Query 002061
Match_columns 973
No_of_seqs 950 out of 6217
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 10:42:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002061.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002061hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 6.1E-78 2.1E-82 744.3 35.1 561 26-593 7-746 (768)
2 3rgz_A Protein brassinosteroid 100.0 5E-61 1.7E-65 593.2 28.0 496 74-569 127-744 (768)
3 3t6q_A CD180 antigen; protein- 100.0 1.7E-57 5.7E-62 549.4 37.5 505 63-571 14-566 (606)
4 4eco_A Uncharacterized protein 100.0 7.1E-59 2.4E-63 560.8 24.1 490 29-567 28-602 (636)
5 4ecn_A Leucine-rich repeat pro 100.0 1.1E-57 3.7E-62 557.8 33.5 500 28-566 266-865 (876)
6 1ziw_A TOLL-like receptor 3; i 100.0 1.5E-56 5.1E-61 548.5 39.6 531 60-591 3-626 (680)
7 3j0a_A TOLL-like receptor 5; m 100.0 3.4E-55 1.2E-59 546.7 39.6 496 61-571 14-566 (844)
8 3vq2_A TLR4, TOLL-like recepto 100.0 2.6E-56 8.8E-61 539.0 28.5 502 59-571 5-564 (606)
9 1ziw_A TOLL-like receptor 3; i 100.0 1.6E-54 5.5E-59 530.5 38.2 497 73-570 49-627 (680)
10 3t6q_A CD180 antigen; protein- 100.0 2.1E-54 7.2E-59 522.3 34.0 508 77-591 16-564 (606)
11 3vq2_A TLR4, TOLL-like recepto 100.0 1.6E-53 5.4E-58 514.6 27.1 501 76-592 14-563 (606)
12 2z63_A TOLL-like receptor 4, v 100.0 2.3E-51 7.8E-56 492.2 32.1 486 72-592 27-561 (570)
13 2z81_A CD282 antigen, TOLL-lik 100.0 9.6E-52 3.3E-56 493.0 23.3 485 60-570 3-515 (549)
14 3j0a_A TOLL-like receptor 5; m 100.0 1.6E-50 5.4E-55 504.7 33.4 459 73-546 48-564 (844)
15 4gt4_A Tyrosine-protein kinase 100.0 2.5E-51 8.6E-56 444.3 16.6 261 676-955 26-306 (308)
16 4aoj_A High affinity nerve gro 100.0 3.2E-51 1.1E-55 447.7 17.0 262 676-956 41-320 (329)
17 4asz_A BDNF/NT-3 growth factor 100.0 1.3E-51 4.5E-56 444.5 13.5 261 676-955 13-289 (299)
18 3omv_A RAF proto-oncogene seri 100.0 2.4E-50 8.4E-55 434.2 20.3 260 676-957 36-302 (307)
19 4b9d_A Serine/threonine-protei 100.0 1.9E-50 6.7E-55 440.8 17.2 251 675-949 23-277 (350)
20 4fih_A Serine/threonine-protei 100.0 6.5E-50 2.2E-54 435.9 20.4 249 676-949 74-324 (346)
21 4aw0_A HPDK1, 3-phosphoinositi 100.0 4.4E-50 1.5E-54 430.6 18.4 247 676-947 32-283 (311)
22 2z7x_B TOLL-like receptor 1, v 100.0 1.6E-49 5.4E-54 470.3 25.1 457 76-571 3-487 (520)
23 4g3f_A NF-kappa-beta-inducing 100.0 2.1E-49 7.1E-54 430.8 19.3 253 675-952 57-313 (336)
24 3fpq_A Serine/threonine-protei 100.0 5.1E-49 1.7E-53 420.8 20.4 244 679-949 29-283 (290)
25 2z63_A TOLL-like receptor 4, v 100.0 4.1E-48 1.4E-52 464.0 30.6 476 78-591 12-535 (570)
26 3hyh_A Carbon catabolite-derep 100.0 9.3E-49 3.2E-53 414.9 20.7 248 674-950 11-264 (275)
27 4fie_A Serine/threonine-protei 100.0 9.5E-49 3.2E-53 437.3 20.9 249 676-949 151-401 (423)
28 4eco_A Uncharacterized protein 100.0 6.1E-49 2.1E-53 474.1 20.2 453 97-590 81-603 (636)
29 4ase_A Vascular endothelial gr 100.0 2.2E-49 7.5E-54 436.6 14.0 262 676-955 64-347 (353)
30 4g8a_A TOLL-like receptor 4; l 100.0 3.4E-47 1.2E-51 462.3 34.7 496 45-571 8-586 (635)
31 4ecn_A Leucine-rich repeat pro 100.0 2.2E-47 7.5E-52 466.9 26.3 455 97-587 323-864 (876)
32 2z81_A CD282 antigen, TOLL-lik 100.0 2E-47 7E-52 455.6 24.9 472 61-546 12-514 (549)
33 3hmm_A TGF-beta receptor type- 100.0 2.8E-48 9.6E-53 421.9 15.1 265 677-955 4-297 (303)
34 3ubd_A Ribosomal protein S6 ki 100.0 2.7E-48 9.1E-53 417.1 14.6 247 676-949 24-282 (304)
35 4g31_A Eukaryotic translation 100.0 2E-47 6.7E-52 412.8 17.6 252 675-949 4-280 (299)
36 2z7x_B TOLL-like receptor 1, v 100.0 9.7E-47 3.3E-51 446.4 20.9 436 73-546 21-485 (520)
37 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1E-45 3.5E-50 441.2 29.0 457 76-571 34-516 (562)
38 4f9c_A Cell division cycle 7-r 100.0 1.4E-44 4.7E-49 401.5 19.8 199 675-884 20-250 (361)
39 4b99_A Mitogen-activated prote 100.0 2.1E-44 7.3E-49 404.1 21.4 264 676-950 54-346 (398)
40 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.4E-43 4.8E-48 422.8 26.6 435 73-547 52-515 (562)
41 4g8a_A TOLL-like receptor 4; l 100.0 2.2E-42 7.6E-47 419.9 34.1 502 77-592 35-585 (635)
42 3v5w_A G-protein coupled recep 100.0 1.5E-43 5E-48 412.3 21.7 251 674-950 187-451 (689)
43 1ogq_A PGIP-2, polygalacturona 100.0 8.2E-43 2.8E-47 383.0 21.7 291 28-324 3-302 (313)
44 1jl5_A Outer protein YOPM; leu 100.0 2.1E-42 7.1E-47 398.7 25.8 408 73-571 11-435 (454)
45 3v47_A TOLL-like receptor 5B a 100.0 2.4E-42 8.2E-47 401.6 26.3 376 144-570 30-413 (455)
46 3uto_A Twitchin; kinase, muscl 100.0 4.2E-43 1.4E-47 413.6 19.9 253 675-950 156-412 (573)
47 3v47_A TOLL-like receptor 5B a 100.0 2.6E-42 9E-47 401.3 25.5 369 193-591 30-412 (455)
48 1jl5_A Outer protein YOPM; leu 100.0 5.9E-42 2E-46 394.9 21.5 398 91-575 5-421 (454)
49 2qkw_B Protein kinase; three-h 100.0 5.6E-42 1.9E-46 378.8 19.6 279 672-956 35-316 (321)
50 3uim_A Brassinosteroid insensi 100.0 3.5E-41 1.2E-45 373.4 20.9 282 672-957 26-313 (326)
51 3fxz_A Serine/threonine-protei 100.0 1E-40 3.5E-45 363.9 23.4 251 675-950 19-271 (297)
52 2psq_A Fibroblast growth facto 100.0 5.4E-41 1.9E-45 377.4 19.3 261 675-954 80-363 (370)
53 3soc_A Activin receptor type-2 100.0 4.3E-41 1.5E-45 371.5 16.9 263 675-954 23-317 (322)
54 3fe3_A MAP/microtubule affinit 100.0 3.2E-40 1.1E-44 364.3 23.6 249 675-951 14-267 (328)
55 3s95_A LIMK-1, LIM domain kina 100.0 7.8E-41 2.7E-45 367.7 18.6 260 675-955 9-282 (310)
56 3bz5_A Internalin-J, INLJ; leu 100.0 8.2E-40 2.8E-44 377.3 27.6 365 84-548 29-393 (457)
57 3p86_A Serine/threonine-protei 100.0 3.7E-41 1.3E-45 369.2 15.4 264 675-962 36-305 (309)
58 3zgw_A Maternal embryonic leuc 100.0 4.2E-40 1.4E-44 365.2 23.4 253 673-951 7-263 (347)
59 3tki_A Serine/threonine-protei 100.0 2.2E-40 7.6E-45 365.5 18.6 255 675-951 6-264 (323)
60 4eqm_A Protein kinase; transfe 100.0 9.1E-40 3.1E-44 355.9 22.5 261 675-957 10-277 (294)
61 3kul_A Ephrin type-A receptor 100.0 1.1E-40 3.8E-45 368.4 15.4 261 675-958 48-316 (325)
62 1o6l_A RAC-beta serine/threoni 100.0 1.3E-39 4.4E-44 360.3 23.7 249 675-950 4-262 (337)
63 4euu_A Serine/threonine-protei 100.0 1.9E-39 6.5E-44 358.1 25.1 272 676-955 9-309 (319)
64 3cbl_A C-FES, proto-oncogene t 100.0 5.7E-41 2E-45 378.7 12.7 257 675-954 113-373 (377)
65 1tki_A Titin; serine kinase, m 100.0 4.1E-40 1.4E-44 362.8 18.9 254 675-951 4-260 (321)
66 2yab_A Death-associated protei 100.0 8.8E-40 3E-44 365.0 21.3 253 675-951 11-275 (361)
67 2nru_A Interleukin-1 receptor- 100.0 3.1E-39 1.1E-43 354.5 25.0 264 681-954 36-305 (307)
68 3p1a_A MYT1 kinase, membrane-a 100.0 1.2E-39 4.1E-44 358.1 21.5 262 659-950 40-306 (311)
69 3l9p_A Anaplastic lymphoma kin 100.0 1.6E-40 5.3E-45 373.5 14.0 262 674-954 69-344 (367)
70 1o6v_A Internalin A; bacterial 100.0 2.2E-38 7.6E-43 368.5 32.6 345 95-494 44-388 (466)
71 3bz5_A Internalin-J, INLJ; leu 100.0 2.6E-39 8.8E-44 373.2 24.4 369 107-575 28-397 (457)
72 3c0i_A Peripheral plasma membr 100.0 9.2E-40 3.1E-44 365.0 19.9 255 675-949 23-287 (351)
73 3poz_A Epidermal growth factor 100.0 1.9E-40 6.5E-45 367.2 14.1 256 675-954 14-277 (327)
74 1csn_A Casein kinase-1; phosph 100.0 1.5E-39 5.2E-44 355.4 20.5 265 675-956 9-284 (298)
75 3vhe_A Vascular endothelial gr 100.0 2.5E-40 8.5E-45 371.9 14.4 262 675-954 21-354 (359)
76 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.1E-39 3.7E-44 350.6 18.6 258 675-957 7-266 (268)
77 3txo_A PKC-L, NPKC-ETA, protei 100.0 9.8E-40 3.4E-44 363.7 18.8 251 673-950 20-282 (353)
78 4hcu_A Tyrosine-protein kinase 100.0 5.4E-40 1.9E-44 353.1 15.7 254 676-954 10-265 (269)
79 3soa_A Calcium/calmodulin-depe 100.0 2.8E-39 9.5E-44 370.4 22.3 255 673-950 8-269 (444)
80 4dc2_A Protein kinase C IOTA t 100.0 2.6E-39 9.1E-44 364.1 21.7 254 675-950 51-320 (396)
81 2izr_A Casein kinase I isoform 100.0 1.5E-39 5.1E-44 360.7 19.4 260 676-953 9-279 (330)
82 3ugc_A Tyrosine-protein kinase 100.0 1.1E-40 3.7E-45 363.9 9.9 263 675-954 9-290 (295)
83 1fot_A TPK1 delta, CAMP-depend 100.0 5E-39 1.7E-43 353.0 23.0 246 675-950 5-260 (318)
84 2y0a_A Death-associated protei 100.0 2.7E-39 9.2E-44 357.5 20.9 253 675-951 10-274 (326)
85 4fr4_A YANK1, serine/threonine 100.0 3.4E-39 1.2E-43 362.1 21.9 251 674-949 13-272 (384)
86 2pmi_A Negative RE, cyclin-dep 100.0 3.9E-39 1.3E-43 355.0 21.8 274 675-956 4-303 (317)
87 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.1E-39 3.7E-44 360.4 17.4 250 673-951 6-261 (336)
88 1luf_A Muscle-specific tyrosin 100.0 7.1E-40 2.4E-44 365.8 15.9 264 675-957 46-337 (343)
89 2qol_A Ephrin receptor; recept 100.0 5.1E-40 1.7E-44 369.7 14.8 257 675-954 44-308 (373)
90 3lb7_A RAF proto-oncogene seri 100.0 2E-39 6.9E-44 355.2 19.0 261 675-957 35-302 (307)
91 3o0g_A Cell division protein k 100.0 3.3E-39 1.1E-43 351.5 20.5 265 676-950 2-284 (292)
92 2c30_A Serine/threonine-protei 100.0 4.4E-39 1.5E-43 354.9 21.8 249 678-951 47-297 (321)
93 2bdw_A Hypothetical protein K1 100.0 2.5E-39 8.7E-44 362.5 20.1 253 673-949 26-285 (362)
94 1o6v_A Internalin A; bacterial 100.0 5.1E-38 1.8E-42 365.5 31.8 357 106-543 33-389 (466)
95 2ivs_A Proto-oncogene tyrosine 100.0 9.5E-40 3.3E-44 359.9 16.3 261 675-954 22-310 (314)
96 3kex_A Receptor tyrosine-prote 100.0 3.1E-40 1E-44 365.3 12.2 256 676-955 13-276 (325)
97 3tt0_A Basic fibroblast growth 100.0 1.6E-39 5.6E-44 367.6 18.4 262 675-955 68-352 (382)
98 4aw2_A Serine/threonine-protei 100.0 5.9E-40 2E-44 374.4 14.5 256 675-950 73-340 (437)
99 3qd2_B Eukaryotic translation 100.0 2.3E-39 7.7E-44 359.9 18.8 254 673-949 3-326 (332)
100 3niz_A Rhodanese family protei 100.0 4.8E-39 1.6E-43 353.1 21.0 264 673-949 18-301 (311)
101 3qup_A Tyrosine-protein kinase 100.0 1.4E-39 4.8E-44 360.0 16.7 261 675-954 22-297 (323)
102 2w4o_A Calcium/calmodulin-depe 100.0 1.3E-39 4.5E-44 363.3 16.4 254 675-951 52-308 (349)
103 1rjb_A FL cytokine receptor; k 100.0 1.2E-39 4.1E-44 364.0 16.0 265 675-957 44-336 (344)
104 1xjd_A Protein kinase C, theta 100.0 2.5E-39 8.7E-44 358.9 18.5 250 673-949 14-270 (345)
105 1rdq_E PKA C-alpha, CAMP-depen 100.0 6.7E-39 2.3E-43 356.8 21.6 248 674-951 39-296 (350)
106 1t46_A HOMO sapiens V-KIT hard 100.0 1.5E-39 5.2E-44 358.1 16.1 262 675-954 22-306 (313)
107 3q4u_A Activin receptor type-1 100.0 7.1E-39 2.4E-43 350.6 21.3 265 675-953 7-300 (301)
108 3a8x_A Protein kinase C IOTA t 100.0 7.3E-39 2.5E-43 356.0 21.6 254 675-950 8-277 (345)
109 2i1m_A Macrophage colony-stimu 100.0 1.2E-39 4.1E-44 362.2 15.1 262 675-954 45-325 (333)
110 1opk_A P150, C-ABL, proto-onco 100.0 2E-39 6.8E-44 378.7 17.7 258 675-955 219-478 (495)
111 2zv2_A Calcium/calmodulin-depe 100.0 1.5E-39 5.1E-44 355.3 15.5 250 674-949 11-293 (298)
112 1k9a_A Carboxyl-terminal SRC k 100.0 4.2E-39 1.5E-43 371.8 19.8 251 675-954 192-444 (450)
113 3v8s_A RHO-associated protein 100.0 4E-39 1.4E-43 364.8 18.9 255 674-951 67-332 (410)
114 2i0e_A Protein kinase C-beta I 100.0 7.8E-39 2.7E-43 356.1 20.8 251 673-950 17-278 (353)
115 3uc3_A Serine/threonine-protei 100.0 2.7E-39 9.1E-44 362.4 17.0 255 675-951 19-277 (361)
116 2v62_A Serine/threonine-protei 100.0 8.5E-39 2.9E-43 356.8 20.9 278 675-967 36-340 (345)
117 4f0f_A Serine/threonine-protei 100.0 6.9E-39 2.3E-43 348.1 19.6 253 674-953 17-287 (287)
118 1kob_A Twitchin; kinase, intra 100.0 5.6E-39 1.9E-43 361.7 19.3 253 675-950 50-306 (387)
119 2eva_A TAK1 kinase - TAB1 chim 100.0 3.4E-39 1.2E-43 353.7 16.9 256 675-955 7-263 (307)
120 3oz6_A Mitogen-activated prote 100.0 1.5E-38 5.2E-43 360.9 22.6 273 670-954 3-336 (388)
121 3gni_B Strad alpha; kinase fol 100.0 9.9E-39 3.4E-43 362.6 21.0 273 675-954 24-341 (389)
122 2wqm_A Serine/threonine-protei 100.0 3.5E-39 1.2E-43 354.6 16.6 273 670-961 26-303 (310)
123 3gen_A Tyrosine-protein kinase 100.0 2.8E-39 9.6E-44 350.4 15.5 255 675-954 23-279 (283)
124 3lzb_A Epidermal growth factor 100.0 3.1E-39 1.1E-43 357.1 16.1 257 675-955 14-278 (327)
125 2id5_A Lingo-1, leucine rich r 100.0 1.8E-38 6.1E-43 371.1 23.3 347 195-592 13-361 (477)
126 3dtc_A Mitogen-activated prote 100.0 4.3E-39 1.5E-43 346.5 16.3 249 675-953 6-271 (271)
127 1qcf_A Haematopoetic cell kina 100.0 2.8E-39 9.4E-44 374.0 15.8 259 675-958 187-447 (454)
128 3kn6_A Ribosomal protein S6 ki 100.0 1.3E-38 4.4E-43 351.7 19.9 252 681-951 16-273 (325)
129 1ob3_A PFPK5, cell division co 100.0 7.7E-39 2.6E-43 347.8 17.7 262 676-950 2-282 (288)
130 2pvf_A Fibroblast growth facto 100.0 5.5E-39 1.9E-43 356.8 16.9 262 675-955 34-318 (334)
131 3kfa_A Tyrosine-protein kinase 100.0 4.3E-39 1.5E-43 349.9 15.6 257 674-953 11-269 (288)
132 3g33_A Cell division protein k 100.0 1.9E-38 6.5E-43 348.3 20.6 267 672-950 5-298 (308)
133 3fdn_A Serine/threonine-protei 100.0 2.5E-38 8.6E-43 342.1 21.0 249 674-951 7-260 (279)
134 2yex_A Serine/threonine-protei 100.0 1.1E-38 3.6E-43 344.5 17.9 255 674-950 5-263 (276)
135 3kk8_A Calcium/calmodulin depe 100.0 2.9E-38 9.9E-43 342.6 21.4 252 675-950 5-263 (284)
136 4eut_A Serine/threonine-protei 100.0 1.3E-38 4.5E-43 361.9 19.6 271 676-954 9-308 (396)
137 2acx_A G protein-coupled recep 100.0 1.1E-38 3.7E-43 372.1 19.2 254 675-950 183-446 (576)
138 2vd5_A DMPK protein; serine/th 100.0 2.1E-38 7.1E-43 359.2 21.0 257 674-951 59-330 (412)
139 2buj_A Serine/threonine-protei 100.0 7.3E-39 2.5E-43 353.3 16.8 267 675-959 28-310 (317)
140 1mp8_A Focal adhesion kinase 1 100.0 5.2E-39 1.8E-43 347.8 15.3 255 675-954 14-275 (281)
141 2x4f_A Myosin light chain kina 100.0 1.4E-38 4.7E-43 357.8 19.3 248 680-950 93-344 (373)
142 3f3z_A Calcium/calmodulin-depe 100.0 3.1E-38 1.1E-42 341.0 21.1 250 675-949 8-262 (277)
143 3ork_A Serine/threonine protei 100.0 1.3E-38 4.5E-43 349.9 18.2 254 675-949 11-274 (311)
144 4e5w_A Tyrosine-protein kinase 100.0 2.6E-39 8.8E-44 354.3 12.3 262 675-953 20-300 (302)
145 4fvq_A Tyrosine-protein kinase 100.0 4.6E-39 1.6E-43 349.9 14.2 257 675-961 7-281 (289)
146 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 7.7E-39 2.6E-43 369.8 16.7 261 675-960 183-445 (452)
147 1u5q_A Serine/threonine protei 100.0 1.2E-38 4.1E-43 354.9 17.6 248 676-952 54-309 (348)
148 3kmu_A ILK, integrin-linked ki 100.0 9E-39 3.1E-43 344.0 16.0 251 675-955 9-270 (271)
149 2a2a_A Death-associated protei 100.0 3E-38 1E-42 348.8 20.6 253 674-950 10-274 (321)
150 2y94_A 5'-AMP-activated protei 100.0 2.1E-38 7.2E-43 365.3 20.2 248 674-949 14-267 (476)
151 1p4o_A Insulin-like growth fac 100.0 6.3E-39 2.2E-43 354.6 15.2 264 673-955 22-299 (322)
152 3is5_A Calcium-dependent prote 100.0 3.3E-38 1.1E-42 342.2 20.5 254 674-949 20-279 (285)
153 3og7_A AKAP9-BRAF fusion prote 100.0 8.2E-39 2.8E-43 347.7 15.8 260 674-955 22-288 (289)
154 3hko_A Calcium/calmodulin-depe 100.0 1.7E-38 5.9E-43 354.8 18.8 263 672-950 22-332 (345)
155 3op5_A Serine/threonine-protei 100.0 2.3E-38 7.8E-43 356.1 19.9 267 674-954 33-328 (364)
156 2eue_A Carbon catabolite derep 100.0 2.2E-38 7.4E-43 341.8 18.9 247 675-950 12-264 (275)
157 1nxk_A MAP kinase-activated pr 100.0 2.3E-38 7.8E-43 359.6 20.0 255 674-951 59-324 (400)
158 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.7E-38 1.3E-42 354.7 21.5 255 675-954 64-338 (365)
159 3llt_A Serine/threonine kinase 100.0 5.2E-38 1.8E-42 353.0 22.6 263 673-949 32-356 (360)
160 3mdy_A Bone morphogenetic prot 100.0 1E-37 3.5E-42 347.3 24.7 268 672-957 33-333 (337)
161 3uzp_A CKI-delta, CKID, casein 100.0 4.2E-38 1.4E-42 343.5 21.1 264 675-957 8-282 (296)
162 4agu_A Cyclin-dependent kinase 100.0 2.7E-38 9.3E-43 347.7 19.8 264 675-950 2-286 (311)
163 2id5_A Lingo-1, leucine rich r 100.0 5.2E-38 1.8E-42 367.2 23.2 350 170-571 13-362 (477)
164 3dls_A PAS domain-containing s 100.0 1.3E-38 4.5E-43 353.0 17.2 245 673-951 21-277 (335)
165 3dbq_A Dual specificity protei 100.0 8.7E-39 3E-43 356.4 15.6 251 676-951 9-276 (343)
166 3lxl_A Tyrosine-protein kinase 100.0 3.6E-39 1.2E-43 357.2 12.5 262 676-955 23-303 (327)
167 3a62_A Ribosomal protein S6 ki 100.0 4.2E-38 1.5E-42 348.0 21.0 250 675-951 16-279 (327)
168 4hgt_A Casein kinase I isoform 100.0 3.2E-38 1.1E-42 344.5 19.8 264 673-955 6-280 (296)
169 3cok_A Serine/threonine-protei 100.0 2.4E-38 8.3E-43 342.0 18.6 251 675-951 10-265 (278)
170 2zmd_A Dual specificity protei 100.0 1.5E-38 5.2E-43 359.9 17.7 251 676-951 56-323 (390)
171 2xir_A Vascular endothelial gr 100.0 4.2E-39 1.4E-43 355.0 12.7 263 675-955 26-310 (316)
172 3c4z_A Rhodopsin kinase; Ser/T 100.0 4E-38 1.4E-42 366.8 21.6 256 675-949 184-449 (543)
173 4ejn_A RAC-alpha serine/threon 100.0 1.6E-38 5.4E-43 367.2 17.9 249 675-950 147-406 (446)
174 3t9t_A Tyrosine-protein kinase 100.0 1.1E-38 3.7E-43 342.6 15.3 254 676-954 8-263 (267)
175 2a19_B Interferon-induced, dou 100.0 1.1E-38 3.7E-43 345.9 15.4 259 670-960 5-279 (284)
176 2qr7_A Ribosomal protein S6 ki 100.0 1.8E-38 6.1E-43 352.4 17.4 256 674-951 20-280 (342)
177 2ac3_A MAP kinase-interacting 100.0 2.5E-38 8.4E-43 348.9 18.5 261 675-951 11-298 (316)
178 3ttj_A Mitogen-activated prote 100.0 3.8E-38 1.3E-42 364.1 20.8 261 674-950 60-357 (464)
179 2h34_A Serine/threonine-protei 100.0 1.7E-37 5.7E-42 340.7 24.7 263 673-958 31-299 (309)
180 3com_A Serine/threonine-protei 100.0 7.1E-38 2.4E-42 344.8 21.8 256 672-950 25-280 (314)
181 2r5t_A Serine/threonine-protei 100.0 2.2E-38 7.4E-43 355.1 17.6 244 674-944 36-285 (373)
182 3brb_A Proto-oncogene tyrosine 100.0 2.2E-38 7.5E-43 348.8 17.3 261 675-954 33-307 (313)
183 2yfx_A Tyrosine-protein kinase 100.0 1.1E-38 3.7E-43 353.4 14.6 265 672-955 26-304 (327)
184 1mqb_A Ephrin type-A receptor 100.0 2.6E-38 9E-43 350.8 17.4 257 676-955 44-309 (333)
185 2w5a_A Serine/threonine-protei 100.0 7.7E-39 2.6E-43 346.2 12.3 260 675-956 5-275 (279)
186 3bhy_A Death-associated protei 100.0 8.3E-38 2.8E-42 338.8 20.0 250 676-949 5-266 (283)
187 3mtl_A Cell division protein k 100.0 4.3E-38 1.5E-42 347.8 18.0 264 676-951 2-284 (324)
188 1fvr_A Tyrosine-protein kinase 100.0 2.6E-38 8.8E-43 350.4 16.1 259 675-955 24-300 (327)
189 3pls_A Macrophage-stimulating 100.0 4E-38 1.4E-42 344.1 17.3 257 677-955 22-287 (298)
190 1byg_A CSK, protein (C-termina 100.0 1.5E-38 5.1E-43 343.7 13.8 251 675-954 20-272 (278)
191 1u59_A Tyrosine-protein kinase 100.0 3.1E-38 1.1E-42 342.9 16.3 255 676-954 9-271 (287)
192 2vgo_A Serine/threonine-protei 100.0 1.7E-37 6E-42 336.4 21.9 247 675-950 13-264 (284)
193 3cc6_A Protein tyrosine kinase 100.0 2.7E-38 9.4E-43 342.2 15.5 255 675-954 11-272 (281)
194 2wtk_C Serine/threonine-protei 100.0 3.4E-37 1.2E-41 337.9 24.2 253 674-950 3-265 (305)
195 1wak_A Serine/threonine-protei 100.0 7.7E-38 2.6E-42 356.8 19.7 281 658-950 19-393 (397)
196 1t4h_A Serine/threonine-protei 100.0 1.2E-37 4.3E-42 338.7 20.3 247 677-950 27-284 (290)
197 1cm8_A Phosphorylated MAP kina 100.0 1.1E-37 3.6E-42 350.2 20.3 257 675-949 24-308 (367)
198 3mwu_A Calmodulin-domain prote 100.0 1.5E-37 5.3E-42 363.1 22.5 253 673-950 19-278 (486)
199 1xbb_A Tyrosine-protein kinase 100.0 4.7E-38 1.6E-42 342.1 16.9 253 676-953 16-277 (291)
200 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.4E-38 8.1E-43 350.7 14.6 267 672-951 30-321 (329)
201 2jii_A Serine/threonine-protei 100.0 4.9E-38 1.7E-42 351.8 17.3 265 675-955 41-336 (352)
202 4aaa_A Cyclin-dependent kinase 100.0 3.1E-38 1.1E-42 350.3 15.2 268 670-949 19-307 (331)
203 3lxp_A Non-receptor tyrosine-p 100.0 3.2E-39 1.1E-43 355.9 7.1 268 678-955 33-310 (318)
204 3gxj_A TGF-beta receptor type- 100.0 2E-39 6.9E-44 355.3 5.3 267 676-957 3-299 (303)
205 3sv0_A Casein kinase I-like; t 100.0 2.9E-37 9.9E-42 356.5 23.5 262 675-953 6-276 (483)
206 3a7i_A MST3 kinase, serine/thr 100.0 8.7E-38 3E-42 342.2 18.1 250 675-951 21-273 (303)
207 2rku_A Serine/threonine-protei 100.0 1.5E-37 5.1E-42 338.8 19.8 252 672-950 11-267 (294)
208 3rp9_A Mitogen-activated prote 100.0 4.1E-38 1.4E-42 365.4 16.4 193 676-877 53-280 (458)
209 3c1x_A Hepatocyte growth facto 100.0 2E-38 6.7E-43 356.3 13.2 256 677-955 90-355 (373)
210 1x8b_A WEE1HU, WEE1-like prote 100.0 7.5E-38 2.6E-42 340.1 17.1 249 673-950 8-281 (289)
211 2y7j_A Phosphorylase B kinase 100.0 2.6E-37 8.8E-42 347.0 22.0 254 673-950 91-361 (365)
212 2jam_A Calcium/calmodulin-depe 100.0 1.4E-37 4.7E-42 340.8 19.1 251 675-950 8-263 (304)
213 3i6u_A CDS1, serine/threonine- 100.0 6.6E-38 2.3E-42 358.3 17.2 256 672-951 131-402 (419)
214 1qpc_A LCK kinase; alpha beta 100.0 5.4E-38 1.9E-42 339.5 15.5 255 675-954 12-268 (279)
215 2ozo_A Tyrosine-protein kinase 100.0 4.4E-38 1.5E-42 375.9 16.2 258 683-964 343-607 (613)
216 3lij_A Calcium/calmodulin depe 100.0 2E-37 6.7E-42 362.8 21.4 251 674-949 35-292 (494)
217 1b6c_B TGF-B superfamily recep 100.0 3.4E-37 1.2E-41 343.8 22.3 272 670-956 36-337 (342)
218 3eqc_A Dual specificity mitoge 100.0 4.3E-38 1.5E-42 353.6 14.9 265 674-951 31-327 (360)
219 3kvw_A DYRK2, dual specificity 100.0 1.9E-37 6.4E-42 355.5 20.4 198 675-884 96-302 (429)
220 3fme_A Dual specificity mitoge 100.0 4.1E-38 1.4E-42 342.6 14.2 253 675-949 6-267 (290)
221 3f66_A Hepatocyte growth facto 100.0 5.4E-38 1.8E-42 343.0 15.2 258 675-955 24-291 (298)
222 3byv_A Rhoptry kinase; malaria 100.0 8.9E-39 3E-43 361.1 9.2 244 675-949 72-360 (377)
223 2h8h_A Proto-oncogene tyrosine 100.0 4.1E-38 1.4E-42 371.0 15.0 260 675-959 266-527 (535)
224 3q5i_A Protein kinase; CDPK, m 100.0 3.1E-37 1E-41 362.1 22.3 253 674-951 34-304 (504)
225 2owb_A Serine/threonine-protei 100.0 1.8E-37 6.1E-42 344.6 19.2 251 672-949 37-292 (335)
226 3eb0_A Putative uncharacterize 100.0 1.2E-37 4E-42 352.8 18.0 264 674-949 5-322 (383)
227 3lm5_A Serine/threonine-protei 100.0 1.2E-37 4E-42 344.8 17.6 258 672-951 24-290 (327)
228 3n9x_A Phosphotransferase; mal 100.0 3.1E-37 1E-41 354.5 21.6 198 676-882 26-253 (432)
229 3ll6_A Cyclin G-associated kin 100.0 6.3E-38 2.1E-42 349.0 15.4 255 676-955 28-308 (337)
230 2xrw_A Mitogen-activated prote 100.0 4.4E-37 1.5E-41 346.2 22.4 261 674-950 23-320 (371)
231 2clq_A Mitogen-activated prote 100.0 5.7E-37 1.9E-41 334.4 22.5 254 677-951 23-281 (295)
232 3mi9_A Cell division protein k 100.0 2.8E-37 9.4E-42 345.7 20.6 267 675-951 16-314 (351)
233 2w1i_A JAK2; chromosomal rearr 100.0 9.9E-38 3.4E-42 345.4 16.7 263 675-954 40-321 (326)
234 2h6d_A 5'-AMP-activated protei 100.0 3.3E-37 1.1E-41 332.7 20.3 247 675-949 10-262 (276)
235 3nsz_A CK II alpha, casein kin 100.0 2.5E-37 8.5E-42 343.1 19.7 261 675-950 35-321 (330)
236 3nyv_A Calmodulin-domain prote 100.0 1.2E-37 4E-42 364.3 17.6 253 674-951 24-284 (484)
237 3g2f_A Bone morphogenetic prot 100.0 1E-37 3.6E-42 347.1 16.4 267 675-957 12-320 (336)
238 1vzo_A Ribosomal protein S6 ki 100.0 1.2E-37 4.1E-42 348.4 16.8 256 674-951 52-324 (355)
239 1ua2_A CAK, cell division prot 100.0 4E-37 1.4E-41 343.4 21.0 267 674-951 8-294 (346)
240 2r3i_A Cell division protein k 100.0 3.2E-37 1.1E-41 337.1 19.8 265 675-950 2-285 (299)
241 2j7t_A Serine/threonine-protei 100.0 1.3E-37 4.3E-42 340.8 16.5 256 672-950 15-277 (302)
242 2x7f_A TRAF2 and NCK-interacti 100.0 1.2E-37 4.1E-42 345.0 15.9 254 673-949 21-287 (326)
243 3q60_A ROP5B; pseudokinase, tr 100.0 6.1E-38 2.1E-42 353.6 13.7 253 676-949 62-353 (371)
244 3pfq_A PKC-B, PKC-beta, protei 100.0 3.8E-37 1.3E-41 371.1 21.4 250 673-949 338-598 (674)
245 1u46_A ACK-1, activated CDC42 100.0 7.3E-38 2.5E-42 340.7 13.5 260 675-957 17-286 (291)
246 2ycf_A Serine/threonine-protei 100.0 2.8E-37 9.5E-42 341.3 18.1 254 672-949 6-275 (322)
247 3o6n_A APL1; leucine-rich repe 100.0 1.4E-36 4.6E-41 345.3 24.1 348 50-470 3-352 (390)
248 3rgf_A Cyclin-dependent kinase 100.0 3.1E-37 1E-41 352.1 18.5 271 677-952 21-337 (405)
249 3o6n_A APL1; leucine-rich repe 100.0 1.7E-36 5.6E-41 344.6 24.4 335 192-592 44-379 (390)
250 3an0_A Dual specificity mitoge 100.0 9.6E-38 3.3E-42 347.9 13.9 253 675-949 50-311 (340)
251 3qyz_A Mitogen-activated prote 100.0 4.7E-37 1.6E-41 345.4 19.5 264 676-951 27-316 (364)
252 1phk_A Phosphorylase kinase; g 100.0 9.4E-37 3.2E-41 333.2 21.3 253 674-950 15-285 (298)
253 1j1b_A Glycogen synthase kinas 100.0 4.4E-37 1.5E-41 351.6 19.1 264 676-950 54-338 (420)
254 2fst_X Mitogen-activated prote 100.0 3E-37 1E-41 346.0 17.5 259 675-950 28-313 (367)
255 2vwi_A Serine/threonine-protei 100.0 6.7E-38 2.3E-42 343.2 11.7 264 675-949 14-288 (303)
256 4fl3_A Tyrosine-protein kinase 100.0 2.1E-37 7.1E-42 370.9 17.0 247 682-953 375-629 (635)
257 3e3p_A Protein kinase, putativ 100.0 8.2E-37 2.8E-41 343.3 20.6 272 672-950 19-316 (360)
258 2vx3_A Dual specificity tyrosi 100.0 2E-36 6.7E-41 342.5 23.6 205 670-884 48-261 (382)
259 1z57_A Dual specificity protei 100.0 1.8E-36 6.3E-41 337.4 21.9 263 673-949 11-329 (339)
260 3oja_B Anopheles plasmodium-re 100.0 2.6E-36 9E-41 361.8 24.3 335 192-592 50-385 (597)
261 3aln_A Dual specificity mitoge 100.0 5.9E-37 2E-41 339.5 16.6 257 675-949 21-286 (327)
262 4exu_A Mitogen-activated prote 100.0 1.3E-36 4.5E-41 342.4 19.6 259 675-951 41-326 (371)
263 1zy4_A Serine/threonine-protei 100.0 1.5E-36 5E-41 332.5 19.3 255 674-950 4-285 (303)
264 2wei_A Calmodulin-domain prote 100.0 1.9E-36 6.5E-41 328.8 19.8 253 672-949 18-277 (287)
265 2b9h_A MAP kinase FUS3, mitoge 100.0 1.6E-36 5.6E-41 339.9 19.1 264 675-950 10-307 (353)
266 2pml_X PFPK7, Ser/Thr protein 100.0 2.9E-37 1E-41 345.3 12.9 264 674-950 29-324 (348)
267 4e7w_A Glycogen synthase kinas 100.0 7.8E-37 2.7E-41 346.6 16.4 268 675-954 39-329 (394)
268 1blx_A Cyclin-dependent kinase 100.0 3.1E-36 1.1E-40 333.7 19.9 269 674-954 9-304 (326)
269 2i6l_A Mitogen-activated prote 100.0 2.1E-36 7.3E-41 334.0 18.2 263 675-949 10-306 (320)
270 3fhr_A MAP kinase-activated pr 100.0 1.4E-36 4.9E-41 337.1 16.6 258 673-951 25-290 (336)
271 3cek_A Dual specificity protei 100.0 1.2E-36 4.2E-41 334.7 15.8 252 675-951 27-295 (313)
272 2eu9_A Dual specificity protei 100.0 7.5E-36 2.6E-40 334.8 22.5 264 672-949 15-334 (355)
273 3pg1_A Mitogen-activated prote 100.0 1.9E-36 6.4E-41 340.6 17.1 265 673-951 19-319 (362)
274 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.1E-37 1E-41 340.6 9.8 257 675-957 32-304 (319)
275 1q8y_A SR protein kinase; tran 100.0 8.3E-36 2.8E-40 336.9 21.5 264 675-951 18-336 (373)
276 3oja_B Anopheles plasmodium-re 100.0 1.4E-35 4.7E-40 355.6 24.6 350 46-471 5-359 (597)
277 3coi_A Mitogen-activated prote 100.0 4.9E-36 1.7E-40 335.8 18.2 258 676-951 24-308 (353)
278 3a99_A Proto-oncogene serine/t 100.0 1E-36 3.5E-41 336.1 12.4 244 672-950 39-295 (320)
279 4fcg_A Uncharacterized protein 100.0 4.6E-36 1.6E-40 331.2 17.5 280 27-326 23-314 (328)
280 2j0j_A Focal adhesion kinase 1 100.0 2E-36 6.7E-41 363.8 15.3 254 675-953 389-649 (656)
281 2iwi_A Serine/threonine-protei 100.0 3.3E-36 1.1E-40 331.2 13.8 244 673-951 28-286 (312)
282 2dyl_A Dual specificity mitoge 100.0 6.6E-36 2.3E-40 329.8 15.5 252 674-949 23-284 (318)
283 2rio_A Serine/threonine-protei 100.0 1.1E-35 3.6E-40 341.6 15.8 256 677-950 16-297 (434)
284 3qa8_A MGC80376 protein; kinas 100.0 4.1E-36 1.4E-40 353.2 10.4 263 672-946 10-295 (676)
285 4fmz_A Internalin; leucine ric 100.0 4.4E-34 1.5E-38 319.3 24.9 304 192-542 43-346 (347)
286 3p23_A Serine/threonine-protei 100.0 1.9E-35 6.4E-40 338.4 14.0 250 676-949 24-284 (432)
287 4fmz_A Internalin; leucine ric 100.0 1.1E-33 3.9E-38 315.9 27.2 307 117-518 40-346 (347)
288 3uqc_A Probable conserved tran 100.0 8.1E-35 2.8E-39 314.7 16.7 230 675-956 30-266 (286)
289 3m2w_A MAP kinase-activated pr 100.0 3.8E-34 1.3E-38 312.5 19.2 234 674-951 15-259 (299)
290 2pzi_A Probable serine/threoni 100.0 2.2E-34 7.4E-39 349.9 16.5 238 674-952 78-325 (681)
291 2ft3_A Biglycan; proteoglycan, 100.0 9.8E-33 3.4E-37 306.0 24.3 288 194-540 34-331 (332)
292 3dzo_A Rhoptry kinase domain; 100.0 2.8E-34 9.5E-39 327.6 11.7 243 676-949 78-364 (413)
293 2ft3_A Biglycan; proteoglycan, 100.0 1.8E-32 6.2E-37 303.9 23.9 287 218-563 34-331 (332)
294 1xku_A Decorin; proteoglycan, 100.0 2.8E-32 9.6E-37 302.2 23.9 274 218-540 53-330 (330)
295 1xku_A Decorin; proteoglycan, 100.0 4.7E-32 1.6E-36 300.3 23.0 288 218-563 32-330 (330)
296 2vuw_A Serine/threonine-protei 100.0 6.5E-34 2.2E-38 316.2 6.7 243 675-949 19-332 (336)
297 1ogq_A PGIP-2, polygalacturona 100.0 1E-32 3.5E-37 302.6 15.5 250 217-516 50-302 (313)
298 1z7x_W Ribonuclease inhibitor; 100.0 2.3E-36 7.9E-41 351.8 -15.8 159 121-279 3-184 (461)
299 1z7x_W Ribonuclease inhibitor; 100.0 2.1E-35 7.2E-40 343.8 -9.5 359 74-470 4-411 (461)
300 3ogk_B Coronatine-insensitive 100.0 3.9E-33 1.3E-37 335.5 -5.0 377 142-544 110-528 (592)
301 2z80_A TOLL-like receptor 2, v 100.0 1.3E-30 4.3E-35 291.7 15.0 286 52-354 22-318 (353)
302 2z66_A Variable lymphocyte rec 100.0 2E-30 6.8E-35 284.0 15.7 252 59-326 5-261 (306)
303 4fcg_A Uncharacterized protein 100.0 2.9E-31 9.9E-36 292.8 8.4 288 31-350 12-314 (328)
304 3ogk_B Coronatine-insensitive 100.0 3E-33 1E-37 336.5 -8.7 451 60-540 41-549 (592)
305 2z66_A Variable lymphocyte rec 100.0 7.4E-30 2.5E-34 279.5 15.5 184 385-569 78-265 (306)
306 2z80_A TOLL-like receptor 2, v 100.0 1.3E-29 4.3E-34 283.6 13.7 276 246-569 36-318 (353)
307 3zyj_A Leucine-rich repeat-con 100.0 1.5E-28 5E-33 283.5 20.8 233 314-572 65-299 (440)
308 3zyi_A Leucine-rich repeat-con 100.0 1.8E-28 6.1E-33 283.8 20.6 252 267-571 56-309 (452)
309 3g06_A SSPH2 (leucine-rich rep 100.0 8E-29 2.7E-33 293.7 16.6 291 45-428 7-303 (622)
310 1wwl_A Monocyte differentiatio 100.0 1.2E-29 4.1E-34 278.2 6.5 247 94-351 40-310 (312)
311 1ozn_A Reticulon 4 receptor; N 100.0 7.2E-28 2.5E-32 260.7 19.2 236 265-525 32-268 (285)
312 1ozn_A Reticulon 4 receptor; N 100.0 5.8E-28 2E-32 261.5 17.0 162 382-543 77-239 (285)
313 3zyi_A Leucine-rich repeat-con 100.0 1.3E-27 4.3E-32 276.7 20.4 249 242-543 55-304 (452)
314 1wwl_A Monocyte differentiatio 99.9 3.8E-29 1.3E-33 274.2 6.1 205 141-350 40-266 (312)
315 3zyj_A Leucine-rich repeat-con 99.9 2.6E-27 8.9E-32 273.0 21.1 247 195-494 45-292 (440)
316 3g06_A SSPH2 (leucine-rich rep 99.9 6.9E-27 2.3E-31 277.1 24.7 267 194-552 41-307 (622)
317 3o53_A Protein LRIM1, AGAP0063 99.9 1.1E-28 3.8E-33 271.2 6.4 267 195-523 12-281 (317)
318 3o53_A Protein LRIM1, AGAP0063 99.9 2.7E-28 9.4E-33 268.1 7.2 259 74-346 11-271 (317)
319 2p1m_B Transport inhibitor res 99.9 3.9E-30 1.3E-34 309.5 -11.5 430 60-542 34-519 (594)
320 3oja_A Leucine-rich immune mol 99.9 8.2E-28 2.8E-32 279.7 6.0 233 290-560 35-270 (487)
321 4azs_A Methyltransferase WBDD; 99.9 6.7E-28 2.3E-32 284.1 5.1 185 683-881 241-438 (569)
322 2o6q_A Variable lymphocyte rec 99.9 8.6E-26 2.9E-30 242.1 20.2 215 59-302 3-218 (270)
323 3oja_A Leucine-rich immune mol 99.9 4.6E-27 1.6E-31 273.3 10.0 239 93-345 30-270 (487)
324 2p1m_B Transport inhibitor res 99.9 2.8E-29 9.5E-34 302.0 -10.3 414 100-566 46-520 (594)
325 1p9a_G Platelet glycoprotein I 99.9 2.3E-25 7.8E-30 240.8 18.4 207 333-570 6-213 (290)
326 2o6q_A Variable lymphocyte rec 99.9 5.4E-25 1.9E-29 235.9 20.9 206 338-570 17-223 (270)
327 2z62_A TOLL-like receptor 4, v 99.9 2.2E-25 7.6E-30 239.9 17.5 190 380-570 47-242 (276)
328 2z62_A TOLL-like receptor 4, v 99.9 7.3E-25 2.5E-29 235.8 19.1 209 313-546 28-241 (276)
329 3rfs_A Internalin B, repeat mo 99.9 2.8E-25 9.6E-30 238.3 14.3 227 313-575 19-245 (272)
330 3rfs_A Internalin B, repeat mo 99.9 1.5E-24 5.2E-29 232.6 14.5 226 96-358 18-243 (272)
331 2ast_B S-phase kinase-associat 99.9 8E-26 2.7E-30 251.0 3.1 234 60-299 36-282 (336)
332 3en9_A Glycoprotease, O-sialog 99.9 7.3E-25 2.5E-29 256.8 8.8 184 679-882 339-539 (540)
333 3goz_A Leucine-rich repeat-con 99.9 6.8E-25 2.3E-29 245.8 6.9 260 78-358 3-305 (362)
334 1p9a_G Platelet glycoprotein I 99.9 2.7E-23 9.3E-28 224.5 19.2 201 117-324 6-206 (290)
335 3m19_A Variable lymphocyte rec 99.9 4.7E-23 1.6E-27 218.2 19.3 158 410-567 36-194 (251)
336 3m19_A Variable lymphocyte rec 99.9 7.6E-23 2.6E-27 216.5 17.9 178 367-546 19-196 (251)
337 2ast_B S-phase kinase-associat 99.9 2.5E-24 8.5E-29 239.0 6.4 252 98-357 48-313 (336)
338 3goz_A Leucine-rich repeat-con 99.9 2.9E-24 1E-28 240.6 4.9 232 73-304 22-299 (362)
339 2xwt_C Thyrotropin receptor; s 99.9 1.2E-22 4E-27 213.5 15.1 195 98-323 32-236 (239)
340 2ca6_A RAN GTPase-activating p 99.9 1.1E-24 3.7E-29 246.7 -0.6 190 165-354 91-320 (386)
341 4glp_A Monocyte differentiatio 99.9 2.8E-23 9.7E-28 227.3 9.7 225 96-327 63-308 (310)
342 2xwt_C Thyrotropin receptor; s 99.9 1.4E-22 4.9E-27 212.8 14.3 196 266-491 32-236 (239)
343 4glp_A Monocyte differentiatio 99.9 2.3E-22 8E-27 220.0 16.0 206 242-494 92-307 (310)
344 2ca6_A RAN GTPase-activating p 99.9 1.7E-24 5.7E-29 245.2 -2.3 221 112-350 23-287 (386)
345 1h6u_A Internalin H; cell adhe 99.9 5E-22 1.7E-26 216.8 17.0 194 93-302 37-230 (308)
346 1h6u_A Internalin H; cell adhe 99.9 2.6E-22 8.9E-27 219.1 14.5 213 97-327 19-231 (308)
347 3cvr_A Invasion plasmid antige 99.9 3.7E-23 1.3E-27 242.0 8.1 218 47-312 30-253 (571)
348 4ay9_X Follicle-stimulating ho 99.9 7.6E-21 2.6E-25 211.7 18.1 217 100-344 12-233 (350)
349 4ay9_X Follicle-stimulating ho 99.8 1.5E-20 5E-25 209.4 20.0 242 196-492 12-257 (350)
350 1zar_A RIO2 kinase; serine kin 99.8 8.5E-22 2.9E-26 211.3 7.8 142 677-854 91-252 (282)
351 2o6s_A Variable lymphocyte rec 99.8 1E-20 3.4E-25 194.0 14.7 179 388-575 10-188 (208)
352 2o6s_A Variable lymphocyte rec 99.8 1.4E-20 4.8E-25 193.0 13.4 162 385-553 28-189 (208)
353 2v70_A SLIT-2, SLIT homolog 2 99.8 7.4E-21 2.5E-25 196.5 11.2 158 434-592 33-194 (220)
354 2xot_A Amphoterin-induced prot 99.8 1.2E-20 4E-25 211.0 13.5 181 387-570 20-207 (361)
355 4b8c_D Glucose-repressible alc 99.8 1.2E-21 4.3E-26 238.0 5.6 233 29-275 130-369 (727)
356 2v9t_B SLIT homolog 2 protein 99.8 1.4E-20 4.9E-25 194.4 11.8 140 433-572 32-172 (220)
357 3cvr_A Invasion plasmid antige 99.8 1.8E-20 6.1E-25 219.3 13.9 189 122-338 60-255 (571)
358 2v70_A SLIT-2, SLIT homolog 2 99.8 5.3E-20 1.8E-24 190.1 12.8 157 387-546 13-170 (220)
359 3e6j_A Variable lymphocyte rec 99.8 3.2E-19 1.1E-23 185.5 18.3 136 433-569 40-176 (229)
360 1h6t_A Internalin B; cell adhe 99.8 6.7E-20 2.3E-24 198.1 12.8 170 119-302 44-213 (291)
361 1h6t_A Internalin B; cell adhe 99.8 7.8E-20 2.7E-24 197.6 13.3 188 76-279 27-214 (291)
362 1m9s_A Internalin B; cell inva 99.8 1.1E-19 3.6E-24 215.3 14.8 187 77-279 25-211 (605)
363 2v9t_B SLIT homolog 2 protein 99.8 1.3E-19 4.3E-24 187.2 13.6 153 388-543 14-166 (220)
364 1m9s_A Internalin B; cell inva 99.8 1.6E-19 5.4E-24 213.8 14.8 202 96-313 20-221 (605)
365 2xot_A Amphoterin-induced prot 99.8 1.5E-19 5.1E-24 202.1 11.0 159 385-543 39-203 (361)
366 3e6j_A Variable lymphocyte rec 99.8 1.3E-18 4.4E-23 180.9 17.3 158 385-546 19-176 (229)
367 1xeu_A Internalin C; cellular 99.8 7.7E-19 2.6E-23 186.6 10.3 171 95-280 17-187 (263)
