q8CJF7
GermOnline:ENSMUSG00000026491 GO:GO:0031080 Uniprot:Q8CJF7
Length = 2243
Score = 96 (38.9 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 42/155 (27%), Positives = 70/155 (45%)
Query: 566 LEVLVTEICCLCIRRNLVDRMIELPWNTDEEKYLHKCLLDSATDDPSTTVGSLLVVFYIQ 625
+E L+ +C L++ +++LP+ E++ L K L S+T S L+V ++Q
Sbjct: 905 IEELLKHAYEVCQEMGLMEDLLKLPFTNTEQECLVK-FLQSST---SVENHEFLLVHHLQ 960
Query: 626 RYRYAEAYQVNLKLQSVEQDFISKNPVSEEVLSRMQSQIHWRTKFIDTSIELLPEVQRQL 685
R Y A LKL I KN + + R++ + R +D ++LP VQR+L
Sbjct: 961 RANYISA----LKLNQ-----ILKNNLMSDRDPRLRERSVTRNSILDQYGKILPRVQRKL 1011
Query: 686 LKNGKLPLNALNSSEEVEIPEKSDLHGSQELKSIT 720
P + SS E+ L + K+IT
Sbjct: 1012 AVERAKPYHLSTSSVFHEVSRPKPLSAFPK-KAIT 1045
Score = 94 (38.1 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 34/126 (26%), Positives = 60/126 (47%)
Query: 373 EGVSGCYPFENLRAAVDILFLHGSSDLVLAKQAIFLYYLFDRHWTMPDENWRHIVDDFAA 432
EG +G YP ++ A +DI L ++ +K AI +Y L D ++ P++ I + F
Sbjct: 744 EGGTGRYPPASIHALLDIYLLDNITEA--SKHAITIYLLLDIMYSFPNKTDTPI-ESFPT 800
Query: 433 TFSITRHSLLESLTFYLLD-DQADEALQEACHLLPEISGPTT--HPKIAQVLLERENPEA 489
F+I+ + F+LLD + + L H P + P + H KI + + + +
Sbjct: 801 AFAISWGQVKLVQGFWLLDHNDYENGLDLLFH--PVTAKPASWQHSKIIEAFMSQGEHKQ 858
Query: 490 ALMVLR 495
AL L+
Sbjct: 859 ALRYLQ 864
Score = 56 (24.8 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 17/76 (22%), Positives = 38/76 (50%)
Query: 114 YDECVEAGLISKRCEEGYHDFEDAENQITADVQRLYSLFDTALENNLISLICHYVRDVCM 173
Y+ C+ AGL+S R D + + ++L ++ A++ + + L+ Y+R +
Sbjct: 518 YNRCLVAGLLSPR-------LIDIQPSSLSQEEQLEAILSAAIQTSSLGLLTGYIRTWII 570
Query: 174 DEAAVSSDPVVAFLLD 189
+E +S + F+L+
Sbjct: 571 EEQP-NSAANLRFVLE 585
Score = 45 (20.9 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 23/113 (20%), Positives = 54/113 (47%)
Query: 162 SLICHYVRDVC-MDEAAVSSDPVVAFLLDEVVVKDWCKRAFKNIIAELKLIYNLEVEVMK 220
S++C Y + + +A V V A ++ ++ + +++ L+ ++ + V
Sbjct: 104 SVLCLYDLGISRVVKAVVLPGRVTA--IEPIINHGGASASTQHLHPSLRWLFGVAAVV-- 159
Query: 221 TRLSLLLKFQMKLRDIS-SVIEVLASSFKDDLSAQVHDLHHFQESILKTKQHL 272
T + +L + L D+S S EV AS + ++ ++ H +E +++ +HL
Sbjct: 160 TDVGQILLIDLCLDDLSCSQNEVEASDL-EVITGIPAEVPHIRERVMREGRHL 211
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 973 949 0.00094 122 3 11 22 0.40 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 634 (67 KB)
Total size of DFA: 481 KB (2224 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 91.20u 0.09s 91.29t Elapsed: 00:00:04
Total cpu time: 91.21u 0.09s 91.30t Elapsed: 00:00:04
Start: Fri May 10 08:42:58 2013 End: Fri May 10 08:43:02 2013