368 1w8a_A SLIT protein; signaling 99.8 2.1E-18 7.2E-23 173.9 12.7 113 434-546 30-143 (192)
369 1dce_A Protein (RAB geranylger 99.8 8E-20 2.7E-24 215.1 2.2 216 310-559 346-567 (567)
370 4ezg_A Putative uncharacterize 99.8 2.8E-18 9.7E-23 174.0 12.4 155 380-542 39-194 (197)
371 1dce_A Protein (RAB geranylger 99.7 7.2E-20 2.5E-24 215.5 -0.2 190 334-570 346-551 (567)
372 1w8a_A SLIT protein; signaling 99.7 1.1E-18 3.8E-23 176.0 8.5 154 436-592 11-167 (192)
373 1xeu_A Internalin C; cellular 99.7 1.9E-18 6.7E-23 183.5 10.3 168 74-256 20-187 (263)
374 4b8c_D Glucose-repressible alc 99.7 1.2E-18 4E-23 211.8 7.3 154 376-539 215-369 (727)
375 4ezg_A Putative uncharacterize 99.7 7.6E-18 2.6E-22 170.8 11.8 152 118-301 41-193 (197)
376 3sb4_A Hypothetical leucine ri 99.7 2.8E-18 9.7E-23 189.2 5.9 287 192-535 24-327 (329)
377 3sb4_A Hypothetical leucine ri 99.7 5.7E-18 1.9E-22 186.7 7.6 292 158-487 13-327 (329)
378 2wfh_A SLIT homolog 2 protein 99.7 1.8E-17 6.1E-22 167.1 10.0 132 436-571 13-145 (193)
379 1zth_A RIO1 serine protein kin 99.7 1.7E-17 5.8E-22 175.7 9.9 136 678-829 49-219 (258)
380 2ell_A Acidic leucine-rich nuc 99.7 1.5E-16 5E-21 156.8 12.1 135 95-230 22-160 (168)
381 2ell_A Acidic leucine-rich nuc 99.7 2.5E-16 8.4E-21 155.2 12.7 133 384-518 23-160 (168)
382 2wfh_A SLIT homolog 2 protein 99.7 3.7E-16 1.3E-20 157.4 12.5 111 433-544 31-141 (193)
383 2je0_A Acidic leucine-rich nuc 99.7 2E-16 6.9E-21 152.4 9.6 130 95-225 15-148 (149)
384 2o6r_A Variable lymphocyte rec 99.6 6.3E-16 2.2E-20 153.7 12.1 131 436-569 10-141 (177)
385 2je0_A Acidic leucine-rich nuc 99.6 5.2E-16 1.8E-20 149.4 10.8 129 383-513 15-148 (149)
386 2o6r_A Variable lymphocyte rec 99.6 1.1E-15 3.8E-20 151.9 12.8 131 413-546 11-141 (177)
387 4fdw_A Leucine rich hypothetic 99.6 9.2E-15 3.1E-19 164.4 17.1 87 450-539 293-380 (401)
388 4fdw_A Leucine rich hypothetic 99.6 1.5E-14 5.2E-19 162.6 18.2 263 265-564 113-382 (401)
389 1a9n_A U2A', U2A'; complex (nu 99.5 7.7E-15 2.6E-19 145.6 9.5 134 380-518 14-153 (176)
390 4gyi_A RIO2 kinase; protein ki 99.5 1E-15 3.5E-20 167.6 3.2 136 678-830 97-266 (397)
391 4fs7_A Uncharacterized protein 99.5 6.1E-14 2.1E-18 158.5 17.7 303 189-533 90-392 (394)
392 1ds9_A Outer arm dynein; leuci 99.5 1.4E-16 4.8E-21 161.5 -4.2 86 93-180 14-105 (198)
393 1a9n_A U2A', U2A'; complex (nu 99.5 1.4E-14 4.8E-19 143.7 9.7 133 92-230 14-153 (176)
394 1ds9_A Outer arm dynein; leuci 99.5 3.9E-16 1.3E-20 158.3 -2.3 136 142-283 16-158 (198)
395 3g39_A Variable lymphocyte rec 99.5 3.6E-14 1.2E-18 139.6 10.2 107 435-544 11-117 (170)
396 3g39_A Variable lymphocyte rec 99.5 7E-14 2.4E-18 137.5 10.3 109 458-569 10-119 (170)
397 4fs7_A Uncharacterized protein 99.5 4.1E-13 1.4E-17 151.7 17.7 310 188-538 66-375 (394)
398 2r9u_A Variable lymphocyte rec 99.5 1.2E-13 4.1E-18 136.4 10.4 106 435-543 14-119 (174)
399 2r9u_A Variable lymphocyte rec 99.5 1.4E-13 4.9E-18 135.7 10.7 107 460-569 15-122 (174)
400 2ifg_A High affinity nerve gro 99.4 9.3E-13 3.2E-17 146.2 11.1 93 477-569 27-120 (347)
401 3un9_A NLR family member X1; l 99.3 1.7E-14 5.9E-19 160.6 -7.4 135 120-254 71-224 (372)
402 3un9_A NLR family member X1; l 99.3 3.5E-14 1.2E-18 158.1 -6.0 166 96-261 71-259 (372)
403 2ifg_A High affinity nerve gro 99.3 2.6E-12 8.9E-17 142.5 8.6 131 437-570 12-146 (347)
404 4gt6_A Cell surface protein; l 99.3 1.4E-10 4.9E-15 130.7 21.4 132 379-541 259-390 (394)
405 4gt6_A Cell surface protein; l 99.3 7.4E-11 2.5E-15 133.1 17.8 134 425-564 257-390 (394)
406 2ra8_A Uncharacterized protein 99.2 1.4E-11 4.8E-16 135.8 5.7 181 72-254 106-320 (362)
407 3tm0_A Aminoglycoside 3'-phosp 99.1 1.9E-10 6.7E-15 121.9 10.7 143 673-827 11-212 (263)
408 4h09_A Hypothetical leucine ri 99.0 6.4E-09 2.2E-13 116.6 20.1 129 381-513 213-341 (379)
409 4h09_A Hypothetical leucine ri 99.0 1.1E-08 3.8E-13 114.6 19.8 159 378-542 187-345 (379)
410 1nd4_A Aminoglycoside 3'-phosp 99.0 9E-10 3.1E-14 116.6 9.1 136 677-827 21-213 (264)
411 2ra8_A Uncharacterized protein 98.9 4.8E-10 1.6E-14 123.5 4.2 137 187-326 166-320 (362)
412 3rw6_A Nuclear RNA export fact 98.9 2.9E-11 9.8E-16 126.2 -5.6 161 60-247 77-257 (267)
413 3sg8_A APH(2'')-ID; antibiotic 98.8 2.6E-09 8.9E-14 115.7 6.4 187 681-882 25-288 (304)
414 3dxp_A Putative acyl-COA dehyd 98.8 1.1E-08 3.9E-13 113.6 10.3 139 681-828 43-248 (359)
415 1io0_A Tropomodulin; LRR prote 98.6 6E-09 2.1E-13 103.5 -0.8 122 88-230 27-164 (185)
416 3r70_A Aminoglycoside phosphot 98.5 3.2E-07 1.1E-11 99.9 11.3 137 677-829 38-238 (320)
417 1io0_A Tropomodulin; LRR prote 98.4 6.4E-08 2.2E-12 96.0 1.2 40 191-230 91-136 (185)
418 3rw6_A Nuclear RNA export fact 98.3 9.2E-08 3.1E-12 99.6 1.1 41 455-495 168-210 (267)
419 4gkh_A Aminoglycoside 3'-phosp 98.3 3.9E-06 1.3E-10 88.9 12.4 135 683-827 31-222 (272)
420 3tdw_A Gentamicin resistance p 98.3 4E-06 1.4E-10 90.4 12.5 75 681-760 24-102 (306)
421 3d1u_A Putative fructosamine-3 98.1 1.1E-05 3.9E-10 85.7 10.9 74 680-758 19-97 (288)
422 3ovc_A Hygromycin-B 4-O-kinase 97.9 4.6E-05 1.6E-09 84.0 12.0 75 680-759 45-122 (362)
423 3e4g_A ATP synthase subunit S, 97.9 5.9E-06 2E-10 79.6 3.5 82 194-275 62-149 (176)
424 3e4g_A ATP synthase subunit S, 97.8 8.5E-06 2.9E-10 78.5 3.4 64 189-252 81-150 (176)
425 3ats_A Putative uncharacterize 97.7 3.8E-05 1.3E-09 84.8 7.9 79 681-759 25-121 (357)
426 2q83_A YTAA protein; 2635576, 97.7 0.00025 8.6E-09 77.6 14.0 142 682-827 38-251 (346)
427 2olc_A MTR kinase, methylthior 97.7 0.00014 4.7E-09 81.6 11.4 74 681-756 35-120 (397)
428 1pgv_A TMD-1, tropomodulin TMD 97.3 4.6E-05 1.6E-09 74.8 1.1 121 89-230 33-170 (197)
429 3jr1_A Putative fructosamine-3 97.3 0.0033 1.1E-07 67.2 15.2 140 681-824 41-232 (312)
430 3rfe_A Platelet glycoprotein I 97.1 0.00067 2.3E-08 62.2 6.1 61 509-571 12-74 (130)
431 1pgv_A TMD-1, tropomodulin TMD 97.1 0.00019 6.3E-09 70.5 2.3 16 261-276 153-168 (197)
432 2pyw_A Uncharacterized protein 97.0 0.0021 7.3E-08 72.3 10.8 77 797-877 231-312 (420)
433 3f7w_A Putative fructosamine-3 96.9 0.0024 8.2E-08 67.8 10.1 76 678-758 17-97 (288)
434 3dxq_A Choline/ethanolamine ki 96.8 0.0026 9.1E-08 68.0 9.0 70 681-758 23-95 (301)
435 1zyl_A Hypothetical protein YI 96.7 0.0089 3.1E-07 64.6 12.4 142 682-827 32-222 (328)
436 1nw1_A Choline kinase (49.2 KD 96.6 0.0036 1.2E-07 70.5 8.9 73 682-758 79-159 (429)
437 2ppq_A HSK, HK, homoserine kin 96.6 0.0064 2.2E-07 65.6 10.7 145 681-827 27-216 (322)
438 2yle_A Protein spire homolog 1 96.3 0.023 8E-07 55.9 11.3 103 756-880 33-135 (229)
439 3feg_A Choline/ethanolamine ki 96.3 0.0085 2.9E-07 65.8 9.3 142 682-827 56-253 (379)
440 3rfe_A Platelet glycoprotein I 96.3 0.0075 2.6E-07 55.1 7.2 56 437-494 12-68 (130)
441 3csv_A Aminoglycoside phosphot 96.1 0.023 7.9E-07 61.5 11.2 143 682-828 24-217 (333)
442 2qg7_A Ethanolamine kinase PV0 95.9 0.017 5.9E-07 65.2 9.4 74 681-758 113-188 (458)
443 3c5i_A Choline kinase; choline 95.7 0.013 4.6E-07 64.4 7.0 73 682-758 39-121 (369)
444 3i1a_A Spectinomycin phosphotr 95.0 0.082 2.8E-06 57.2 10.3 68 685-758 32-108 (339)
445 3f2s_A CK, chetk-alpha, cholin 93.1 0.34 1.2E-05 53.3 10.5 142 682-827 58-279 (401)
446 3mes_A Choline kinase; malaria 92.3 0.37 1.3E-05 53.5 9.4 73 682-758 76-157 (424)
447 3g15_A CK, chetk-alpha, cholin 86.6 1.5 5.2E-05 48.3 8.8 29 799-827 245-279 (401)
448 3cxl_A N-chimerin; SH2, RHO-GA 76.8 0.33 1.1E-05 54.8 -1.5 60 679-741 145-214 (463)
449 4ano_A ESSB; membrane protein, 76.4 10 0.00035 37.3 9.2 116 729-883 48-164 (219)
450 4ann_A ESSB; membrane protein, 68.8 8.7 0.0003 37.6 6.7 118 729-884 43-160 (215)
451 3ls8_A Phosphatidylinositol 3- 44.1 2.6E+02 0.0091 31.9 14.3 86 734-827 402-501 (614)
452 2lz0_A Uncharacterized protein 34.1 34 0.0012 28.9 3.8 47 492-539 7-53 (100)
453 2lz0_A Uncharacterized protein 33.3 60 0.002 27.3 5.2 42 472-514 11-52 (100)
454 2x6h_A GH13170P, VPS34, phosph 31.2 2.1E+02 0.0072 33.4 10.9 85 735-827 477-575 (696)
455 3ox7_P MH027; urokinase-type p 28.3 18 0.00062 20.2 0.7 10 58-67 5-14 (23)
456 2jwa_A Receptor tyrosine-prote 24.3 68 0.0023 22.4 3.1 8 620-627 15-22 (44)
457 2k1k_A Ephrin type-A receptor 23.1 71 0.0024 21.5 3.0 9 621-629 15-23 (38)
458 1cja_A Protein (actin-fragmin 20.7 2E+02 0.0069 30.0 7.4 140 677-827 70-236 (342)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=6.1e-78 Score=744.28 Aligned_cols=561 Identities=35% Similarity=0.531 Sum_probs=440.6
Q ss_pred CCCchHHHHHHHHHHHhcCCCcccccCCCCCCCCCCCcceeeeCCCCCceEEEeecCCCCCcc---cc------------
Q 002061 26 SLSLNVETQALIQFKSKLKDPHGVLDSWKESADSPCGFSGITCDSVTGRVTEISFDNKSLSGE---IS------------ 90 (973)
Q Consensus 26 ~~~~~~~~~aLl~~k~~~~d~~~~~~~W~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~---~~------------ 90 (973)
+.+.++|++|||+||+++.||. .+++|+.++ +||.|.||+|+ ++||++|+|++.+++|. ++
T Consensus 7 ~~~~~~~~~all~~k~~~~~~~-~l~~W~~~~-~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l 82 (768)
T 3rgz_A 7 SQSLYREIHQLISFKDVLPDKN-LLPDWSSNK-NPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESL 82 (768)
T ss_dssp -CCHHHHHHHHHHHHTTCSCTT-SSTTCCTTS-CGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEE
T ss_pred ccCCHHHHHHHHHHHhhCCCcc-cccCCCCCC-CCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCccccc
Confidence 4457899999999999999998 899998554 58999999998 68999999999999987 44
Q ss_pred -----------ccccCCccCcEeeCCCCcccCcCCh--hhhCCCCCcEEEecCCcccCCCCc-c-cCCCCCCEEeccCcc
Q 002061 91 -----------SSISALQSLTVLSLPFNVLSGKLPL--ELSNCSNLKVLNVTGNAMVGSVPD-L-SALKNLEIFDLSINY 155 (973)
Q Consensus 91 -----------~~l~~l~~L~~L~Ls~n~l~~~~p~--~l~~l~~L~~L~L~~n~l~~~~~~-l-~~l~~L~~L~Ls~n~ 155 (973)
+.++.+++|++|+|++|.++|.+|. .++++++|++|+|++|.+.+..+. + .++++|++|||++|.
T Consensus 83 ~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 162 (768)
T 3rgz_A 83 FLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANS 162 (768)
T ss_dssp ECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSC
T ss_pred CCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCc
Confidence 4678889999999999999998888 899999999999999988766553 2 556666666666665
Q ss_pred CCCccccc---c----------------------ccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccCCCCCCCC
Q 002061 156 FTGRFPRW---V----------------------VNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIP 210 (973)
Q Consensus 156 l~~~~~~~---~----------------------~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~~ 210 (973)
+++..|.. + ..+++|++|++++|.+.. .+|. ++++++|++|+|++|++++.+|
T Consensus 163 l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~-l~~l~~L~~L~Ls~n~l~~~~~ 240 (768)
T 3rgz_A 163 ISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFST-GIPF-LGDCSALQHLDISGNKLSGDFS 240 (768)
T ss_dssp CEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCS-CCCB-CTTCCSCCEEECCSSCCCSCHH
T ss_pred cCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCC-CCcc-cccCCCCCEEECcCCcCCCccc
Confidence 55443332 1 334455555555555542 2233 5555555555555555555555
Q ss_pred hhhhccCCCCeeeccccccc----------------------CCCchhhhcc-ccccEEEeeccccCCcCCccccccccc
Q 002061 211 ESISELRELGTLDICRNKIS----------------------GEFPRSIRKL-QKLWKIELYANNLTGELPAELGNLTLL 267 (973)
Q Consensus 211 ~~~~~l~~L~~L~L~~N~l~----------------------~~~~~~l~~l-~~L~~L~L~~N~l~~~~~~~l~~l~~L 267 (973)
..++.+++|++|+|++|+++ +.+|..+..+ ++|++|+|++|.+++.+|..|+++++|
T Consensus 241 ~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L 320 (768)
T 3rgz_A 241 RAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLL 320 (768)
T ss_dssp HHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTC
T ss_pred HHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCc
Confidence 55544444444444444333 3444444443 666666666666666666666666666
Q ss_pred cEEEeeccccccccCCc-cCCCCCccEEEcccCCCCCCCCC-------------------------CcCC--cccceeee
Q 002061 268 QEFDISSNQMYGKLPEE-IGNLKNLTVFQCFKNNFSGEFPS-------------------------GFGD--MRKLFAFS 319 (973)
Q Consensus 268 ~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~p~-------------------------~~~~--l~~L~~L~ 319 (973)
++|+|++|++.+.+|.. +.++++|++|++++|++++.+|. .+.. +++|+.|+
T Consensus 321 ~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~ 400 (768)
T 3rgz_A 321 ESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELY 400 (768)
T ss_dssp CEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEE
T ss_pred cEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEE
Confidence 66666666665555544 55555555555555555544444 4333 56677777
Q ss_pred ccCCccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEecccccccc
Q 002061 320 IYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSG 399 (973)
Q Consensus 320 l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~ 399 (973)
+++|.+++.+|..+..+++|++|+|++|++++.+|..+..+.++..+....|.+.+.+|..+..+++|++|+|++|++++
T Consensus 401 L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 480 (768)
T 3rgz_A 401 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTG 480 (768)
T ss_dssp CCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCS
T ss_pred CCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccC
Confidence 77777777888889999999999999999999999998888876666666788888999999999999999999999999
Q ss_pred CCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccc--
Q 002061 400 KIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSAL-- 477 (973)
Q Consensus 400 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-- 477 (973)
.+|..+..+++|++|+|++|++++.+|..++.+++|++|+|++|++++.+|..++.+++|++|+|++|+++|.+|..+
T Consensus 481 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~ 560 (768)
T 3rgz_A 481 EIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK 560 (768)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGT
T ss_pred cCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999987777543
Q ss_pred --------------------------------------------------------------------cccccCCEEEcC
Q 002061 478 --------------------------------------------------------------------GALRQLSSLHLE 489 (973)
Q Consensus 478 --------------------------------------------------------------------~~l~~L~~L~Ls 489 (973)
+.+++|++|||+
T Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs 640 (768)
T 3rgz_A 561 QSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMS 640 (768)
T ss_dssp TTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECC
T ss_pred ccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECc
Confidence 335789999999
Q ss_pred CcccccCCCccccccccccchhccccccccCCCccccccCCCCeeecCCCccCCCCChhhhccc-CceEEccCCcccccc
Q 002061 490 ENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSV 568 (973)
Q Consensus 490 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-L~~l~ls~N~l~~~~ 568 (973)
+|+++|.+|.+++++++|+.|+|++|+++|.+|..|+++++|+.|||++|+|+|.+|..+..++ |+.|||++|+++|.|
T Consensus 641 ~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~i 720 (768)
T 3rgz_A 641 YNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPI 720 (768)
T ss_dssp SSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEEC
T ss_pred CCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999997 999999999999999
Q ss_pred Ccc--cccCCCCccccCCCCCccCccc
Q 002061 569 PLD--FLRMGGDGAFAGNEGLCLDQST 593 (973)
Q Consensus 569 p~~--~~~~~~~~~~~~n~~lc~~~~~ 593 (973)
|.. |..+.. .+|.|||++||.|+.
T Consensus 721 P~~~~~~~~~~-~~~~gN~~Lcg~~l~ 746 (768)
T 3rgz_A 721 PEMGQFETFPP-AKFLNNPGLCGYPLP 746 (768)
T ss_dssp CSSSSGGGSCG-GGGCSCTEEESTTSC
T ss_pred CCchhhccCCH-HHhcCCchhcCCCCc
Confidence 974 666665 789999999999873
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=5e-61 Score=593.25 Aligned_cols=496 Identities=30% Similarity=0.472 Sum_probs=409.4
Q ss_pred ceEEEeecCCCCCccccccc-cCCccCcEeeCCCCcccCcCChh-------------------------hhCCCCCcEEE
Q 002061 74 RVTEISFDNKSLSGEISSSI-SALQSLTVLSLPFNVLSGKLPLE-------------------------LSNCSNLKVLN 127 (973)
Q Consensus 74 ~v~~l~l~~~~l~~~~~~~l-~~l~~L~~L~Ls~n~l~~~~p~~-------------------------l~~l~~L~~L~ 127 (973)
+.+.|+|+++.+++.+|..+ ..+++|++|+|++|.+++..|.. ++.+++|++|+
T Consensus 127 ~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~ 206 (768)
T 3rgz_A 127 GLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLD 206 (768)
T ss_dssp TCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEE
T ss_pred CCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEE
Confidence 45555555555555555443 44455555555555444433332 25667777777
Q ss_pred ecCCcccCCCCcccCCCCCCEEeccCccCCCccccccccccccceEEccCCcCCCC---------------------CCc
Q 002061 128 VTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEA---------------------EIP 186 (973)
Q Consensus 128 L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---------------------~ip 186 (973)
|++|.+.+.++.++++++|++|+|++|.+++.+|..+.++++|++|++++|.+... .+|
T Consensus 207 Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip 286 (768)
T 3rgz_A 207 VSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIP 286 (768)
T ss_dssp CCSSCCCSCCCBCTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCC
T ss_pred CcCCcCCCCCcccccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccC
Confidence 77777777666677888888888888888877888888888888887777766421 345
Q ss_pred ccccCC-CCCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchh-hhccccccEEEeeccccCCcCCcccccc
Q 002061 187 ESIGNL-KNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRS-IRKLQKLWKIELYANNLTGELPAELGNL 264 (973)
Q Consensus 187 ~~~~~l-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-l~~l~~L~~L~L~~N~l~~~~~~~l~~l 264 (973)
..+..+ ++|++|+|++|++++.+|..|+.+++|++|+|++|++++.+|.. +.++++|++|+|++|.+++.+|..+.++
T Consensus 287 ~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l 366 (768)
T 3rgz_A 287 DFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNL 366 (768)
T ss_dssp CCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHH
T ss_pred HHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhh
Confidence 555553 77777777777777777777777788888888888777677765 7777888888888888877777777777
Q ss_pred c-cccEEEeeccccccccCCccCC--CCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCCccccccccccc
Q 002061 265 T-LLQEFDISSNQMYGKLPEEIGN--LKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTD 341 (973)
Q Consensus 265 ~-~L~~L~Ls~N~l~~~~p~~~~~--l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~ 341 (973)
+ +|++|++++|++++.+|..+.. +++|++|++++|++++.+|..++.+++|+.|++++|++++.+|..++.+++|+.
T Consensus 367 ~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 446 (768)
T 3rgz_A 367 SASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRD 446 (768)
T ss_dssp TTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCE
T ss_pred hcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCE
Confidence 6 7888888888888777877776 788999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcC
Q 002061 342 VDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDF 421 (973)
Q Consensus 342 L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 421 (973)
|++++|++++.+|..+.....+..+...+|++.+.+|..+.++++|++|+|++|++++.+|.++..+++|++|+|++|++
T Consensus 447 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 526 (768)
T 3rgz_A 447 LKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSF 526 (768)
T ss_dssp EECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCC
T ss_pred EECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcc
Confidence 99999999999999998888776666667888889999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCEEEcccCCCCCCCChhhh-----------------------------------------------
Q 002061 422 TGGISPLIGLSTSLSQLVLQNNRFSGELPSELG----------------------------------------------- 454 (973)
Q Consensus 422 ~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~----------------------------------------------- 454 (973)
++.+|..++.+++|+.|+|++|+++|.+|..+.
T Consensus 527 ~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (768)
T 3rgz_A 527 SGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNR 606 (768)
T ss_dssp EEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGG
T ss_pred cCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhc
Confidence 999999999999999999999999988886553
Q ss_pred -----------------------cCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchh
Q 002061 455 -----------------------RLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLN 511 (973)
Q Consensus 455 -----------------------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 511 (973)
.+++|+.|+|++|+++|.+|..++++++|+.|+|++|+++|.+|..|+++++|+.||
T Consensus 607 l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~Ld 686 (768)
T 3rgz_A 607 LSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILD 686 (768)
T ss_dssp GGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEE
T ss_pred cccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEE
Confidence 346799999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCccccccCCCCeeecCCCccCCCCChhhhcccCceEEccCCccccccC
Q 002061 512 LARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLKLSSIDLSENQLSGSVP 569 (973)
Q Consensus 512 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~L~~l~ls~N~l~~~~p 569 (973)
|++|+++|.+|..+..+++|++|+|++|+|+|.||..-.-..+....+.+|+.-|-.|
T Consensus 687 Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~ 744 (768)
T 3rgz_A 687 LSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP 744 (768)
T ss_dssp CCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTT
T ss_pred CCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCC
Confidence 9999999999999999999999999999999999986322235566778887554333
No 3
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.7e-57 Score=549.40 Aligned_cols=505 Identities=18% Similarity=0.187 Sum_probs=406.6
Q ss_pred cceeeeCCC---------CCceEEEeecCCCCCccccccccCCccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcc
Q 002061 63 FSGITCDSV---------TGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAM 133 (973)
Q Consensus 63 w~gv~C~~~---------~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l 133 (973)
+..|.|... ...++.|+|+++.+++..|..++.+++|++|+|++|.+++..|..|+.+++|++|+|++|++
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 556888642 25799999999999998899999999999999999999988899999999999999999999
Q ss_pred cCCCC-cccCCCCCCEEeccCccCCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccCCCCCCCChh
Q 002061 134 VGSVP-DLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPES 212 (973)
Q Consensus 134 ~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~~~~ 212 (973)
++.++ .|+++++|++|+|++|.+++..+..+.++++|++|++++|.+....+|..++ +++|++|++++|++++..|..
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~ 172 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFP-TEKLKVLDFQNNAIHYLSKED 172 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCC-CTTCCEEECCSSCCCEECHHH
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccC-CcccCEEEcccCcccccChhh
Confidence 88765 6999999999999999999888899999999999999999998766666655 999999999999999888999
Q ss_pred hhccCCCC--eeecccccccCCCchhhhccccccEEEeeccccC--------------------------CcCCcccccc
Q 002061 213 ISELRELG--TLDICRNKISGEFPRSIRKLQKLWKIELYANNLT--------------------------GELPAELGNL 264 (973)
Q Consensus 213 ~~~l~~L~--~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~--------------------------~~~~~~l~~l 264 (973)
++.+++|+ +|++++|++++..|..+.. .+|++|++++|... ...+..+..+
T Consensus 173 ~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l 251 (606)
T 3t6q_A 173 MSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGL 251 (606)
T ss_dssp HHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGG
T ss_pred hhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchh
Confidence 99999999 8999999999777766543 45555555544300 0011112222
Q ss_pred c--cccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCCcccccccccccc
Q 002061 265 T--LLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDV 342 (973)
Q Consensus 265 ~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L 342 (973)
. +|+.|++++|.+++..+..|.++++|++|++++|+++ .+|..+..+++|++|++++|++++..|..+..+++|++|
T Consensus 252 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 330 (606)
T 3t6q_A 252 CEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHL 330 (606)
T ss_dssp GGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEE
T ss_pred hcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEE
Confidence 1 4566666666666555555666666666666666665 455556666666666666666665555556666666666
Q ss_pred ccccccccccCChh-hhhhhhHHHHHhhhccCCCCc--cccccCccccceEeccccccccCCCccccCCCCcceEeccCC
Q 002061 343 DISENQFSGSFPKY-LCEKRKLLNLLALSNNFSGEV--PNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDN 419 (973)
Q Consensus 343 ~Ls~N~l~~~~p~~-~~~~~~ll~ll~l~n~~~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 419 (973)
++++|.+.+.+|.. +..+..+..+....|.+.+.. +..+..+++|++|++++|++.+..|..|..+++|+.|++++|
T Consensus 331 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 410 (606)
T 3t6q_A 331 SIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFT 410 (606)
T ss_dssp ECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTC
T ss_pred ECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCC
Confidence 66666665544443 333333222222233333333 667899999999999999999999999999999999999999
Q ss_pred cCCCCCCCC-CCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCC---ccccccccccCCEEEcCCccccc
Q 002061 420 DFTGGISPL-IGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGK---IPSALGALRQLSSLHLEENALTG 495 (973)
Q Consensus 420 ~l~~~~~~~-~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~ 495 (973)
++++..+.. +..+++|++|++++|.+.+..|..+..+++|++|+|++|++++. .+..+..+++|++|+|++|++++
T Consensus 411 ~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~ 490 (606)
T 3t6q_A 411 RLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSS 490 (606)
T ss_dssp CEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCE
T ss_pred cCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCc
Confidence 999876654 88999999999999999999999999999999999999999863 34679999999999999999999
Q ss_pred CCCccccccccccchhccccccccCCCccccccCCCCeeecCCCccCCCCChhhhccc-CceEEccCCccccccCcc
Q 002061 496 SIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLD 571 (973)
Q Consensus 496 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-L~~l~ls~N~l~~~~p~~ 571 (973)
..|..|+++++|+.|+|++|++++..|..|..+++| .|+|++|++++.+|..+..++ |+.+++++|+|.|.|+..
T Consensus 491 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 566 (606)
T 3t6q_A 491 IDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNI 566 (606)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGGH
T ss_pred cChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCcH
Confidence 999999999999999999999999999999999999 999999999998888888875 999999999999999953
No 4
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=7.1e-59 Score=560.78 Aligned_cols=490 Identities=20% Similarity=0.279 Sum_probs=355.1
Q ss_pred chHHHHHHHHHHHhcCCCc-c-------cccCCCCCCCCCCCc---ceeeeCCCCCceEEEeecCCCCCccccccccCCc
Q 002061 29 LNVETQALIQFKSKLKDPH-G-------VLDSWKESADSPCGF---SGITCDSVTGRVTEISFDNKSLSGEISSSISALQ 97 (973)
Q Consensus 29 ~~~~~~aLl~~k~~~~d~~-~-------~~~~W~~~~~~~c~w---~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~ 97 (973)
...|++||.+||+++.++. . ..++|+.+ .+||.| .||+|+.. +||++|+|++++++|.+|+++++|+
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~-~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~L~ 105 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN-KELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQLT 105 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCCS-SCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGGCT
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC-CCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhcCc
Confidence 3579999999999986542 2 23489876 458999 99999864 8999999999999999999999999
Q ss_pred cCcEeeCCCCcc------cC------cCChhhhCCCCCcEEEecCCcccCCCCc-ccC-C------------------CC
Q 002061 98 SLTVLSLPFNVL------SG------KLPLELSNCSNLKVLNVTGNAMVGSVPD-LSA-L------------------KN 145 (973)
Q Consensus 98 ~L~~L~Ls~n~l------~~------~~p~~l~~l~~L~~L~L~~n~l~~~~~~-l~~-l------------------~~ 145 (973)
+|++|+|++|.+ .+ .+|... +.+|+ +++++|.+.+.++. +.. + ..
T Consensus 106 ~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 182 (636)
T 4eco_A 106 ELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRIT 182 (636)
T ss_dssp TCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCC
T ss_pred cceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccc
Confidence 999999999976 33 556555 56677 88888877776553 331 1 12
Q ss_pred CCEEecc--CccCCCccccccccccccceEEccCCcCCCC----------------CCccccc--CCCCCCEEEcccCCC
Q 002061 146 LEIFDLS--INYFTGRFPRWVVNLTQLVSLSIGDNVYDEA----------------EIPESIG--NLKNLTYLFLAHCNL 205 (973)
Q Consensus 146 L~~L~Ls--~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~----------------~ip~~~~--~l~~L~~L~L~~n~l 205 (973)
++.+.+. .|++++ +|..++++++|++|+|++|.++.. .+|+.++ ++++|++|+|++|++
T Consensus 183 l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l 261 (636)
T 4eco_A 183 LKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPN 261 (636)
T ss_dssp CCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTT
T ss_pred hhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcC
Confidence 2222222 567777 788888888888888888887641 0778877 888888888888888
Q ss_pred CCCCChhhhccCCCCeeeccccc-ccC-CCchhhhcc------ccccEEEeeccccCCcCCc--cccccccccEEEeecc
Q 002061 206 RGRIPESISELRELGTLDICRNK-ISG-EFPRSIRKL------QKLWKIELYANNLTGELPA--ELGNLTLLQEFDISSN 275 (973)
Q Consensus 206 ~~~~~~~~~~l~~L~~L~L~~N~-l~~-~~~~~l~~l------~~L~~L~L~~N~l~~~~~~--~l~~l~~L~~L~Ls~N 275 (973)
.+.+|..++++++|++|+|++|+ +++ .+|..++++ ++|++|+|++|+++ .+|. .++++++|++|++++|
T Consensus 262 ~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N 340 (636)
T 4eco_A 262 LTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYN 340 (636)
T ss_dssp CSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSC
T ss_pred CccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCC
Confidence 88888888888888888888887 877 778877776 78888888888888 6777 7888888888888888
Q ss_pred ccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccc-ceeeeccCCccCCCCCccccccc--ccccccccccccccc
Q 002061 276 QMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRK-LFAFSIYGNRFSGPFPENLGRYT--ALTDVDISENQFSGS 352 (973)
Q Consensus 276 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~-L~~L~l~~N~l~~~~~~~l~~l~--~L~~L~Ls~N~l~~~ 352 (973)
+++|.+| .+..+++|+.|++++|+++ .+|..++.+++ |+.|++++|+++ .+|..+..+. +|++|++++|++++.
T Consensus 341 ~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~ 417 (636)
T 4eco_A 341 QLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSV 417 (636)
T ss_dssp CCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTT
T ss_pred cCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCc
Confidence 8887777 7777888888888888887 67777777777 888888888877 6676666654 777777777777765
Q ss_pred CChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCC
Q 002061 353 FPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLS 432 (973)
Q Consensus 353 ~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 432 (973)
+|..+.. .......+++|++|+|++|+|++..+..+..+++|+.|+|++|+++.++...+...
T Consensus 418 ~p~~l~~-----------------~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~ 480 (636)
T 4eco_A 418 DGKNFDP-----------------LDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDE 480 (636)
T ss_dssp TTCSSCT-----------------TCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEET
T ss_pred chhhhcc-----------------cccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccc
Confidence 5543210 00111145677777777777774333344457777777777777775555444433
Q ss_pred C-------CCCEEEcccCCCCCCCChhhh--cCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccc
Q 002061 433 T-------SLSQLVLQNNRFSGELPSELG--RLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGD 503 (973)
Q Consensus 433 ~-------~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 503 (973)
. +|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|++|+|++|+
T Consensus 481 ~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~----------- 547 (636)
T 4eco_A 481 NENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQR----------- 547 (636)
T ss_dssp TEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCB-----------
T ss_pred cccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCc-----------
Confidence 2 6777777777777 5666665 67777777777777765 66666677777777775554
Q ss_pred cccccchhccccccccCCCccccccCCCCeeecCCCccCCCCChhhhcccCceEEccCCccccc
Q 002061 504 CARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLKLSSIDLSENQLSGS 567 (973)
Q Consensus 504 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~L~~l~ls~N~l~~~ 567 (973)
++++|++.+.+|..+..+++|+.|+|++|+| +.+|..+. -.|+.|+|++|++.+.
T Consensus 548 -------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~-~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 548 -------DAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT-PNISVLDIKDNPNISI 602 (636)
T ss_dssp -------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC-TTCCEEECCSCTTCEE
T ss_pred -------ccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh-CcCCEEECcCCCCccc
Confidence 3466777777777777777777777777777 46676654 3477777777777654
No 5
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.1e-57 Score=557.83 Aligned_cols=500 Identities=19% Similarity=0.262 Sum_probs=385.3
Q ss_pred CchHHHHHHHHHHHhcCCCcccccCCCCCC----CCC--CCc------------ceeeeCCCCCceEEEeecCCCCCccc
Q 002061 28 SLNVETQALIQFKSKLKDPHGVLDSWKESA----DSP--CGF------------SGITCDSVTGRVTEISFDNKSLSGEI 89 (973)
Q Consensus 28 ~~~~~~~aLl~~k~~~~d~~~~~~~W~~~~----~~~--c~w------------~gv~C~~~~~~v~~l~l~~~~l~~~~ 89 (973)
...+|++||++||+++.|| +|+.++ .+| |.| .||+|+. ++||++|+|++++++|.+
T Consensus 266 ~~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~i 339 (876)
T 4ecn_A 266 EYIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGRV 339 (876)
T ss_dssp HHHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEEE
T ss_pred cchHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCcC
Confidence 3468999999999999887 787654 234 999 9999987 799999999999999999
Q ss_pred cccccCCccCcEeeC-CCCcccCcCChhhhCCC-CCcE---EEe------------cCCccc-----------CC-CCcc
Q 002061 90 SSSISALQSLTVLSL-PFNVLSGKLPLELSNCS-NLKV---LNV------------TGNAMV-----------GS-VPDL 140 (973)
Q Consensus 90 ~~~l~~l~~L~~L~L-s~n~l~~~~p~~l~~l~-~L~~---L~L------------~~n~l~-----------~~-~~~l 140 (973)
|++|++|++|++|+| ++|.++|..|....... .+.. ..+ ....+. .. +...
T Consensus 340 p~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~ 419 (876)
T 4ecn_A 340 PDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKK 419 (876)
T ss_dssp CGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCC
T ss_pred chHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccc
Confidence 999999999999999 89999887553311110 0000 000 000000 00 0011
Q ss_pred cCCCCCCEEeccC--ccCCCccccccccccccceEEccCCcCCCC----------------CCccccc--CCCCCCEEEc
Q 002061 141 SALKNLEIFDLSI--NYFTGRFPRWVVNLTQLVSLSIGDNVYDEA----------------EIPESIG--NLKNLTYLFL 200 (973)
Q Consensus 141 ~~l~~L~~L~Ls~--n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~----------------~ip~~~~--~l~~L~~L~L 200 (973)
.....++.+.++. |.+++ +|..|.++++|++|+|++|.++.. .+|+.++ ++++|++|+|
T Consensus 420 ~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~L 498 (876)
T 4ecn_A 420 DSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVEL 498 (876)
T ss_dssp CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEE
T ss_pred ccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEEC
Confidence 2233444444444 77887 788888888888888888888741 2889888 9999999999
Q ss_pred ccCCCCCCCChhhhccCCCCeeeccccc-ccC-CCchhhhccc-------cccEEEeeccccCCcCCc--cccccccccE
Q 002061 201 AHCNLRGRIPESISELRELGTLDICRNK-ISG-EFPRSIRKLQ-------KLWKIELYANNLTGELPA--ELGNLTLLQE 269 (973)
Q Consensus 201 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~-~~~~~l~~l~-------~L~~L~L~~N~l~~~~~~--~l~~l~~L~~ 269 (973)
++|++.+.+|..|+++++|++|+|++|+ +++ .+|..+++++ +|++|+|++|+++ .+|. .++++++|+.
T Consensus 499 s~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~ 577 (876)
T 4ecn_A 499 YNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGL 577 (876)
T ss_dssp ESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCE
T ss_pred cCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCE
Confidence 9999999999999999999999999998 998 8999888877 9999999999999 8888 8999999999
Q ss_pred EEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccc-ceeeeccCCccCCCCCcccccccc--cccccccc
Q 002061 270 FDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRK-LFAFSIYGNRFSGPFPENLGRYTA--LTDVDISE 346 (973)
Q Consensus 270 L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~-L~~L~l~~N~l~~~~~~~l~~l~~--L~~L~Ls~ 346 (973)
|+|++|+++ .+| .++++++|+.|++++|+++ .+|..+..+++ |+.|++++|+++ .+|..+..+.. |+.|+|++
T Consensus 578 L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~ 653 (876)
T 4ecn_A 578 LDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSY 653 (876)
T ss_dssp EECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCS
T ss_pred EECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcC
Confidence 999999998 788 8999999999999999999 88888999999 999999999999 78888877765 99999999
Q ss_pred ccccccCChhhhhhhhHHHHHhhhccCCCCcccccc--CccccceEeccccccccCCCccc-cCCCCcceEeccCCcCCC
Q 002061 347 NQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYA--DCKTIQRLRISDNHLSGKIPDGL-WALPNVGMLDFGDNDFTG 423 (973)
Q Consensus 347 N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~ 423 (973)
|++++.+|.. +..+. .+++|++|+|++|+|+ .+|..+ ..+++|+.|+|++|+++.
T Consensus 654 N~l~g~ip~l---------------------~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~~ 711 (876)
T 4ecn_A 654 NKIGSEGRNI---------------------SCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMTS 711 (876)
T ss_dssp SCTTTTSSSC---------------------SSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCSC
T ss_pred CcCCCccccc---------------------hhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCCc
Confidence 9998766542 22222 3458999999999999 556554 478999999999999996
Q ss_pred CCCCCCCCC-------CCCCEEEcccCCCCCCCChhhh--cCCCCCEEEccCCcCCCCccccccccccCCEEEcCC----
Q 002061 424 GISPLIGLS-------TSLSQLVLQNNRFSGELPSELG--RLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEE---- 490 (973)
Q Consensus 424 ~~~~~~~~~-------~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~---- 490 (973)
++...+... ++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++
T Consensus 712 ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~l 789 (876)
T 4ecn_A 712 IPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDA 789 (876)
T ss_dssp CCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCT
T ss_pred cChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCc
Confidence 666555543 38999999999999 7888887 89999999999999996 788899999999999987
Q ss_pred --cccccCCCccccccccccchhccccccccCCCccccccCCCCeeecCCCccCCCCChhhhcc-cCceEEccCCcccc
Q 002061 491 --NALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL-KLSSIDLSENQLSG 566 (973)
Q Consensus 491 --N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l-~L~~l~ls~N~l~~ 566 (973)
|++.+.+|..|.++++|+.|+|++|+| +.+|..+. ++|+.|+|++|++...-+..+... .+..+.|.+|++..
T Consensus 790 s~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~~ 865 (876)
T 4ecn_A 790 EGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQD 865 (876)
T ss_dssp TCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTSE
T ss_pred ccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCccc
Confidence 555555666666666666666666666 35555443 456666666666553333333332 24445555555443
No 6
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.5e-56 Score=548.54 Aligned_cols=531 Identities=19% Similarity=0.198 Sum_probs=404.8
Q ss_pred CCCcceeeeCC---------CCCceEEEeecCCCCCccccccccCCccCcEeeCCCCcccCcCChhhhCCCCCcEEEecC
Q 002061 60 PCGFSGITCDS---------VTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTG 130 (973)
Q Consensus 60 ~c~w~gv~C~~---------~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~ 130 (973)
.|.+.-|.|.. ...+++.|+|+++++++..+..++.+++|++|+|++|.+++..|..|+++++|++|+|++
T Consensus 3 ~~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 82 (680)
T 1ziw_A 3 TVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQH 82 (680)
T ss_dssp -CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCS
T ss_pred eeECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCC
Confidence 36666677753 235799999999999998888899999999999999999999999999999999999999
Q ss_pred CcccCCCCc-ccCCCCCCEEeccCccCCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccCCCCCCC
Q 002061 131 NAMVGSVPD-LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRI 209 (973)
Q Consensus 131 n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~ 209 (973)
|.+++.++. |+++++|++|+|++|.+++..|..|.++++|++|++++|.+... .|..++++++|++|++++|++++..
T Consensus 83 n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~ 161 (680)
T 1ziw_A 83 NELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSST-KLGTQVQLENLQELLLSNNKIQALK 161 (680)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCC-CCCSSSCCTTCCEEECCSSCCCCBC
T ss_pred CccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCccccc-CchhhcccccCCEEEccCCcccccC
Confidence 999998874 99999999999999999988889999999999999999998753 4677899999999999999999877
Q ss_pred Chhhh--ccCCCCeeecccccccCCCchhhhcc---------------------------ccccEEEeeccccCCcCCcc
Q 002061 210 PESIS--ELRELGTLDICRNKISGEFPRSIRKL---------------------------QKLWKIELYANNLTGELPAE 260 (973)
Q Consensus 210 ~~~~~--~l~~L~~L~L~~N~l~~~~~~~l~~l---------------------------~~L~~L~L~~N~l~~~~~~~ 260 (973)
+..+. .+++|++|++++|++++..|..+..+ ++|++|++++|.+++..|..
T Consensus 162 ~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~ 241 (680)
T 1ziw_A 162 SEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTT 241 (680)
T ss_dssp HHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTT
T ss_pred HHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhH
Confidence 77665 45889999999999887777666543 34566666666676666666
Q ss_pred cccccc--ccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCc--------------------------
Q 002061 261 LGNLTL--LQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDM-------------------------- 312 (973)
Q Consensus 261 l~~l~~--L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l-------------------------- 312 (973)
|.+++. |++|+|++|++++..|..++.+++|++|++++|++.+..|..|..+
T Consensus 242 ~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~ 321 (680)
T 1ziw_A 242 FLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKID 321 (680)
T ss_dssp TGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEEC
T ss_pred hhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccC
Confidence 666644 7777777777776666677777777777777777766655555444
Q ss_pred -------ccceeeeccCCccCCCCCcccccccccccccccccccccc-CCh-hhhhhh-hHHHHHhh-hccCCCCccccc
Q 002061 313 -------RKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGS-FPK-YLCEKR-KLLNLLAL-SNNFSGEVPNSY 381 (973)
Q Consensus 313 -------~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~-~p~-~~~~~~-~ll~ll~l-~n~~~~~~p~~~ 381 (973)
++|+.|++++|.+++..+..|..+++|++|++++|.++.. ++. .+.... ..++.+.+ .|++.+..|..|
T Consensus 322 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~ 401 (680)
T 1ziw_A 322 DFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAF 401 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTT
T ss_pred hhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhh
Confidence 4555555555555555555555555555555555543211 111 111110 01112222 455666667888
Q ss_pred cCccccceEeccccccccCCC-ccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCC--CCCChhhhcCCC
Q 002061 382 ADCKTIQRLRISDNHLSGKIP-DGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFS--GELPSELGRLTN 458 (973)
Q Consensus 382 ~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~--~~~p~~~~~l~~ 458 (973)
..+++|++|+|++|++++.+| ..|.++++|++|++++|++++..+..|..+++|+.|++++|.+. +..|..|.++++
T Consensus 402 ~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~ 481 (680)
T 1ziw_A 402 SWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRN 481 (680)
T ss_dssp TTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTT
T ss_pred hCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCC
Confidence 889999999999999987665 67888899999999999988888888888888888888888876 567888888888
Q ss_pred CCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCC--------ccccccccccchhccccccccCCCccccccCC
Q 002061 459 LERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIP--------NEMGDCARIVDLNLARNSLSGNIPRSLSLLSS 530 (973)
Q Consensus 459 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 530 (973)
|++|+|++|++++..+..|.++++|++|+|++|++++..+ ..|.++++|+.|+|++|+++...+..|.++++
T Consensus 482 L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~ 561 (680)
T 1ziw_A 482 LTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFE 561 (680)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred CCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccC
Confidence 9999999999887777888888889999999988886532 23778888888888888888555567888888
Q ss_pred CCeeecCCCccCCCCChhhhccc-CceEEccCCccccccCcccc-cCCC--CccccCCCCCccCc
Q 002061 531 LNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLDFL-RMGG--DGAFAGNEGLCLDQ 591 (973)
Q Consensus 531 L~~L~L~~N~l~~~~p~~l~~l~-L~~l~ls~N~l~~~~p~~~~-~~~~--~~~~~~n~~lc~~~ 591 (973)
|+.|+|++|+|++.++..+..++ |+.|+|++|++++..|..+. .+.. .-.+.+||+.|..+
T Consensus 562 L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 562 LKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred cceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 99999998988866666666665 88888888888887665443 2222 24568888888654
No 7
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=3.4e-55 Score=546.74 Aligned_cols=496 Identities=19% Similarity=0.224 Sum_probs=386.6
Q ss_pred CCcceeeeCCCCCceEEEeecCCCCCccccccccCCccCcEeeCCCCcccCcC-ChhhhCCCCCcEEEecCCcccCCCC-
Q 002061 61 CGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKL-PLELSNCSNLKVLNVTGNAMVGSVP- 138 (973)
Q Consensus 61 c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~-p~~l~~l~~L~~L~L~~n~l~~~~~- 138 (973)
|.|..|.+ ...+++.|||+++.+++..+..+..+++|++|+|++|.+.+.+ |..|+++++|++|+|++|.+.+..+
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 56788877 5678999999999999999999999999999999999777677 7889999999999999999998755
Q ss_pred cccCCCCCCEEeccCccCCCccccc--cccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccCCCCCCCChhhhcc
Q 002061 139 DLSALKNLEIFDLSINYFTGRFPRW--VVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISEL 216 (973)
Q Consensus 139 ~l~~l~~L~~L~Ls~n~l~~~~~~~--~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 216 (973)
.|+++++|++|+|++|.+++..|.. |.++++|++|+|++|.+.....+..++++++|++|+|++|.+++..+..+..+
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 6999999999999999999877665 99999999999999999876666789999999999999999999999999988
Q ss_pred --CCCCeeecccccccCCCchhhhcccc------ccEEEeeccccCCcCCccccc-------------------------
Q 002061 217 --RELGTLDICRNKISGEFPRSIRKLQK------LWKIELYANNLTGELPAELGN------------------------- 263 (973)
Q Consensus 217 --~~L~~L~L~~N~l~~~~~~~l~~l~~------L~~L~L~~N~l~~~~~~~l~~------------------------- 263 (973)
++|+.|+|++|.+++..|..++.+.+ |++|++++|.+++..+..+..
T Consensus 172 ~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~ 251 (844)
T 3j0a_A 172 QGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHN 251 (844)
T ss_dssp HHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSS
T ss_pred cCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccc
Confidence 89999999999999888887776665 999999999888766655432
Q ss_pred -------------cccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCC
Q 002061 264 -------------LTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFP 330 (973)
Q Consensus 264 -------------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 330 (973)
.++|+.|+|++|.+.+..|..+..+++|+.|++++|++++..|..|..+++|+.|++++|++++..|
T Consensus 252 l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 331 (844)
T 3j0a_A 252 IKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYS 331 (844)
T ss_dssp STTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCS
T ss_pred cCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCH
Confidence 2578888888888888888888888888888888888888888888888888888888888888888
Q ss_pred ccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCccccCCCC
Q 002061 331 ENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPN 410 (973)
Q Consensus 331 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 410 (973)
..|..+++|+.|++++|++++..+..+..+.++. .+.+++|....++ .+++|+.|++++|+++ .+|.. ..+
T Consensus 332 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~-~L~Ls~N~l~~i~----~~~~L~~L~l~~N~l~-~l~~~---~~~ 402 (844)
T 3j0a_A 332 SNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQ-TLDLRDNALTTIH----FIPSIPDIFLSGNKLV-TLPKI---NLT 402 (844)
T ss_dssp CSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCC-EEEEETCCSCCCS----SCCSCSEEEEESCCCC-CCCCC---CTT
T ss_pred HHhcCCCCCCEEECCCCCCCccChhhhcCCCCCC-EEECCCCCCCccc----CCCCcchhccCCCCcc-ccccc---ccc
Confidence 8888888888888888888755544444333322 2233332222222 2555666666666665 33332 345
Q ss_pred cceEeccCCcCCCCCCC-CCCCCCCCCEEEcccCCCCCCCCh-hhhcCCCCCEEEccCCcCC-----CCccccccccccC
Q 002061 411 VGMLDFGDNDFTGGISP-LIGLSTSLSQLVLQNNRFSGELPS-ELGRLTNLERLILTNNNFS-----GKIPSALGALRQL 483 (973)
Q Consensus 411 L~~L~L~~N~l~~~~~~-~~~~~~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L 483 (973)
++.|++++|++++.... .+..+++|+.|+|++|++++..+. .+..+++|+.|+|++|.++ +..+..|.++++|
T Consensus 403 l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L 482 (844)
T 3j0a_A 403 ANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHL 482 (844)
T ss_dssp CCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCE
T ss_pred cceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccc
Confidence 66666666666654322 234667777777777777754433 3455677777777777776 3344567777788
Q ss_pred CEEEcCCcccccCCCccccccccccchhccccccccCCCccccccCCCCeeecCCCccCCCCChhhhcccCceEEccCCc
Q 002061 484 SSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLKLSSIDLSENQ 563 (973)
Q Consensus 484 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~L~~l~ls~N~ 563 (973)
+.|+|++|+|++.+|..|.++++|+.|+|++|+|++..|..+. ++|+.|+|++|+|++.+|..+. .|+.+++++|+
T Consensus 483 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~--~L~~l~l~~Np 558 (844)
T 3j0a_A 483 QVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFV--SLSVLDITHNK 558 (844)
T ss_dssp ECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCS--SCCEEEEEEEC
T ss_pred cEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhC--CcCEEEecCCC
Confidence 8888888888877777777788888888888888766666555 6788888888888877776654 46777888888
Q ss_pred cccccCcc
Q 002061 564 LSGSVPLD 571 (973)
Q Consensus 564 l~~~~p~~ 571 (973)
|.|.|+..
T Consensus 559 ~~C~c~~~ 566 (844)
T 3j0a_A 559 FICECELS 566 (844)
T ss_dssp CCCSSSCC
T ss_pred cccccccH
Confidence 88877753
No 8
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2.6e-56 Score=539.02 Aligned_cols=502 Identities=20% Similarity=0.175 Sum_probs=395.5
Q ss_pred CCCCc----ceeeeCC---------CCCceEEEeecCCCCCccccccccCCccCcEeeCCCCcccCcCChhhhCCCCCcE
Q 002061 59 SPCGF----SGITCDS---------VTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKV 125 (973)
Q Consensus 59 ~~c~w----~gv~C~~---------~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~ 125 (973)
++|.| ..|.|.. ...+++.|+|+++.+++..+..++++++|++|+|++|.+++..|..|+++++|++
T Consensus 5 ~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~ 84 (606)
T 3vq2_A 5 NPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSN 84 (606)
T ss_dssp -CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCE
Confidence 34655 3577754 2357999999999999988889999999999999999999888999999999999
Q ss_pred EEecCCcccCCCC-cccCCCCCCEEeccCccCCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccCC
Q 002061 126 LNVTGNAMVGSVP-DLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCN 204 (973)
Q Consensus 126 L~L~~n~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~ 204 (973)
|+|++|.+++.+| .|+++++|++|+|++|.+++..+..++++++|++|++++|.+....+|..++++++|++|+|++|+
T Consensus 85 L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~ 164 (606)
T 3vq2_A 85 LILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNY 164 (606)
T ss_dssp EECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSC
T ss_pred eECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCc
Confidence 9999999999855 699999999999999999988888999999999999999999877889999999999999999999
Q ss_pred CCCCCChhhhccCCCC----eeecccccccCCCchhhhccccccEEEeeccccC-CcCCccccccccccEEEe-------
Q 002061 205 LRGRIPESISELRELG----TLDICRNKISGEFPRSIRKLQKLWKIELYANNLT-GELPAELGNLTLLQEFDI------- 272 (973)
Q Consensus 205 l~~~~~~~~~~l~~L~----~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~-~~~~~~l~~l~~L~~L~L------- 272 (973)
+++..|..++.+++|+ +|++++|.+++..+..+... +|++|++++|.++ +..|..+.++++|+.+++
T Consensus 165 l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~ 243 (606)
T 3vq2_A 165 IQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKD 243 (606)
T ss_dssp CCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTT
T ss_pred ceecChhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhcccccccccccccccccc
Confidence 9998888888888776 79999999996555555544 8999999998775 223333333433333333
Q ss_pred --------------------------eccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccC
Q 002061 273 --------------------------SSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFS 326 (973)
Q Consensus 273 --------------------------s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 326 (973)
..|.+.+.+|. +..+++|+.|++++|.+.. +| .+..+++|+.|++++|.+
T Consensus 244 ~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~n~l- 319 (606)
T 3vq2_A 244 ERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIRCQL- 319 (606)
T ss_dssp SCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCC-CC-CCCTTCCCSEEEEESCCC-
T ss_pred CCcccccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccchh-hh-hccccccCCEEEcccccC-
Confidence 33333333333 4444555555555555432 22 444445555555555555
Q ss_pred CCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCC--ccccccCccccceEeccccccccCCCcc
Q 002061 327 GPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGE--VPNSYADCKTIQRLRISDNHLSGKIPDG 404 (973)
Q Consensus 327 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 404 (973)
+.+| .+ .+++|++|++++|+..+.+ .+..++++..+....|.+.+. +|..+..+++|++|+|++|.+++ +|..
T Consensus 320 ~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~ 394 (606)
T 3vq2_A 320 KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSAN 394 (606)
T ss_dssp SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCC
T ss_pred cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhh
Confidence 2344 22 4444555555544333222 111222211111112222222 26677888999999999999985 6689
Q ss_pred ccCCCCcceEeccCCcCCCCCC-CCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCC-Ccccccccccc
Q 002061 405 LWALPNVGMLDFGDNDFTGGIS-PLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSG-KIPSALGALRQ 482 (973)
Q Consensus 405 ~~~l~~L~~L~L~~N~l~~~~~-~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~ 482 (973)
+..+++|+.|++++|++.+..+ ..+..+++|++|++++|++.+..|..+.++++|++|+|++|++++ .+|..|..+++
T Consensus 395 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~ 474 (606)
T 3vq2_A 395 FMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTN 474 (606)
T ss_dssp CTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTT
T ss_pred ccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCC
Confidence 9999999999999999999887 688999999999999999999999999999999999999999997 47889999999
Q ss_pred CCEEEcCCcccccCCCccccccccccchhccccccccCCCccccccCCCCeeecCCCccCCCCChhhhccc--CceEEcc
Q 002061 483 LSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK--LSSIDLS 560 (973)
Q Consensus 483 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~--L~~l~ls 560 (973)
|++|+|++|++++..|..|+++++|+.|+|++|++++.+|..|..+++|+.|+|++|+|+ .+|..+..++ |+.|+++
T Consensus 475 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~ 553 (606)
T 3vq2_A 475 LTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLT 553 (606)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECC
T ss_pred CCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEcc
Confidence 999999999999999999999999999999999999999999999999999999999999 7887788873 9999999
Q ss_pred CCccccccCcc
Q 002061 561 ENQLSGSVPLD 571 (973)
Q Consensus 561 ~N~l~~~~p~~ 571 (973)
+|+|.|.|+..
T Consensus 554 ~N~~~c~c~~~ 564 (606)
T 3vq2_A 554 NNSVACICEHQ 564 (606)
T ss_dssp SCCCCCSSTTH
T ss_pred CCCcccCCccH
Confidence 99999999974
No 9
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.6e-54 Score=530.49 Aligned_cols=497 Identities=20% Similarity=0.170 Sum_probs=399.4
Q ss_pred CceEEEeecCCCCCccccccccCCccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCCCC-cccCCCCCCEEec
Q 002061 73 GRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP-DLSALKNLEIFDL 151 (973)
Q Consensus 73 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~-~l~~l~~L~~L~L 151 (973)
.+++.|+|+++.+++..|..++.+++|++|+|++|.+++..+..|+.+++|++|+|++|++.+.++ .|+++++|++|+|
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 128 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDL 128 (680)
T ss_dssp TTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEEC
T ss_pred CcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEEC
Confidence 467888999999988888888899999999999998885444578899999999999999888775 4888999999999
Q ss_pred cCccCCCccccccccccccceEEccCCcCCCCCCcccc--cCCCCCCEEEcccCCCCCCCChhhhcc-------------
Q 002061 152 SINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESI--GNLKNLTYLFLAHCNLRGRIPESISEL------------- 216 (973)
Q Consensus 152 s~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~--~~l~~L~~L~L~~n~l~~~~~~~~~~l------------- 216 (973)
++|.+++..|..+.++++|++|++++|.++.. .+..+ ..+++|++|++++|++++..|..+..+
T Consensus 129 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l 207 (680)
T 1ziw_A 129 SHNGLSSTKLGTQVQLENLQELLLSNNKIQAL-KSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQL 207 (680)
T ss_dssp CSSCCSCCCCCSSSCCTTCCEEECCSSCCCCB-CHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCC
T ss_pred CCCcccccCchhhcccccCCEEEccCCccccc-CHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhcccccc
Confidence 99998888888888889999999988887642 23333 345778888888887777666555433
Q ss_pred --------------CCCCeeecccccccCCCchhhhcccc--ccEEEeeccccCCcCCccccccccccEEEeeccccccc
Q 002061 217 --------------RELGTLDICRNKISGEFPRSIRKLQK--LWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGK 280 (973)
Q Consensus 217 --------------~~L~~L~L~~N~l~~~~~~~l~~l~~--L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 280 (973)
++|++|++++|++++..|..|..++. |++|+|++|++++..|..|..+++|++|++++|++.+.
T Consensus 208 ~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 287 (680)
T 1ziw_A 208 GPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHL 287 (680)
T ss_dssp HHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEE
T ss_pred ChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCcc
Confidence 33455555555555555555555543 66666666665555555555556666666665555544
Q ss_pred cCC---------------------------------ccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCC
Q 002061 281 LPE---------------------------------EIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSG 327 (973)
Q Consensus 281 ~p~---------------------------------~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 327 (973)
.|. .+..+++|+.|++++|++++..+..|..+++|+.|++++|.+..
T Consensus 288 ~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~ 367 (680)
T 1ziw_A 288 FSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSL 367 (680)
T ss_dssp CTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCC
T ss_pred ChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhh
Confidence 333 45667888888889999999888899999999999999998653
Q ss_pred C--CCcccccc--ccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCcc-ccccCccccceEeccccccccCCC
Q 002061 328 P--FPENLGRY--TALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVP-NSYADCKTIQRLRISDNHLSGKIP 402 (973)
Q Consensus 328 ~--~~~~l~~l--~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p 402 (973)
. ....+..+ ++|+.|++++|++++..|..+....++..+....|.+.+.+| ..|.++++|++|+|++|++.+..+
T Consensus 368 ~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 447 (680)
T 1ziw_A 368 RTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTR 447 (680)
T ss_dssp CEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCT
T ss_pred hhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeCh
Confidence 2 22334433 589999999999998888888777766554444566666665 689999999999999999999999
Q ss_pred ccccCCCCcceEeccCCcCC--CCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCcc------
Q 002061 403 DGLWALPNVGMLDFGDNDFT--GGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIP------ 474 (973)
Q Consensus 403 ~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p------ 474 (973)
..|..+++|+.|++++|.+. +..+..+..+++|+.|+|++|++++..+..|.++++|++|+|++|++++..+
T Consensus 448 ~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 527 (680)
T 1ziw_A 448 NSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGG 527 (680)
T ss_dssp TTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTS
T ss_pred hhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCC
Confidence 99999999999999999987 5677889999999999999999998888889999999999999999986422
Q ss_pred --ccccccccCCEEEcCCcccccCCCccccccccccchhccccccccCCCccccccCCCCeeecCCCccCCCCChhhh-c
Q 002061 475 --SALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLM-K 551 (973)
Q Consensus 475 --~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~-~ 551 (973)
..|.++++|++|+|++|+++.+.+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++.+|..+. .
T Consensus 528 ~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 607 (680)
T 1ziw_A 528 PIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPA 607 (680)
T ss_dssp CCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHH
T ss_pred cchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhccc
Confidence 2478999999999999999977777899999999999999999988888899999999999999999988887776 5
Q ss_pred cc-CceEEccCCccccccCc
Q 002061 552 LK-LSSIDLSENQLSGSVPL 570 (973)
Q Consensus 552 l~-L~~l~ls~N~l~~~~p~ 570 (973)
++ |+.+++++|+|.|.|+.
T Consensus 608 ~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 608 FRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp HTTCSEEECTTCCCCBCCCC
T ss_pred ccccCEEEccCCCcccCCcc
Confidence 54 99999999999999984
No 10
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.1e-54 Score=522.28 Aligned_cols=508 Identities=19% Similarity=0.182 Sum_probs=443.6
Q ss_pred EEeecCCCCCccccccccCCccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCCCC-cccCCCCCCEEeccCcc
Q 002061 77 EISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP-DLSALKNLEIFDLSINY 155 (973)
Q Consensus 77 ~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~-~l~~l~~L~~L~Ls~n~ 155 (973)
.++.++.+++ .+|..+.. ++++|+|++|.+++..|..|+++++|++|+|++|++.+..+ .|+++++|++|+|++|.
T Consensus 16 ~~~c~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 16 TYNCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp EEECTTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEECCCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCc
Confidence 5788888887 67776654 79999999999998889999999999999999999988765 59999999999999999
Q ss_pred CCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCch
Q 002061 156 FTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPR 235 (973)
Q Consensus 156 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 235 (973)
+++..|..|.++++|++|++++|.++... |..++++++|++|+|++|++++..+..+..+++|++|++++|++++..|.
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 171 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSID-FIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKE 171 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGG-GSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHH
T ss_pred ccccChhhhcccccccEeeccccCcccCC-cchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChh
Confidence 99999999999999999999999997532 56789999999999999999985545555699999999999999988899
Q ss_pred hhhcccccc--EEEeeccccCCcCCccccccccccEEEeeccccc--------------------------cccCCccCC
Q 002061 236 SIRKLQKLW--KIELYANNLTGELPAELGNLTLLQEFDISSNQMY--------------------------GKLPEEIGN 287 (973)
Q Consensus 236 ~l~~l~~L~--~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~--------------------------~~~p~~~~~ 287 (973)
.++.+++|+ .|++++|.+++..|..+.. .+|+.|++++|... ...+..+..
T Consensus 172 ~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~ 250 (606)
T 3t6q_A 172 DMSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEG 250 (606)
T ss_dssp HHHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGG
T ss_pred hhhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhch
Confidence 999999999 8999999999777766554 68999999887511 011122222
Q ss_pred CC--CccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCCccccccccccccccccccccccCChhhhhhhhHHH
Q 002061 288 LK--NLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLN 365 (973)
Q Consensus 288 l~--~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ 365 (973)
+. +|+.|++++|.+++..+..|+.+++|+.|++++|+++ .+|..+..+++|++|++++|++++..|..+..++.+..
T Consensus 251 l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 329 (606)
T 3t6q_A 251 LCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTH 329 (606)
T ss_dssp GGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSE
T ss_pred hhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCE
Confidence 32 7999999999999988888999999999999999999 78889999999999999999999888888888877665
Q ss_pred HHhhhccCCCCccc-cccCccccceEeccccccccCC--CccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEccc
Q 002061 366 LLALSNNFSGEVPN-SYADCKTIQRLRISDNHLSGKI--PDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQN 442 (973)
Q Consensus 366 ll~l~n~~~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~ 442 (973)
+...+|.+.+.+|. .+..+++|++|++++|.+++.. +..+..+++|+.|++++|++++..+..+..+++|++|++++
T Consensus 330 L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 409 (606)
T 3t6q_A 330 LSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAF 409 (606)
T ss_dssp EECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTT
T ss_pred EECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCC
Confidence 55556667767765 4899999999999999999766 88899999999999999999999999999999999999999
Q ss_pred CCCCCCCCh-hhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccC---CCccccccccccchhccccccc
Q 002061 443 NRFSGELPS-ELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGS---IPNEMGDCARIVDLNLARNSLS 518 (973)
Q Consensus 443 N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~ 518 (973)
|++.+..|. .+..+++|++|++++|.+++..|..+..+++|++|+|++|++++. .+..+..+++|+.|+|++|+++
T Consensus 410 n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~ 489 (606)
T 3t6q_A 410 TRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLS 489 (606)
T ss_dssp CCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCC
T ss_pred CcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccC
Confidence 999977664 489999999999999999999999999999999999999999872 3467999999999999999999
Q ss_pred cCCCccccccCCCCeeecCCCccCCCCChhhhccc-CceEEccCCccccccCcccccCCC--CccccCCCCCccCc
Q 002061 519 GNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLDFLRMGG--DGAFAGNEGLCLDQ 591 (973)
Q Consensus 519 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-L~~l~ls~N~l~~~~p~~~~~~~~--~~~~~~n~~lc~~~ 591 (973)
+..|..|..+++|+.|+|++|++++.+|..+..++ | .|+|++|++++..|..+..+.. .-.+.+||..|..+
T Consensus 490 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 490 SIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred ccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 99999999999999999999999999999999987 8 9999999999888865544332 24678998887543
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.6e-53 Score=514.61 Aligned_cols=501 Identities=20% Similarity=0.181 Sum_probs=437.2
Q ss_pred EEEeecCCCCCccccccccCCccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCCCC-cccCCCCCCEEeccCc
Q 002061 76 TEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP-DLSALKNLEIFDLSIN 154 (973)
Q Consensus 76 ~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~-~l~~l~~L~~L~Ls~n 154 (973)
..++.++.+++ .+|..+. ++|++|+|++|.+++..+..|+++++|++|+|++|.+++.++ .|+++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n 90 (606)
T 3vq2_A 14 ITYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGN 90 (606)
T ss_dssp TEEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred CceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCC
Confidence 46899999998 6777665 899999999999998888899999999999999999999866 5999999999999999
Q ss_pred cCCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccCCCCC-CCChhhhccCCCCeeecccccccCCC
Q 002061 155 YFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRG-RIPESISELRELGTLDICRNKISGEF 233 (973)
Q Consensus 155 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~ 233 (973)
.+++..|..|.++++|++|++++|.+.... |..++++++|++|+|++|++++ .+|..++++++|++|+|++|++++..
T Consensus 91 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~ 169 (606)
T 3vq2_A 91 PIQSFSPGSFSGLTSLENLVAVETKLASLE-SFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTIT 169 (606)
T ss_dssp CCCCCCTTSSTTCTTCCEEECTTSCCCCSS-SSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEEC
T ss_pred cccccChhhcCCcccCCEEEccCCcccccc-ccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecC
Confidence 999999999999999999999999997432 3679999999999999999986 57999999999999999999999888
Q ss_pred chhhhcccccc----EEEeeccccCCcCCccccccccccEEEeeccccc-cccCCccCCCCCccEEEc------------
Q 002061 234 PRSIRKLQKLW----KIELYANNLTGELPAELGNLTLLQEFDISSNQMY-GKLPEEIGNLKNLTVFQC------------ 296 (973)
Q Consensus 234 ~~~l~~l~~L~----~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~l------------ 296 (973)
+..++.+++|+ +|++++|.+++..+..+... +|++|++++|.+. +..|..+.++++|+.+++
T Consensus 170 ~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~ 248 (606)
T 3vq2_A 170 VNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLE 248 (606)
T ss_dssp TTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCS
T ss_pred hhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCccc
Confidence 88888888775 89999999996655555554 9999999999986 456666777777777665
Q ss_pred ---------------------ccCCCCCCCCCCcCCcccceeeeccCCccCCCCCccccccccccccccccccccccCCh
Q 002061 297 ---------------------FKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPK 355 (973)
Q Consensus 297 ---------------------~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~ 355 (973)
..|.+.+.+|. +..+++|+.|++++|.+.. +| .+..+++|++|++++|++ +.+|.
T Consensus 249 ~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~n~l-~~lp~ 324 (606)
T 3vq2_A 249 IFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIRCQL-KQFPT 324 (606)
T ss_dssp CCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCC-CC-CCCTTCCCSEEEEESCCC-SSCCC
T ss_pred ccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccchh-hh-hccccccCCEEEcccccC-ccccc
Confidence 66777777777 8999999999999999974 55 899999999999999999 68884
Q ss_pred hhhhhhhHHHHHhhhcc-CCCCccccccCccccceEeccccccccC--CCccccCCCCcceEeccCCcCCCCCCCCCCCC
Q 002061 356 YLCEKRKLLNLLALSNN-FSGEVPNSYADCKTIQRLRISDNHLSGK--IPDGLWALPNVGMLDFGDNDFTGGISPLIGLS 432 (973)
Q Consensus 356 ~~~~~~~ll~ll~l~n~-~~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 432 (973)
. ....+. .+.++++ ..+.+ .+..+++|++|+|++|++++. .|..+..+++|+.|++++|.+++.+ ..+..+
T Consensus 325 ~--~l~~L~-~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~-~~~~~l 398 (606)
T 3vq2_A 325 L--DLPFLK-SLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMS-ANFMGL 398 (606)
T ss_dssp C--CCSSCC-EEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEEC-CCCTTC
T ss_pred C--CCCccc-eeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccch-hhccCC
Confidence 3 444433 3444443 44433 678999999999999999866 4889999999999999999998755 778899
Q ss_pred CCCCEEEcccCCCCCCCC-hhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCccccc-CCCccccccccccch
Q 002061 433 TSLSQLVLQNNRFSGELP-SELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTG-SIPNEMGDCARIVDL 510 (973)
Q Consensus 433 ~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L 510 (973)
++|+.|++++|++.+..| ..+..+++|++|++++|++++..|..+..+++|++|++++|++++ .+|..|+.+++|+.|
T Consensus 399 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 478 (606)
T 3vq2_A 399 EELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFL 478 (606)
T ss_dssp TTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEE
Confidence 999999999999998877 789999999999999999999999999999999999999999998 489999999999999
Q ss_pred hccccccccCCCccccccCCCCeeecCCCccCCCCChhhhccc-CceEEccCCccccccCcccccCCC---CccccCCCC
Q 002061 511 NLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLDFLRMGG---DGAFAGNEG 586 (973)
Q Consensus 511 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-L~~l~ls~N~l~~~~p~~~~~~~~---~~~~~~n~~ 586 (973)
+|++|++++..|..|..+++|++|+|++|++++.+|..+..++ |+.|+|++|+++ .+|..+..+.. .-.+.+||.
T Consensus 479 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~ 557 (606)
T 3vq2_A 479 DLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSV 557 (606)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCC
T ss_pred ECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCc
Confidence 9999999999999999999999999999999998899999886 999999999999 67766666542 236799999
Q ss_pred CccCcc
Q 002061 587 LCLDQS 592 (973)
Q Consensus 587 lc~~~~ 592 (973)
.|..+.
T Consensus 558 ~c~c~~ 563 (606)
T 3vq2_A 558 ACICEH 563 (606)
T ss_dssp CCSSTT
T ss_pred ccCCcc
Confidence 987655
No 12
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.3e-51 Score=492.24 Aligned_cols=486 Identities=20% Similarity=0.211 Sum_probs=412.0
Q ss_pred CCceEEEeecCCCCCccccccccCCccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCCCC-cccCCCCCCEEe
Q 002061 72 TGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP-DLSALKNLEIFD 150 (973)
Q Consensus 72 ~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~-~l~~l~~L~~L~ 150 (973)
..+++.|+|+++.+++..+..++.+++|++|+|++|++++..|..|+++++|++|+|++|++++.++ .|+++++|++|+
T Consensus 27 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp CSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred cccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 3578999999999998888899999999999999999998778889999999999999999988775 599999999999
Q ss_pred ccCccCCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccCCCCCCCChhhhccCCC----Ceeeccc
Q 002061 151 LSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELREL----GTLDICR 226 (973)
Q Consensus 151 Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L----~~L~L~~ 226 (973)
+++|.+++..+..++++++|++|++++|.+....+|..++++++|++|++++|++++..+..++.+++| +.|++++
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~ 186 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCC
Confidence 999999977776899999999999999999877789999999999999999999998888889999998 8999999
Q ss_pred ccccCCCchhhhccccccEEEeeccccCC-cCCccccccc--------------------------------cccEEEee
Q 002061 227 NKISGEFPRSIRKLQKLWKIELYANNLTG-ELPAELGNLT--------------------------------LLQEFDIS 273 (973)
Q Consensus 227 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~-~~~~~l~~l~--------------------------------~L~~L~Ls 273 (973)
|.+++..|..+... +|++|++++|.... .++..+..++ .++.++++
T Consensus 187 n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~ 265 (570)
T 2z63_A 187 NPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 265 (570)
T ss_dssp CCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEE
T ss_pred CCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhh
Confidence 99998888777766 89999999884331 1112222222 24566666
Q ss_pred cc-ccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCCcccccccccccccccccccccc
Q 002061 274 SN-QMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGS 352 (973)
Q Consensus 274 ~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 352 (973)
+| .+.+..|..+..+++|+.|++++|.+. .+|..+..+ +|+.|++++|.+. .+|. ..+++|+.|++++|.+.+.
T Consensus 266 ~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~ 340 (570)
T 2z63_A 266 YLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNA 340 (570)
T ss_dssp ETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCB
T ss_pred cchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCccccc
Confidence 66 666677778888888888888888887 567777777 8888888888887 4444 4677888888888877643
Q ss_pred CChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCC--CccccCCCCcceEeccCCcCCCCCCCCCC
Q 002061 353 FPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKI--PDGLWALPNVGMLDFGDNDFTGGISPLIG 430 (973)
Q Consensus 353 ~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 430 (973)
++ . ..+++|++|++++|++++.. |..+..+++|++|++++|++++.++. +.
T Consensus 341 ~~------------------------~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~ 393 (570)
T 2z63_A 341 FS------------------------E--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FL 393 (570)
T ss_dssp CC------------------------C--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EE
T ss_pred cc------------------------c--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-cc
Confidence 22 1 56789999999999998654 77889999999999999999987766 88
Q ss_pred CCCCCCEEEcccCCCCCCCC-hhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccc-cCCCcccccccccc
Q 002061 431 LSTSLSQLVLQNNRFSGELP-SELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALT-GSIPNEMGDCARIV 508 (973)
Q Consensus 431 ~~~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~ 508 (973)
.+++|++|++++|++.+..| ..+.++++|++|++++|.+++..|..|..+++|++|+|++|+++ +.+|..+..+++|+
T Consensus 394 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~ 473 (570)
T 2z63_A 394 GLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLT 473 (570)
T ss_dssp TCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCC
T ss_pred ccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCC
Confidence 99999999999999997766 57899999999999999999899999999999999999999998 67899999999999
Q ss_pred chhccccccccCCCccccccCCCCeeecCCCccCCCCChhhhccc-CceEEccCCccccccCcc-----cccCCCCcccc
Q 002061 509 DLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLD-----FLRMGGDGAFA 582 (973)
Q Consensus 509 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-L~~l~ls~N~l~~~~p~~-----~~~~~~~~~~~ 582 (973)
.|+|++|++++..|..|..+++|+.|+|++|++++.+|..+..++ |+.|++++|+|+|.||.. |.+... ..+.
T Consensus 474 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~~~~-~~~~ 552 (570)
T 2z63_A 474 FLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNS-QKEQ 552 (570)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHTG-GGEE
T ss_pred EEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHHHHHHHhcc-ccCC
Confidence 999999999998899999999999999999999988888888876 999999999999999964 222221 3455
Q ss_pred CCCCCccCcc
Q 002061 583 GNEGLCLDQS 592 (973)
Q Consensus 583 ~n~~lc~~~~ 592 (973)
+.+ .|..|.
T Consensus 553 ~~~-~C~~~~ 561 (570)
T 2z63_A 553 GSA-KCSGSG 561 (570)
T ss_dssp SCC-BBTTTC
T ss_pred Cch-hhCCCC
Confidence 555 887654
No 13
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=9.6e-52 Score=492.96 Aligned_cols=485 Identities=19% Similarity=0.236 Sum_probs=316.8
Q ss_pred CCCcceeeeCCCCCceEEEeecCCCCCccccccccCCccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCCCC-
Q 002061 60 PCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP- 138 (973)
Q Consensus 60 ~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~- 138 (973)
.|.|.|| |+.. +++++ .+|+.+. ++|++|+|++|++++..|..|+.+++|++|+|++|++++.++
T Consensus 3 ~C~~~~~-c~~~----------~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~ 68 (549)
T 2z81_A 3 SCDASGV-CDGR----------SRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGD 68 (549)
T ss_dssp EECTTSE-EECT----------TSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTT
T ss_pred cCCCCce-EECC----------CCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChh
Confidence 4999998 8642 23333 3444332 456666666666665555566666666666666666655553
Q ss_pred cccCCCCCCEEeccCccCCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccCCCCCCC-ChhhhccC
Q 002061 139 DLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRI-PESISELR 217 (973)
Q Consensus 139 ~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~ 217 (973)
.|+++++|++|||++|.+++..|..|+++++|++|++++|.+....+|..++++++|++|++++|++.+.+ +..+..++
T Consensus 69 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~ 148 (549)
T 2z81_A 69 AFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLT 148 (549)
T ss_dssp TTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCC
T ss_pred hccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhccc
Confidence 35666666666666666665555556666666666666666654445555666666666666666533233 24566666
Q ss_pred CCCeeecccccccCCCchhhhccccccEEEeeccccCCcCCcc-ccccccccEEEeecccccccc--C-CccCCCCCccE
Q 002061 218 ELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAE-LGNLTLLQEFDISSNQMYGKL--P-EEIGNLKNLTV 293 (973)
Q Consensus 218 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~-l~~l~~L~~L~Ls~N~l~~~~--p-~~~~~l~~L~~ 293 (973)
+|++|++++|++++..|..++.+++|++|+++.|.+.. +|.. +..+++|++|++++|++++.. | .....+++|+.
T Consensus 149 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~ 227 (549)
T 2z81_A 149 SLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAF-LLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKK 227 (549)
T ss_dssp EEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTT-HHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCE
T ss_pred ccCeeeccCCcccccChhhhhccccCceEecccCcccc-cchhhHhhcccccEEEccCCccccccccccchhhhhhcccc
Confidence 66666666666665566666666666666666666552 2322 234566666666666665431 1 11233455666
Q ss_pred EEcccCCCCCCCC----CCcCCcccceeeeccCCccCCCC------Ccccccccccccccccccccccc-----CChhhh
Q 002061 294 FQCFKNNFSGEFP----SGFGDMRKLFAFSIYGNRFSGPF------PENLGRYTALTDVDISENQFSGS-----FPKYLC 358 (973)
Q Consensus 294 L~l~~N~l~~~~p----~~~~~l~~L~~L~l~~N~l~~~~------~~~l~~l~~L~~L~Ls~N~l~~~-----~p~~~~ 358 (973)
|++++|.+++..+ ..+..+++|+.+++++|.+.+.. ...+..+.+|+.|+++++.+... ++.. .
T Consensus 228 L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~-~ 306 (549)
T 2z81_A 228 LAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTV-Y 306 (549)
T ss_dssp EEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHH-H
T ss_pred eeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhh-h
Confidence 6666665554322 22344455555666555554321 12234444555555555544321 0100 0
Q ss_pred hhhhHHHHHhhhccCCCCccccc-cCccccceEeccccccccCCC---ccccCCCCcceEeccCCcCCCCCC--CCCCCC
Q 002061 359 EKRKLLNLLALSNNFSGEVPNSY-ADCKTIQRLRISDNHLSGKIP---DGLWALPNVGMLDFGDNDFTGGIS--PLIGLS 432 (973)
Q Consensus 359 ~~~~ll~ll~l~n~~~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~~~~~--~~~~~~ 432 (973)
.....++.+.++++..+.+|..+ ..+++|++|+|++|++++.+| ..+..+++|+.|++++|++++..+ ..+..+
T Consensus 307 ~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l 386 (549)
T 2z81_A 307 SLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTL 386 (549)
T ss_dssp HHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGC
T ss_pred hhcccceEEEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcC
Confidence 11111222233334444566555 468999999999999997664 347789999999999999987653 457889
Q ss_pred CCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhc
Q 002061 433 TSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNL 512 (973)
Q Consensus 433 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 512 (973)
++|++|+|++|+++ .+|..+..+++|++|+|++|++++ +|..+. ++|++|+|++|+|++.+ ..+++|+.|+|
T Consensus 387 ~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~L 458 (549)
T 2z81_A 387 KNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQELYI 458 (549)
T ss_dssp TTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTSC--TTCSEEECCSSCCSCCC----CCCTTCCEEEC
T ss_pred CCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-ccchhc--CCceEEECCCCChhhhc----ccCChhcEEEC
Confidence 99999999999999 688889999999999999999984 444432 68999999999999753 57899999999
Q ss_pred cccccccCCCccccccCCCCeeecCCCccCCCCChhhhccc-CceEEccCCccccccCc
Q 002061 513 ARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPL 570 (973)
Q Consensus 513 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-L~~l~ls~N~l~~~~p~ 570 (973)
++|+|+ .+|. ...+++|+.|+|++|+|++.+|..+..++ |+.|++++|+|.|.||.
T Consensus 459 s~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 459 SRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp CSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred CCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 999999 6776 56899999999999999998888888886 99999999999999994
No 14
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-50 Score=504.69 Aligned_cols=459 Identities=20% Similarity=0.211 Sum_probs=399.4
Q ss_pred CceEEEeecCCCCCccc-cccccCCccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCCC-Cc--ccCCCCCCE
Q 002061 73 GRVTEISFDNKSLSGEI-SSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSV-PD--LSALKNLEI 148 (973)
Q Consensus 73 ~~v~~l~l~~~~l~~~~-~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~-~~--l~~l~~L~~ 148 (973)
.+.+.|+|+++...+.+ |..++++++|++|+|++|.+++..|..|+.+++|++|+|++|.+++.. +. ++++++|++
T Consensus 48 ~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~ 127 (844)
T 3j0a_A 48 EQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTR 127 (844)
T ss_dssp CSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCE
T ss_pred ccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCE
Confidence 46889999999888888 678999999999999999999888999999999999999999998854 33 899999999
Q ss_pred EeccCccCCCccc-cccccccccceEEccCCcCCCCCCcccccCC--CCCCEEEcccCCCCCCCChhhhccCC------C
Q 002061 149 FDLSINYFTGRFP-RWVVNLTQLVSLSIGDNVYDEAEIPESIGNL--KNLTYLFLAHCNLRGRIPESISELRE------L 219 (973)
Q Consensus 149 L~Ls~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l--~~L~~L~L~~n~l~~~~~~~~~~l~~------L 219 (973)
|||++|.+++..+ ..|.++++|++|+|++|.+... .|..+..+ ++|+.|+|++|.+.+..|..++.+.+ |
T Consensus 128 L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~-~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L 206 (844)
T 3j0a_A 128 LDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLV-CEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVL 206 (844)
T ss_dssp EEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCC-CSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCB
T ss_pred EECCCCcccccccchhHhhCCCCCEEECCCCcCCee-CHHHcccccCCccceEECCCCccccccccchhhcCCccccCce
Confidence 9999999987765 6899999999999999998753 46777777 89999999999999988888777766 9
Q ss_pred CeeecccccccCCCchhhhcc--------------------------------------ccccEEEeeccccCCcCCccc
Q 002061 220 GTLDICRNKISGEFPRSIRKL--------------------------------------QKLWKIELYANNLTGELPAEL 261 (973)
Q Consensus 220 ~~L~L~~N~l~~~~~~~l~~l--------------------------------------~~L~~L~L~~N~l~~~~~~~l 261 (973)
++|+|++|++++..+..+... ++|++|+|++|.+++..+..|
T Consensus 207 ~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~ 286 (844)
T 3j0a_A 207 EILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVF 286 (844)
T ss_dssp SEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCS
T ss_pred eEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhh
Confidence 999999998887666555432 689999999999998889999
Q ss_pred cccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCCccccccccccc
Q 002061 262 GNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTD 341 (973)
Q Consensus 262 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~ 341 (973)
..+++|+.|+|++|++++..|..|..+++|++|++++|++++..|..|..+++|+.|++++|++++..+..|..+++|++
T Consensus 287 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 366 (844)
T 3j0a_A 287 ETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQT 366 (844)
T ss_dssp SSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCE
T ss_pred hcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCE
Confidence 99999999999999999999999999999999999999999988999999999999999999999888889999999999
Q ss_pred cccccccccccCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCC-ccccCCCCcceEeccCCc
Q 002061 342 VDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIP-DGLWALPNVGMLDFGDND 420 (973)
Q Consensus 342 L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~ 420 (973)
|+|++|.+++ ++. .+. ++.+.+++|....+|.. ..+++.|++++|++++... ..+..+++|+.|+|++|+
T Consensus 367 L~Ls~N~l~~-i~~----~~~-L~~L~l~~N~l~~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~ 437 (844)
T 3j0a_A 367 LDLRDNALTT-IHF----IPS-IPDIFLSGNKLVTLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNR 437 (844)
T ss_dssp EEEETCCSCC-CSS----CCS-CSEEEEESCCCCCCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCC
T ss_pred EECCCCCCCc-ccC----CCC-cchhccCCCCccccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCc
Confidence 9999999984 332 122 23344555555566654 4679999999999986432 235589999999999999
Q ss_pred CCCCCCC-CCCCCCCCCEEEcccCCCC-----CCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccc
Q 002061 421 FTGGISP-LIGLSTSLSQLVLQNNRFS-----GELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALT 494 (973)
Q Consensus 421 l~~~~~~-~~~~~~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 494 (973)
+++..+. .+..+++|+.|+|++|.++ +..+..|.++++|+.|+|++|++++..|..|.++++|+.|+|++|+|+
T Consensus 438 l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 517 (844)
T 3j0a_A 438 FSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLT 517 (844)
T ss_dssp CCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCS
T ss_pred ccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCC
Confidence 9977654 4566899999999999997 445567889999999999999999999999999999999999999999
Q ss_pred cCCCccccccccccchhccccccccCCCccccccCCCCeeecCCCccCCCCC
Q 002061 495 GSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIP 546 (973)
Q Consensus 495 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 546 (973)
+.++..+. ++|+.|+|++|+|++.+|..| .+|+.|+|++|++....+
T Consensus 518 ~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~---~~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 518 VLSHNDLP--ANLEILDISRNQLLAPNPDVF---VSLSVLDITHNKFICECE 564 (844)
T ss_dssp SCCCCCCC--SCCCEEEEEEECCCCCCSCCC---SSCCEEEEEEECCCCSSS
T ss_pred ccChhhhh--ccccEEECCCCcCCCCChhHh---CCcCEEEecCCCcccccc
Confidence 88888776 899999999999999999876 479999999999987554
No 15
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.5e-51 Score=444.26 Aligned_cols=261 Identities=22% Similarity=0.317 Sum_probs=213.2
Q ss_pred cCCcccCcccccCceEEEEEEec-----CCCcEEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeE
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLK-----KNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~-----~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
.++++.++||+|+||+||+|++. .+++.||||+++.. ...++|.+|+.++++++|||||++++++.+++..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 45677889999999999999974 35778999998653 34578999999999999999999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhcC-----------CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCC
Q 002061 748 LVLEYMPNGNLFQALHKRVKE-----------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY 816 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~-----------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~ 816 (973)
+|||||++|+|.+++..+... ....++|..+..++.|||+||+||| +++||||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCC
Confidence 999999999999999754211 1235899999999999999999999 78999999999999999999
Q ss_pred CeEEecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHH
Q 002061 817 EPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWV 895 (973)
Q Consensus 817 ~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~ 895 (973)
.+||+|||+++...............||++|||||++.++.|+.++|||||||++|||+| |+.||.+. ...++...+
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~--~~~~~~~~i 260 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY--SNQDVVEMI 260 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTC--CHHHHHHHH
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCC--CHHHHHHHH
Confidence 999999999987654433333445679999999999999999999999999999999998 89999754 222222222
Q ss_pred HHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002061 896 STHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
.. ... ...+..++..+.+++.+||+.||++|||++||+++|+.+.+
T Consensus 261 ~~----~~~----------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~n 306 (308)
T 4gt4_A 261 RN----RQV----------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGN 306 (308)
T ss_dssp HT----TCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCC
T ss_pred Hc----CCC----------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhccC
Confidence 21 110 01122344568899999999999999999999999997754
No 16
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.2e-51 Score=447.74 Aligned_cols=262 Identities=24% Similarity=0.361 Sum_probs=205.7
Q ss_pred cCCcccCcccccCceEEEEEEec-----CCCcEEEEEeeecc--ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEE
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLK-----KNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~-----~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
.+|.+.++||+|+||+||+|++. .+++.||||+++.. ...++|.+|++++++++|||||++++++.+++..|+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45677889999999999999875 35788999998763 345679999999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcC----------CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCe
Q 002061 749 VLEYMPNGNLFQALHKRVKE----------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEP 818 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 818 (973)
|||||++|+|.++++.+... ....++|.++..++.|||+||+||| +++||||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcE
Confidence 99999999999999864221 2346899999999999999999999 7899999999999999999999
Q ss_pred EEecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHH
Q 002061 819 KIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVST 897 (973)
Q Consensus 819 kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~ 897 (973)
||+|||+++...............||+.|||||++.+..|+.++|||||||++|||+| |+.||... ...+....+..
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~--~~~~~~~~i~~ 275 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL--SNTEAIDCITQ 275 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSS--CHHHHHHHHHH
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCC--CHHHHHHHHHc
Confidence 9999999987655443333445679999999999999999999999999999999999 89999754 11222222211
Q ss_pred HhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCC
Q 002061 898 HLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPC 956 (973)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 956 (973)
... ...+..+.+++.+++.+||+.||++|||++||+++|+.+...
T Consensus 276 ---g~~-----------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 276 ---GRE-----------LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp ---TCC-----------CCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred ---CCC-----------CCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 110 011123345688999999999999999999999999987544
No 17
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.3e-51 Score=444.51 Aligned_cols=261 Identities=26% Similarity=0.396 Sum_probs=212.0
Q ss_pred cCCcccCcccccCceEEEEEEec-----CCCcEEEEEeeecc--ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEE
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLK-----KNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~-----~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
++|.+.+.||+|+||+||+|++. .++..||||+++.. ...++|.+|++++++++|||||++++++.+++..|+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 46788899999999999999975 35788999998763 345679999999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhh--------cCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEE
Q 002061 749 VLEYMPNGNLFQALHKRV--------KEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKI 820 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~--------~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 820 (973)
|||||++|+|.++++.+. ......++|.++..++.|||+||+||| +++||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEE
Confidence 999999999999998642 123456999999999999999999999 789999999999999999999999
Q ss_pred ecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHh
Q 002061 821 ADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHL 899 (973)
Q Consensus 821 ~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~ 899 (973)
+|||+|+...............||+.|||||++.+..|+.++|||||||++|||+| |+.||... ...++...+...
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~--~~~~~~~~i~~~- 246 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL--SNNEVIECITQG- 246 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS--CHHHHHHHHHHT-
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCC--CHHHHHHHHHcC-
Confidence 99999987654433333334568999999999999999999999999999999999 89999754 122222222111
Q ss_pred ccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002061 900 NNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
.. ...+..++.++.+++.+||+.||++|||++||.+.|+++..
T Consensus 247 --~~-----------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 247 --RV-----------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp --CC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --CC-----------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 10 01112334568899999999999999999999999987653
No 18
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-50 Score=434.17 Aligned_cols=260 Identities=29% Similarity=0.431 Sum_probs=202.4
Q ss_pred cCCcccCcccccCceEEEEEEecCCCcEEEEEeeec----cccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEE
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
+++++.++||+|+||+||+|++.. .||||+++. ....+.|.+|++++++++|||||++++++.+ +..|+|||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 467889999999999999998763 699998864 2345679999999999999999999998754 56899999
Q ss_pred ccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccC
Q 002061 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
||++|+|.++++.. ...++|..+..|+.|||+||+||| +++||||||||+|||+++++.+||+|||+|+....
T Consensus 112 y~~gGsL~~~l~~~----~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 112 WCEGSSLYKHLHVQ----ETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp CCSSCBHHHHHHTS----CCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred cCCCCCHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence 99999999999753 346899999999999999999999 78999999999999999999999999999987654
Q ss_pred CCCcccccccCCcccccccccccc---CCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchh
Q 002061 832 SPKVSDYSCFAGTHGYIAPELAYT---CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
...........||+.|||||++.+ ..|+.++|||||||++|||+||+.||.... ... .+.........
T Consensus 185 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~--~~~---~~~~~~~~~~~---- 255 (307)
T 3omv_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN--NRD---QIIFMVGRGYA---- 255 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC--CHH---HHHHHHHTTCC----
T ss_pred CCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCC--hHH---HHHHHHhcCCC----
Confidence 433333445689999999999864 458999999999999999999999996531 111 11111111100
Q ss_pred ccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCC
Q 002061 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCT 957 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 957 (973)
.+.. ......++..+.+++.+||+.||++|||+.||+++|+.++...
T Consensus 256 -~p~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 256 -SPDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp -CCCS-TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred -CCCc-ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 0100 1112234456889999999999999999999999998876543
No 19
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.9e-50 Score=440.80 Aligned_cols=251 Identities=22% Similarity=0.330 Sum_probs=204.3
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
+++|++.+.||+|+||+||+|++..+|+.||||++... ...+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 46899999999999999999999999999999998753 34567899999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccccc
Q 002061 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
|||+||+|.+++... ....+++..+..++.||+.||+||| +++||||||||+|||++.+|.+||+|||+|+...
T Consensus 103 Ey~~gg~L~~~i~~~---~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 176 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQ---KGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN 176 (350)
T ss_dssp ECCTTCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCC
T ss_pred eCCCCCcHHHHHHHc---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeec
Confidence 999999999999753 2345788899999999999999999 7899999999999999999999999999998654
Q ss_pred CCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhcc
Q 002061 831 NSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
... ......+||+.|||||++.+..|+.++||||+||++|||++|+.||... +....+........
T Consensus 177 ~~~--~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~-----~~~~~~~~i~~~~~------- 242 (350)
T 4b9d_A 177 STV--ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG-----SMKNLVLKIISGSF------- 242 (350)
T ss_dssp HHH--HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS-----SHHHHHHHHHHTCC-------
T ss_pred CCc--ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-----CHHHHHHHHHcCCC-------
Confidence 321 1123457999999999999999999999999999999999999999653 22222222221111
Q ss_pred ccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
+ ........++.+++.+||+.||++|||+.|+++|
T Consensus 243 ~----~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 243 P----PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp C----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred C----CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0 0111234568899999999999999999999875
No 20
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=6.5e-50 Score=435.93 Aligned_cols=249 Identities=24% Similarity=0.361 Sum_probs=209.1
Q ss_pred cCCcccCcccccCceEEEEEEecCCCcEEEEEeeec--cccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEEcc
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK--GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
..|+..++||+|+||+||+|+++.+|+.||||++.. ....+.+.+|++++++++|||||+++++|.+++..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 468888999999999999999999999999999865 344566889999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccCCC
Q 002061 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
+||+|.+++... .+++..+..++.||+.||+||| +++||||||||+|||++.+|.+||+|||+|+......
T Consensus 154 ~gg~L~~~l~~~------~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 224 (346)
T 4fih_A 154 EGGALTDIVTHT------RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 224 (346)
T ss_dssp TTEEHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred CCCcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC
Confidence 999999999752 4899999999999999999999 7899999999999999999999999999998765432
Q ss_pred CcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhccccc
Q 002061 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
. .....+||+.|||||++.+..|+.++||||+||++|||++|+.||... +............. +.
T Consensus 225 ~--~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~-----~~~~~~~~i~~~~~-------~~- 289 (346)
T 4fih_A 225 P--RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE-----PPLKAMKMIRDNLP-------PR- 289 (346)
T ss_dssp C--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-----CHHHHHHHHHHSSC-------CC-
T ss_pred C--cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-----CHHHHHHHHHcCCC-------CC-
Confidence 2 233468999999999999999999999999999999999999999653 11122111111111 00
Q ss_pred cCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
..........+.+++.+||+.||++|||+.|+++|
T Consensus 290 -~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 290 -LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp -CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -CCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 01122334568899999999999999999999987
No 21
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=4.4e-50 Score=430.58 Aligned_cols=247 Identities=24% Similarity=0.339 Sum_probs=210.2
Q ss_pred cCCcccCcccccCceEEEEEEecCCCcEEEEEeeec-----cccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEE
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~-----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
++|++.+.||+|+||+||+|++..+++.||||++.+ ....+.+.+|++++++++|||||++++++++++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 569999999999999999999999999999999875 345677899999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccccc
Q 002061 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||++||+|.+++.+. ..+++..+..++.||+.||+||| +++||||||||+|||++.++.+||+|||+|+...
T Consensus 112 Ey~~gG~L~~~i~~~-----~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~ 183 (311)
T 4aw0_A 112 SYAKNGELLKYIRKI-----GSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183 (311)
T ss_dssp CCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecC
Confidence 999999999999864 35899999999999999999999 7899999999999999999999999999998776
Q ss_pred CCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhcc
Q 002061 831 NSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
...........+||+.|||||++.+..|+.++||||+||++|||++|+.||... +..............+
T Consensus 184 ~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~-----~~~~~~~~i~~~~~~~----- 253 (311)
T 4aw0_A 184 PESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-----NEGLIFAKIIKLEYDF----- 253 (311)
T ss_dssp TTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHTCCCC-----
T ss_pred CCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHcCCCCC-----
Confidence 544434445578999999999999999999999999999999999999999653 2222222222211111
Q ss_pred ccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHH
Q 002061 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVV 947 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl 947 (973)
+.....++.+++.+|++.||++|||+.|++
T Consensus 254 -------p~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 254 -------PEKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp -------CTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred -------CcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 112234678899999999999999999863
No 22
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.6e-49 Score=470.26 Aligned_cols=457 Identities=21% Similarity=0.255 Sum_probs=395.9
Q ss_pred EEEeecCCCCCccccccccCCccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCCCC-cccCCCCCCEEeccCc
Q 002061 76 TEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP-DLSALKNLEIFDLSIN 154 (973)
Q Consensus 76 ~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~-~l~~l~~L~~L~Ls~n 154 (973)
+.+|+++++++ .+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|++++.++ .|+++++|++|||++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 46899999999 6888777 899999999999998778899999999999999999998855 6999999999999999
Q ss_pred cCCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccCCCCCCCChhhhccCCC--Ceeecccccc--c
Q 002061 155 YFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELREL--GTLDICRNKI--S 230 (973)
Q Consensus 155 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~L~~N~l--~ 230 (973)
+++ .+|.. .+++|++|++++|.+....+|..++++++|++|+|++|++++ ..+..+++| ++|++++|++ +
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 999 56666 899999999999999877789999999999999999999986 567888888 9999999999 8
Q ss_pred CCCchhhhccc-cccEEEeeccccCCcCCc-cccccccccEEEeeccc-------cccccCCccCCCCCccEEEcccCCC
Q 002061 231 GEFPRSIRKLQ-KLWKIELYANNLTGELPA-ELGNLTLLQEFDISSNQ-------MYGKLPEEIGNLKNLTVFQCFKNNF 301 (973)
Q Consensus 231 ~~~~~~l~~l~-~L~~L~L~~N~l~~~~~~-~l~~l~~L~~L~Ls~N~-------l~~~~p~~~~~l~~L~~L~l~~N~l 301 (973)
+..|..+..+. +...+++++|.+.+.++. .+.++++|+.|++++|. +.+.+| .+..+++|+.|++++|.+
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccccc
Confidence 88898888876 455678889998876654 57889999999999998 777766 789999999999999998
Q ss_pred CCCCCCCcC---CcccceeeeccCCccCCCCCccc-----cccccccccccccccccccCC-hhhhhhhhHHHHHhhhcc
Q 002061 302 SGEFPSGFG---DMRKLFAFSIYGNRFSGPFPENL-----GRYTALTDVDISENQFSGSFP-KYLCEKRKLLNLLALSNN 372 (973)
Q Consensus 302 ~~~~p~~~~---~l~~L~~L~l~~N~l~~~~~~~l-----~~l~~L~~L~Ls~N~l~~~~p-~~~~~~~~ll~ll~l~n~ 372 (973)
++..+..+. ..++|+.|++++|++++.+|..+ +.+++|+.+++++|.+ .+| ..++...
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~----------- 299 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIF----------- 299 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHH-----------
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhccc-----------
Confidence 764332211 24589999999999999999998 9999999999999999 555 3333221
Q ss_pred CCCCccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCC--CCC
Q 002061 373 FSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSG--ELP 450 (973)
Q Consensus 373 ~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~--~~p 450 (973)
...+|+.|++++|.+.+.. .+..+++|++|++++|++++..+..++.+++|++|+|++|++++ .+|
T Consensus 300 ----------~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~ 367 (520)
T 2z7x_B 300 ----------SNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIA 367 (520)
T ss_dssp ----------HTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHH
T ss_pred ----------ccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccch
Confidence 1157999999999987432 22688999999999999999889999999999999999999996 556
Q ss_pred hhhhcCCCCCEEEccCCcCCCCccc-cccccccCCEEEcCCcccccCCCccccccccccchhccccccccCCCccccccC
Q 002061 451 SELGRLTNLERLILTNNNFSGKIPS-ALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLS 529 (973)
Q Consensus 451 ~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 529 (973)
..+..+++|++|+|++|++++.+|. .+..+++|++|+|++|++++..|..+. ++|+.|+|++|+|+ .+|..+..++
T Consensus 368 ~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~ 444 (520)
T 2z7x_B 368 EMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLE 444 (520)
T ss_dssp HHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCT
T ss_pred HHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCC
Confidence 7899999999999999999985665 588999999999999999988877765 79999999999999 7888888999
Q ss_pred CCCeeecCCCccCCCCChh-hhccc-CceEEccCCccccccCcc
Q 002061 530 SLNALNLSGNKLTGSIPDN-LMKLK-LSSIDLSENQLSGSVPLD 571 (973)
Q Consensus 530 ~L~~L~L~~N~l~~~~p~~-l~~l~-L~~l~ls~N~l~~~~p~~ 571 (973)
+|+.|+|++|+|+ .+|.. +..++ |+.|++++|+|+|.|+..
T Consensus 445 ~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 487 (520)
T 2z7x_B 445 ALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 487 (520)
T ss_dssp TCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHHHH
T ss_pred CCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCCch
Confidence 9999999999999 56665 77775 999999999999999854
No 23
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.1e-49 Score=430.79 Aligned_cols=253 Identities=21% Similarity=0.247 Sum_probs=206.6
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEEccC
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
...|+..++||+|+||+||+|+++.+|+.||||+++.+.. ..+|++++++++|||||++++++.+++..|+|||||+
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~---~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~ 133 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE 133 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh---HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccC
Confidence 4567888999999999999999999999999999976432 2479999999999999999999999999999999999
Q ss_pred CCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCC-CeEEecccCcccccCCC
Q 002061 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY-EPKIADFGVAKIAENSP 833 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfgl~~~~~~~~ 833 (973)
||+|.++++.. ..+++..+..++.||+.||+||| +++||||||||+|||++.+| .+||+|||+|+......
T Consensus 134 gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~ 205 (336)
T 4g3f_A 134 GGSLGQLIKQM-----GCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 205 (336)
T ss_dssp TCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCC
Confidence 99999999864 35899999999999999999999 88999999999999999987 69999999998775432
Q ss_pred Ccc---cccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhcc
Q 002061 834 KVS---DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 834 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ......+.. ......
T Consensus 206 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~--~~~~~~i~~---~~~~~~---- 276 (336)
T 4g3f_A 206 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR--GPLCLKIAS---EPPPIR---- 276 (336)
T ss_dssp --------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCC--SCCHHHHHH---SCCGGG----
T ss_pred cccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH--HHHHHHHHc---CCCCch----
Confidence 211 22335799999999999999999999999999999999999999976422 111111111 111000
Q ss_pred ccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002061 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
..+......+.+++.+||++||.+|||+.|+++++..
T Consensus 277 -----~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~ 313 (336)
T 4g3f_A 277 -----EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGK 313 (336)
T ss_dssp -----GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -----hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence 1122334568889999999999999999999998865
No 24
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=5.1e-49 Score=420.82 Aligned_cols=244 Identities=25% Similarity=0.327 Sum_probs=197.5
Q ss_pred cccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEe----CCeeEEEE
Q 002061 679 EEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLK----GGSSFLVL 750 (973)
Q Consensus 679 ~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~----~~~~~lv~ 750 (973)
++.++||+|+||+||+|++..+++.||||++... ...+.|.+|++++++++|||||+++++|.+ +...|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 5667899999999999999999999999998653 345678999999999999999999999865 34689999
Q ss_pred EccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCC--eEecCCCCCCeeecC-CCCeEEecccCcc
Q 002061 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPP--IIHRDIKSSNILLDE-DYEPKIADFGVAK 827 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~Dlkp~Nill~~-~~~~kl~Dfgl~~ 827 (973)
|||++|+|.+++.+. ..+++..+..++.||+.||+||| +++ ||||||||+|||++. ++.+||+|||+|+
T Consensus 109 Ey~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~ 180 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp ECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred eCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence 999999999999864 35889999999999999999999 666 999999999999985 7999999999997
Q ss_pred cccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccch
Q 002061 828 IAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
..... .....+||+.|||||++.+ +|+.++|||||||++|||+||+.||.+.. .............. .
T Consensus 181 ~~~~~----~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~----~~~~~~~~i~~~~~-~-- 248 (290)
T 3fpq_A 181 LKRAS----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ----NAAQIYRRVTSGVK-P-- 248 (290)
T ss_dssp GCCTT----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS----SHHHHHHHHTTTCC-C--
T ss_pred eCCCC----ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCC----cHHHHHHHHHcCCC-C--
Confidence 54322 2234679999999999865 69999999999999999999999996431 12222221111111 0
Q ss_pred hccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
...+....+++.+++.+||+.||++|||+.|+++|
T Consensus 249 -------~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 249 -------ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -------GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -------CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 01111123457889999999999999999999986
No 25
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.1e-48 Score=463.96 Aligned_cols=476 Identities=20% Similarity=0.230 Sum_probs=393.9
Q ss_pred EeecCCCCCccccccccCCccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCCCC-cccCCCCCCEEeccCccC
Q 002061 78 ISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP-DLSALKNLEIFDLSINYF 156 (973)
Q Consensus 78 l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~-~l~~l~~L~~L~Ls~n~l 156 (973)
++.++.+++ .+|..+. +++++|+|++|.+++..+..|..+++|++|+|++|++++.++ .|+++++|++|+|++|.+
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 88 (570)
T 2z63_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (570)
T ss_dssp EECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcC
Confidence 334444554 4555443 579999999999998888899999999999999999998876 489999999999999999
Q ss_pred CCccccccccccccceEEccCCcCCCCCCcc-cccCCCCCCEEEcccCCCCC-CCChhhhccCCCCeeecccccccCCCc
Q 002061 157 TGRFPRWVVNLTQLVSLSIGDNVYDEAEIPE-SIGNLKNLTYLFLAHCNLRG-RIPESISELRELGTLDICRNKISGEFP 234 (973)
Q Consensus 157 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~-~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~ 234 (973)
++..|..|.++++|++|++++|.+.. +|. .++++++|++|+|++|.+++ .+|..|+++++|++|++++|++++..+
T Consensus 89 ~~~~~~~~~~l~~L~~L~L~~n~l~~--l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~ 166 (570)
T 2z63_A 89 QSLALGAFSGLSSLQKLVAVETNLAS--LENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (570)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCC--STTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECG
T ss_pred CccCHhhhcCcccccccccccccccc--CCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecH
Confidence 98888999999999999999999874 343 58999999999999999997 479999999999999999999998888
Q ss_pred hhhhccccc----cEEEeeccccCCcCCccccccccccEEEeecccccc-ccCCccCCCCC-------------------
Q 002061 235 RSIRKLQKL----WKIELYANNLTGELPAELGNLTLLQEFDISSNQMYG-KLPEEIGNLKN------------------- 290 (973)
Q Consensus 235 ~~l~~l~~L----~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~------------------- 290 (973)
..++.+++| ++|++++|.+++..|..+..+ +|+.|++++|.... .++..+..+++
T Consensus 167 ~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~ 245 (570)
T 2z63_A 167 TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEK 245 (570)
T ss_dssp GGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEE
T ss_pred HHccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhh
Confidence 899999999 899999999998888777766 89999999984321 12222333333
Q ss_pred -------------ccEEEcccC-CCCCCCCCCcCCcccceeeeccCCccCCCCCccccccccccccccccccccccCChh
Q 002061 291 -------------LTVFQCFKN-NFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKY 356 (973)
Q Consensus 291 -------------L~~L~l~~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~ 356 (973)
++.++++.+ .+.+..|..+..+++|+.|++++|.++ .+|..+..+ +|++|++++|.+.
T Consensus 246 ~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~------ 317 (570)
T 2z63_A 246 FDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG------ 317 (570)
T ss_dssp CCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS------
T ss_pred cchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc------
Confidence 344455555 555566666777777777777777776 466666666 7777777777665
Q ss_pred hhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCC--CCCCCCCCC
Q 002061 357 LCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGI--SPLIGLSTS 434 (973)
Q Consensus 357 ~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~~~~ 434 (973)
.+|. ..+++|++|++++|.+.+..+. ..+++|+.|++++|++++.. +..+..+++
T Consensus 318 -------------------~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~ 374 (570)
T 2z63_A 318 -------------------QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTS 374 (570)
T ss_dssp -------------------SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSC
T ss_pred -------------------ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCc
Confidence 3343 4678999999999999876665 78999999999999998764 556778899
Q ss_pred CCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCcc-ccccccccCCEEEcCCcccccCCCccccccccccchhcc
Q 002061 435 LSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIP-SALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLA 513 (973)
Q Consensus 435 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 513 (973)
|++|++++|++.+..+. +..+++|++|++++|.+++..| ..+..+++|++|++++|++++..|..|.++++|+.|+|+
T Consensus 375 L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 453 (570)
T 2z63_A 375 LKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMA 453 (570)
T ss_dssp CCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECT
T ss_pred cCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECc
Confidence 99999999999965444 9999999999999999997766 578999999999999999999999999999999999999
Q ss_pred ccccc-cCCCccccccCCCCeeecCCCccCCCCChhhhccc-CceEEccCCccccccCcccccCCC--CccccCCCCCcc
Q 002061 514 RNSLS-GNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLDFLRMGG--DGAFAGNEGLCL 589 (973)
Q Consensus 514 ~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-L~~l~ls~N~l~~~~p~~~~~~~~--~~~~~~n~~lc~ 589 (973)
+|+++ +.+|..|..+++|+.|+|++|++++.+|..+..++ |+.|++++|++++..|..|..+.. .-.+.+|+..|.
T Consensus 454 ~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 533 (570)
T 2z63_A 454 GNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 533 (570)
T ss_dssp TCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCC
Confidence 99998 67999999999999999999999988899998886 999999999999987766655443 235688887775
Q ss_pred Cc
Q 002061 590 DQ 591 (973)
Q Consensus 590 ~~ 591 (973)
.+
T Consensus 534 ~~ 535 (570)
T 2z63_A 534 CP 535 (570)
T ss_dssp TT
T ss_pred Cc
Confidence 44
No 26
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=9.3e-49 Score=414.89 Aligned_cols=248 Identities=26% Similarity=0.335 Sum_probs=194.6
Q ss_pred HHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEE
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
.+++|++.+.||+|+||+||+|++..+++.||||++.+. ...+.+.+|++++++++|||||++++++.+++..|+
T Consensus 11 ~ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~i 90 (275)
T 3hyh_A 11 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM 90 (275)
T ss_dssp ---CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred EeeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 357899999999999999999999999999999998652 345678999999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccc
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+ +|+|.+++..+ ..+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+|+.
T Consensus 91 vmEy~-~g~L~~~l~~~-----~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~ 161 (275)
T 3hyh_A 91 VIEYA-GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNI 161 (275)
T ss_dssp EEECC-CEEHHHHHHHS-----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC--
T ss_pred EEeCC-CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCee
Confidence 99999 78999999753 35899999999999999999999 78999999999999999999999999999986
Q ss_pred ccCCCCcccccccCCccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccch
Q 002061 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKV-SEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
..... ......||+.|||||++.+..+ +.++||||+||++|||++|+.||... +...............
T Consensus 162 ~~~~~---~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~-----~~~~~~~~i~~~~~~~-- 231 (275)
T 3hyh_A 162 MTDGN---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE-----SIPVLFKNISNGVYTL-- 231 (275)
T ss_dssp ----------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHTCCCC--
T ss_pred cCCCC---ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHcCCCCC--
Confidence 64332 2234679999999999998876 57999999999999999999999653 2222222222111111
Q ss_pred hccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
+....+.+.+++.+|++.||++|||+.|+++|-
T Consensus 232 ----------p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp 264 (275)
T 3hyh_A 232 ----------PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDD 264 (275)
T ss_dssp ----------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCH
T ss_pred ----------CCCCCHHHHHHHHHHccCChhHCcCHHHHHcCc
Confidence 112234678899999999999999999999863
No 27
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=9.5e-49 Score=437.32 Aligned_cols=249 Identities=24% Similarity=0.369 Sum_probs=209.1
Q ss_pred cCCcccCcccccCceEEEEEEecCCCcEEEEEeeec--cccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEEcc
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK--GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
..|+..++||+|+||+||+|+++.+|+.||||++.. ....+.+.+|++++++++|||||+++++|.+++..|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 568999999999999999999999999999999865 344567899999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccCCC
Q 002061 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
+||+|.+++... .+++..+..++.||+.||+||| +++||||||||+|||++.+|.+||+|||+|+......
T Consensus 231 ~gG~L~~~i~~~------~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~ 301 (423)
T 4fie_A 231 EGGALTDIVTHT------RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 301 (423)
T ss_dssp TTEEHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC
T ss_pred CCCcHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC
Confidence 999999999743 4899999999999999999999 7899999999999999999999999999998765432
Q ss_pred CcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhccccc
Q 002061 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
. .....+||+.|||||++.+..|+.++|||||||++|||++|+.||... +.............. ..
T Consensus 302 ~--~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~-----~~~~~~~~i~~~~~~-------~~ 367 (423)
T 4fie_A 302 P--RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE-----PPLKAMKMIRDNLPP-------RL 367 (423)
T ss_dssp C--CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-----CHHHHHHHHHHSCCC-------CC
T ss_pred c--cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-----CHHHHHHHHHcCCCC-------CC
Confidence 2 233467999999999999999999999999999999999999999653 111221111111110 00
Q ss_pred cCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.........+.+|+.+||+.||++|||+.|+++|
T Consensus 368 --~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 368 --KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp --SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred --cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1112234568899999999999999999999986
No 28
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=6.1e-49 Score=474.09 Aligned_cols=453 Identities=19% Similarity=0.268 Sum_probs=365.1
Q ss_pred ccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCCCCccc-----------CCCCCCEEeccCccCCCccccccc
Q 002061 97 QSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLS-----------ALKNLEIFDLSINYFTGRFPRWVV 165 (973)
Q Consensus 97 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~-----------~l~~L~~L~Ls~n~l~~~~~~~~~ 165 (973)
.+++.|+|++|+++|.+|.+|++|++|++|+|++|.+......++ .+.+|+ ++++.|.+.+..|..+.
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~-l~l~~~~l~~~~~~~~~ 159 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMR-MHYQKTFVDYDPREDFS 159 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHH-THHHHHHTCCCGGGGSC
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHH-hhHHHhhhccCchhhHH
Confidence 478899999999999999999999999999999998732111111 145677 88999999888887776
Q ss_pred c-ccccceEEccCCcCCCCCCcccccCCCCCCEEEc--ccCCCCCCCChhhhccCCCCeeecccccccCC----------
Q 002061 166 N-LTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFL--AHCNLRGRIPESISELRELGTLDICRNKISGE---------- 232 (973)
Q Consensus 166 ~-l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L--~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---------- 232 (973)
. +..+..+++....+.. .....++.+.+ .+|++++ +|..++++++|++|+|++|++++.
T Consensus 160 ~~~~~l~~~~l~~~~~~~-------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~ 231 (636)
T 4eco_A 160 DLIKDCINSDPQQKSIKK-------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENEN 231 (636)
T ss_dssp HHHHHHHHHCTTSCCCCC-------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTT
T ss_pred HHHHHHhhcCcccccccc-------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccc
Confidence 4 3445555554433321 11122333333 3578887 888888888888888888888875
Q ss_pred -------Cchhhh--ccccccEEEeeccccCCcCCccccccccccEEEeeccc-ccc-ccCCccCCC------CCccEEE
Q 002061 233 -------FPRSIR--KLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQ-MYG-KLPEEIGNL------KNLTVFQ 295 (973)
Q Consensus 233 -------~~~~l~--~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l------~~L~~L~ 295 (973)
+|..++ ++++|++|+|++|.+.+.+|..|+++++|++|+|++|+ +++ .+|..++++ ++|++|+
T Consensus 232 ~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~ 311 (636)
T 4eco_A 232 SEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIY 311 (636)
T ss_dssp SHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEE
T ss_pred cchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEE
Confidence 888888 88899999999998888888888888999999999998 887 788888776 8899999
Q ss_pred cccCCCCCCCCC--CcCCcccceeeeccCCccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccC
Q 002061 296 CFKNNFSGEFPS--GFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNF 373 (973)
Q Consensus 296 l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~ 373 (973)
+++|+++ .+|. .++.+++|+.|++++|+++|.+| .++.+++|++|+|++|+++ .
T Consensus 312 L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~--------------------- 367 (636)
T 4eco_A 312 IGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-E--------------------- 367 (636)
T ss_dssp CCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-E---------------------
T ss_pred CCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-c---------------------
Confidence 9999988 7887 88889999999999999988888 8888999999999999887 3
Q ss_pred CCCccccccCccc-cceEeccccccccCCCccccCCC--CcceEeccCCcCCCCCCCCCC-------CCCCCCEEEcccC
Q 002061 374 SGEVPNSYADCKT-IQRLRISDNHLSGKIPDGLWALP--NVGMLDFGDNDFTGGISPLIG-------LSTSLSQLVLQNN 443 (973)
Q Consensus 374 ~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~~~~~~-------~~~~L~~L~L~~N 443 (973)
+|..+.++++ |++|+|++|+++ .+|..+..++ +|+.|++++|++++..+..+. .+++|++|+|++|
T Consensus 368 ---lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N 443 (636)
T 4eco_A 368 ---IPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNN 443 (636)
T ss_dssp ---CCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSS
T ss_pred ---ccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCC
Confidence 4556777888 999999999998 7888877755 899999999999988888777 7789999999999
Q ss_pred CCCCCCChhhhcCCCCCEEEccCCcCCCCccc-ccccc-------ccCCEEEcCCcccccCCCcccc--ccccccchhcc
Q 002061 444 RFSGELPSELGRLTNLERLILTNNNFSGKIPS-ALGAL-------RQLSSLHLEENALTGSIPNEMG--DCARIVDLNLA 513 (973)
Q Consensus 444 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l-------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls 513 (973)
++++..+..+..+++|++|+|++|+++ .+|. .+... ++|++|+|++|+++ .+|..+. .+++|+.|+|+
T Consensus 444 ~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls 521 (636)
T 4eco_A 444 QISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLS 521 (636)
T ss_dssp CCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECC
T ss_pred ccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECC
Confidence 999555555667999999999999999 4554 44433 39999999999999 6777776 99999999999
Q ss_pred ccccccCCCccccccCCCCeeec------CCCccCCCCChhhhccc-CceEEccCCccccccCcccccCCCCccccCCCC
Q 002061 514 RNSLSGNIPRSLSLLSSLNALNL------SGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLDFLRMGGDGAFAGNEG 586 (973)
Q Consensus 514 ~N~l~~~~~~~~~~l~~L~~L~L------~~N~l~~~~p~~l~~l~-L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~n~~ 586 (973)
+|+|++ +|..+..+++|+.|+| ++|++.+.+|..+..++ |+.|+|++|++ +.+|..+...-..-.+.+|+.
T Consensus 522 ~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~~~L~~L~Ls~N~l 599 (636)
T 4eco_A 522 YNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKITPNISVLDIKDNPN 599 (636)
T ss_dssp SSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCCTTCCEEECCSCTT
T ss_pred CCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHhCcCCEEECcCCCC
Confidence 999997 8999999999999999 67889999999999986 99999999999 788976543222345688887
Q ss_pred CccC
Q 002061 587 LCLD 590 (973)
Q Consensus 587 lc~~ 590 (973)
.|-.
T Consensus 600 ~~~~ 603 (636)
T 4eco_A 600 ISID 603 (636)
T ss_dssp CEEE
T ss_pred cccc
Confidence 7754
No 29
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.2e-49 Score=436.64 Aligned_cols=262 Identities=27% Similarity=0.356 Sum_probs=211.8
Q ss_pred cCCcccCcccccCceEEEEEEecCC-----CcEEEEEeeecc---ccHHHHHHHHHHHHhcCC-CceeeEEEEEEeC-Ce
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLKKN-----AGTVAVKQLWKG---DGVKVFAAEMEILGKIRH-RNILKLYACLLKG-GS 745 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~~~-----~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h-pniv~l~~~~~~~-~~ 745 (973)
++|++.+.||+|+||+||+|++... ++.||||++... ...+.|.+|++++++++| ||||+++++|.++ +.
T Consensus 64 ~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~ 143 (353)
T 4ase_A 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 143 (353)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSC
T ss_pred HHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCE
Confidence 5789999999999999999998643 367999998763 345678999999999965 9999999998764 56
Q ss_pred eEEEEEccCCCchHHHHHhhhcC-----------CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecC
Q 002061 746 SFLVLEYMPNGNLFQALHKRVKE-----------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE 814 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~ 814 (973)
.|+|||||++|+|.++++..... ....+++..+..++.|||+||+||| +++||||||||+|||+++
T Consensus 144 ~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDLK~~NILl~~ 220 (353)
T 4ase_A 144 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSE 220 (353)
T ss_dssp CEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECG
T ss_pred EEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCccCccceeeCC
Confidence 89999999999999999864221 1345899999999999999999999 789999999999999999
Q ss_pred CCCeEEecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHH
Q 002061 815 DYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVY 893 (973)
Q Consensus 815 ~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~ 893 (973)
++.+||+|||+|+...............||+.|||||++.+..|+.++|||||||++|||+| |+.||..... ...+..
T Consensus 221 ~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~-~~~~~~ 299 (353)
T 4ase_A 221 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCR 299 (353)
T ss_dssp GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC-SHHHHH
T ss_pred CCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH-HHHHHH
Confidence 99999999999987755444333445678999999999999999999999999999999998 9999975421 112222
Q ss_pred HHHHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002061 894 WVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
.+.... . ...+....+++.+++.+||+.||++|||+.||+++|+++..
T Consensus 300 ~i~~g~--~------------~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 300 RLKEGT--R------------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp HHHHTC--C------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHcCC--C------------CCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence 222111 0 01112234568899999999999999999999999987643
No 30
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3.4e-47 Score=462.30 Aligned_cols=496 Identities=19% Similarity=0.194 Sum_probs=382.8
Q ss_pred CCcccccCCCCCCC---CCCCcc----eeeeCCC---------CCceEEEeecCCCCCccccccccCCccCcEeeCCCCc
Q 002061 45 DPHGVLDSWKESAD---SPCGFS----GITCDSV---------TGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNV 108 (973)
Q Consensus 45 d~~~~~~~W~~~~~---~~c~w~----gv~C~~~---------~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~ 108 (973)
|+...+++|+.+.+ ++|.|. .|.|... +..++.|||++|.|++..+.++.++++|++|+|++|+
T Consensus 8 ~~~~~~~~~~~~~p~~~~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~ 87 (635)
T 4g8a_A 8 DDDDKLAAANSSIPESWEPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCE 87 (635)
T ss_dssp -----------------CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred CCcchhhcccCCCCCCCCCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCc
Confidence 44445666654432 235443 4778642 2468999999999998777889999999999999999
Q ss_pred ccCcCChhhhCCCCCcEEEecCCcccCCCCc-ccCCCCCCEEeccCccCCCccccccccccccceEEccCCcCCCCCCcc
Q 002061 109 LSGKLPLELSNCSNLKVLNVTGNAMVGSVPD-LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPE 187 (973)
Q Consensus 109 l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~ 187 (973)
|++..|.+|++|++|++|+|++|++++.++. |+++++|++|+|++|++++..+..|+++++|++|++++|.+....+|.
T Consensus 88 i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~ 167 (635)
T 4g8a_A 88 IQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPE 167 (635)
T ss_dssp CCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCG
T ss_pred CCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCch
Confidence 9977778899999999999999999998875 899999999999999999888888999999999999999998888899
Q ss_pred cccCCCCCCEEEcccCCCCCCCChhhhccCCCC----eeecccccccCCCchhhhccccccEEEeeccccCCc-------
Q 002061 188 SIGNLKNLTYLFLAHCNLRGRIPESISELRELG----TLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGE------- 256 (973)
Q Consensus 188 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~----~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~------- 256 (973)
.++.+++|++|+|++|++++..+..+..+.+++ .++++.|.++...+..+ ....+..+++.+|.....
T Consensus 168 ~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~~ 246 (635)
T 4g8a_A 168 YFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQ 246 (635)
T ss_dssp GGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTT-TTCEEEEEEEESCCSSHHHHHHHHH
T ss_pred hhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccc-cchhhhhhhhhcccccccccchhhc
Confidence 999999999999999999988888888776654 57888888874433333 333445555555433210
Q ss_pred ------------------------C---------------------------CccccccccccEEEeeccccccccCCcc
Q 002061 257 ------------------------L---------------------------PAELGNLTLLQEFDISSNQMYGKLPEEI 285 (973)
Q Consensus 257 ------------------------~---------------------------~~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 285 (973)
. +..+..+.+++.+++.+|.+... ..+
T Consensus 247 ~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~--~~~ 324 (635)
T 4g8a_A 247 GLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERV--KDF 324 (635)
T ss_dssp TTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEEC--GGG
T ss_pred CCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccc--ccc
Confidence 0 11122233444555555544322 223
Q ss_pred CCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCCccccccccccccccccccccccCChhhhhhhhHHH
Q 002061 286 GNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLN 365 (973)
Q Consensus 286 ~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ 365 (973)
....+|+.|++.+|.+.+..+. .+..|+.+++.+|.+... .....+++|+.|++++|.+...
T Consensus 325 ~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~------------- 386 (635)
T 4g8a_A 325 SYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFK------------- 386 (635)
T ss_dssp GSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEE-------------
T ss_pred ccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCCC--cccccccccccchhhccccccc-------------
Confidence 4455666677776666644332 345566666666666532 2344677788888888777522
Q ss_pred HHhhhccCCCCccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCC-CCCCCCCCCCEEEcccCC
Q 002061 366 LLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGIS-PLIGLSTSLSQLVLQNNR 444 (973)
Q Consensus 366 ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~~~~L~~L~L~~N~ 444 (973)
+..+..+..+.+|++|+++.|.+. ..+..+..+++|+.++++.|+.....+ ..+..+++++.+++++|+
T Consensus 387 ---------~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~ 456 (635)
T 4g8a_A 387 ---------GCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTH 456 (635)
T ss_dssp ---------EECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSC
T ss_pred ---------cccccchhhhhhhhhhhccccccc-cccccccccccccchhhhhccccccccccccccccccccccccccc
Confidence 123344556788999999999988 456678899999999999888766544 567889999999999999
Q ss_pred CCCCCChhhhcCCCCCEEEccCCcC-CCCccccccccccCCEEEcCCcccccCCCccccccccccchhccccccccCCCc
Q 002061 445 FSGELPSELGRLTNLERLILTNNNF-SGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPR 523 (973)
Q Consensus 445 l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 523 (973)
+.+..+..+..+++|+.|+|++|++ .+..|..|..+++|++|+|++|+|++..|.+|+++++|+.|+|++|+|++..|.
T Consensus 457 l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~ 536 (635)
T 4g8a_A 457 TRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTF 536 (635)
T ss_dssp CEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCG
T ss_pred cccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChh
Confidence 9999999999999999999999985 446788999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCeeecCCCccCCCCChhhhcc--cCceEEccCCccccccCcc
Q 002061 524 SLSLLSSLNALNLSGNKLTGSIPDNLMKL--KLSSIDLSENQLSGSVPLD 571 (973)
Q Consensus 524 ~~~~l~~L~~L~L~~N~l~~~~p~~l~~l--~L~~l~ls~N~l~~~~p~~ 571 (973)
.|..+++|++|+|++|+|++.+|..+..+ .|+.|+|++|+|+|+|...
T Consensus 537 ~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~ 586 (635)
T 4g8a_A 537 PYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQ 586 (635)
T ss_dssp GGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGH
T ss_pred HHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcH
Confidence 99999999999999999999999999887 3999999999999999864
No 31
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.2e-47 Score=466.89 Aligned_cols=455 Identities=18% Similarity=0.266 Sum_probs=370.0
Q ss_pred ccCcEeeCCCCcccCcCChhhhCCCCCcEEEe-cCCcccCCCCc-ccCC-CCCCE-----E---------ec-cCccCCC
Q 002061 97 QSLTVLSLPFNVLSGKLPLELSNCSNLKVLNV-TGNAMVGSVPD-LSAL-KNLEI-----F---------DL-SINYFTG 158 (973)
Q Consensus 97 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L-~~n~l~~~~~~-l~~l-~~L~~-----L---------~L-s~n~l~~ 158 (973)
.+++.|+|++|+++|.+|.+|++|++|++|+| ++|.+.|..+. .... ..+.. + +. ....+.+
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57899999999999999999999999999999 99988776331 1000 00000 0 00 0011111
Q ss_pred cc-----------ccccccccccceEEccC--CcCCCCCCcccccCCCCCCEEEcccCCCCC-----------------C
Q 002061 159 RF-----------PRWVVNLTQLVSLSIGD--NVYDEAEIPESIGNLKNLTYLFLAHCNLRG-----------------R 208 (973)
Q Consensus 159 ~~-----------~~~~~~l~~L~~L~l~~--n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~-----------------~ 208 (973)
.. +........++.+.++. |.++. +|..++++++|++|+|++|++++ .
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~--IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~ 480 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF--ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQY 480 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE--ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHH
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc--hhHHHhcCCCCCEEECcCCcCCCCccccccccccccccccc
Confidence 11 11112233444555544 67764 89999999999999999999998 3
Q ss_pred CChhhh--ccCCCCeeecccccccCCCchhhhccccccEEEeeccc-cCC-cCCccccccc-------cccEEEeecccc
Q 002061 209 IPESIS--ELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANN-LTG-ELPAELGNLT-------LLQEFDISSNQM 277 (973)
Q Consensus 209 ~~~~~~--~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~-l~~-~~~~~l~~l~-------~L~~L~Ls~N~l 277 (973)
+|..++ ++++|++|+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|..++.++ +|++|+|++|++
T Consensus 481 iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L 560 (876)
T 4ecn_A 481 ENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNL 560 (876)
T ss_dssp TTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCC
T ss_pred CChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcC
Confidence 888887 99999999999999999999999999999999999998 998 7898777776 999999999999
Q ss_pred ccccCC--ccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCCcccccccc-ccccccccccccccCC
Q 002061 278 YGKLPE--EIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTA-LTDVDISENQFSGSFP 354 (973)
Q Consensus 278 ~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~-L~~L~Ls~N~l~~~~p 354 (973)
+ .+|. .++++++|+.|++++|+++ .+| .|+.+++|+.|++++|+++ .+|..+..+++ |+.|+|++|+++ .+|
T Consensus 561 ~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp 635 (876)
T 4ecn_A 561 E-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIP 635 (876)
T ss_dssp C-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCC
T ss_pred C-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCc
Confidence 9 8898 8999999999999999999 788 8999999999999999999 89999999999 999999999998 444
Q ss_pred hhhhhhhhHHHHHhhhccCCCCccccccCc--cccceEeccccccccCCCccc---c--CCCCcceEeccCCcCCCCCCC
Q 002061 355 KYLCEKRKLLNLLALSNNFSGEVPNSYADC--KTIQRLRISDNHLSGKIPDGL---W--ALPNVGMLDFGDNDFTGGISP 427 (973)
Q Consensus 355 ~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~---~--~l~~L~~L~L~~N~l~~~~~~ 427 (973)
..+..+ ++|++|+|++|++.+.+|... . .+++|+.|+|++|+++..+..
T Consensus 636 ------------------------~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~ 691 (876)
T 4ecn_A 636 ------------------------NIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTE 691 (876)
T ss_dssp ------------------------SCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHH
T ss_pred ------------------------hhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHH
Confidence 444444 359999999999998776433 2 345999999999999977666
Q ss_pred CCCCCCCCCEEEcccCCCCCCCChhhhcC--------CCCCEEEccCCcCCCCcccccc--ccccCCEEEcCCcccccCC
Q 002061 428 LIGLSTSLSQLVLQNNRFSGELPSELGRL--------TNLERLILTNNNFSGKIPSALG--ALRQLSSLHLEENALTGSI 497 (973)
Q Consensus 428 ~~~~~~~L~~L~L~~N~l~~~~p~~~~~l--------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~ 497 (973)
.+..+++|+.|+|++|+|+ .+|..+... ++|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +
T Consensus 692 ~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-l 768 (876)
T 4ecn_A 692 LFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-F 768 (876)
T ss_dssp HHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-C
T ss_pred HHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-c
Confidence 6678999999999999999 566554432 39999999999999 7888887 99999999999999997 7
Q ss_pred Cccccccccccchhccc------cccccCCCccccccCCCCeeecCCCccCCCCChhhhcccCceEEccCCccccccCcc
Q 002061 498 PNEMGDCARIVDLNLAR------NSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLKLSSIDLSENQLSGSVPLD 571 (973)
Q Consensus 498 p~~~~~l~~L~~L~Ls~------N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~L~~l~ls~N~l~~~~p~~ 571 (973)
|..+..+++|+.|+|++ |++.+.+|..|..+++|+.|+|++|+| +.+|..+.. .|+.|||++|++...-+..
T Consensus 769 p~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~~-~L~~LdLs~N~l~~i~~~~ 846 (876)
T 4ecn_A 769 PTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLTP-QLYILDIADNPNISIDVTS 846 (876)
T ss_dssp CCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCCS-SSCEEECCSCTTCEEECGG
T ss_pred chhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhcC-CCCEEECCCCCCCccChHH
Confidence 98999999999999976 889999999999999999999999999 689988653 6999999999998665544
Q ss_pred cccC--CCCccccCCCCC
Q 002061 572 FLRM--GGDGAFAGNEGL 587 (973)
Q Consensus 572 ~~~~--~~~~~~~~n~~l 587 (973)
+... .....+.+|+..
T Consensus 847 ~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 847 VCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp GHHHHHTTCCEEECCTTS
T ss_pred ccccccchheeecCCCcc
Confidence 3221 112345555543
No 32
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2e-47 Score=455.58 Aligned_cols=472 Identities=18% Similarity=0.188 Sum_probs=376.9
Q ss_pred CCcceeeeCC--CCCceEEEeecCCCCCccccccccCCccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCCCC
Q 002061 61 CGFSGITCDS--VTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP 138 (973)
Q Consensus 61 c~w~gv~C~~--~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~ 138 (973)
|++.+++.-+ ...+++.|+|+++++++..+..++.+++|++|+|++|++++..|..|+.+++|++|+|++|++++.++
T Consensus 12 ~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 91 (549)
T 2z81_A 12 GRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSS 91 (549)
T ss_dssp CTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCH
T ss_pred CCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCH
Confidence 6777776533 23589999999999999889999999999999999999998888999999999999999999999988
Q ss_pred c-ccCCCCCCEEeccCccCCC-ccccccccccccceEEccCCcCCCCCCc-ccccCCCCCCEEEcccCCCCCCCChhhhc
Q 002061 139 D-LSALKNLEIFDLSINYFTG-RFPRWVVNLTQLVSLSIGDNVYDEAEIP-ESIGNLKNLTYLFLAHCNLRGRIPESISE 215 (973)
Q Consensus 139 ~-l~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~ip-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 215 (973)
. ++++++|++|+|++|.+++ ..|..+.++++|++|++++|.+.. .+| ..++++++|++|++++|++++..|..++.
T Consensus 92 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~ 170 (549)
T 2z81_A 92 SWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFS-EIRRIDFAGLTSLNELEIKALSLRNYQSQSLKS 170 (549)
T ss_dssp HHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCC-EECTTTTTTCCEEEEEEEEETTCCEECTTTTTT
T ss_pred HHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCcccc-ccCHhhhhcccccCeeeccCCcccccChhhhhc
Confidence 6 9999999999999999987 467889999999999999998433 344 57899999999999999999999999999
Q ss_pred cCCCCeeecccccccCCCchh-hhccccccEEEeeccccCCcC--C-ccccccccccEEEeeccccccccCC----ccCC
Q 002061 216 LRELGTLDICRNKISGEFPRS-IRKLQKLWKIELYANNLTGEL--P-AELGNLTLLQEFDISSNQMYGKLPE----EIGN 287 (973)
Q Consensus 216 l~~L~~L~L~~N~l~~~~~~~-l~~l~~L~~L~L~~N~l~~~~--~-~~l~~l~~L~~L~Ls~N~l~~~~p~----~~~~ 287 (973)
+++|++|+++.|.+. .+|.. +..+++|++|++++|++++.. | .....+++|+.|++++|.+++..+. .+..
T Consensus 171 l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~ 249 (549)
T 2z81_A 171 IRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRY 249 (549)
T ss_dssp CSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGG
T ss_pred cccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhh
Confidence 999999999999987 45554 456899999999999999642 2 2234578899999999988765443 3456
Q ss_pred CCCccEEEcccCCCCCCC------CCCcCCcccceeeeccCCccCCC-----CCccccccccccccccccccccccCChh
Q 002061 288 LKNLTVFQCFKNNFSGEF------PSGFGDMRKLFAFSIYGNRFSGP-----FPENLGRYTALTDVDISENQFSGSFPKY 356 (973)
Q Consensus 288 l~~L~~L~l~~N~l~~~~------p~~~~~l~~L~~L~l~~N~l~~~-----~~~~l~~l~~L~~L~Ls~N~l~~~~p~~ 356 (973)
+++|+.+++++|.+.+.. ...+..+++|+.|.+.++.+... ++..+....+|+.|++++|+++ .+|..
T Consensus 250 ~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~ 328 (549)
T 2z81_A 250 ILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCS 328 (549)
T ss_dssp CTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHH
T ss_pred hccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHH
Confidence 778888888888776531 12345556666666666655421 1112233445666666666665 55555
Q ss_pred hhh-hhhHHHHHhh-hccCCCCcc---ccccCccccceEeccccccccCCC--ccccCCCCcceEeccCCcCCCCCCCCC
Q 002061 357 LCE-KRKLLNLLAL-SNNFSGEVP---NSYADCKTIQRLRISDNHLSGKIP--DGLWALPNVGMLDFGDNDFTGGISPLI 429 (973)
Q Consensus 357 ~~~-~~~ll~ll~l-~n~~~~~~p---~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~~~~~ 429 (973)
++. ...+ +.+.+ .|++.+.+| ..++.+++|++|+|++|+|++..+ ..+..+++|+.|++++|++++ +|..+
T Consensus 329 ~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~~ 406 (549)
T 2z81_A 329 FSQHLKSL-EFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHP-MPDSC 406 (549)
T ss_dssp HHHHCTTC-CEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCC-CCSCC
T ss_pred HHhcCccc-cEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCcc-CChhh
Confidence 432 3332 22333 344444443 347889999999999999986543 568899999999999999995 56677
Q ss_pred CCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccc
Q 002061 430 GLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVD 509 (973)
Q Consensus 430 ~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 509 (973)
..+++|++|+|++|++++ +|..+ .++|++|+|++|++++.+ ..+++|++|+|++|+|+ .+|. ...+++|+.
T Consensus 407 ~~~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~ 477 (549)
T 2z81_A 407 QWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLV 477 (549)
T ss_dssp CCCTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCE
T ss_pred cccccccEEECCCCCccc-ccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCE
Confidence 889999999999999984 45443 368999999999999653 57899999999999999 5565 467999999
Q ss_pred hhccccccccCCCccccccCCCCeeecCCCccCCCCC
Q 002061 510 LNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIP 546 (973)
Q Consensus 510 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 546 (973)
|+|++|+|++.+|..|..+++|+.|+|++|++++..|
T Consensus 478 L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 478 MKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp EECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred EecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 9999999999999999999999999999999998887
No 33
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.8e-48 Score=421.93 Aligned_cols=265 Identities=25% Similarity=0.312 Sum_probs=200.2
Q ss_pred CCcccCcccccCceEEEEEEecCCCcEEEEEeeeccccHH-HHHHHHHHHHhcCCCceeeEEEEEEeCC----eeEEEEE
Q 002061 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVK-VFAAEMEILGKIRHRNILKLYACLLKGG----SSFLVLE 751 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~-~~~~E~~~l~~l~hpniv~l~~~~~~~~----~~~lv~e 751 (973)
+|.+.++||+|+||+||+|++. |+.||||++....... .+.+|+..+.+++|||||++++++.+++ ..|+|||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~~--g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEEC--CEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 5677889999999999999985 8899999987644322 2334566667889999999999997654 5799999
Q ss_pred ccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcC-----CCCeEecCCCCCCeeecCCCCeEEecccCc
Q 002061 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDC-----SPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
||++|+|.++++.. .++|..+.+++.|+|+||+|||+.+ ..+||||||||+|||++.++.+||+|||+|
T Consensus 82 y~~~gsL~~~l~~~------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla 155 (303)
T 3hmm_A 82 YHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp CCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred CCCCCcHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence 99999999999753 4899999999999999999999431 238999999999999999999999999999
Q ss_pred ccccCCCCcc--cccccCCccccccccccccC------CCCccchHHHHHHHHHHHHhCCCCCCcccC----------Cc
Q 002061 827 KIAENSPKVS--DYSCFAGTHGYIAPELAYTC------KVSEKSDVFSFGVVLLELVTGRKPVEEEYG----------DG 888 (973)
Q Consensus 827 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~~l~el~tg~~pf~~~~~----------~~ 888 (973)
+......... ......||+.|||||++.+. .++.++|||||||++|||+||..||..... ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3hmm_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc
Confidence 8775543322 22345799999999998754 467899999999999999999887753211 11
Q ss_pred ccHHHHHHHHhccccccchhccccccCc-chHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002061 889 KDIVYWVSTHLNNHENVLKVLDCEVASE-SIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
............. ..++..... ...+..+.+.+++.+||+.||++||||.||+++|+++..
T Consensus 236 ~~~~~~~~~~~~~------~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 236 PSVEEMRKVVCEQ------KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp CCHHHHHHHHTTS------CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHhcc------cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 1222222211111 111111111 123456678899999999999999999999999987643
No 34
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2.7e-48 Score=417.14 Aligned_cols=247 Identities=27% Similarity=0.346 Sum_probs=198.1
Q ss_pred cCCcccCcccccCceEEEEEEec---CCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEE
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLK---KNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~---~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
++|++.+.||+|+||+||+|++. .+++.||||++.+. ....++.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999874 45789999998652 334568899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccc
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
|||||+||+|.+++.+. ..+++..+..++.|++.||+||| +++|+||||||+|||++.+|.+||+|||+|+.
T Consensus 104 vmEy~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp EECCCTTCEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred EEEcCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence 99999999999999864 35899999999999999999999 78999999999999999999999999999986
Q ss_pred ccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchh
Q 002061 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
...... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||... +...............
T Consensus 176 ~~~~~~--~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~-----~~~~~~~~i~~~~~~~--- 245 (304)
T 3ubd_A 176 SIDHEK--KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK-----DRKETMTMILKAKLGM--- 245 (304)
T ss_dssp -----C--CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCC---
T ss_pred ccCCCc--cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc-----CHHHHHHHHHcCCCCC---
Confidence 543221 223467999999999999999999999999999999999999999653 2222222222211111
Q ss_pred ccccccCcchHHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHH
Q 002061 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPP-----MREVVKM 949 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-----~~evl~~ 949 (973)
+....+++.+++.+||+.||++||| ++|+++|
T Consensus 246 ---------p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 246 ---------PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp ---------CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred ---------CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 1123456788999999999999998 4788875
No 35
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2e-47 Score=412.83 Aligned_cols=252 Identities=23% Similarity=0.333 Sum_probs=192.7
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCC-------
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGG------- 744 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~------- 744 (973)
+.+|++.+.||+|+||+||+|+++.+++.||||++... ...+.+.+|++++++++|||||+++++|.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 45789999999999999999999999999999998653 23467889999999999999999999987543
Q ss_pred -----eeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeE
Q 002061 745 -----SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPK 819 (973)
Q Consensus 745 -----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 819 (973)
..|+|||||++|+|.+++... ......++..+..++.|+++||+||| +++||||||||+|||++.++.+|
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~--~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vK 158 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGR--CTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVK 158 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTC--CSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEE
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhc--CCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEE
Confidence 369999999999999999854 22234567778899999999999999 78999999999999999999999
Q ss_pred EecccCcccccCCCCcc----------cccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcc
Q 002061 820 IADFGVAKIAENSPKVS----------DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGK 889 (973)
Q Consensus 820 l~Dfgl~~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~ 889 (973)
|+|||+|+......... ..+..+||+.|||||++.+..|+.++||||+||++|||++ ||....
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~---- 231 (299)
T 4g31_A 159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM---- 231 (299)
T ss_dssp ECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH----
T ss_pred EccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc----
Confidence 99999998765432211 1233579999999999999999999999999999999996 775321
Q ss_pred cHHHHHHHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 890 DIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
+........ .. ... +....+..+.+.+++.+||+.||++|||+.|++++
T Consensus 232 ~~~~~~~~~-~~---------~~~-p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 232 ERVRTLTDV-RN---------LKF-PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHHHHHHH-HT---------TCC-CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHH-hc---------CCC-CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111111111 11 111 12233444566789999999999999999999985
No 36
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=9.7e-47 Score=446.37 Aligned_cols=436 Identities=19% Similarity=0.183 Sum_probs=380.0
Q ss_pred CceEEEeecCCCCCccccccccCCccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCCCCcccCCCCCCEEecc
Q 002061 73 GRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLS 152 (973)
Q Consensus 73 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls 152 (973)
.+++.|+|+++.+++..+..+..+++|++|+|++|++++..|..|+.+++|++|+|++|++++.+.. .+++|++|+|+
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~--~l~~L~~L~L~ 98 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCH--PTVNLKHLDLS 98 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEEECC--CCCCCSEEECC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeecCcc--ccCCccEEecc
Confidence 6899999999999998888999999999999999999988899999999999999999999976665 89999999999
Q ss_pred CccCCC-ccccccccccccceEEccCCcCCCCCCcccccCCCCC--CEEEcccCCC--CCCCChhhhccC-CCCeeeccc
Q 002061 153 INYFTG-RFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNL--TYLFLAHCNL--RGRIPESISELR-ELGTLDICR 226 (973)
Q Consensus 153 ~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L--~~L~L~~n~l--~~~~~~~~~~l~-~L~~L~L~~ 226 (973)
+|.+++ .+|..|+++++|++|++++|.+.. ..+..+++| ++|++++|++ ++..|..+..+. +...+++++
T Consensus 99 ~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~----~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 174 (520)
T 2z7x_B 99 FNAFDALPICKEFGNMSQLKFLGLSTTHLEK----SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPT 174 (520)
T ss_dssp SSCCSSCCCCGGGGGCTTCCEEEEEESSCCG----GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCS
T ss_pred CCccccccchhhhccCCcceEEEecCcccch----hhccccccceeeEEEeecccccccccccccccccccceEEEEecc
Confidence 999997 578999999999999999999864 456778888 9999999999 888888888776 345678899
Q ss_pred ccccCCCch-hhhccccccEEEeeccc-------cCCcCCccccccccccEEEeeccccccccCCccC---CCCCccEEE
Q 002061 227 NKISGEFPR-SIRKLQKLWKIELYANN-------LTGELPAELGNLTLLQEFDISSNQMYGKLPEEIG---NLKNLTVFQ 295 (973)
Q Consensus 227 N~l~~~~~~-~l~~l~~L~~L~L~~N~-------l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~ 295 (973)
|++.+.++. .+.++++|+.|++++|. +.+.+| .+..+++|+.|++++|.+++..+..+. ..++|++|+
T Consensus 175 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~ 253 (520)
T 2z7x_B 175 NKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFS 253 (520)
T ss_dssp SSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEE
T ss_pred Ccchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEE
Confidence 998876664 57889999999999998 776666 789999999999999998764433322 246899999
Q ss_pred cccCCCCCCCCCCc-----CCcccceeeeccCCccCCCCC-cccccc---ccccccccccccccccCChhhhhhhhHHHH
Q 002061 296 CFKNNFSGEFPSGF-----GDMRKLFAFSIYGNRFSGPFP-ENLGRY---TALTDVDISENQFSGSFPKYLCEKRKLLNL 366 (973)
Q Consensus 296 l~~N~l~~~~p~~~-----~~l~~L~~L~l~~N~l~~~~~-~~l~~l---~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~l 366 (973)
+++|++++.+|..+ +.+++|+.+++++|.+ .+| ..+..+ .+|+.|++++|.+...
T Consensus 254 l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~-------------- 317 (520)
T 2z7x_B 254 ISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHM-------------- 317 (520)
T ss_dssp EEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCC--------------
T ss_pred eecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccc--------------
Confidence 99999999999988 9999999999999999 455 555555 6799999999998621
Q ss_pred HhhhccCCCCccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCC--CCCCCCCCCCCCEEEcccCC
Q 002061 367 LALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGG--ISPLIGLSTSLSQLVLQNNR 444 (973)
Q Consensus 367 l~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~~~~L~~L~L~~N~ 444 (973)
+ .+..+++|++|+|++|++++.+|..+..+++|+.|++++|++++. .+..+..+++|++|+|++|+
T Consensus 318 -----------~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~ 385 (520)
T 2z7x_B 318 -----------L-CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNS 385 (520)
T ss_dssp -----------C-CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSC
T ss_pred -----------c-chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCc
Confidence 1 125778999999999999998999999999999999999999973 44668899999999999999
Q ss_pred CCCCCCh-hhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhccccccccCCCc
Q 002061 445 FSGELPS-ELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPR 523 (973)
Q Consensus 445 l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 523 (973)
+++.+|. .+..+++|++|+|++|++++..|..+. ++|++|+|++|+++ .+|..+..+++|+.|+|++|+|++..+.
T Consensus 386 l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~ 462 (520)
T 2z7x_B 386 VSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDG 462 (520)
T ss_dssp CBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTT
T ss_pred CCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHH
Confidence 9985665 488899999999999999988887765 79999999999999 7788788999999999999999954444
Q ss_pred cccccCCCCeeecCCCccCCCCC
Q 002061 524 SLSLLSSLNALNLSGNKLTGSIP 546 (973)
Q Consensus 524 ~~~~l~~L~~L~L~~N~l~~~~p 546 (973)
.|..+++|+.|+|++|++++..+
T Consensus 463 ~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 463 IFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp TTTTCTTCCEEECCSSCBCCCHH
T ss_pred HhccCCcccEEECcCCCCcccCC
Confidence 49999999999999999997665
No 37
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1e-45 Score=441.25 Aligned_cols=457 Identities=21% Similarity=0.235 Sum_probs=381.9
Q ss_pred EEEeecCCCCCccccccccCCccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCCCC-cccCCCCCCEEeccCc
Q 002061 76 TEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP-DLSALKNLEIFDLSIN 154 (973)
Q Consensus 76 ~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~-~l~~l~~L~~L~Ls~n 154 (973)
..++++++++++ +|..+. ++|++|+|++|.+++..|..|+.+++|++|+|++|++++.++ .|+++++|++|||++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 778999999995 887665 899999999999998777899999999999999999999865 5999999999999999
Q ss_pred cCCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccCCCCCCCChhhhccCCC--Ceeecccccc--c
Q 002061 155 YFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELREL--GTLDICRNKI--S 230 (973)
Q Consensus 155 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~L~~N~l--~ 230 (973)
.++ .+|.. .+++|++|++++|.+....+|..++++++|++|+|++|++++. .+..+++| ++|++++|++ +
T Consensus 111 ~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~ 184 (562)
T 3a79_B 111 RLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIK 184 (562)
T ss_dssp CCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCC
T ss_pred cCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccccc
Confidence 999 56665 8999999999999998777789999999999999999999863 45566666 9999999999 8
Q ss_pred CCCchhhhccc-cccEEEeeccccCCcCCc-cccccccccEEEeeccc-----cccccCCccCCCCCccEEEcccCCCCC
Q 002061 231 GEFPRSIRKLQ-KLWKIELYANNLTGELPA-ELGNLTLLQEFDISSNQ-----MYGKLPEEIGNLKNLTVFQCFKNNFSG 303 (973)
Q Consensus 231 ~~~~~~l~~l~-~L~~L~L~~N~l~~~~~~-~l~~l~~L~~L~Ls~N~-----l~~~~p~~~~~l~~L~~L~l~~N~l~~ 303 (973)
+..|..+..+. ....++++.|.+.+.++. .+..+++|+.|++++|+ +.+ .+..+..+++|+.+++.++.+.+
T Consensus 185 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~-~~~~l~~l~~L~~L~L~~~~l~~ 263 (562)
T 3a79_B 185 GGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMT-FLSELTRGPTLLNVTLQHIETTW 263 (562)
T ss_dssp SSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHH-HHHHHHSCSSCEEEEEEEEEECH
T ss_pred ccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHH-HHHHHhccCcceEEEecCCcCcH
Confidence 88888888765 223678899998876654 46789999999999995 222 23457788999999998888765
Q ss_pred CCCCC---cCCcccceeeeccCCccCCCCCccc-----cccccccccccccccccccCCh-hhhhhhhHHHHHhhhccCC
Q 002061 304 EFPSG---FGDMRKLFAFSIYGNRFSGPFPENL-----GRYTALTDVDISENQFSGSFPK-YLCEKRKLLNLLALSNNFS 374 (973)
Q Consensus 304 ~~p~~---~~~l~~L~~L~l~~N~l~~~~~~~l-----~~l~~L~~L~Ls~N~l~~~~p~-~~~~~~~ll~ll~l~n~~~ 374 (973)
..... ....++|++|++++|.+++.+|..+ ..++.|+.++++.|.+ .+|. .+....
T Consensus 264 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~------------- 328 (562)
T 3a79_B 264 KCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVF------------- 328 (562)
T ss_dssp HHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHH-------------
T ss_pred HHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhh-------------
Confidence 21111 1123489999999999999999887 7888888888888887 4553 222111
Q ss_pred CCccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCC--Chh
Q 002061 375 GEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGEL--PSE 452 (973)
Q Consensus 375 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~--p~~ 452 (973)
...+|++|++++|.+.... ....+++|++|++++|++++..+..++.+++|++|+|++|++++.. |..
T Consensus 329 --------~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 398 (562)
T 3a79_B 329 --------AEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALM 398 (562)
T ss_dssp --------HTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHT
T ss_pred --------ccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhh
Confidence 1257999999999986322 1267899999999999999999999999999999999999999643 467
Q ss_pred hhcCCCCCEEEccCCcCCCCcc-ccccccccCCEEEcCCcccccCCCccccccccccchhccccccccCCCccccccCCC
Q 002061 453 LGRLTNLERLILTNNNFSGKIP-SALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSL 531 (973)
Q Consensus 453 ~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 531 (973)
+.++++|++|+|++|++++.+| ..+..+++|++|+|++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+++|
T Consensus 399 ~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L 475 (562)
T 3a79_B 399 TKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQAL 475 (562)
T ss_dssp TTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCC
T ss_pred hcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCC
Confidence 8999999999999999998454 5688999999999999999987776654 78999999999999 677777799999
Q ss_pred CeeecCCCccCCCCChh-hhccc-CceEEccCCccccccCcc
Q 002061 532 NALNLSGNKLTGSIPDN-LMKLK-LSSIDLSENQLSGSVPLD 571 (973)
Q Consensus 532 ~~L~L~~N~l~~~~p~~-l~~l~-L~~l~ls~N~l~~~~p~~ 571 (973)
+.|+|++|+|+ .+|.. +..++ |+.|+|++|+|.|.||..
T Consensus 476 ~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 516 (562)
T 3a79_B 476 QELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCPGI 516 (562)
T ss_dssp SEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHHHH
T ss_pred CEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcchH
Confidence 99999999999 56665 77776 999999999999999964
No 38
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.4e-44 Score=401.51 Aligned_cols=199 Identities=25% Similarity=0.407 Sum_probs=173.2
Q ss_pred HcCCcccCcccccCceEEEEEEec---CCCcEEEEEeeeccccHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeeEEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLK---KNAGTVAVKQLWKGDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~---~~~~~vavK~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~ 750 (973)
.++|++.+.||+|+||+||+|+++ .+++.||||++.......++.+|+++++.+ +||||+++++++.++++.|+||
T Consensus 20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvm 99 (361)
T 4f9c_A 20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAM 99 (361)
T ss_dssp GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEE
T ss_pred cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEE
Confidence 467999999999999999999875 457899999998877777889999999998 6999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCC-CCeEEecccCcccc
Q 002061 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED-YEPKIADFGVAKIA 829 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~Dfgl~~~~ 829 (973)
||+++|+|.+++. .+++..+..++.|++.||+||| +++||||||||+|||++.+ +.+||+|||+|+..
T Consensus 100 E~~~g~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~ 168 (361)
T 4f9c_A 100 PYLEHESFLDILN--------SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGT 168 (361)
T ss_dssp ECCCCCCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred eCCCcccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCccc
Confidence 9999999999884 3788999999999999999999 7899999999999999876 79999999999765
Q ss_pred cCCCCc--------------------------ccccccCCccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCC
Q 002061 830 ENSPKV--------------------------SDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVE 882 (973)
Q Consensus 830 ~~~~~~--------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~pf~ 882 (973)
...... ......+||+.|+|||++.+. .|+.++||||+||++|||++|+.||.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~ 248 (361)
T 4f9c_A 169 HDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY 248 (361)
T ss_dssp TTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred CCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCC
Confidence 432110 112235799999999999775 58999999999999999999999996
Q ss_pred cc
Q 002061 883 EE 884 (973)
Q Consensus 883 ~~ 884 (973)
..
T Consensus 249 ~~ 250 (361)
T 4f9c_A 249 KA 250 (361)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 39
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-44 Score=404.08 Aligned_cols=264 Identities=24% Similarity=0.310 Sum_probs=202.5
Q ss_pred cCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEe------CCe
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLK------GGS 745 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~------~~~ 745 (973)
++|++.+.||+|+||+||+|++..+|+.||||++... ...+.+.+|++++++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 4799999999999999999999999999999998653 334567899999999999999999998764 357
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccC
Q 002061 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
.|+|||||+ |+|.+++.. ...+++..+..++.||+.||+||| +++||||||||+|||++.++.+||+|||+
T Consensus 134 ~~ivmE~~~-g~L~~~i~~-----~~~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHS-----SQPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp EEEEEECCS-EEHHHHHTS-----SSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEeCCC-CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecce
Confidence 899999995 789999864 346899999999999999999999 78999999999999999999999999999
Q ss_pred cccccCCCC--cccccccCCccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccc
Q 002061 826 AKIAENSPK--VSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH 902 (973)
Q Consensus 826 ~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 902 (973)
|+....... .......+||+.|||||++.+. .++.++||||+||++|||++|+.||.+. +..+....+.......
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~--~~~~~l~~I~~~~g~p 282 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK--NYVHQLQLIMMVLGTP 282 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCS--SHHHHHHHHHHHHCCC
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCC--CHHHHHHHHHHhcCCC
Confidence 986643221 2223456899999999998875 4689999999999999999999999653 1111111111111110
Q ss_pred cc-cchh---------cc--ccccCcc----hHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 903 EN-VLKV---------LD--CEVASES----IKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 903 ~~-~~~~---------~~--~~~~~~~----~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.. .... .. +...+.. .......+.+|+.+||+.||.+|||+.|+++|-
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp 346 (398)
T 4b99_A 283 SPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHP 346 (398)
T ss_dssp CGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSG
T ss_pred ChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCH
Confidence 00 0000 00 0000000 011235678999999999999999999999874
No 40
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.4e-43 Score=422.76 Aligned_cols=435 Identities=19% Similarity=0.193 Sum_probs=366.6
Q ss_pred CceEEEeecCCCCCccccccccCCccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCCCCcccCCCCCCEEecc
Q 002061 73 GRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLS 152 (973)
Q Consensus 73 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls 152 (973)
.+++.|+|+++.+++..+..++.+++|++|+|++|.+++..|..|+.+++|++|+|++|+++..+.. .+++|++|||+
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~--~l~~L~~L~Ls 129 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNISCC--PMASLRHLDLS 129 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCEECSC--CCTTCSEEECC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCccCcc--ccccCCEEECC
Confidence 6799999999999988888999999999999999999988899999999999999999999977766 89999999999
Q ss_pred CccCCC-ccccccccccccceEEccCCcCCCCCCcccccCCCCC--CEEEcccCCC--CCCCChhhhccC--CCCeeecc
Q 002061 153 INYFTG-RFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNL--TYLFLAHCNL--RGRIPESISELR--ELGTLDIC 225 (973)
Q Consensus 153 ~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L--~~L~L~~n~l--~~~~~~~~~~l~--~L~~L~L~ 225 (973)
+|.+++ ..|..|.++++|++|++++|.+... .+..+++| ++|++++|++ ++..|..+..+. .| .++++
T Consensus 130 ~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~----~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l-~l~l~ 204 (562)
T 3a79_B 130 FNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL----DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVL-HLVFH 204 (562)
T ss_dssp SSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT----TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEE-EEEEC
T ss_pred CCCccccCchHhhcccCcccEEecCCCccccC----chhhhhhceeeEEEeecccccccccCcccccccCcceE-EEEec
Confidence 999997 4578999999999999999999753 34555555 9999999999 888888888765 33 56889
Q ss_pred cccccCCCch-hhhccccccEEEeeccc-----cCCcCCccccccccccEEEeecccccccc----CCccCCCCCccEEE
Q 002061 226 RNKISGEFPR-SIRKLQKLWKIELYANN-----LTGELPAELGNLTLLQEFDISSNQMYGKL----PEEIGNLKNLTVFQ 295 (973)
Q Consensus 226 ~N~l~~~~~~-~l~~l~~L~~L~L~~N~-----l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~ 295 (973)
+|.+.+.++. .+..+++|+.|++++|+ +.+ ....+..+++|+.|+++++.+.+.. +..+ ..++|++|+
T Consensus 205 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~-~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~-~~~~L~~L~ 282 (562)
T 3a79_B 205 PNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMT-FLSELTRGPTLLNVTLQHIETTWKCSVKLFQFF-WPRPVEYLN 282 (562)
T ss_dssp SSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHH-HHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHH-TTSSEEEEE
T ss_pred CccchhhhhhhcccccceEEEecccccccccchHHH-HHHHHhccCcceEEEecCCcCcHHHHHHHHHhh-hcccccEEE
Confidence 9998876665 46788999999999985 232 2345778899999999888776432 2222 235899999
Q ss_pred cccCCCCCCCCCCc-----CCcccceeeeccCCccCCCCC-cccccc---ccccccccccccccccCChhhhhhhhHHHH
Q 002061 296 CFKNNFSGEFPSGF-----GDMRKLFAFSIYGNRFSGPFP-ENLGRY---TALTDVDISENQFSGSFPKYLCEKRKLLNL 366 (973)
Q Consensus 296 l~~N~l~~~~p~~~-----~~l~~L~~L~l~~N~l~~~~~-~~l~~l---~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~l 366 (973)
+++|++++.+|..+ ..++.|+.+++..|.+ .+| ..+..+ .+|++|++++|.+...
T Consensus 283 l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~-------------- 346 (562)
T 3a79_B 283 IYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHM-------------- 346 (562)
T ss_dssp EEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCC--------------
T ss_pred EeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEccCCCcccc--------------
Confidence 99999999999887 8888888888888888 344 333332 5799999999988621
Q ss_pred HhhhccCCCCccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCC--CCCCCCCCCCCEEEcccCC
Q 002061 367 LALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGI--SPLIGLSTSLSQLVLQNNR 444 (973)
Q Consensus 367 l~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~~~~L~~L~L~~N~ 444 (973)
+ ....+++|++|+|++|++++.+|..+..+++|+.|++++|++++.. +..+..+++|++|+|++|+
T Consensus 347 -----------~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~ 414 (562)
T 3a79_B 347 -----------V-CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNS 414 (562)
T ss_dssp -----------C-CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSC
T ss_pred -----------c-CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCc
Confidence 0 1257789999999999999999999999999999999999999864 3568899999999999999
Q ss_pred CCCCCCh-hhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhccccccccCCCc
Q 002061 445 FSGELPS-ELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPR 523 (973)
Q Consensus 445 l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 523 (973)
+++.+|. .+..+++|++|+|++|++++..|..+. ++|++|+|++|+|+ .+|..+.++++|+.|+|++|+|++..+.
T Consensus 415 l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~ 491 (562)
T 3a79_B 415 LNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDG 491 (562)
T ss_dssp CBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTT
T ss_pred CCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHH
Confidence 9984554 588999999999999999987777665 79999999999999 5676666999999999999999954444
Q ss_pred cccccCCCCeeecCCCccCCCCCh
Q 002061 524 SLSLLSSLNALNLSGNKLTGSIPD 547 (973)
Q Consensus 524 ~~~~l~~L~~L~L~~N~l~~~~p~ 547 (973)
.|..+++|+.|+|++|++++..|.
T Consensus 492 ~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 492 VFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp STTTCTTCCCEECCSCCBCCCHHH
T ss_pred HHhcCCCCCEEEecCCCcCCCcch
Confidence 499999999999999999987664
No 41
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.2e-42 Score=419.95 Aligned_cols=502 Identities=20% Similarity=0.194 Sum_probs=394.5
Q ss_pred EEeecCCCCCccccccccCCccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCCCCc-ccCCCCCCEEeccCcc
Q 002061 77 EISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPD-LSALKNLEIFDLSINY 155 (973)
Q Consensus 77 ~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~-l~~l~~L~~L~Ls~n~ 155 (973)
.++-++.+++ .+|+.|- +++++|||++|+|++..|..|.++++|++|+|++|+|++.++. |+++++|++|+|++|+
T Consensus 35 ~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~ 111 (635)
T 4g8a_A 35 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 111 (635)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred EEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCc
Confidence 4567777887 6776553 4799999999999977778999999999999999999998774 9999999999999999
Q ss_pred CCCccccccccccccceEEccCCcCCCCCCc-ccccCCCCCCEEEcccCCCCC-CCChhhhccCCCCeeecccccccCCC
Q 002061 156 FTGRFPRWVVNLTQLVSLSIGDNVYDEAEIP-ESIGNLKNLTYLFLAHCNLRG-RIPESISELRELGTLDICRNKISGEF 233 (973)
Q Consensus 156 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip-~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~ 233 (973)
+++..+.+|.++++|++|+|++|.++. +| ..|+++++|++|+|++|++++ .+|..++.+++|++|+|++|+|++..
T Consensus 112 l~~l~~~~f~~L~~L~~L~Ls~N~l~~--l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 189 (635)
T 4g8a_A 112 IQSLALGAFSGLSSLQKLVAVETNLAS--LENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY 189 (635)
T ss_dssp CCEECGGGGTTCTTCCEEECTTSCCCC--STTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEEC
T ss_pred CCCCCHHHhcCCCCCCEEECCCCcCCC--CChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccc
Confidence 998888899999999999999999974 44 468999999999999999986 46888999999999999999999888
Q ss_pred chhhhcccccc----EEEeeccccCCcCCccccccccccEEEeeccccccc-cCCccCCCCCccEEEcc-----------
Q 002061 234 PRSIRKLQKLW----KIELYANNLTGELPAELGNLTLLQEFDISSNQMYGK-LPEEIGNLKNLTVFQCF----------- 297 (973)
Q Consensus 234 ~~~l~~l~~L~----~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~l~----------- 297 (973)
+..+..+.+++ .++++.|.++...+.. .....++.+++++|..... .+..+..+..++...+.
T Consensus 190 ~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~-~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~ 268 (635)
T 4g8a_A 190 CTDLRVLHQMPLLNLSLDLSLNPMNFIQPGA-FKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLE 268 (635)
T ss_dssp GGGGHHHHTCTTCCCEEECTTCCCCEECTTT-TTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCS
T ss_pred cccccchhhhhhhhhhhhcccCcccccCccc-ccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccc
Confidence 88888877654 7889999999544444 4445678888888865422 22233444444444332
Q ss_pred -------------------cCCCCC---CCCCCcCCcccceeeeccCCccCCCCCccccccccccccccccccccccCCh
Q 002061 298 -------------------KNNFSG---EFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPK 355 (973)
Q Consensus 298 -------------------~N~l~~---~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~ 355 (973)
.+.... ..+..+..+.+++.+.+.+|.+... ..+.....|+.|++++|.+.+..+.
T Consensus 269 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~~~~~~~~~~ 346 (635)
T 4g8a_A 269 KFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERV--KDFSYNFGWQHLELVNCKFGQFPTL 346 (635)
T ss_dssp CCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEEC--GGGGSCCCCSEEEEESCEESSCCCC
T ss_pred cccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccc--cccccchhhhhhhcccccccCcCcc
Confidence 221111 1223344555666666666666532 2355566788888888888754443
Q ss_pred hhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccc--cCCCccccCCCCcceEeccCCcCCCCCCCCCCCCC
Q 002061 356 YLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLS--GKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLST 433 (973)
Q Consensus 356 ~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 433 (973)
.+.... .+.+..+..+. +.....+++|+.|++++|.+. +..+..+..+.+|+.++++.|.+... +..+..++
T Consensus 347 ~l~~L~----~l~l~~n~~~~-~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~-~~~~~~l~ 420 (635)
T 4g8a_A 347 KLKSLK----RLTFTSNKGGN-AFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITM-SSNFLGLE 420 (635)
T ss_dssp BCTTCC----EEEEESCCSCC-BCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEE-CSCCTTCT
T ss_pred cchhhh----hcccccccCCC-Ccccccccccccchhhccccccccccccchhhhhhhhhhhccccccccc-cccccccc
Confidence 332211 11222232222 334567899999999999986 45677778899999999999988764 44567889
Q ss_pred CCCEEEcccCCCCCCCC-hhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCccc-ccCCCccccccccccchh
Q 002061 434 SLSQLVLQNNRFSGELP-SELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENAL-TGSIPNEMGDCARIVDLN 511 (973)
Q Consensus 434 ~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~ 511 (973)
+|+.+++++|+.....+ ..+..+++++.++++.|.+++..+..+..++.|+.|+|++|++ .+..|..|..+++|+.|+
T Consensus 421 ~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~ 500 (635)
T 4g8a_A 421 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 500 (635)
T ss_dssp TCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred cccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEE
Confidence 99999999988775544 5688999999999999999999999999999999999999974 556889999999999999
Q ss_pred ccccccccCCCccccccCCCCeeecCCCccCCCCChhhhccc-CceEEccCCccccccCcccccCCC---CccccCCCCC
Q 002061 512 LARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLDFLRMGG---DGAFAGNEGL 587 (973)
Q Consensus 512 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-L~~l~ls~N~l~~~~p~~~~~~~~---~~~~~~n~~l 587 (973)
|++|+|++..|..|.++++|++|+|++|+|++.+|..+..++ |+.|||++|++++..|..+..+.. .-...+||+.
T Consensus 501 Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~ 580 (635)
T 4g8a_A 501 LSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 580 (635)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBC
T ss_pred CCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCc
Confidence 999999999999999999999999999999998888898886 999999999999999987766532 2357999999
Q ss_pred ccCcc
Q 002061 588 CLDQS 592 (973)
Q Consensus 588 c~~~~ 592 (973)
|....
T Consensus 581 C~C~~ 585 (635)
T 4g8a_A 581 CTCEH 585 (635)
T ss_dssp CSGGG
T ss_pred ccCCc
Confidence 86543
No 42
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.5e-43 Score=412.31 Aligned_cols=251 Identities=23% Similarity=0.265 Sum_probs=204.2
Q ss_pred HHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-----ccHHHHHHH---HHHHHhcCCCceeeEEEEEEeCCe
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAE---MEILGKIRHRNILKLYACLLKGGS 745 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~E---~~~l~~l~hpniv~l~~~~~~~~~ 745 (973)
.+++|++.+.||+|+||+||+|+++.+|+.||||++.+. .......+| +++++.++|||||+++++|.+++.
T Consensus 187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ 266 (689)
T 3v5w_A 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK 266 (689)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred chHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCE
Confidence 356899999999999999999999999999999998652 233334444 556667799999999999999999
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccC
Q 002061 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
.|+||||++||+|.+++.+. ..+++..+..++.||+.||+||| +++||||||||+|||++.+|.+||+|||+
T Consensus 267 lylVmEy~~GGdL~~~l~~~-----~~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGl 338 (689)
T 3v5w_A 267 LSFILDLMNGGDLHYHLSQH-----GVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGL 338 (689)
T ss_dssp EEEEECCCCSCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccce
Confidence 99999999999999999864 35899999999999999999999 89999999999999999999999999999
Q ss_pred cccccCCCCcccccccCCcccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccc
Q 002061 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
|+...... ....+||+.|||||++.+ ..|+.++||||+||++|||++|+.||...... +..............
T Consensus 339 A~~~~~~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~--~~~~i~~~i~~~~~~ 412 (689)
T 3v5w_A 339 ACDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK--DKHEIDRMTLTMAVE 412 (689)
T ss_dssp CEECSSCC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCC--CHHHHHHHHHHCCCC
T ss_pred eeecCCCC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHhhcCCCCC
Confidence 98765432 234689999999999964 57999999999999999999999999764222 222222221111111
Q ss_pred cchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHHh
Q 002061 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPP-----MREVVKML 950 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-----~~evl~~L 950 (973)
.+.....++.+++.+|++.||.+|++ +.||.+|-
T Consensus 413 ------------~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~Hp 451 (689)
T 3v5w_A 413 ------------LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESP 451 (689)
T ss_dssp ------------CCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSG
T ss_pred ------------CCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCc
Confidence 11123456789999999999999998 78888764
No 43
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=8.2e-43 Score=382.96 Aligned_cols=291 Identities=30% Similarity=0.497 Sum_probs=217.6
Q ss_pred CchHHHHHHHHHHHhcCCCcccccCCCCCCCCCCC--cceeeeCCCC--CceEEEeecCCCCCc--cccccccCCccCcE
Q 002061 28 SLNVETQALIQFKSKLKDPHGVLDSWKESADSPCG--FSGITCDSVT--GRVTEISFDNKSLSG--EISSSISALQSLTV 101 (973)
Q Consensus 28 ~~~~~~~aLl~~k~~~~d~~~~~~~W~~~~~~~c~--w~gv~C~~~~--~~v~~l~l~~~~l~~--~~~~~l~~l~~L~~ 101 (973)
|.++|++||++||+++.||. .+++|+.+. +||. |.||+|+..+ ++|+.|+|++++++| .+|+.++.+++|++
T Consensus 3 c~~~~~~aL~~~k~~~~~~~-~l~~W~~~~-~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~ 80 (313)
T 1ogq_A 3 CNPQDKQALLQIKKDLGNPT-TLSSWLPTT-DCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNF 80 (313)
T ss_dssp SCHHHHHHHHHHHHHTTCCG-GGTTCCTTS-CTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSE
T ss_pred CCHHHHHHHHHHHHhcCCcc-cccCCCCCC-CCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCe
Confidence 56889999999999999987 799998764 4787 9999998755 899999999999999 99999999999999
Q ss_pred eeCCC-CcccCcCChhhhCCCCCcEEEecCCcccCCCC-cccCCCCCCEEeccCccCCCccccccccccccceEEccCCc
Q 002061 102 LSLPF-NVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP-DLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNV 179 (973)
Q Consensus 102 L~Ls~-n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~ 179 (973)
|+|++ |.+++.+|..|+++++|++|+|++|.+++..+ .++++++|++|+|++|.+++.+|..+..+++|++|++++|.
T Consensus 81 L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 160 (313)
T 1ogq_A 81 LYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR 160 (313)
T ss_dssp EEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC
T ss_pred eeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCc
Confidence 99995 99999999999999999999999999986554 58999999999999999988777777777777777777776
Q ss_pred CCCCCCcccccCCC-CCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccccCCcCC
Q 002061 180 YDEAEIPESIGNLK-NLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELP 258 (973)
Q Consensus 180 l~~~~ip~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 258 (973)
++. .+|..++.++ +|++|+|++|++++.+|..+..++ |++|+|++|++++..|..+..+++|++|+|++|.+++.+|
T Consensus 161 l~~-~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 238 (313)
T 1ogq_A 161 ISG-AIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG 238 (313)
T ss_dssp CEE-ECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG
T ss_pred ccC-cCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecC
Confidence 642 3566666666 667777777766666666666665 6666666666666666666666666666666666664444
Q ss_pred ccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCc
Q 002061 259 AELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNR 324 (973)
Q Consensus 259 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 324 (973)
. +..+++|++|+|++|++++.+|..+..+++|++|++++|++++.+|.. +.+++|+.+++++|+
T Consensus 239 ~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 239 K-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp G-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred c-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 3 555566666666666666556666665666666666665555555543 444444444444444
No 44
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2.1e-42 Score=398.69 Aligned_cols=408 Identities=23% Similarity=0.312 Sum_probs=250.4
Q ss_pred CceEEEeecCCCCCccccccccCCccCcEeeCCCCcccCcCChhhhCCCCC-------------cEEEecCCcccCCCCc
Q 002061 73 GRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNL-------------KVLNVTGNAMVGSVPD 139 (973)
Q Consensus 73 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L-------------~~L~L~~n~l~~~~~~ 139 (973)
.++..++++++++ |++|++++++++|++|++++|.++|.+|..++++.+| ++|++++|.+++.+..
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~~ 89 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPEL 89 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCSC
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCCC
Confidence 4678899999999 8999999999999999999999999999999988875 8899999988886652
Q ss_pred ccCCCCCCEEeccCccCCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccCCCCCCCChhhhccCCC
Q 002061 140 LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELREL 219 (973)
Q Consensus 140 l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 219 (973)
.++|++|++++|.+++ +|.. +++|++|++++|.++. +|.. .++|++|++++|++++ +| .++.+++|
T Consensus 90 ---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~--l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L 155 (454)
T 1jl5_A 90 ---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA--LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFL 155 (454)
T ss_dssp ---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC--CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTC
T ss_pred ---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc--ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCC
Confidence 3688899999998886 5543 3788888888888763 3322 2688888888888885 66 58888888
Q ss_pred CeeecccccccCCCchhhhccccccEEEeeccccCCcCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccC
Q 002061 220 GTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKN 299 (973)
Q Consensus 220 ~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 299 (973)
++|++++|++++ +|..+ .+|++|++++|++++ +| .++++++|++|++++|++++ +|... ++|+.|++++|
T Consensus 156 ~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n 225 (454)
T 1jl5_A 156 KIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNN 225 (454)
T ss_dssp CEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSS
T ss_pred CEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCC
Confidence 888888888884 55443 488888888888885 55 57888888888888888874 44433 47888888888
Q ss_pred CCCCCCCCCcCCcccceeeeccCCccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCccc
Q 002061 300 NFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPN 379 (973)
Q Consensus 300 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~ 379 (973)
+++ .+| .++.+++|+.|++++|++++ +|.. .++|++|++++|++++ +| .
T Consensus 226 ~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~------------------------~ 274 (454)
T 1jl5_A 226 ILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LP------------------------E 274 (454)
T ss_dssp CCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CC------------------------C
T ss_pred cCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cC------------------------c
Confidence 888 556 37888888888888888875 4432 3678888888888873 22 1
Q ss_pred cccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCC
Q 002061 380 SYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNL 459 (973)
Q Consensus 380 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L 459 (973)
. +++|++|++++|++++. |.. .++|+.|++++|++++.. ...++|++|++++|++++ +|.. +++|
T Consensus 275 ~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L 339 (454)
T 1jl5_A 275 L---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRSLC----DLPPSLEELNVSNNKLIE-LPAL---PPRL 339 (454)
T ss_dssp C---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSEEC----CCCTTCCEEECCSSCCSC-CCCC---CTTC
T ss_pred c---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCccc----CCcCcCCEEECCCCcccc-cccc---CCcC
Confidence 1 25788888888888752 211 257888888888887632 123578888888888875 5543 4778
Q ss_pred CEEEccCCcCCCCccccccccccCCEEEcCCccccc--CCCccccccccccchhccccccccCCCccccccCCCCeeecC
Q 002061 460 ERLILTNNNFSGKIPSALGALRQLSSLHLEENALTG--SIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLS 537 (973)
Q Consensus 460 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 537 (973)
++|++++|+++ .+|. .+++|++|+|++|++++ .+|.+++. |+.|++.+.+|.. +++|+.|+|+
T Consensus 340 ~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~ls 404 (454)
T 1jl5_A 340 ERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHVE 404 (454)
T ss_dssp CEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC---------------------
T ss_pred CEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc---cCcCCEEECC
Confidence 88888888887 4555 46788888888888887 55655543 3346666666653 4788888999
Q ss_pred CCccCC--CCChhhhcccCceEEccCCccccccCcc
Q 002061 538 GNKLTG--SIPDNLMKLKLSSIDLSENQLSGSVPLD 571 (973)
Q Consensus 538 ~N~l~~--~~p~~l~~l~L~~l~ls~N~l~~~~p~~ 571 (973)
+|++++ .+|.+ ++.|.+.+|.+.|.+|..
T Consensus 405 ~N~l~~~~~iP~s-----l~~L~~~~~~~~~~~~~~ 435 (454)
T 1jl5_A 405 TNPLREFPDIPES-----VEDLRMNSERVVDPYEFA 435 (454)
T ss_dssp ------------------------------------
T ss_pred CCcCCccccchhh-----HhheeCcCcccCCccccC
Confidence 999886 66654 455667788888777654
No 45
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.4e-42 Score=401.60 Aligned_cols=376 Identities=21% Similarity=0.205 Sum_probs=249.6
Q ss_pred CCCCEEeccCccCCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccCCCCCCCChhhhccCCCCeee
Q 002061 144 KNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLD 223 (973)
Q Consensus 144 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 223 (973)
++|++|||++|.+++..|..|.++++|++|++++|.+...--|..+.++++|++|+|++|++++..|..|+.+++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 34444444444444444444444444444444444432111134556666666666666666666666666666777777
Q ss_pred cccccccCCCchh--hhccccccEEEeeccccCCcCCcc-ccccccccEEEeeccccccccCCccCCC--CCccEEEccc
Q 002061 224 ICRNKISGEFPRS--IRKLQKLWKIELYANNLTGELPAE-LGNLTLLQEFDISSNQMYGKLPEEIGNL--KNLTVFQCFK 298 (973)
Q Consensus 224 L~~N~l~~~~~~~--l~~l~~L~~L~L~~N~l~~~~~~~-l~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~l~~ 298 (973)
|++|++++..+.. +..+++|++|+|++|++++..|.. +.++++|++|++++|++++..|..+..+ .+|+.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 7776666544433 566666666666666666554544 5566666666666666665555555544 4555555555
Q ss_pred CCCCCCCCCCcCCcccceeeeccCCccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCcc
Q 002061 299 NNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVP 378 (973)
Q Consensus 299 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p 378 (973)
|.+.+..+..++. .....+..+++|++|++++|++++..|..+....
T Consensus 190 n~l~~~~~~~~~~----------------~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~----------------- 236 (455)
T 3v47_A 190 ITLQDMNEYWLGW----------------EKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAI----------------- 236 (455)
T ss_dssp CBCTTCSTTCTTH----------------HHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHT-----------------
T ss_pred Ccccccchhhccc----------------cccccccccceeeeEecCCCcccccchhhhhccc-----------------
Confidence 5555333222110 0001123456788888888888766665554321
Q ss_pred ccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCC--CCCCCCEEEcccCCCCCCCChhhhcC
Q 002061 379 NSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIG--LSTSLSQLVLQNNRFSGELPSELGRL 456 (973)
Q Consensus 379 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~~~~L~~L~L~~N~l~~~~p~~~~~l 456 (973)
..++|+.|++++|.+.+... ..+.+.+.....+. ..++|+.|++++|++.+..|..+..+
T Consensus 237 ----~~~~L~~L~l~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l 298 (455)
T 3v47_A 237 ----AGTKIQSLILSNSYNMGSSF--------------GHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHF 298 (455)
T ss_dssp ----TTCCEEEEECTTCTTTSCCT--------------TCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTC
T ss_pred ----cccceeeEeecccccccccc--------------chhhhccCcccccccccccCceEEEecCccccccchhhcccC
Confidence 23678888888887653211 12222222222222 23678999999999988888889999
Q ss_pred CCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhccccccccCCCccccccCCCCeeec
Q 002061 457 TNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNL 536 (973)
Q Consensus 457 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 536 (973)
++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|+++++|+.|+|++|++++..|..|..+++|++|+|
T Consensus 299 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 378 (455)
T 3v47_A 299 TDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELAL 378 (455)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEEC
Confidence 99999999999998888888999999999999999998888888999999999999999999888889999999999999
Q ss_pred CCCccCCCCChhhhccc-CceEEccCCccccccCc
Q 002061 537 SGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPL 570 (973)
Q Consensus 537 ~~N~l~~~~p~~l~~l~-L~~l~ls~N~l~~~~p~ 570 (973)
++|+|++..+..+..++ |+.|+|++|+|+|.||.
T Consensus 379 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 379 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 99999976666677775 99999999999999984
No 46
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=4.2e-43 Score=413.58 Aligned_cols=253 Identities=19% Similarity=0.270 Sum_probs=210.6
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc--ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEEc
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
+++|++.+.||+|+||+||+|+++.+|+.||||++... ...+.+.+|+++|+.++|||||+++++|.++...|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 57899999999999999999999999999999998763 3456788999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCC--CCeEEecccCccccc
Q 002061 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED--YEPKIADFGVAKIAE 830 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~--~~~kl~Dfgl~~~~~ 830 (973)
|+||+|.+++... ...+++..+..++.||+.||+||| +++|+||||||+|||++.+ +.+||+|||+|+...
T Consensus 236 ~~gg~L~~~i~~~----~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 236 MSGGELFEKVADE----HNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308 (573)
T ss_dssp CCCCBHHHHHTCT----TSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred cCCCcHHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence 9999999998642 346899999999999999999999 7899999999999999854 899999999998775
Q ss_pred CCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhcc
Q 002061 831 NSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||... +.............
T Consensus 309 ~~~---~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~-----~~~~~~~~i~~~~~------- 373 (573)
T 3uto_A 309 PKQ---SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE-----NDDETLRNVKSCDW------- 373 (573)
T ss_dssp TTS---EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS-----SHHHHHHHHHTTCC-------
T ss_pred CCC---ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-----CHHHHHHHHHhCCC-------
Confidence 432 233457999999999999999999999999999999999999999653 11222222111111
Q ss_pred ccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.............+.+|+.+||+.||.+|||+.|+++|-
T Consensus 374 -~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hp 412 (573)
T 3uto_A 374 -NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHP 412 (573)
T ss_dssp -CCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHST
T ss_pred -CCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 011111223345678999999999999999999999973
No 47
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.6e-42 Score=401.28 Aligned_cols=369 Identities=18% Similarity=0.200 Sum_probs=285.6
Q ss_pred CCCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCC-chhhhccccccEEEeeccccCCcCCccccccccccEEE
Q 002061 193 KNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEF-PRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFD 271 (973)
Q Consensus 193 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 271 (973)
++|++|+|++|++++..|..|+++++|++|+|++|.+.+.+ +..|.++++|++|+|++|++++..|..|.++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 56777777777777666777777777777777777776444 45677777777777777777766677777777777777
Q ss_pred eeccccccccCCc--cCCCCCccEEEcccCCCCCCCCCC-cCCcccceeeeccCCccCCCCCcccccc--cccccccccc
Q 002061 272 ISSNQMYGKLPEE--IGNLKNLTVFQCFKNNFSGEFPSG-FGDMRKLFAFSIYGNRFSGPFPENLGRY--TALTDVDISE 346 (973)
Q Consensus 272 Ls~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~~~~l~~l--~~L~~L~Ls~ 346 (973)
|++|++++..|.. +.++++|++|++++|++++..|.. +..+++|+.|++++|++++..+..+..+ .+|+.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 7777777644443 777777777777777777766665 6777888888888888877777777766 6788888888
Q ss_pred ccccccCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCccccCC---CCcceEeccCCcCCC
Q 002061 347 NQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWAL---PNVGMLDFGDNDFTG 423 (973)
Q Consensus 347 N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~ 423 (973)
|.+.+..+..+.. .....+..+++|++|+|++|++++..|..+... ++|+.|++++|.+.+
T Consensus 190 n~l~~~~~~~~~~----------------~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~ 253 (455)
T 3v47_A 190 ITLQDMNEYWLGW----------------EKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMG 253 (455)
T ss_dssp CBCTTCSTTCTTH----------------HHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTS
T ss_pred Ccccccchhhccc----------------cccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccc
Confidence 8887544433221 112234567899999999999998888877664 789999999988764
Q ss_pred CCCCCCCCCCCCCEEEcccCCCCCCCChhhhcC--CCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccc
Q 002061 424 GISPLIGLSTSLSQLVLQNNRFSGELPSELGRL--TNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEM 501 (973)
Q Consensus 424 ~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 501 (973)
.. +..+.+.+..+..+..+ ++|++|++++|++++..|..|..+++|++|+|++|++++..|..|
T Consensus 254 ~~--------------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 319 (455)
T 3v47_A 254 SS--------------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAF 319 (455)
T ss_dssp CC--------------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTT
T ss_pred cc--------------cchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHh
Confidence 32 22334444444445443 689999999999999999999999999999999999999999999
Q ss_pred cccccccchhccccccccCCCccccccCCCCeeecCCCccCCCCChhhhccc-CceEEccCCccccccCcccccCCC--C
Q 002061 502 GDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLDFLRMGG--D 578 (973)
Q Consensus 502 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-L~~l~ls~N~l~~~~p~~~~~~~~--~ 578 (973)
.++++|+.|+|++|++++..|..|..+++|++|+|++|++++.+|..+..++ |+.|+|++|++++..+..+..+.. .
T Consensus 320 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 399 (455)
T 3v47_A 320 WGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQK 399 (455)
T ss_dssp TTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred cCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccE
Confidence 9999999999999999988899999999999999999999988899998886 999999999999765544444433 2
Q ss_pred ccccCCCCCccCc
Q 002061 579 GAFAGNEGLCLDQ 591 (973)
Q Consensus 579 ~~~~~n~~lc~~~ 591 (973)
-.+.+|+.-|..|
T Consensus 400 L~l~~N~l~~~~~ 412 (455)
T 3v47_A 400 IWLHTNPWDCSCP 412 (455)
T ss_dssp EECCSSCBCCCTT
T ss_pred EEccCCCcccCCC
Confidence 3578998888665
No 48
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=5.9e-42 Score=394.88 Aligned_cols=398 Identities=22% Similarity=0.284 Sum_probs=235.4
Q ss_pred ccccCCccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCCCC-cccCCCCC-------------CEEeccCccC
Q 002061 91 SSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP-DLSALKNL-------------EIFDLSINYF 156 (973)
Q Consensus 91 ~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~-~l~~l~~L-------------~~L~Ls~n~l 156 (973)
+.-...++|++|++++|.+ +.+|.+|+++++|++|++++|.+.+..| .++.+++| ++|++++|.+
T Consensus 5 p~~~~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l 83 (454)
T 1jl5_A 5 PRNVSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGL 83 (454)
T ss_dssp ------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCC
T ss_pred ccccccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcc
Confidence 3334568999999999999 7999999999999999999999986554 58888875 8888888888
Q ss_pred CCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchh
Q 002061 157 TGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRS 236 (973)
Q Consensus 157 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 236 (973)
++ +|.. .++|++|++++|.++. +|.. +++|++|++++|++++ +|.. .++|++|++++|++++ +| .
T Consensus 84 ~~-lp~~---~~~L~~L~l~~n~l~~--lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~ 148 (454)
T 1jl5_A 84 SS-LPEL---PPHLESLVASCNSLTE--LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-E 148 (454)
T ss_dssp SC-CCSC---CTTCSEEECCSSCCSS--CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-C
T ss_pred cc-CCCC---cCCCCEEEccCCcCCc--cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-c
Confidence 75 3332 3678888888888764 5543 3678888888888874 3321 1578888888888875 66 5
Q ss_pred hhccccccEEEeeccccCCcCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccce
Q 002061 237 IRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLF 316 (973)
Q Consensus 237 l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 316 (973)
++++++|++|++++|++++ +|..+ ++|++|++++|++++ +| .++++++|+.|++++|++++ +|... ++|+
T Consensus 149 ~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~ 218 (454)
T 1jl5_A 149 LQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLE 218 (454)
T ss_dssp CTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCC
T ss_pred cCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---Cccc
Confidence 7888888888888888874 55433 478888888888875 55 57788888888888888875 34322 4778
Q ss_pred eeeccCCccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccc
Q 002061 317 AFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNH 396 (973)
Q Consensus 317 ~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~ 396 (973)
.|++++|.++ .+| .++.+++|++|++++|++++ +| .. +++|++|++++|+
T Consensus 219 ~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~------------------------~~---~~~L~~L~l~~N~ 268 (454)
T 1jl5_A 219 SIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LP------------------------DL---PPSLEALNVRDNY 268 (454)
T ss_dssp EEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CC------------------------SC---CTTCCEEECCSSC
T ss_pred EEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cc------------------------cc---ccccCEEECCCCc
Confidence 8888888887 555 37778888888888887763 22 11 2567888888888
Q ss_pred cccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcC-CCCCEEEccCCcCCCCccc
Q 002061 397 LSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRL-TNLERLILTNNNFSGKIPS 475 (973)
Q Consensus 397 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~ 475 (973)
+++ +|.. .++|+.|++++|++++... ..++|++|++++|++++ ++ .+ ++|++|++++|++++ +|.
T Consensus 269 l~~-l~~~---~~~L~~L~ls~N~l~~l~~----~~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~ 334 (454)
T 1jl5_A 269 LTD-LPEL---PQSLTFLDVSENIFSGLSE----LPPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPA 334 (454)
T ss_dssp CSC-CCCC---CTTCCEEECCSSCCSEESC----CCTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCC
T ss_pred ccc-cCcc---cCcCCEEECcCCccCcccC----cCCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-ccc
Confidence 875 4443 3677888888888776321 13577888888887774 22 23 477888888888875 444
Q ss_pred cccccccCCEEEcCCcccccCCCccccccccccchhcccccccc--CCCccccccCCCCeeecCCCccCCCCChhhhccc
Q 002061 476 ALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSG--NIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK 553 (973)
Q Consensus 476 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 553 (973)
. +++|++|++++|++++ +|. .+++|+.|++++|++++ .+|.++.. |+.|++.|.+|..+ ..
T Consensus 335 ~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~~--~~ 397 (454)
T 1jl5_A 335 L---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPELP--QN 397 (454)
T ss_dssp C---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC-------------
T ss_pred c---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhccccccccccc--Cc
Confidence 3 4677888888888774 444 36777888888888876 55655443 33466667777642 24
Q ss_pred CceEEccCCcccc--ccCcccccC
Q 002061 554 LSSIDLSENQLSG--SVPLDFLRM 575 (973)
Q Consensus 554 L~~l~ls~N~l~~--~~p~~~~~~ 575 (973)
|+.|++++|+++| .+|..+...
T Consensus 398 L~~L~ls~N~l~~~~~iP~sl~~L 421 (454)
T 1jl5_A 398 LKQLHVETNPLREFPDIPESVEDL 421 (454)
T ss_dssp ------------------------
T ss_pred CCEEECCCCcCCccccchhhHhhe
Confidence 8999999999998 888765433
No 49
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=5.6e-42 Score=378.78 Aligned_cols=279 Identities=34% Similarity=0.528 Sum_probs=229.2
Q ss_pred HHHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc--ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEE
Q 002061 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
....++|++.+.||+|+||+||+|++. +++.||||++... ...+.+.+|++++++++||||+++++++..++..++|
T Consensus 35 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (321)
T 2qkw_B 35 EEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILI 113 (321)
T ss_dssp CCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEE
T ss_pred HHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence 345679999999999999999999975 4889999987653 3457789999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccc
Q 002061 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++|+|.+++... ......+++..+..++.|+++||+||| +++++||||||+||+++.++.+||+|||+++..
T Consensus 114 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 189 (321)
T 2qkw_B 114 YKYMENGNLKRHLYGS-DLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKG 189 (321)
T ss_dssp EECCTTCBTGGGSSSS-CCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTTCEEC
T ss_pred EEcCCCCcHHHHHhcc-CCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeeccccccc
Confidence 9999999999988653 222345899999999999999999999 789999999999999999999999999999865
Q ss_pred cCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCC-cccHHHHHHHHhccccccchh
Q 002061 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGD-GKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 908 (973)
.............||+.|+|||++.+..++.++|||||||++|||++|+.||...... ......|...... ...+...
T Consensus 190 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 268 (321)
T 2qkw_B 190 TELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN-NGQLEQI 268 (321)
T ss_dssp SSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHT-TTCCCSS
T ss_pred ccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccc-cccHHHh
Confidence 4433323333456899999999999889999999999999999999999999764322 2334444333222 2223445
Q ss_pred ccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCC
Q 002061 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPC 956 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 956 (973)
+++........+....+.+++.+||+.||++|||+.|++++|+.+...
T Consensus 269 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp SSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred cChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 555555555677888999999999999999999999999999976543
No 50
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=3.5e-41 Score=373.35 Aligned_cols=282 Identities=39% Similarity=0.670 Sum_probs=231.1
Q ss_pred HHHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc---cHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEE
Q 002061 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
....++|++.+.||+|+||+||+|+.. +++.||||++.... ....+.+|++++++++||||+++++++..++..++
T Consensus 26 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 104 (326)
T 3uim_A 26 QVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 104 (326)
T ss_dssp HTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEE
T ss_pred HHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEE
Confidence 445678999999999999999999865 48899999987632 33468899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccc
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++... ......+++..+..++.|++.||+|||+.+..+|+||||||+||+++.++.+||+|||+++.
T Consensus 105 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~ 183 (326)
T 3uim_A 105 VYPYMANGSVASCLRER-PESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 183 (326)
T ss_dssp EEECCTTCBHHHHHHCC-STTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred EEEeccCCCHHHHHHhc-cccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccc
Confidence 99999999999999864 22344589999999999999999999943333999999999999999999999999999987
Q ss_pred ccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcc---cCCcccHHHHHHHHhcccccc
Q 002061 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEE---YGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~---~~~~~~~~~~~~~~~~~~~~~ 905 (973)
...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||... .........++....... ..
T Consensus 184 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~ 261 (326)
T 3uim_A 184 MDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK-KL 261 (326)
T ss_dssp CCSSSS-CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSC-CS
T ss_pred cCcccc-cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhch-hh
Confidence 654322 2223356899999999999889999999999999999999999999642 123334455554443332 24
Q ss_pred chhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCC
Q 002061 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCT 957 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 957 (973)
....+.........+....+.+++.+||+.||.+|||+.||+++|++.....
T Consensus 262 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~~ 313 (326)
T 3uim_A 262 EALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAE 313 (326)
T ss_dssp TTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCSS
T ss_pred hhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchhh
Confidence 5555666656667788889999999999999999999999999999865544
No 51
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1e-40 Score=363.86 Aligned_cols=251 Identities=23% Similarity=0.348 Sum_probs=208.5
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeec--cccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEEc
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK--GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
..+|++.+.||+|+||+||+|++..+++.||||++.. ....+.+.+|+.++++++||||+++++++..++..|+||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 4689999999999999999999999999999999865 34566788999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccCC
Q 002061 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
+++|+|.+++... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++......
T Consensus 99 ~~~~~L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (297)
T 3fxz_A 99 LAGGSLTDVVTET------CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (297)
T ss_dssp CTTCBHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred CCCCCHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence 9999999999753 4788999999999999999999 789999999999999999999999999999866543
Q ss_pred CCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhcccc
Q 002061 833 PKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+... ....
T Consensus 170 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~~~~~--~~~~-------- 235 (297)
T 3fxz_A 170 QS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN--PLRALYLIATN--GTPE-------- 235 (297)
T ss_dssp TC--CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHH--CSCC--------
T ss_pred cc--ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHhC--CCCC--------
Confidence 22 2334579999999999999999999999999999999999999996531 11111111110 0000
Q ss_pred ccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
...+......+.+++.+||+.||++|||+.|++++-
T Consensus 236 --~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~ 271 (297)
T 3fxz_A 236 --LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQ 271 (297)
T ss_dssp --CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCG
T ss_pred --CCCccccCHHHHHHHHHHccCChhHCcCHHHHhhCh
Confidence 011223345688899999999999999999999864
No 52
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=5.4e-41 Score=377.42 Aligned_cols=261 Identities=27% Similarity=0.386 Sum_probs=213.2
Q ss_pred HcCCcccCcccccCceEEEEEEec-------CCCcEEEEEeeecc---ccHHHHHHHHHHHHhc-CCCceeeEEEEEEeC
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLK-------KNAGTVAVKQLWKG---DGVKVFAAEMEILGKI-RHRNILKLYACLLKG 743 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~-------~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~ 743 (973)
.++|++.+.||+|+||+||+|++. .++..||||++... ...+.+.+|+++++++ +||||+++++++..+
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 357889999999999999999974 34567999998763 3446788999999999 899999999999999
Q ss_pred CeeEEEEEccCCCchHHHHHhhhcC-----------CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeee
Q 002061 744 GSSFLVLEYMPNGNLFQALHKRVKE-----------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL 812 (973)
Q Consensus 744 ~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill 812 (973)
+..|+||||+++|+|.+++...... ....+++..+..++.|+++||+||| +++|+||||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEE
Confidence 9999999999999999999864211 1235789999999999999999999 7899999999999999
Q ss_pred cCCCCeEEecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccH
Q 002061 813 DEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDI 891 (973)
Q Consensus 813 ~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~ 891 (973)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||... .....
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~--~~~~~ 314 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEEL 314 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CGGGH
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCC--CHHHH
Confidence 9999999999999987655443333444567889999999999999999999999999999999 99999754 22222
Q ss_pred HHHHHHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002061 892 VYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
...+.... ....+......+.+++.+||+.||++||++.|++++|+++.
T Consensus 315 ~~~~~~~~--------------~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 315 FKLLKEGH--------------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp HHHHHTTC--------------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhcCC--------------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 22221110 01111223456889999999999999999999999998764
No 53
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=4.3e-41 Score=371.54 Aligned_cols=263 Identities=25% Similarity=0.297 Sum_probs=207.8
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc-cHHHHHHHHHHHHhcCCCceeeEEEEEEeCC----eeEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-GVKVFAAEMEILGKIRHRNILKLYACLLKGG----SSFLV 749 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----~~~lv 749 (973)
..+|++.+.||+|+||+||+|++. ++.||||++.... ....+.+|+.++++++||||+++++++..+. ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 467899999999999999999887 7899999986532 3345567889999999999999999998754 46999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCC----------CeEecCCCCCCeeecCCCCeE
Q 002061 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSP----------PIIHRDIKSSNILLDEDYEPK 819 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~----------~ivH~Dlkp~Nill~~~~~~k 819 (973)
|||+++|+|.++++.. .+++..+..++.|+++||+||| +. +|+||||||+||+++.++.+|
T Consensus 101 ~e~~~~g~L~~~l~~~------~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~k 171 (322)
T 3soc_A 101 TAFHEKGSLSDFLKAN------VVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC 171 (322)
T ss_dssp EECCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEE
T ss_pred EecCCCCCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEE
Confidence 9999999999999753 4899999999999999999999 77 999999999999999999999
Q ss_pred EecccCcccccCCCCcccccccCCcccccccccccc-----CCCCccchHHHHHHHHHHHHhCCCCCCcccCCcc-----
Q 002061 820 IADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYT-----CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGK----- 889 (973)
Q Consensus 820 l~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~----- 889 (973)
|+|||+++...............||+.|+|||++.+ ..++.++|||||||++|||++|+.||........
T Consensus 172 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~ 251 (322)
T 3soc_A 172 IADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEE 251 (322)
T ss_dssp ECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHH
T ss_pred EccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhh
Confidence 999999987765444333444679999999999876 3566789999999999999999999976432211
Q ss_pred ------cHHHHHHHHhccccccchhccccccC-cchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002061 890 ------DIVYWVSTHLNNHENVLKVLDCEVAS-ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 890 ------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
....+......... .+.... .........+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 317 (322)
T 3soc_A 252 EIGQHPSLEDMQEVVVHKKK------RPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQ 317 (322)
T ss_dssp HHCSSCCHHHHHHHHTTSCC------CCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhccCCchhhhhhhhhcccC------CCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11111111111110 011100 012234567899999999999999999999999998764
No 54
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=3.2e-40 Score=364.25 Aligned_cols=249 Identities=26% Similarity=0.335 Sum_probs=208.0
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
+++|++.+.||+|+||+||+|++..+|+.||||++... ...+.+.+|+++++.++||||+++++++..++..|+||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 56899999999999999999999999999999998653 34456789999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccccc
Q 002061 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++|+|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 94 e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 94 EYASGGEVFDYLVAH-----GRMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165 (328)
T ss_dssp CCCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred ECCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence 999999999999764 34889999999999999999999 7899999999999999999999999999998665
Q ss_pred CCCCcccccccCCccccccccccccCCCC-ccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhc
Q 002061 831 NSPKVSDYSCFAGTHGYIAPELAYTCKVS-EKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
... ......||+.|+|||++.+..+. .++||||+||++|||++|+.||... +...............
T Consensus 166 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~-----~~~~~~~~i~~~~~~~---- 233 (328)
T 3fe3_A 166 VGG---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ-----NLKELRERVLRGKYRI---- 233 (328)
T ss_dssp SSC---GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCC----
T ss_pred CCC---ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCCCC----
Confidence 432 23345799999999999888775 7899999999999999999999653 2222222221111110
Q ss_pred cccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
+......+.+++.+|++.||.+|||+.|+++|-.
T Consensus 234 --------p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~ 267 (328)
T 3fe3_A 234 --------PFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRW 267 (328)
T ss_dssp --------CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTT
T ss_pred --------CCCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHh
Confidence 1112345778999999999999999999998743
No 55
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=7.8e-41 Score=367.69 Aligned_cols=260 Identities=26% Similarity=0.408 Sum_probs=210.5
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeec--cccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEEc
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK--GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
.++|++.+.||+|+||+||+|++..+++.||+|++.. ....+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 3578889999999999999999999999999998755 34556789999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccCC
Q 002061 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
+++|+|.+++... ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 89 ~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 161 (310)
T 3s95_A 89 IKGGTLRGIIKSM----DSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDE 161 (310)
T ss_dssp CTTCBHHHHHHHC----CTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC--
T ss_pred cCCCcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceecccc
Confidence 9999999999863 346899999999999999999999 789999999999999999999999999999866433
Q ss_pred CCcc------------cccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhc
Q 002061 833 PKVS------------DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLN 900 (973)
Q Consensus 833 ~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 900 (973)
.... ......||+.|+|||++.+..++.++||||||+++|||++|..||................
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~--- 238 (310)
T 3s95_A 162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRG--- 238 (310)
T ss_dssp ------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHH---
T ss_pred cccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhc---
Confidence 2211 1113579999999999999999999999999999999999999987542211110000000
Q ss_pred cccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002061 901 NHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
..+... +......+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 239 -------~~~~~~----~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~ 282 (310)
T 3s95_A 239 -------FLDRYC----PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM 282 (310)
T ss_dssp -------HHHHTC----CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -------cccccC----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 000000 11123457889999999999999999999999998753
No 56
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=8.2e-40 Score=377.32 Aligned_cols=365 Identities=19% Similarity=0.203 Sum_probs=242.4
Q ss_pred CCCccccccccCCccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCCCCcccCCCCCCEEeccCccCCCccccc
Q 002061 84 SLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRW 163 (973)
Q Consensus 84 ~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~ 163 (973)
+..+..+..++.+++|++|+|++|.+++ +| .++.+++|++|+|++|++++.+ ++.+++|++|++++|.+++. +
T Consensus 29 ~~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~~--~~~l~~L~~L~Ls~N~l~~~-~-- 101 (457)
T 3bz5_A 29 EMQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTLD--LSQNTNLTYLACDSNKLTNL-D-- 101 (457)
T ss_dssp TCCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCCC--CTTCTTCSEEECCSSCCSCC-C--
T ss_pred CcCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeEc--cccCCCCCEEECcCCCCcee-e--
Confidence 4445556678888888888888888885 45 6888888888888888888863 78888888888888888864 3
Q ss_pred cccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccc
Q 002061 164 VVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKL 243 (973)
Q Consensus 164 ~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L 243 (973)
+.++++|++|++++|.++. +| ++.+++|++|++++|++++. + ++.+++|++|++++|+..+.+ .+..+++|
T Consensus 102 ~~~l~~L~~L~L~~N~l~~--l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L 172 (457)
T 3bz5_A 102 VTPLTKLTYLNCDTNKLTK--LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQL 172 (457)
T ss_dssp CTTCTTCCEEECCSSCCSC--CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTC
T ss_pred cCCCCcCCEEECCCCcCCe--ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcC
Confidence 7788888888888888764 33 77788888888888888863 2 777888888888888544444 46777788
Q ss_pred cEEEeeccccCCcCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCC
Q 002061 244 WKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGN 323 (973)
Q Consensus 244 ~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 323 (973)
++|++++|++++ +| +..+++|+.|++++|++++. .++.+++|+.|++++|++++ +| ++.+++|+.|++++|
T Consensus 173 ~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N 243 (457)
T 3bz5_A 173 TTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVN 243 (457)
T ss_dssp CEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSS
T ss_pred CEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCC
Confidence 888888888875 44 67777788888888877754 36777777777777777776 44 667777777777777
Q ss_pred ccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCc
Q 002061 324 RFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPD 403 (973)
Q Consensus 324 ~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 403 (973)
++++.. ++.+++|+.|++++|++ +.|++++|.+.+.+|
T Consensus 244 ~l~~~~---~~~l~~L~~L~l~~n~L--------------------------------------~~L~l~~n~~~~~~~- 281 (457)
T 3bz5_A 244 PLTELD---VSTLSKLTTLHCIQTDL--------------------------------------LEIDLTHNTQLIYFQ- 281 (457)
T ss_dssp CCSCCC---CTTCTTCCEEECTTCCC--------------------------------------SCCCCTTCTTCCEEE-
T ss_pred cCCCcC---HHHCCCCCEEeccCCCC--------------------------------------CEEECCCCccCCccc-
Confidence 777643 34455566666655433 344555555544444
Q ss_pred cccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccC
Q 002061 404 GLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQL 483 (973)
Q Consensus 404 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 483 (973)
+..+++|+.|++++|...+.++. ...+|+.|++++| ++|++|+|++|++++. + ++.+++|
T Consensus 282 -~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L 341 (457)
T 3bz5_A 282 -AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTKL 341 (457)
T ss_dssp -CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTTC
T ss_pred -ccccccCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCCccccc-c--cccCCcC
Confidence 23445555555555544333221 1233343333333 4666666666666653 2 6666666
Q ss_pred CEEEcCCcccccCCCccccccccccchhccccccccCCCccccccCCCCeeecCCCccCCCCChh
Q 002061 484 SSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDN 548 (973)
Q Consensus 484 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 548 (973)
+.|++++|+|++ ++.|..|++++|+++|. ..+..|+.++|++|+|+|.+|..
T Consensus 342 ~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 342 KSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp SEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTT
T ss_pred cEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChh
Confidence 666766666664 23455666666666654 23444555555555555555544
No 57
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=3.7e-41 Score=369.22 Aligned_cols=264 Identities=31% Similarity=0.476 Sum_probs=201.1
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
.++|++.+.||+|+||+||+|++. ++.||||++... ...+.+.+|++++++++||||+++++++..++..++||
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEEC--CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 467899999999999999999874 789999998653 23456889999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCC--eEecCCCCCCeeecCCCCeEEecccCccc
Q 002061 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPP--IIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||+++|+|.+++.... ....+++..+..++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 114 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 188 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSG--AREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL 188 (309)
T ss_dssp ECCTTCBHHHHHHSTT--HHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC----
T ss_pred ecCCCCcHHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCcc
Confidence 9999999999997531 1224889999999999999999999 778 99999999999999999999999999975
Q ss_pred ccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchh
Q 002061 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..............
T Consensus 189 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~-----~~~~~~~~~~~~~~---- 257 (309)
T 3p86_A 189 KASTF--LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN-----PAQVVAAVGFKCKR---- 257 (309)
T ss_dssp ---------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC-----HHHHHHHHHHSCCC----
T ss_pred ccccc--cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhcCCC----
Confidence 43321 12234568999999999999999999999999999999999999997541 11111111111100
Q ss_pred ccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCCCCCCC
Q 002061 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCTDKSPD 962 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~~~ 962 (973)
...+......+.+++.+||+.||++|||+.|+++.|+.+.....+++.
T Consensus 258 ------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~~~ 305 (309)
T 3p86_A 258 ------LEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPN 305 (309)
T ss_dssp ------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-------
T ss_pred ------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCCCC
Confidence 011122334688999999999999999999999999988765544443
No 58
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.2e-40 Score=365.18 Aligned_cols=253 Identities=26% Similarity=0.366 Sum_probs=201.3
Q ss_pred HHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEE
Q 002061 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
...++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++...+..|+|
T Consensus 7 ~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv 86 (347)
T 3zgw_A 7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMV 86 (347)
T ss_dssp TTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEE
Confidence 3457899999999999999999999999999999998663 3345788999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccc
Q 002061 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++|+|.+++... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 87 ~E~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~ 158 (347)
T 3zgw_A 87 LEYCPGGELFDYIISQ-----DRLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKP 158 (347)
T ss_dssp EECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC-
T ss_pred EeCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCcccc
Confidence 9999999999999764 35899999999999999999999 789999999999999999999999999998765
Q ss_pred cCCCCcccccccCCccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchh
Q 002061 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKV-SEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
..... .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||... +...............
T Consensus 159 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~-----~~~~~~~~i~~~~~~~--- 229 (347)
T 3zgw_A 159 KGNKD-YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDD-----NVMALYKKIMRGKYDV--- 229 (347)
T ss_dssp --------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHTCCCC---
T ss_pred cCCCC-ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHcCCCCC---
Confidence 43221 12234578999999999988775 88999999999999999999999653 2222222221111111
Q ss_pred ccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
+......+.+++.+||+.||++|||+.|++++-.
T Consensus 230 ---------p~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp~ 263 (347)
T 3zgw_A 230 ---------PKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPW 263 (347)
T ss_dssp ---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCHH
T ss_pred ---------CCCCCHHHHHHHHHHcccCHhHCcCHHHHhcCcc
Confidence 1112345778999999999999999999998754
No 59
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.2e-40 Score=365.48 Aligned_cols=255 Identities=25% Similarity=0.343 Sum_probs=208.3
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc---cHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
.++|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|+.+++.++||||+++++++.+++..|+|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999999999999999986532 23567899999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccC
Q 002061 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|+++|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 86 ~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 157 (323)
T 3tki_A 86 YCSGGELFDRIEP-----DIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (323)
T ss_dssp CCTTEEGGGGSBT-----TTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred cCCCCcHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceecc
Confidence 9999999988864 345899999999999999999999 78999999999999999999999999999986654
Q ss_pred CCCcccccccCCccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhcc
Q 002061 832 SPKVSDYSCFAGTHGYIAPELAYTCKV-SEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
...........||+.|+|||++.+..+ +.++||||+||++|||++|+.||............+... ...
T Consensus 158 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~----~~~------ 227 (323)
T 3tki_A 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK----KTY------ 227 (323)
T ss_dssp TTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTT----CTT------
T ss_pred CCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcc----ccc------
Confidence 433333345679999999999987775 678999999999999999999997653322222222111 000
Q ss_pred ccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
..........+.+++.+|++.||++|||+.|++++-.
T Consensus 228 ----~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~ 264 (323)
T 3tki_A 228 ----LNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 264 (323)
T ss_dssp ----STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTT
T ss_pred ----CCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChh
Confidence 0011223456778999999999999999999998754
No 60
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=9.1e-40 Score=355.89 Aligned_cols=261 Identities=26% Similarity=0.340 Sum_probs=208.8
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
.++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|+.++++++||||+++++++..++..|+|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 46799999999999999999999999999999987542 3346788999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccc
Q 002061 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 90 ~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 161 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESH-----GPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL 161 (294)
T ss_dssp EECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC
T ss_pred EeCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCcccc
Confidence 9999999999999764 25889999999999999999999 789999999999999999999999999999866
Q ss_pred cCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccc-cccchh
Q 002061 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH-ENVLKV 908 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 908 (973)
..... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||.... ............ +...
T Consensus 162 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~-----~~~~~~~~~~~~~~~~~-- 233 (294)
T 4eqm_A 162 SETSL-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET-----AVSIAIKHIQDSVPNVT-- 233 (294)
T ss_dssp --------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC-----HHHHHHHHHSSCCCCHH--
T ss_pred ccccc-cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHhhccCCCcc--
Confidence 43322 12233568999999999999999999999999999999999999996541 111111111111 1100
Q ss_pred ccccccCcchHHHHHHHHHHHHHhcCCCCCCCC-CHHHHHHHhhcCCCCC
Q 002061 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRP-PMREVVKMLADADPCT 957 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-t~~evl~~L~~~~~~~ 957 (973)
..........+.+++.+|++.||.+|| +++++.+.|+.+....
T Consensus 234 ------~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 234 ------TDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp ------HHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred ------hhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 011122345688899999999999998 9999999999876544
No 61
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=368.39 Aligned_cols=261 Identities=26% Similarity=0.414 Sum_probs=209.6
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCc---EEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAG---TVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~---~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
..+|++.+.||+|+||+||+|++..+++ .||||++... ...+.+.+|++++++++||||+++++++.+++..|+
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 4678999999999999999999975444 5999998753 345678899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccc
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 128 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 200 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTH----DGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV 200 (325)
T ss_dssp EEECCTTCBHHHHHHTT----TTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred EeeCCCCCcHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccc
Confidence 99999999999999753 346899999999999999999999 78999999999999999999999999999987
Q ss_pred ccCCCCc-ccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccccc
Q 002061 829 AENSPKV-SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 829 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.... .......+. ....
T Consensus 201 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~--~~~~~~~~~---~~~~--- 272 (325)
T 3kul_A 201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT--NRDVISSVE---EGYR--- 272 (325)
T ss_dssp CC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSC--HHHHHHHHH---TTCC---
T ss_pred cccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCC--HHHHHHHHH---cCCC---
Confidence 6543221 12223456788999999998999999999999999999999 999996541 111111111 1100
Q ss_pred hhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCCC
Q 002061 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCTD 958 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~ 958 (973)
..........+.+++.+||+.||++||++.|+++.|+.+....+
T Consensus 273 --------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 273 --------LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp --------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred --------CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 01112234568899999999999999999999999999865443
No 62
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.3e-39 Score=360.34 Aligned_cols=249 Identities=27% Similarity=0.331 Sum_probs=207.6
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
.++|++.+.||+|+||+||+|+...+++.||||++.+. .....+.+|+++++.++||||+++++++...+..|+|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 46789999999999999999999999999999998752 3456788999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccc
Q 002061 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++|+|.+++... ..+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 84 ~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 155 (337)
T 1o6l_A 84 MEYANGGELFFHLSRE-----RVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG 155 (337)
T ss_dssp EECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhc
Confidence 9999999999999754 35789999999999999999999 789999999999999999999999999999754
Q ss_pred cCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhc
Q 002061 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||... +..............
T Consensus 156 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~-----~~~~~~~~i~~~~~~----- 223 (337)
T 1o6l_A 156 ISDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-----DHERLFELILMEEIR----- 223 (337)
T ss_dssp CCTT--CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCC-----
T ss_pred ccCC--CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCC-----CHHHHHHHHHcCCCC-----
Confidence 3221 1223457899999999999999999999999999999999999999653 112222222111110
Q ss_pred cccccCcchHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHh
Q 002061 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRP-----PMREVVKML 950 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~L 950 (973)
. +......+.+++.+|++.||++|| ++.|+++|-
T Consensus 224 ---~----p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~ 262 (337)
T 1o6l_A 224 ---F----PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHR 262 (337)
T ss_dssp ---C----CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred ---C----CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCC
Confidence 0 112345678899999999999999 899998863
No 63
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=358.12 Aligned_cols=272 Identities=23% Similarity=0.288 Sum_probs=214.2
Q ss_pred cCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCC--eeEEEE
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGG--SSFLVL 750 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--~~~lv~ 750 (973)
.+|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++.... ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 5788999999999999999999999999999998752 34567889999999999999999999988755 789999
Q ss_pred EccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeee----cCCCCeEEecccCc
Q 002061 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL----DEDYEPKIADFGVA 826 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill----~~~~~~kl~Dfgl~ 826 (973)
||+++|+|.+++.... ....+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||++
T Consensus 89 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPS--NAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp ECCTTCBHHHHHHSGG--GTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred eCCCCCCHHHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 9999999999998642 2233899999999999999999999 7899999999999999 77788999999999
Q ss_pred ccccCCCCcccccccCCccccccccccc--------cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHH
Q 002061 827 KIAENSPKVSDYSCFAGTHGYIAPELAY--------TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTH 898 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~ 898 (973)
+....... .....||+.|+|||++. +..++.++|||||||++|||++|+.||.................
T Consensus 164 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 240 (319)
T 4euu_A 164 RELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240 (319)
T ss_dssp EECCTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHH
T ss_pred eecCCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHh
Confidence 87654322 23356899999999986 57789999999999999999999999975432222221111111
Q ss_pred hccccc-cc---hhc--------cccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002061 899 LNNHEN-VL---KVL--------DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 899 ~~~~~~-~~---~~~--------~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
...... .. ... +..............+.+++.+|++.||++|||++|++++..+...
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp HHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred cCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence 111000 00 000 0011112345667788999999999999999999999999987653
No 64
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=5.7e-41 Score=378.70 Aligned_cols=257 Identities=25% Similarity=0.326 Sum_probs=208.9
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
.++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++..++..|+|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 35788999999999999999999988999999998753 233467899999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccC
Q 002061 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|+++|+|.+++... ...+++..+..++.|+++||+||| +++++||||||+||+++.++.+||+|||+++....
T Consensus 193 ~~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~ 265 (377)
T 3cbl_A 193 LVQGGDFLTFLRTE----GARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265 (377)
T ss_dssp CCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred cCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence 99999999999864 235789999999999999999999 78999999999999999999999999999976543
Q ss_pred CCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccccchhcc
Q 002061 832 SPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
...........++..|+|||++.+..++.++|||||||++|||++ |..||.... .......+. ....
T Consensus 266 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~--~~~~~~~~~----~~~~------ 333 (377)
T 3cbl_A 266 GVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS--NQQTREFVE----KGGR------ 333 (377)
T ss_dssp SEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC--HHHHHHHHH----TTCC------
T ss_pred CceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHH----cCCC------
Confidence 221111122335778999999998899999999999999999998 999997541 111111111 1110
Q ss_pred ccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002061 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
...+......+.+++.+||+.||++|||+.++++.|+++.
T Consensus 334 ----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 373 (377)
T 3cbl_A 334 ----LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373 (377)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 0111123456888999999999999999999999998764
No 65
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.1e-40 Score=362.83 Aligned_cols=254 Identities=22% Similarity=0.257 Sum_probs=209.6
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEEcc
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.++|++.+.||+|+||+||+|++..+++.||+|++... .....+.+|+++++.++||||+++++++.+.+..++||||+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 83 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI 83 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence 35789999999999999999999999999999988653 34556889999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecC--CCCeEEecccCcccccC
Q 002061 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE--DYEPKIADFGVAKIAEN 831 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~--~~~~kl~Dfgl~~~~~~ 831 (973)
++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+++....
T Consensus 84 ~g~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~ 156 (321)
T 1tki_A 84 SGLDIFERINTS----AFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp CCCBHHHHHTSS----SCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred CCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC
Confidence 999999998642 345899999999999999999999 789999999999999987 78999999999987654
Q ss_pred CCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhccc
Q 002061 832 SPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDC 911 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
.. ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.... ..............
T Consensus 157 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~i~~~~~~------- 221 (321)
T 1tki_A 157 GD---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET-----NQQIIENIMNAEYT------- 221 (321)
T ss_dssp TC---EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHHTCCC-------
T ss_pred CC---ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC-----HHHHHHHHHcCCCC-------
Confidence 32 2234568999999999998889999999999999999999999996531 11222211111110
Q ss_pred cccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 912 EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 912 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
............+.+++.+|++.||.+|||+.|+++|-.
T Consensus 222 -~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~ 260 (321)
T 1tki_A 222 -FDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPW 260 (321)
T ss_dssp -CCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred -CChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChh
Confidence 001111233456889999999999999999999999754
No 66
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=8.8e-40 Score=364.98 Aligned_cols=253 Identities=23% Similarity=0.267 Sum_probs=208.5
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc--------cHHHHHHHHHHHHhcCCCceeeEEEEEEeCCee
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD--------GVKVFAAEMEILGKIRHRNILKLYACLLKGGSS 746 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 746 (973)
.++|++.+.||+|+||+||+|++..+|+.||||++.... ..+.+.+|++++++++||||+++++++.++...
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 457899999999999999999999999999999987632 346789999999999999999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCC----CeEEec
Q 002061 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY----EPKIAD 822 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~----~~kl~D 822 (973)
|+||||+++|+|.+++.. ...+++..+..++.||+.||+||| +.+|+||||||+||+++.++ .+||+|
T Consensus 91 ~lv~e~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~D 162 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLID 162 (361)
T ss_dssp EEEEECCCSCBHHHHHTT-----CSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred EEEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEe
Confidence 999999999999999964 245899999999999999999999 78999999999999998877 799999
Q ss_pred ccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccc
Q 002061 823 FGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH 902 (973)
Q Consensus 823 fgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 902 (973)
||++....... ......||+.|+|||++.+..++.++||||+||++|+|++|..||... +............
T Consensus 163 FG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~-----~~~~~~~~i~~~~ 234 (361)
T 2yab_A 163 FGLAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD-----TKQETLANITAVS 234 (361)
T ss_dssp CSSCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS-----SHHHHHHHHHTTC
T ss_pred cCCceEcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhcC
Confidence 99998765432 223457999999999999989999999999999999999999999653 1111222111111
Q ss_pred cccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 903 ENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
. .............+.+++.+|++.||.+|||+.|+++|-.
T Consensus 235 ~--------~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 275 (361)
T 2yab_A 235 Y--------DFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275 (361)
T ss_dssp C--------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTT
T ss_pred C--------CCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcC
Confidence 1 0011111223456789999999999999999999997643
No 67
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=3.1e-39 Score=354.53 Aligned_cols=264 Identities=36% Similarity=0.568 Sum_probs=213.8
Q ss_pred cCcccccCceEEEEEEecCCCcEEEEEeeecc------ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEEccC
Q 002061 681 DNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG------DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 681 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~------~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
.+.||+|+||+||+|+.. ++.||||++... ...+.+.+|++++++++||||+++++++..++..++||||++
T Consensus 36 ~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 113 (307)
T 2nru_A 36 GNKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMP 113 (307)
T ss_dssp CCEEEECSSEEEEEEESS--SCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred CCccccCCCeEEEEEEEC--CceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecC
Confidence 389999999999999874 789999988642 235678999999999999999999999999999999999999
Q ss_pred CCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccCCCC
Q 002061 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~ 834 (973)
+|+|.+++.... ....+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++........
T Consensus 114 ~~~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 188 (307)
T 2nru_A 114 NGSLLDRLSCLD--GTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188 (307)
T ss_dssp TCBHHHHHHTGG--GCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSS
T ss_pred CCcHHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEEcCCCcEEEeecccccccccccc
Confidence 999999997542 2346899999999999999999999 78999999999999999999999999999987654433
Q ss_pred cccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhcccccc
Q 002061 835 VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVA 914 (973)
Q Consensus 835 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (973)
........||+.|+|||++.+ .++.++||||||+++|+|++|+.||...... .....+..........+...++...
T Consensus 189 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~- 265 (307)
T 2nru_A 189 TVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLDIKEEIEDEEKTIEDYIDKKM- 265 (307)
T ss_dssp CEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSS-SBTTHHHHHHHTTSCCHHHHSCSSC-
T ss_pred cccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcch-HHHHHHHHHhhhhhhhhhhhccccc-
Confidence 333334578999999998865 5889999999999999999999999764322 2222222222222232334444333
Q ss_pred CcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002061 915 SESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 915 ~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
..........+.+++.+||+.||.+||++.+++++|+++.
T Consensus 266 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 266 NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 2334566778999999999999999999999999999865
No 68
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=358.06 Aligned_cols=262 Identities=21% Similarity=0.256 Sum_probs=206.1
Q ss_pred ccccccccccccCHHHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhc-CCCce
Q 002061 659 KWKLASFHHIDIDAEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKI-RHRNI 733 (973)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l-~hpni 733 (973)
.+....+++...+....++|++.++||+|+||+||+|++..+++.||||++... .....+.+|+..+.++ +||||
T Consensus 40 ~~~~~~~~p~~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~i 119 (311)
T 3p1a_A 40 TLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCC 119 (311)
T ss_dssp SCCCTTCCTTSSSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTB
T ss_pred ccCCCCCCCCCccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcE
Confidence 344455666666666778899999999999999999999989999999987552 2233445566665555 89999
Q ss_pred eeEEEEEEeCCeeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeec
Q 002061 734 LKLYACLLKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD 813 (973)
Q Consensus 734 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~ 813 (973)
+++++++.+++..|+||||+ +++|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++
T Consensus 120 v~l~~~~~~~~~~~lv~e~~-~~~L~~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~ 191 (311)
T 3p1a_A 120 VRLEQAWEEGGILYLQTELC-GPSLQQHCEAW----GASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLG 191 (311)
T ss_dssp CCEEEEEEETTEEEEEEECC-CCBHHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEC
T ss_pred EEEEEEEEeCCEEEEEEecc-CCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEC
Confidence 99999999999999999999 77999998764 345899999999999999999999 77999999999999999
Q ss_pred CCCCeEEecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHH
Q 002061 814 EDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVY 893 (973)
Q Consensus 814 ~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~ 893 (973)
.++.+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|||++|..|+.... .
T Consensus 192 ~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~----~--- 260 (311)
T 3p1a_A 192 PRGRCKLGDFGLLVELGTAG---AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE----G--- 260 (311)
T ss_dssp GGGCEEECCCTTCEECC---------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH----H---
T ss_pred CCCCEEEccceeeeecccCC---CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc----H---
Confidence 99999999999987664332 2233568999999999876 78999999999999999999977664321 1
Q ss_pred HHHHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 894 WVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
+ .. ... ..............+.+++.+|+++||++|||+.|++++-
T Consensus 261 ~-~~-~~~---------~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp 306 (311)
T 3p1a_A 261 W-QQ-LRQ---------GYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALP 306 (311)
T ss_dssp H-HH-HTT---------TCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred H-HH-Hhc---------cCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCc
Confidence 1 00 000 0011111223346788999999999999999999999864
No 69
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=373.50 Aligned_cols=262 Identities=25% Similarity=0.341 Sum_probs=209.7
Q ss_pred HHcCCcccCcccccCceEEEEEEe-----cCCCcEEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCe
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDL-----KKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGS 745 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~-----~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 745 (973)
...+|++.+.||+|+||+||+|++ ..+++.||||++... .....+.+|+.++++++||||+++++++..+..
T Consensus 69 ~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 148 (367)
T 3l9p_A 69 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 148 (367)
T ss_dssp CGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred CHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 346789999999999999999994 446778999998652 344568899999999999999999999999999
Q ss_pred eEEEEEccCCCchHHHHHhhhcC--CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCC---CeEE
Q 002061 746 SFLVLEYMPNGNLFQALHKRVKE--GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY---EPKI 820 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~--~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~---~~kl 820 (973)
.++||||+++|+|.+++...... ....+++..+..++.|+++||+||| +++|+||||||+||+++.++ .+||
T Consensus 149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEE
Confidence 99999999999999999875321 2245899999999999999999999 78999999999999999555 5999
Q ss_pred ecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHh
Q 002061 821 ADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHL 899 (973)
Q Consensus 821 ~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~ 899 (973)
+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |+.||... ........+.
T Consensus 226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~--~~~~~~~~i~--- 300 (367)
T 3l9p_A 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--SNQEVLEFVT--- 300 (367)
T ss_dssp CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHH---
T ss_pred CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHH---
Confidence 99999986543333333344568999999999999999999999999999999998 99999654 1111111111
Q ss_pred ccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002061 900 NNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
.... ..........+.+++.+||+.||++||++.||+++|+.+.
T Consensus 301 ~~~~-----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~ 344 (367)
T 3l9p_A 301 SGGR-----------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 344 (367)
T ss_dssp TTCC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCC-----------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 1110 0111123346889999999999999999999999998764
No 70
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.2e-38 Score=368.53 Aligned_cols=345 Identities=26% Similarity=0.347 Sum_probs=160.5
Q ss_pred CCccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCCCCcccCCCCCCEEeccCccCCCccccccccccccceEE
Q 002061 95 ALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLS 174 (973)
Q Consensus 95 ~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 174 (973)
.+++|+.|+++++.+. .+| .+..+++|++|+|++|.+++.++ ++++++|++|++++|.+++..+ +.++++|++|+
T Consensus 44 ~l~~l~~L~l~~~~i~-~l~-~~~~l~~L~~L~Ls~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HHHTCCEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred HhccccEEecCCCCCc-cCc-chhhhcCCCEEECCCCccCCchh-hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 3555666666666665 244 35566666666666666665554 6666666666666666654333 55555555555
Q ss_pred ccCCcCCCCCCcccccCCCCCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccccC
Q 002061 175 IGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLT 254 (973)
Q Consensus 175 l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 254 (973)
+++|.+.. ++. +.++++|++|++++|.+++ ++ .++.+++|++|+++ |.+.+.. .+.++++|++|++++|.++
T Consensus 119 L~~n~l~~--~~~-~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~ 190 (466)
T 1o6v_A 119 LFNNQITD--IDP-LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVS 190 (466)
T ss_dssp CCSSCCCC--CGG-GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCC
T ss_pred CCCCCCCC--ChH-HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCC
Confidence 55555442 222 4555555555555555553 22 24555555555553 3333221 1444555555555555544
Q ss_pred CcCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCCcccc
Q 002061 255 GELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLG 334 (973)
Q Consensus 255 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~ 334 (973)
+. ..+..+++|++|++++|.+.+..| ++.+++|+.|++++|++++. ..+..+++|+.|++++|.+++..+ +.
T Consensus 191 ~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~ 262 (466)
T 1o6v_A 191 DI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LS 262 (466)
T ss_dssp CC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GT
T ss_pred CC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hh
Confidence 22 124444555555555555443332 34444455555554444432 223444444444444444443222 34
Q ss_pred ccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCccccCCCCcceE
Q 002061 335 RYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGML 414 (973)
Q Consensus 335 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 414 (973)
.+++|+.|++++|++++. +. +..+++|++|+|++|++++..+ +..+++|+.|
T Consensus 263 ~l~~L~~L~l~~n~l~~~-------------------------~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L 314 (466)
T 1o6v_A 263 GLTKLTELKLGANQISNI-------------------------SP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYL 314 (466)
T ss_dssp TCTTCSEEECCSSCCCCC-------------------------GG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEE
T ss_pred cCCCCCEEECCCCccCcc-------------------------cc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEE
Confidence 444444444444444311 01 2333444444444444443222 3344444444
Q ss_pred eccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccc
Q 002061 415 DFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALT 494 (973)
Q Consensus 415 ~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 494 (973)
++++|++++..+ +..+++|+.|++++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|+++
T Consensus 315 ~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~ 388 (466)
T 1o6v_A 315 TLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWT 388 (466)
T ss_dssp ECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEE
T ss_pred ECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCccc
Confidence 444444443332 33344444444444444432 234444444444444444443333 444444444444444444
No 71
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2.6e-39 Score=373.20 Aligned_cols=369 Identities=18% Similarity=0.193 Sum_probs=284.9
Q ss_pred CcccCcCChhhhCCCCCcEEEecCCcccCCCCcccCCCCCCEEeccCccCCCccccccccccccceEEccCCcCCCCCCc
Q 002061 107 NVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIP 186 (973)
Q Consensus 107 n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip 186 (973)
....+..+..++++++|++|+|++|.+++.+ .++.+++|++|+|++|.+++. | +..+++|++|++++|.++.. |
T Consensus 28 ~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~--~ 101 (457)
T 3bz5_A 28 FEMQATDTISEEQLATLTSLDCHNSSITDMT-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL--D 101 (457)
T ss_dssp TTCCTTSEEEHHHHTTCCEEECCSSCCCCCT-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC--C
T ss_pred cCcCcccccChhHcCCCCEEEccCCCcccCh-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee--e
Confidence 3444555668999999999999999999874 799999999999999999874 3 88889999999999988753 3
Q ss_pred ccccCCCCCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccccCCcCCcccccccc
Q 002061 187 ESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTL 266 (973)
Q Consensus 187 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~ 266 (973)
++++++|++|++++|++++ +| ++.+++|++|++++|++++. + ++.+++|++|++++|+..+.+ .+..+++
T Consensus 102 --~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~ 171 (457)
T 3bz5_A 102 --VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQ 171 (457)
T ss_dssp --CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTT
T ss_pred --cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCc
Confidence 7888899999999999886 44 78888899999999988863 3 778888888888888655455 4777888
Q ss_pred ccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCCcccccccccccccccc
Q 002061 267 LQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISE 346 (973)
Q Consensus 267 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~ 346 (973)
|++|++++|++++ +| +..+++|+.|++++|++++. .++.+++|+.|++++|++++ +| ++.+++|+.|++++
T Consensus 172 L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~ 242 (457)
T 3bz5_A 172 LTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSV 242 (457)
T ss_dssp CCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCS
T ss_pred CCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeC
Confidence 8888888888875 44 77788888888888888764 37777888888888888876 44 67777777777777
Q ss_pred ccccccCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCC
Q 002061 347 NQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGIS 426 (973)
Q Consensus 347 N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 426 (973)
|++++. | +..+++|+.|++++|+ |+.|++++|.+.+..+
T Consensus 243 N~l~~~-------------------------~--~~~l~~L~~L~l~~n~--------------L~~L~l~~n~~~~~~~ 281 (457)
T 3bz5_A 243 NPLTEL-------------------------D--VSTLSKLTTLHCIQTD--------------LLEIDLTHNTQLIYFQ 281 (457)
T ss_dssp SCCSCC-------------------------C--CTTCTTCCEEECTTCC--------------CSCCCCTTCTTCCEEE
T ss_pred CcCCCc-------------------------C--HHHCCCCCEEeccCCC--------------CCEEECCCCccCCccc
Confidence 777632 1 2345667777776654 3456777777665544
Q ss_pred CCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCcccccccc
Q 002061 427 PLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCAR 506 (973)
Q Consensus 427 ~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 506 (973)
++.+++|+.|+|++|.+.+.+|. ..++|+.|++++| ++|++|+|++|+|++. + ++.+++
T Consensus 282 --~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~ 340 (457)
T 3bz5_A 282 --AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTK 340 (457)
T ss_dssp --CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTT
T ss_pred --ccccccCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCCccccc-c--cccCCc
Confidence 35667788888887776666553 3345555555554 6899999999999985 3 899999
Q ss_pred ccchhccccccccCCCccccccCCCCeeecCCCccCCCCChhhhcc-cCceEEccCCccccccCcccccC
Q 002061 507 IVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL-KLSSIDLSENQLSGSVPLDFLRM 575 (973)
Q Consensus 507 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l-~L~~l~ls~N~l~~~~p~~~~~~ 575 (973)
|+.|++++|+|++ ++.|..|++++|.++|. + .+ .+..+++++|+++|.+|..+...
T Consensus 341 L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-~----~~~~l~~l~l~~N~l~g~ip~~~~~~ 397 (457)
T 3bz5_A 341 LKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-G----QTITMPKETLTNNSLTIAVSPDLLDQ 397 (457)
T ss_dssp CSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-E----EEEECCCBCCBTTBEEEECCTTCBCT
T ss_pred CcEEECCCCCCCC--------ccccccccccCCcEEec-c----eeeecCccccccCcEEEEcChhHhcc
Confidence 9999999999985 35778889999999976 2 23 38889999999999999865443
No 72
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=9.2e-40 Score=365.03 Aligned_cols=255 Identities=21% Similarity=0.210 Sum_probs=207.3
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-------ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-------DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-------~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
.++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|+++++.++||||+++++++.+++..|
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 45789999999999999999999999999999998642 14677899999999999999999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCC---eEEeccc
Q 002061 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE---PKIADFG 824 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~---~kl~Dfg 824 (973)
+||||+++|+|.+++..... ....+++..+..++.|+++||+||| +++|+||||||+||+++.++. +||+|||
T Consensus 103 lv~e~~~g~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg 178 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRAD-AGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFG 178 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred EEEeCCCCCCHHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCc
Confidence 99999999999998876432 2345789999999999999999999 789999999999999987654 9999999
Q ss_pred CcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccc
Q 002061 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
++........ ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.... . ............
T Consensus 179 ~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~---~---~~~~~i~~~~~~ 250 (351)
T 3c0i_A 179 VAIQLGESGL--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK---E---RLFEGIIKGKYK 250 (351)
T ss_dssp TCEECCTTSC--BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH---H---HHHHHHHHTCCC
T ss_pred ceeEecCCCe--eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH---H---HHHHHHHcCCCC
Confidence 9987654322 1233579999999999999999999999999999999999999997531 1 111111111100
Q ss_pred cchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
............+.+++.+||+.||++|||+.|+++|
T Consensus 251 --------~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 251 --------MNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp --------CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --------CCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0001112234568899999999999999999999875
No 73
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.9e-40 Score=367.18 Aligned_cols=256 Identities=24% Similarity=0.328 Sum_probs=202.2
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcE----EEEEeeec---cccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGT----VAVKQLWK---GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~----vavK~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
..+|++.+.||+|+||+||+|++..+++. ||+|.+.. ....+.+.+|++++++++||||+++++++..+. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 35789999999999999999998776665 57777654 245577899999999999999999999998764 78
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcc
Q 002061 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+|+||+++|+|.+++... ...+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++
T Consensus 93 ~v~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 165 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEECCTTCBHHHHHHHS----TTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred EEEEecCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCccee
Confidence 899999999999999764 345899999999999999999999 7899999999999999999999999999998
Q ss_pred cccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccccc
Q 002061 828 IAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||... ........+.....
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~--~~~~~~~~~~~~~~------ 237 (327)
T 3poz_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGER------ 237 (327)
T ss_dssp HHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CGGGHHHHHHTTCC------
T ss_pred EccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCC--CHHHHHHHHHcCCC------
Confidence 7765544333444567889999999999999999999999999999999 99999754 22222222221110
Q ss_pred hhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002061 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
..........+.+++.+||+.||++||++.|++++|+.+.
T Consensus 238 --------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~ 277 (327)
T 3poz_A 238 --------LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp --------CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred --------CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 0111223446888999999999999999999999998754
No 74
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.5e-39 Score=355.37 Aligned_cols=265 Identities=15% Similarity=0.133 Sum_probs=214.6
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeeEEEEEcc
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.++|++.+.||+|+||+||+|++..+++.||||++......+.+.+|+++++++ +|++++++++++..+...++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 88 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL 88 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec
Confidence 357899999999999999999999889999999987766667789999999999 8999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCC-----eEEecccCccc
Q 002061 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE-----PKIADFGVAKI 828 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~-----~kl~Dfgl~~~ 828 (973)
+++|.+++... ...+++..+..++.|++.||+||| +++|+||||||+||+++.++. +||+|||+++.
T Consensus 89 -~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~ 160 (298)
T 1csn_A 89 -GPSLEDLLDLC----GRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 160 (298)
T ss_dssp -CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred -CCCHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence 99999999864 235899999999999999999999 889999999999999987776 99999999987
Q ss_pred ccCCCCc-----ccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhcccc
Q 002061 829 AENSPKV-----SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE 903 (973)
Q Consensus 829 ~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 903 (973)
....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..............
T Consensus 161 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~~~~~~~~~~~~~~ 238 (298)
T 1csn_A 161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA--TNKQKYERIGEKKQ 238 (298)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSC--CHHHHHHHHHHHHH
T ss_pred cccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcc--ccHHHHHHHHhhcc
Confidence 6543221 1223457999999999999999999999999999999999999999764221 11111111110000
Q ss_pred ccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCC
Q 002061 904 NVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPC 956 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 956 (973)
.. ............+.+++.+||+.||++||++.+|++.|+++...
T Consensus 239 ~~-------~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~ 284 (298)
T 1csn_A 239 ST-------PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 284 (298)
T ss_dssp HS-------CHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred Cc-------cHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence 00 00000112345688999999999999999999999999987543
No 75
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.5e-40 Score=371.88 Aligned_cols=262 Identities=28% Similarity=0.366 Sum_probs=209.1
Q ss_pred HcCCcccCcccccCceEEEEEE-----ecCCCcEEEEEeeeccc---cHHHHHHHHHHHHhc-CCCceeeEEEEEEeCC-
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLD-----LKKNAGTVAVKQLWKGD---GVKVFAAEMEILGKI-RHRNILKLYACLLKGG- 744 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~-----~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~- 744 (973)
.++|++.+.||+|+||.||+|+ ...+++.||||++.... ..+.+.+|+++++++ +||||+++++++.+++
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 100 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 100 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCC
Confidence 4678999999999999999999 45567899999987632 345688999999999 7999999999998755
Q ss_pred eeEEEEEccCCCchHHHHHhhhcCC-------------------------------------------------------
Q 002061 745 SSFLVLEYMPNGNLFQALHKRVKEG------------------------------------------------------- 769 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~------------------------------------------------------- 769 (973)
..++||||+++|+|.+++.......
T Consensus 101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (359)
T 3vhe_A 101 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 180 (359)
T ss_dssp CCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------------
T ss_pred ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcc
Confidence 4899999999999999998642110
Q ss_pred ------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccCCCCcccccccCC
Q 002061 770 ------KPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAG 843 (973)
Q Consensus 770 ------~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~g 843 (973)
...+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++...............|
T Consensus 181 ~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 257 (359)
T 3vhe_A 181 APEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257 (359)
T ss_dssp ---CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEE
T ss_pred cccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCC
Confidence 112889999999999999999999 78999999999999999999999999999986654443334445668
Q ss_pred ccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccccchhccccccCcchHHHH
Q 002061 844 THGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDM 922 (973)
Q Consensus 844 t~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (973)
|+.|+|||++.+..++.++|||||||++|||++ |+.||...... ......+.... .. ..+....
T Consensus 258 t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~--~~------------~~~~~~~ 322 (359)
T 3vhe_A 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLKEGT--RM------------RAPDYTT 322 (359)
T ss_dssp CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-HHHHHHHHHTC--CC------------CCCTTCC
T ss_pred CceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchh-HHHHHHHHcCC--CC------------CCCCCCC
Confidence 899999999999999999999999999999998 99999754221 11111111110 00 0111123
Q ss_pred HHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002061 923 IKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 923 ~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
..+.+++.+||+.||++|||+.|++++|+++.
T Consensus 323 ~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 323 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 46888999999999999999999999998764
No 76
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.1e-39 Score=350.61 Aligned_cols=258 Identities=25% Similarity=0.336 Sum_probs=210.3
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEEcc
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.++|++.+.||+|+||+||+|++.. +..||||++... ...+.+.+|++++++++||||+++++++..+...++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKG-QYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETT-TEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecC-ceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 3578999999999999999998875 678999998763 35677899999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccCCC
Q 002061 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++++|.+++... ...+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||++.......
T Consensus 86 ~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 158 (268)
T 3sxs_A 86 SNGCLLNYLRSH----GKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ 158 (268)
T ss_dssp TTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC
T ss_pred CCCcHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhh
Confidence 999999999764 235889999999999999999999 7899999999999999999999999999998665432
Q ss_pred CcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccccchhcccc
Q 002061 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
. .......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||.... ............. ...+
T Consensus 159 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~~~~~~~~~~~~----~~~~- 227 (268)
T 3sxs_A 159 Y-VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT-----NSEVVLKVSQGHR----LYRP- 227 (268)
T ss_dssp E-EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSC-----HHHHHHHHHTTCC----CCCC-
T ss_pred h-hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccC-----hHHHHHHHHcCCC----CCCC-
Confidence 2 22233456778999999998899999999999999999999 999996531 1111111111110 0001
Q ss_pred ccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCC
Q 002061 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCT 957 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 957 (973)
......+.+++.+||+.||++|||+.|++++|+.+....
T Consensus 228 ------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 228 ------HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp ------TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred ------CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 112346888999999999999999999999999987543
No 77
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=9.8e-40 Score=363.70 Aligned_cols=251 Identities=29% Similarity=0.369 Sum_probs=202.8
Q ss_pred HHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-----ccHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCee
Q 002061 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSS 746 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 746 (973)
..+++|++.+.||+|+||+||+|++..+++.||||++.+. ...+.+.+|..+++.+ +||||+++++++..++..
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 4467899999999999999999999999999999998753 3456678899999988 799999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCc
Q 002061 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
|+||||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||++
T Consensus 100 ~lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a 171 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQKS-----RRFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMC 171 (353)
T ss_dssp EEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccce
Confidence 9999999999999999764 35899999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccc
Q 002061 827 KIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
+...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||... +...............
T Consensus 172 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~-----~~~~~~~~i~~~~~~~- 243 (353)
T 3txo_A 172 KEGICNG--VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE-----NEDDLFEAILNDEVVY- 243 (353)
T ss_dssp BCSCC-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCC-
T ss_pred eecccCC--ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCC-----CHHHHHHHHHcCCCCC-
Confidence 7543221 2233457999999999999989999999999999999999999999653 1222222222111111
Q ss_pred hhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCH------HHHHHHh
Q 002061 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPM------REVVKML 950 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~------~evl~~L 950 (973)
+......+.+++.+|++.||.+||++ .|+++|-
T Consensus 244 -----------p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp 282 (353)
T 3txo_A 244 -----------PTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHP 282 (353)
T ss_dssp -----------CTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSG
T ss_pred -----------CCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCC
Confidence 11123457889999999999999998 7887753
No 78
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.4e-40 Score=353.11 Aligned_cols=254 Identities=26% Similarity=0.371 Sum_probs=208.7
Q ss_pred cCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEEccC
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
++|++.+.||+|+||+||+|++.. ++.||||++... ...+++.+|++++++++||||+++++++.++...++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETT-TEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecC-CCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 578899999999999999999875 778999998763 356778999999999999999999999999999999999999
Q ss_pred CCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccCCCC
Q 002061 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~ 834 (973)
+|+|.+++... ...+++..+..++.|+++|++||| +.+++||||||+||+++.++.+||+|||++........
T Consensus 89 ~~~L~~~l~~~----~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 161 (269)
T 4hcu_A 89 HGCLSDYLRTQ----RGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 161 (269)
T ss_dssp TCBHHHHHHTT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred CCcHHHHHHhc----CcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEecccccccccccccc
Confidence 99999999753 345899999999999999999999 78999999999999999999999999999976543211
Q ss_pred cccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccccchhccccc
Q 002061 835 VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 835 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
.......+|+.|+|||++.+..++.++||||+|+++|+|++ |+.||... .............. .
T Consensus 162 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~-----~~~~~~~~~~~~~~----~----- 226 (269)
T 4hcu_A 162 -TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR-----SNSEVVEDISTGFR----L----- 226 (269)
T ss_dssp -HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-----CHHHHHHHHHTTCC----C-----
T ss_pred -ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCC-----CHHHHHHHHhcCcc----C-----
Confidence 12223456788999999998999999999999999999999 99999653 11122221111110 0
Q ss_pred cCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002061 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
..+......+.+++.+||+.||++||++.|++++|+++.
T Consensus 227 --~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~ 265 (269)
T 4hcu_A 227 --YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 265 (269)
T ss_dssp --CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHH
Confidence 011112345888999999999999999999999998764
No 79
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=370.43 Aligned_cols=255 Identities=21% Similarity=0.265 Sum_probs=207.0
Q ss_pred HHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEE
Q 002061 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
...++|++.+.||+|+||+||+|.+..+++.||+|++... ...+.+.+|++++++++||||+++++++.+++..|+
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 3456899999999999999999999999999999998763 244568899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeec---CCCCeEEecccC
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD---EDYEPKIADFGV 825 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~---~~~~~kl~Dfgl 825 (973)
||||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++ .++.+||+|||+
T Consensus 88 v~E~~~gg~L~~~i~~~-----~~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~ 159 (444)
T 3soa_A 88 IFDLVTGGELFEDIVAR-----EYYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGL 159 (444)
T ss_dssp EECCCBCCBHHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSS
T ss_pred EEEeCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCce
Confidence 99999999999999753 35899999999999999999999 78999999999999998 467899999999
Q ss_pred cccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhcccccc
Q 002061 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
+........ ......||+.|+|||++.+..++.++||||+||++|+|++|+.||... +.. ............
T Consensus 160 a~~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~--~~~---~~~~~i~~~~~~- 231 (444)
T 3soa_A 160 AIEVEGEQQ--AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDE--DQH---RLYQQIKAGAYD- 231 (444)
T ss_dssp CBCCCTTCC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCS--SHH---HHHHHHHHTCCC-
T ss_pred eEEecCCCc--eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCc--cHH---HHHHHHHhCCCC-
Confidence 976654322 223457999999999999989999999999999999999999999653 111 111111111110
Q ss_pred chhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
............+.+++.+|++.||.+|||+.|+++|-
T Consensus 232 -------~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp 269 (444)
T 3soa_A 232 -------FPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHP 269 (444)
T ss_dssp -------CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSC
T ss_pred -------CCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCc
Confidence 00111122345688999999999999999999999874
No 80
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.6e-39 Score=364.14 Aligned_cols=254 Identities=23% Similarity=0.346 Sum_probs=204.8
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-----ccHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeeEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l 748 (973)
..+|++.+.||+|+||+||+|+++.+++.||||++.+. ...+.+.+|..+++++ +||||+++++++.+++..|+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 56899999999999999999999999999999998763 2334578899999887 89999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccc
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++... ..+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++.
T Consensus 131 V~E~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~ 202 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 202 (396)
T ss_dssp EEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEcCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeee
Confidence 99999999999999864 35899999999999999999999 78999999999999999999999999999975
Q ss_pred ccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCc----ccHHHHHHHHhccccc
Q 002061 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDG----KDIVYWVSTHLNNHEN 904 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~----~~~~~~~~~~~~~~~~ 904 (973)
..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ................
T Consensus 203 ~~~~~--~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~ 280 (396)
T 4dc2_A 203 GLRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 280 (396)
T ss_dssp CCCTT--CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCC
T ss_pred cccCC--CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccC
Confidence 32221 22334679999999999999999999999999999999999999996432111 1111111111111111
Q ss_pred cchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCH------HHHHHHh
Q 002061 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPM------REVVKML 950 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~------~evl~~L 950 (973)
.+......+.+++.+||+.||.+||++ .|+++|-
T Consensus 281 ------------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hp 320 (396)
T 4dc2_A 281 ------------IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP 320 (396)
T ss_dssp ------------CCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHST
T ss_pred ------------CCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCc
Confidence 111234467889999999999999985 6777653
No 81
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.5e-39 Score=360.70 Aligned_cols=260 Identities=17% Similarity=0.145 Sum_probs=211.0
Q ss_pred cCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeeEEEEEccC
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
.+|++.+.||+|+||+||+|++..+++.||||++......+.+.+|+++++++ +||||+++++++..++..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~- 87 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL- 87 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-
Confidence 57899999999999999999999999999999988766666789999999999 9999999999999999999999999
Q ss_pred CCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCC-----eEEecccCcccc
Q 002061 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE-----PKIADFGVAKIA 829 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~-----~kl~Dfgl~~~~ 829 (973)
+++|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||+++..
T Consensus 88 ~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~ 160 (330)
T 2izr_A 88 GPSLEDLFDLC----DRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160 (330)
T ss_dssp CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred CCCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence 99999999853 346899999999999999999999 789999999999999998887 999999999876
Q ss_pred cCCCCcc-----cccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccc
Q 002061 830 ENSPKVS-----DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 830 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+..............
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~--~~~~~~~~~~i~~~~~~ 238 (330)
T 2izr_A 161 IDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLK--ADTLKERYQKIGDTKRA 238 (330)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC--CSSHHHHHHHHHHHHHH
T ss_pred ecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccc--cccHHHHHHHHHhhhcc
Confidence 4432211 1234679999999999999999999999999999999999999997652 22222222111110000
Q ss_pred cchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002061 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
.. .... ....+ .+.+++..|++.||.+||++.+|.+.|+++
T Consensus 239 ~~---~~~~----~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~ 279 (330)
T 2izr_A 239 TP---IEVL----CENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDL 279 (330)
T ss_dssp SC---HHHH----TTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred CC---HHHH----hccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 00 0000 00112 788999999999999999999999999754
No 82
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.1e-40 Score=363.88 Aligned_cols=263 Identities=28% Similarity=0.377 Sum_probs=204.7
Q ss_pred HcCCcccCcccccCceEEEEEE----ecCCCcEEEEEeeecc--ccHHHHHHHHHHHHhcCCCceeeEEEEEEe--CCee
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLD----LKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLK--GGSS 746 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~----~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~ 746 (973)
..+|++.+.||+|+||+||+|+ ...+++.||||++... ...+.+.+|++++++++||||+++++++.. ....
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 4578999999999999999998 4567899999998753 334678899999999999999999999865 3568
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCc
Q 002061 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
++||||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 89 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~ 161 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLT 161 (295)
T ss_dssp EEEEECCTTCBHHHHHHHC----GGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSC
T ss_pred EEEEEeCCCCCHHHHHHhc----ccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCccc
Confidence 9999999999999999764 235899999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCc-ccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCC----------cccHHHHH
Q 002061 827 KIAENSPKV-SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGD----------GKDIVYWV 895 (973)
Q Consensus 827 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~----------~~~~~~~~ 895 (973)
+........ .......++..|+|||++.+..++.++||||||+++|||++|..||.....+ ........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (295)
T 3ugc_A 162 KVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 241 (295)
T ss_dssp C-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHH
T ss_pred ccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHH
Confidence 876543221 1222345778899999999999999999999999999999999998653110 00000011
Q ss_pred HHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002061 896 STHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
...... ......+......+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 242 ~~~~~~----------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~ 290 (295)
T 3ugc_A 242 IELLKN----------NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 290 (295)
T ss_dssp HHHHHT----------TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhc----------cCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 111111 1111112233457889999999999999999999999998764
No 83
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=5e-39 Score=353.03 Aligned_cols=246 Identities=26% Similarity=0.343 Sum_probs=206.8
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
.++|++.+.||+|+||+||+|+...+++.||||++.+. ...+.+.+|+.+++.++||||+++++++.+....|+|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 46789999999999999999999999999999998753 3456788999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccc
Q 002061 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 85 ~e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~ 156 (318)
T 1fot_A 85 MDYIEGGELFSLLRKS-----QRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYV 156 (318)
T ss_dssp ECCCCSCBHHHHHHHT-----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEEC
T ss_pred EeCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceec
Confidence 9999999999999753 35889999999999999999999 889999999999999999999999999999865
Q ss_pred cCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhc
Q 002061 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
... .....||+.|+|||++.+..++.++||||+||++|||++|+.||... +..............
T Consensus 157 ~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~-----~~~~~~~~i~~~~~~----- 221 (318)
T 1fot_A 157 PDV-----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS-----NTMKTYEKILNAELR----- 221 (318)
T ss_dssp SSC-----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHHCCCC-----
T ss_pred CCc-----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCCC-----
Confidence 432 22357899999999999999999999999999999999999999653 112222222111110
Q ss_pred cccccCcchHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHh
Q 002061 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRP-----PMREVVKML 950 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~L 950 (973)
. +......+.+++.+|++.||.+|| ++.|+++|-
T Consensus 222 ---~----p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp 260 (318)
T 1fot_A 222 ---F----PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHP 260 (318)
T ss_dssp ---C----CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSG
T ss_pred ---C----CCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCc
Confidence 0 112234678899999999999999 899999763
No 84
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.7e-39 Score=357.50 Aligned_cols=253 Identities=23% Similarity=0.276 Sum_probs=207.9
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc--------cHHHHHHHHHHHHhcCCCceeeEEEEEEeCCee
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD--------GVKVFAAEMEILGKIRHRNILKLYACLLKGGSS 746 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 746 (973)
.++|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++..+...
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 456899999999999999999999999999999986531 356789999999999999999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCC----CeEEec
Q 002061 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY----EPKIAD 822 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~----~~kl~D 822 (973)
++||||+++|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|
T Consensus 90 ~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~D 161 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAE-----KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIID 161 (326)
T ss_dssp EEEEECCCSCBHHHHHTT-----SSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECC
T ss_pred EEEEEcCCCCCHHHHHHh-----cCCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEE
Confidence 999999999999999864 245899999999999999999999 78999999999999999887 799999
Q ss_pred ccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccc
Q 002061 823 FGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH 902 (973)
Q Consensus 823 fgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 902 (973)
||+++...... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.... ............
T Consensus 162 fg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~~~~~~ 233 (326)
T 2y0a_A 162 FGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-----KQETLANVSAVN 233 (326)
T ss_dssp CTTCEECCTTS---CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-----HHHHHHHHHHTC
T ss_pred CCCCeECCCCC---ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC-----HHHHHHHHHhcC
Confidence 99998765332 2233568999999999998999999999999999999999999996531 111111111111
Q ss_pred cccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 903 ENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
. .............+.+++.+|++.||++|||+.|+++|-.
T Consensus 234 ~--------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 274 (326)
T 2y0a_A 234 Y--------EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274 (326)
T ss_dssp C--------CCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTT
T ss_pred C--------CcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 0 0111111223456789999999999999999999998643
No 85
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3.4e-39 Score=362.09 Aligned_cols=251 Identities=24% Similarity=0.317 Sum_probs=206.8
Q ss_pred HHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEE
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
..++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|+++++.++||||+++++++.+.+..|+
T Consensus 13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 92 (384)
T 4fr4_A 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFM 92 (384)
T ss_dssp CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 356899999999999999999999999999999998652 345678899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccc
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++..
T Consensus 93 v~e~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~ 164 (384)
T 4fr4_A 93 VVDLLLGGDLRYHLQQN-----VHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAM 164 (384)
T ss_dssp EECCCTTEEHHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeee
Confidence 99999999999999753 35899999999999999999999 78999999999999999999999999999987
Q ss_pred ccCCCCcccccccCCcccccccccccc---CCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhcccccc
Q 002061 829 AENSPKVSDYSCFAGTHGYIAPELAYT---CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ................
T Consensus 165 ~~~~~---~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~--~~~~~~~~~~~~~~~~- 238 (384)
T 4fr4_A 165 LPRET---QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS--TSSKEIVHTFETTVVT- 238 (384)
T ss_dssp CCTTC---CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTT--SCHHHHHHHHHHCCCC-
T ss_pred ccCCC---ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCC--ccHHHHHHHHhhcccC-
Confidence 65432 2334679999999999864 4589999999999999999999999975422 2222222222111111
Q ss_pred chhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCC-HHHHHHH
Q 002061 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPP-MREVVKM 949 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-~~evl~~ 949 (973)
.+......+.+++.+||+.||.+||+ +.++.++
T Consensus 239 -----------~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~h 272 (384)
T 4fr4_A 239 -----------YPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNF 272 (384)
T ss_dssp -----------CCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred -----------CCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcC
Confidence 11123456889999999999999998 7777653
No 86
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3.9e-39 Score=355.00 Aligned_cols=274 Identities=20% Similarity=0.283 Sum_probs=196.0
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
..+|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 46789999999999999999999999999999998653 234678899999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcC-CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccccc
Q 002061 752 YMPNGNLFQALHKRVKE-GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~-~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
|++ |+|.+++...... ....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 997 6999999765322 2235889999999999999999999 7899999999999999999999999999998664
Q ss_pred CCCCcccccccCCcccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhcccc-cc-ch
Q 002061 831 NSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE-NV-LK 907 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~-~~-~~ 907 (973)
.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.... .......+........ .. ..
T Consensus 160 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~ 235 (317)
T 2pmi_A 160 IPVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN--DEEQLKLIFDIMGTPNESLWPS 235 (317)
T ss_dssp SCCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCSCCTTTCGG
T ss_pred CCcc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHhCCCChhHhhh
Confidence 3322 2233568999999999876 468999999999999999999999997541 1111111111111000 00 00
Q ss_pred h-----ccccc------------cCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH--hhcCCCC
Q 002061 908 V-----LDCEV------------ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM--LADADPC 956 (973)
Q Consensus 908 ~-----~~~~~------------~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~--L~~~~~~ 956 (973)
. ..+.. ...........+.+++.+|++.||++|||+.|++++ +.+....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 303 (317)
T 2pmi_A 236 VTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHH 303 (317)
T ss_dssp GGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC-
T ss_pred hhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccch
Confidence 0 00000 000001223568899999999999999999999986 4444333
No 87
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-39 Score=360.43 Aligned_cols=250 Identities=26% Similarity=0.339 Sum_probs=206.2
Q ss_pred HHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeE
Q 002061 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
..+++|++.+.||+|+||+||+|++..+++.||||++... .....+.+|+++++.++||||+++++++..++..+
T Consensus 6 ~~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 85 (336)
T 3h4j_B 6 RHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIV 85 (336)
T ss_dssp SEETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence 3457899999999999999999999999999999998652 23457889999999999999999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcc
Q 002061 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+||||+ +|+|.+++... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++.
T Consensus 86 lv~E~~-~g~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~ 156 (336)
T 3h4j_B 86 MVIEYA-GGELFDYIVEK-----KRMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSN 156 (336)
T ss_dssp EEECCC-CEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTB
T ss_pred EEEECC-CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccce
Confidence 999999 78999998754 35889999999999999999999 7799999999999999999999999999998
Q ss_pred cccCCCCcccccccCCccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccc
Q 002061 828 IAENSPKVSDYSCFAGTHGYIAPELAYTCKV-SEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
...... ......||+.|+|||++.+..+ ++++||||+||++|+|++|+.||........ ..
T Consensus 157 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~---------------~~ 218 (336)
T 3h4j_B 157 IMTDGN---FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL---------------FK 218 (336)
T ss_dssp TTTTSB---TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC---------------BC
T ss_pred eccCCc---ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH---------------HH
Confidence 664432 2233568999999999988776 6899999999999999999999975421100 00
Q ss_pred hhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.+..... ..+......+.+++.+|++.||.+|||+.|++++-.
T Consensus 219 ~i~~~~~--~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~ 261 (336)
T 3h4j_B 219 KVNSCVY--VMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPW 261 (336)
T ss_dssp CCCSSCC--CCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHH
T ss_pred HHHcCCC--CCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChh
Confidence 0100100 111123456788999999999999999999998754
No 88
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=7.1e-40 Score=365.75 Aligned_cols=264 Identities=27% Similarity=0.359 Sum_probs=211.3
Q ss_pred HcCCcccCcccccCceEEEEEEec-----CCCcEEEEEeeeccc---cHHHHHHHHHHHHhcCCCceeeEEEEEEeCCee
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLK-----KNAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSS 746 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~-----~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 746 (973)
.++|++.+.||+|+||+||+|++. .+++.||||++.... ..+.+.+|++++++++||||+++++++..++..
T Consensus 46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 125 (343)
T 1luf_A 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM 125 (343)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCce
Confidence 467899999999999999999997 345899999987632 346788999999999999999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcC-------------------CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCC
Q 002061 747 FLVLEYMPNGNLFQALHKRVKE-------------------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKS 807 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~-------------------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp 807 (973)
|+||||+++|+|.+++...... ....+++..+..++.|+++||+||| +++|+||||||
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp 202 (343)
T 1luf_A 126 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLAT 202 (343)
T ss_dssp EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred EEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCc
Confidence 9999999999999999864211 1256899999999999999999999 78999999999
Q ss_pred CCeeecCCCCeEEecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccC
Q 002061 808 SNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYG 886 (973)
Q Consensus 808 ~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~ 886 (973)
+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus 203 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~- 281 (343)
T 1luf_A 203 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA- 281 (343)
T ss_dssp GGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-
T ss_pred ceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC-
Confidence 999999999999999999986644332223334567899999999998899999999999999999999 999996531
Q ss_pred CcccHHHHHHHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCC
Q 002061 887 DGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCT 957 (973)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 957 (973)
............. . ..+......+.+++.+||+.||++||++.+++++|+++....
T Consensus 282 ----~~~~~~~~~~~~~--~---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 282 ----HEEVIYYVRDGNI--L---------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp ----HHHHHHHHHTTCC--C---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred ----hHHHHHHHhCCCc--C---------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 1111111111110 0 011123456889999999999999999999999999987644
No 89
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=5.1e-40 Score=369.72 Aligned_cols=257 Identities=28% Similarity=0.437 Sum_probs=197.5
Q ss_pred HcCCcccCcccccCceEEEEEEec---CCCcEEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLK---KNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~---~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
..+|++.+.||+|+||+||+|++. .++..||||++... ...+.+.+|++++++++||||+++++++..++..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 457899999999999999999987 45778999998753 345678999999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccc
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.++++.. ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 124 v~e~~~~~sL~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKH----DAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp EEECCTTCBHHHHHHTT----TTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEeCCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 99999999999999753 346899999999999999999999 78999999999999999999999999999987
Q ss_pred ccCCCCc-ccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccccc
Q 002061 829 AENSPKV-SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 829 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
....... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||... ........+.. ...
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~--~~~~~~~~i~~---~~~--- 268 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIKAVDE---GYR--- 268 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTC--CHHHHHHHHHT---TEE---
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHc---CCC---
Confidence 6543211 11122345778999999999999999999999999999998 99999653 11111111111 100
Q ss_pred hhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002061 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
..........+.+++.+||+.||++||++.||++.|+.+.
T Consensus 269 --------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~ 308 (373)
T 2qol_A 269 --------LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308 (373)
T ss_dssp --------CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --------CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHH
Confidence 0111123456889999999999999999999999998764
No 90
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2e-39 Score=355.24 Aligned_cols=261 Identities=28% Similarity=0.435 Sum_probs=201.9
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeec----cccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
..+|++.+.||+|+||+||+|++.. .+|||+++. ....+.+.+|++++++++||||+++++++. ++..++||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~---~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~ 110 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVT 110 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEECC---EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEE
Confidence 4689999999999999999998764 588887764 234567889999999999999999999765 45689999
Q ss_pred EccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccccc
Q 002061 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 111 e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~ 183 (307)
T 3lb7_A 111 QWCEGSSLYKHLHVQ----ETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp ECCSSCBHHHHHHTS----CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC--
T ss_pred ecCCCCcHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceecc
Confidence 999999999999743 446899999999999999999999 7899999999999999999999999999997654
Q ss_pred CCCCcccccccCCccccccccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccch
Q 002061 831 NSPKVSDYSCFAGTHGYIAPELAY---TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
............||+.|+|||++. +..++.++|||||||++|||++|+.||..... .......+... ...+...
T Consensus 184 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~-~~~~~~~~~~~-~~~~~~~- 260 (307)
T 3lb7_A 184 RWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN-RDQIIFMVGRG-YASPDLS- 260 (307)
T ss_dssp ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC-HHHHHHHHHHT-CCCCCST-
T ss_pred cccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCc-HHHHHHHHhcC-CCCcchh-
Confidence 333223334457999999999986 66788999999999999999999999975421 11111111111 1111000
Q ss_pred hccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCC
Q 002061 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCT 957 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 957 (973)
.........+.+++.+||+.||++||++.|++++|+.+....
T Consensus 261 --------~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 261 --------KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp --------TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred --------hhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 111123456889999999999999999999999999886554
No 91
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=3.3e-39 Score=351.48 Aligned_cols=265 Identities=22% Similarity=0.261 Sum_probs=203.3
Q ss_pred cCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEE
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
++|++.+.||+|+||+||+|++..+++.||||++... .....+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 5789999999999999999999999999999998652 234678899999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccC
Q 002061 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|+++ ++.+++... ...+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++....
T Consensus 82 ~~~~-~l~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 153 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSC----NGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp CCSE-EHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred cCCC-CHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence 9965 666666542 345899999999999999999999 78999999999999999999999999999986643
Q ss_pred CCCcccccccCCccccccccccccCC-CCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccc----cc
Q 002061 832 SPKVSDYSCFAGTHGYIAPELAYTCK-VSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN----VL 906 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~----~~ 906 (973)
.. .......||+.|+|||++.+.. ++.++||||+||++|||++|..||....................... ..
T Consensus 154 ~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 231 (292)
T 3o0g_A 154 PV--RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT 231 (292)
T ss_dssp CC--SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGG
T ss_pred cc--ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhc
Confidence 32 2233457899999999997765 79999999999999999999888643321111111111111000000 00
Q ss_pred hhcc---------ccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 907 KVLD---------CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 907 ~~~~---------~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
...+ ..............+.+++.+|++.||++|||+.|+++|-
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 284 (292)
T 3o0g_A 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHP 284 (292)
T ss_dssp GSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred ccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCc
Confidence 0000 0000011123345678999999999999999999999863
No 92
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=4.4e-39 Score=354.92 Aligned_cols=249 Identities=24% Similarity=0.346 Sum_probs=205.2
Q ss_pred CcccCcccccCceEEEEEEecCCCcEEEEEeeec--cccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEEccCC
Q 002061 678 LEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK--GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 678 ~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
|+..+.||+|+||.||+|++..+|+.||||++.. ....+.+.+|+.++++++||||+++++++..++..++||||+++
T Consensus 47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 126 (321)
T 2c30_A 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQG 126 (321)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCS
T ss_pred hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCC
Confidence 5666789999999999999998899999999865 34566788999999999999999999999999999999999999
Q ss_pred CchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccCCCCc
Q 002061 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
|+|.+++.. ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++........
T Consensus 127 ~~L~~~l~~------~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~- 196 (321)
T 2c30_A 127 GALTDIVSQ------VRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP- 196 (321)
T ss_dssp CBHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-
T ss_pred CCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCcc-
Confidence 999998863 25899999999999999999999 78999999999999999999999999999986654322
Q ss_pred ccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhccccccC
Q 002061 836 SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVAS 915 (973)
Q Consensus 836 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
......||+.|+|||++.+..++.++|||||||++|||++|+.||... +............. +..
T Consensus 197 -~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~-----~~~~~~~~~~~~~~-------~~~-- 261 (321)
T 2c30_A 197 -KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD-----SPVQAMKRLRDSPP-------PKL-- 261 (321)
T ss_dssp -CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-----CHHHHHHHHHHSSC-------CCC--
T ss_pred -ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHhcCCC-------CCc--
Confidence 223457999999999999999999999999999999999999999653 11111111111111 000
Q ss_pred cchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 916 ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 916 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.........+.+++.+||+.||++|||+.|++++-.
T Consensus 262 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~ 297 (321)
T 2c30_A 262 KNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPF 297 (321)
T ss_dssp TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred CccccCCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 011123346788999999999999999999998744
No 93
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.5e-39 Score=362.46 Aligned_cols=253 Identities=25% Similarity=0.309 Sum_probs=207.1
Q ss_pred HHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEE
Q 002061 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
...++|++.+.||+|+||.||+|.+..+++.||||++... ...+.+.+|++++++++||||+++++++.+++..|+
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 4456899999999999999999999999999999998753 244668899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCC---CCeEEecccC
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED---YEPKIADFGV 825 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~---~~~kl~Dfgl 825 (973)
||||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.+ +.+||+|||+
T Consensus 106 v~e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~ 177 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGL 177 (362)
T ss_dssp EECCCCSCBHHHHHTTC-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCc
Confidence 99999999999988642 35889999999999999999999 7899999999999999865 4599999999
Q ss_pred cccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhcccccc
Q 002061 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
+....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.... ..............
T Consensus 178 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~-----~~~~~~~i~~~~~~- 248 (362)
T 2bdw_A 178 AIEVNDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED-----QHRLYAQIKAGAYD- 248 (362)
T ss_dssp CBCCTTCC---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTCCC-
T ss_pred ceEecCCc---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhCCCC-
Confidence 98665332 2234579999999999999899999999999999999999999996531 11111111111100
Q ss_pred chhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
............+.+++.+||+.||++||++.|++++
T Consensus 249 -------~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 249 -------YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp -------CCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -------CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0011112234567899999999999999999999876
No 94
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=5.1e-38 Score=365.49 Aligned_cols=357 Identities=26% Similarity=0.363 Sum_probs=212.9
Q ss_pred CCcccCcCChhhhCCCCCcEEEecCCcccCCCCcccCCCCCCEEeccCccCCCccccccccccccceEEccCCcCCCCCC
Q 002061 106 FNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEI 185 (973)
Q Consensus 106 ~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~i 185 (973)
.+.+.+.++. ..+++|+.|+++++.+...+ .+..+++|++|||++|.+++..+ +.++++|++|++++|.+.. +
T Consensus 33 ~~~~~~~i~~--~~l~~l~~L~l~~~~i~~l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~--~ 105 (466)
T 1o6v_A 33 KTNVTDTVSQ--TDLDQVTTLQADRLGIKSID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD--I 105 (466)
T ss_dssp CSSTTSEECH--HHHHTCCEEECCSSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC--C
T ss_pred ccccccccCh--hHhccccEEecCCCCCccCc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCcccc--C
Confidence 3444444442 45678889999988887643 57888888888888888875543 6666777777776666653 3
Q ss_pred cccccCCCCCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccccCCcCCccccccc
Q 002061 186 PESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLT 265 (973)
Q Consensus 186 p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~ 265 (973)
+. ++++++|++|++++|++++..+ +..+++|++|++++|++++ ++ .+..+++|++|+++ |.+.+.. .+.+++
T Consensus 106 ~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~ 177 (466)
T 1o6v_A 106 TP-LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLT 177 (466)
T ss_dssp GG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCT
T ss_pred hh-hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCC
Confidence 33 6666666666666666664322 5666666666666666653 22 35555555555554 3333221 245555
Q ss_pred cccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCCccccccccccccccc
Q 002061 266 LLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDIS 345 (973)
Q Consensus 266 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls 345 (973)
+|++|++++|.+++. ..+. .+++|+.|++++|.+++..| ++.+++|+.|+++
T Consensus 178 ~L~~L~l~~n~l~~~--~~l~------------------------~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~ 229 (466)
T 1o6v_A 178 TLERLDISSNKVSDI--SVLA------------------------KLTNLESLIATNNQISDITP--LGILTNLDELSLN 229 (466)
T ss_dssp TCCEEECCSSCCCCC--GGGG------------------------GCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECC
T ss_pred CCCEEECcCCcCCCC--hhhc------------------------cCCCCCEEEecCCccccccc--ccccCCCCEEECC
Confidence 555555555554421 1234 44444444444444443332 4445555555555
Q ss_pred cccccccCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCC
Q 002061 346 ENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGI 425 (973)
Q Consensus 346 ~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 425 (973)
+|++++. ..+..+++|++|++++|.+++..+ +..+++|+.|++++|++++..
T Consensus 230 ~n~l~~~--------------------------~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~ 281 (466)
T 1o6v_A 230 GNQLKDI--------------------------GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNIS 281 (466)
T ss_dssp SSCCCCC--------------------------GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCG
T ss_pred CCCcccc--------------------------hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCccc
Confidence 5555421 123445666666666666664433 555666666666666665544
Q ss_pred CCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccc
Q 002061 426 SPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCA 505 (973)
Q Consensus 426 ~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 505 (973)
+ +..+++|+.|+|++|++++..+ +..+++|+.|+|++|++++..| +..+++|++|++++|++++. ..+..++
T Consensus 282 ~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~ 353 (466)
T 1o6v_A 282 P--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLT 353 (466)
T ss_dssp G--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCT
T ss_pred c--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCC
Confidence 3 5566667777777777664433 6667777777777777765554 56677777777777777654 3566666
Q ss_pred cccchhccccccccCCCccccccCCCCeeecCCCccCC
Q 002061 506 RIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTG 543 (973)
Q Consensus 506 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 543 (973)
+|+.|++++|++++..| +..+++|+.|++++|++++
T Consensus 354 ~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 354 NINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp TCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred CCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 66777777776666555 6666677777777777664
No 95
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=9.5e-40 Score=359.86 Aligned_cols=261 Identities=26% Similarity=0.357 Sum_probs=212.2
Q ss_pred HcCCcccCcccccCceEEEEEEec-----CCCcEEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCee
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLK-----KNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSS 746 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~-----~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 746 (973)
..+|++.+.||+|+||+||+|++. .+++.||||++... ...+.+.+|++++++++||||+++++++..++..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 357889999999999999999983 34578999998753 3346788999999999999999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcC-------------------CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCC
Q 002061 747 FLVLEYMPNGNLFQALHKRVKE-------------------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKS 807 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~-------------------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp 807 (973)
++||||+++|+|.+++...... ....+++..+..++.|+++||+||| +++++||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccch
Confidence 9999999999999999864221 1234889999999999999999999 78999999999
Q ss_pred CCeeecCCCCeEEecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccC
Q 002061 808 SNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYG 886 (973)
Q Consensus 808 ~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~ 886 (973)
+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++||||+||++|||++ |+.||....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~- 257 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP- 257 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC-
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC-
Confidence 999999999999999999987655443333344567889999999999899999999999999999999 999997542
Q ss_pred CcccHHHHHHHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002061 887 DGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
.......+.... ...........+.+++.+||+.||++||++.|++++|+++.
T Consensus 258 -~~~~~~~~~~~~--------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 310 (314)
T 2ivs_A 258 -PERLFNLLKTGH--------------RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310 (314)
T ss_dssp -GGGHHHHHHTTC--------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -HHHHHHHhhcCC--------------cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 222222221110 00111223456889999999999999999999999998763
No 96
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=3.1e-40 Score=365.32 Aligned_cols=256 Identities=24% Similarity=0.337 Sum_probs=204.0
Q ss_pred cCCcccCcccccCceEEEEEEecCCCcE----EEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEE
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGT----VAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~~~~~~----vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
.+|++.+.||+|+||+||+|++..+++. ||+|++... .....+.+|+.++++++||||+++++++. +...++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 5788999999999999999999877766 777766442 23355778999999999999999999886 556899
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccc
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 92 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQH----RGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADL 164 (325)
T ss_dssp EEECCTTCBSHHHHHSS----GGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred EEEeCCCCCHHHHHHHc----cccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccc
Confidence 99999999999999753 235788899999999999999999 78999999999999999999999999999987
Q ss_pred ccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccccch
Q 002061 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
..............||..|+|||++.+..++.++|||||||++|||++ |+.||.... .......+......
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~~~~~~~~~~~~------ 236 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR--LAEVPDLLEKGERL------ 236 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC--TTHHHHHHHTTCBC------
T ss_pred cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccC--HHHHHHHHHcCCCC------
Confidence 765544444445678889999999999999999999999999999999 999997642 22222222111000
Q ss_pred hccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002061 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
. .+......+.+++.+||+.||.+||++.|++++|+.+..
T Consensus 237 -~-------~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 237 -A-------QPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp -C-------CCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred -C-------CCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0 001122346789999999999999999999999987653
No 97
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=367.63 Aligned_cols=262 Identities=27% Similarity=0.376 Sum_probs=213.1
Q ss_pred HcCCcccCcccccCceEEEEEEecC-------CCcEEEEEeeecc---ccHHHHHHHHHHHHhc-CCCceeeEEEEEEeC
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKK-------NAGTVAVKQLWKG---DGVKVFAAEMEILGKI-RHRNILKLYACLLKG 743 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~-------~~~~vavK~~~~~---~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~ 743 (973)
.++|++.+.||+|+||+||+|++.. .+..||||++... ...+.+.+|+++++++ +||||+++++++..+
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 3578899999999999999999753 3457999998763 3346688999999999 999999999999999
Q ss_pred CeeEEEEEccCCCchHHHHHhhhcC-----------CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeee
Q 002061 744 GSSFLVLEYMPNGNLFQALHKRVKE-----------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL 812 (973)
Q Consensus 744 ~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill 812 (973)
+..++||||+++|+|.+++...... ....+++..+..++.|++.||+||| +.+|+||||||+||++
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEEE
Confidence 9999999999999999999875311 1245899999999999999999999 7899999999999999
Q ss_pred cCCCCeEEecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccH
Q 002061 813 DEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDI 891 (973)
Q Consensus 813 ~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~ 891 (973)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |..||... ..
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~-----~~ 299 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-----PV 299 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-----CH
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-----CH
Confidence 9999999999999987755443333444567899999999999999999999999999999999 99999654 11
Q ss_pred HHHHHHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002061 892 VYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
............ ...+......+.+++.+||+.||++||++.|++++|+++..
T Consensus 300 ~~~~~~~~~~~~-----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 352 (382)
T 3tt0_A 300 EELFKLLKEGHR-----------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 352 (382)
T ss_dssp HHHHHHHHTTCC-----------CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCC-----------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 222221111111 00111234568899999999999999999999999998753
No 98
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=5.9e-40 Score=374.44 Aligned_cols=256 Identities=23% Similarity=0.265 Sum_probs=206.4
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
.++|++.+.||+|+||+||+|++..+++.||||++.+. .....+.+|+.++..++||||+++++++.+++..|+|
T Consensus 73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV 152 (437)
T 4aw2_A 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLV 152 (437)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEE
Confidence 46899999999999999999999999999999998752 2233478999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccc
Q 002061 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 153 ~Ey~~gg~L~~~l~~~----~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~ 225 (437)
T 4aw2_A 153 MDYYVGGDLLTLLSKF----EDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKL 225 (437)
T ss_dssp ECCCTTCBHHHHHHTT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EecCCCCcHHHHHHHc----cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhhhhhc
Confidence 9999999999999753 345899999999999999999999 789999999999999999999999999999766
Q ss_pred cCCCCcccccccCCccccccccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccc
Q 002061 830 ENSPKVSDYSCFAGTHGYIAPELAY-----TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
..... .......||+.|+|||++. +..++.++||||+||++|||++|+.||... +.............
T Consensus 226 ~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~-----~~~~~~~~i~~~~~- 298 (437)
T 4aw2_A 226 MEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE-----SLVETYGKIMNHKE- 298 (437)
T ss_dssp CTTSC-EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHTHHH-
T ss_pred ccCCC-cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC-----ChhHHHHhhhhccc-
Confidence 44322 2223357999999999987 567899999999999999999999999653 11111111111100
Q ss_pred cchhccccccCcchHHHHHHHHHHHHHhcCCCCCC--CCCHHHHHHHh
Q 002061 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNL--RPPMREVVKML 950 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rpt~~evl~~L 950 (973)
....+.. .......+.+++.+|+..+|++ ||++.|+++|-
T Consensus 299 --~~~~p~~----~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hp 340 (437)
T 4aw2_A 299 --RFQFPTQ----VTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHP 340 (437)
T ss_dssp --HCCCCSS----CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSG
T ss_pred --cccCCcc----cccCCHHHHHHHHHHhcccccccCCCCHHHHhCCC
Confidence 0000111 0112345788999999988888 99999999874
No 99
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.3e-39 Score=359.87 Aligned_cols=254 Identities=22% Similarity=0.321 Sum_probs=203.1
Q ss_pred HHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeec---cccHHHHHHHHHHHHhcCCCceeeEEEEEEeCC-----
Q 002061 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK---GDGVKVFAAEMEILGKIRHRNILKLYACLLKGG----- 744 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----- 744 (973)
+..++|++.+.||+|+||+||+|++..+++.||||++.. +...+.+.+|++++++++||||+++++++.+..
T Consensus 3 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 3 RYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HHHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred hhhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 346789999999999999999999998999999999864 234567899999999999999999999986543
Q ss_pred ----------------------------------------------------eeEEEEEccCCCchHHHHHhhhcCCCCC
Q 002061 745 ----------------------------------------------------SSFLVLEYMPNGNLFQALHKRVKEGKPE 772 (973)
Q Consensus 745 ----------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~~ 772 (973)
..++||||+++|+|.+++... .....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~ 160 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRR--CSLED 160 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTC--CSGGG
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcc--cCccc
Confidence 379999999999999999864 23344
Q ss_pred CCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccCCCCc----------ccccccC
Q 002061 773 LDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV----------SDYSCFA 842 (973)
Q Consensus 773 ~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~----------~~~~~~~ 842 (973)
.++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++........ .......
T Consensus 161 ~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T 3qd2_B 161 REHGVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQV 237 (332)
T ss_dssp SCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccC
Confidence 677788999999999999999 789999999999999999999999999999876543211 1223356
Q ss_pred CccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhccccccCcchHHHH
Q 002061 843 GTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDM 922 (973)
Q Consensus 843 gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (973)
||+.|+|||++.+..++.++||||+||++|||++|..|+... ....... .. ...+.......
T Consensus 238 gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-------~~~~~~~-~~----------~~~~~~~~~~~ 299 (332)
T 3qd2_B 238 GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-------VRIITDV-RN----------LKFPLLFTQKY 299 (332)
T ss_dssp -CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-------HHHHHHH-HT----------TCCCHHHHHHC
T ss_pred CCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-------HHHHHHh-hc----------cCCCcccccCC
Confidence 999999999999999999999999999999999987775321 0111111 00 01112234445
Q ss_pred HHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 923 IKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 923 ~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
..+.+++.+||+.||++|||+.|++++
T Consensus 300 ~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 300 PQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred hhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 667899999999999999999999985
No 100
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=4.8e-39 Score=353.09 Aligned_cols=264 Identities=23% Similarity=0.279 Sum_probs=203.2
Q ss_pred HHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEE
Q 002061 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
...++|++.+.||+|+||+||+|++.. ++.||||++... .....+.+|++++++++||||+++++++.++...++
T Consensus 18 ~l~~~y~~~~~lG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 96 (311)
T 3niz_A 18 GLMEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTL 96 (311)
T ss_dssp CSSCEEEEEEEEEECSSCEEEEEEETT-SCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEE
T ss_pred chHhhhHhhhhccCCCCeEEEEEEECC-CCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEE
Confidence 345789999999999999999999965 889999998653 224568899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccc
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||++ |+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 97 v~e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~ 168 (311)
T 3niz_A 97 VFEFME-KDLKKVLDEN----KTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARA 168 (311)
T ss_dssp EEECCS-EEHHHHHHTC----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEcCCC-CCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCcee
Confidence 999997 5888888643 345889999999999999999999 78999999999999999999999999999987
Q ss_pred ccCCCCcccccccCCcccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccc--c
Q 002061 829 AENSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN--V 905 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~--~ 905 (973)
...... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... .+....+......... .
T Consensus 169 ~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~ 244 (311)
T 3niz_A 169 FGIPVR--SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTD--DDQLPKIFSILGTPNPREW 244 (311)
T ss_dssp TTSCCC-----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSST--TTHHHHHHHHHCCCCTTTS
T ss_pred cCCCcc--cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHHCCCChHHh
Confidence 643322 2233568999999999876 5689999999999999999999999976422 2222222211111100 0
Q ss_pred ch-------------hccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 906 LK-------------VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 906 ~~-------------~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.. ................++.+++.+|+++||++|||+.|+++|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 245 PQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp GGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 00 000000000011223567899999999999999999999985
No 101
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.4e-39 Score=360.00 Aligned_cols=261 Identities=23% Similarity=0.324 Sum_probs=194.6
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCc---EEEEEeeec----cccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCee-
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAG---TVAVKQLWK----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSS- 746 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~---~vavK~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~- 746 (973)
.++|++.+.||+|+||+||+|++..+++ .||||++.. ....+.+.+|++++++++||||+++++++......
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 4579999999999999999999887664 899998865 23457789999999999999999999999876654
Q ss_pred -----EEEEEccCCCchHHHHHhhhcC-CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEE
Q 002061 747 -----FLVLEYMPNGNLFQALHKRVKE-GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKI 820 (973)
Q Consensus 747 -----~lv~e~~~~gsL~~~l~~~~~~-~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 820 (973)
++||||+++|+|.+++...... ....+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEEE
Confidence 9999999999999999765322 2235899999999999999999999 789999999999999999999999
Q ss_pred ecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHh
Q 002061 821 ADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHL 899 (973)
Q Consensus 821 ~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~ 899 (973)
+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |+.||.... .......+...
T Consensus 179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~--~~~~~~~~~~~- 255 (323)
T 3qup_A 179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE--NAEIYNYLIGG- 255 (323)
T ss_dssp CCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--GGGHHHHHHTT-
T ss_pred eeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccC--hHHHHHHHhcC-
Confidence 99999987654433333334557889999999999999999999999999999999 999997542 22222211111
Q ss_pred ccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002061 900 NNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
.. ..........+.+++.+||+.||++|||+.++++.|+++.
T Consensus 256 --~~-----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l 297 (323)
T 3qup_A 256 --NR-----------LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297 (323)
T ss_dssp --CC-----------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CC-----------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 00 0111223456889999999999999999999999999764
No 102
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=363.31 Aligned_cols=254 Identities=28% Similarity=0.357 Sum_probs=193.0
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEEccC
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
.++|++.+.||+|+||+||+|++..+++.||||++......+.+.+|++++++++||||+++++++..++..++||||++
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 131 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVT 131 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCC
Confidence 46789999999999999999999998999999999877667778899999999999999999999999999999999999
Q ss_pred CCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecC---CCCeEEecccCcccccC
Q 002061 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE---DYEPKIADFGVAKIAEN 831 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~Dfgl~~~~~~ 831 (973)
+|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+++....
T Consensus 132 ~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 203 (349)
T 2w4o_A 132 GGELFDRIVE-----KGYYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203 (349)
T ss_dssp SCBHHHHHTT-----CSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred CCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence 9999999864 235889999999999999999999 789999999999999975 88999999999986543
Q ss_pred CCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhccc
Q 002061 832 SPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDC 911 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..............
T Consensus 204 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~~~~i~~~~~~~------ 270 (349)
T 2w4o_A 204 QV---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD----QFMFRRILNCEYYF------ 270 (349)
T ss_dssp ------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH----HHHHHHHHTTCCCC------
T ss_pred cc---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc----HHHHHHHHhCCCcc------
Confidence 22 123356899999999999999999999999999999999999999654211 11111111111100
Q ss_pred cccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 912 EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 912 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
...........+.+++.+|++.||++|||+.|++++-.
T Consensus 271 --~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 308 (349)
T 2w4o_A 271 --ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPW 308 (349)
T ss_dssp --CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTT
T ss_pred --CCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 00111223456889999999999999999999998743
No 103
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-39 Score=364.00 Aligned_cols=265 Identities=23% Similarity=0.314 Sum_probs=210.3
Q ss_pred HcCCcccCcccccCceEEEEEEec-----CCCcEEEEEeeecc---ccHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCe
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLK-----KNAGTVAVKQLWKG---DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGS 745 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~-----~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~ 745 (973)
.++|++.+.||+|+||+||+|++. .++..||||++... ...+.+.+|+++++++ +||||+++++++..++.
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 123 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP 123 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence 468899999999999999999973 35678999998653 3456788999999999 89999999999999999
Q ss_pred eEEEEEccCCCchHHHHHhhhcC------------------CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCC
Q 002061 746 SFLVLEYMPNGNLFQALHKRVKE------------------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKS 807 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~------------------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp 807 (973)
.++||||+++|+|.+++...... ....+++..+..++.|++.||+||| +++|+||||||
T Consensus 124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp 200 (344)
T 1rjb_A 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAA 200 (344)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCSG
T ss_pred cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCh
Confidence 99999999999999999864211 0124789999999999999999999 78999999999
Q ss_pred CCeeecCCCCeEEecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccC
Q 002061 808 SNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYG 886 (973)
Q Consensus 808 ~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~ 886 (973)
+||+++.++.+||+|||++................||+.|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 201 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 280 (344)
T 1rjb_A 201 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV 280 (344)
T ss_dssp GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred hhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCc
Confidence 999999999999999999987654433333334567889999999999999999999999999999998 9999976422
Q ss_pred CcccHHHHHHHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCC
Q 002061 887 DGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCT 957 (973)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 957 (973)
. ......+.... ....+......+.+++.+||+.||.+||++.|++++|+.+....
T Consensus 281 ~-~~~~~~~~~~~--------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 281 D-ANFYKLIQNGF--------------KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp S-HHHHHHHHTTC--------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred H-HHHHHHHhcCC--------------CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 1 11111111110 00111122456888999999999999999999999999876544
No 104
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.5e-39 Score=358.89 Aligned_cols=250 Identities=28% Similarity=0.395 Sum_probs=205.7
Q ss_pred HHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-----ccHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCee
Q 002061 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSS 746 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 746 (973)
...++|++.+.||+|+||+||+|+++.+++.||||++.+. ...+.+.+|..+++.+ +||||+++++++.+++..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 3457899999999999999999999999999999998763 3456678899999887 999999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCc
Q 002061 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
|+||||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++
T Consensus 94 ~lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a 165 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSC-----HKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMC 165 (345)
T ss_dssp EEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhh
Confidence 9999999999999999764 35889999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccc
Q 002061 827 KIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
+...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||... +...............
T Consensus 166 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~-----~~~~~~~~i~~~~~~~- 237 (345)
T 1xjd_A 166 KENMLGD--AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ-----DEEELFHSIRMDNPFY- 237 (345)
T ss_dssp BCCCCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCC-
T ss_pred hhcccCC--CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHHHhCCCCC-
Confidence 7543221 1233467999999999999999999999999999999999999999653 1122222221111111
Q ss_pred hhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHH-HHHHH
Q 002061 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMR-EVVKM 949 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~-evl~~ 949 (973)
+......+.+++.+|++.||++||++. |+.+|
T Consensus 238 -----------p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 238 -----------PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp -----------CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred -----------CcccCHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 111234678899999999999999997 77654
No 105
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=6.7e-39 Score=356.80 Aligned_cols=248 Identities=21% Similarity=0.269 Sum_probs=208.3
Q ss_pred HHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEE
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
..++|++.+.||+|+||+||+|++..+++.||||++.+. ...+.+.+|+++++.++||||+++++++.++...|+
T Consensus 39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 118 (350)
T 1rdq_E 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118 (350)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence 356899999999999999999999999999999998653 345678899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccc
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.
T Consensus 119 v~e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~ 190 (350)
T 1rdq_E 119 VMEYVAGGEMFSHLRRI-----GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190 (350)
T ss_dssp EEECCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEcCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEccccccee
Confidence 99999999999999864 24889999999999999999999 78999999999999999999999999999986
Q ss_pred ccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchh
Q 002061 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||... +..............
T Consensus 191 ~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~-----~~~~~~~~i~~~~~~---- 256 (350)
T 1rdq_E 191 VKGR-----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD-----QPIQIYEKIVSGKVR---- 256 (350)
T ss_dssp CSSC-----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCC----
T ss_pred ccCC-----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCC-----CHHHHHHHHHcCCCC----
Confidence 6432 12356899999999999999999999999999999999999999653 122222222111110
Q ss_pred ccccccCcchHHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHHhh
Q 002061 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPP-----MREVVKMLA 951 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-----~~evl~~L~ 951 (973)
. +......+.+++.+|++.||.+||+ +.|+++|-.
T Consensus 257 ----~----p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~ 296 (350)
T 1rdq_E 257 ----F----PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296 (350)
T ss_dssp ----C----CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred ----C----CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcC
Confidence 0 1122456789999999999999998 899987643
No 106
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.5e-39 Score=358.08 Aligned_cols=262 Identities=27% Similarity=0.399 Sum_probs=211.6
Q ss_pred HcCCcccCcccccCceEEEEEEe-----cCCCcEEEEEeeeccc---cHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCe
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDL-----KKNAGTVAVKQLWKGD---GVKVFAAEMEILGKI-RHRNILKLYACLLKGGS 745 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~-----~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~ 745 (973)
.++|++.+.||+|+||+||+|++ ..+++.||||++.... ..+.+.+|+++++++ +||||+++++++..++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 35788999999999999999985 3567899999987642 346788999999999 99999999999999999
Q ss_pred eEEEEEccCCCchHHHHHhhhc-------------CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeee
Q 002061 746 SFLVLEYMPNGNLFQALHKRVK-------------EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL 812 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~-------------~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill 812 (973)
.++||||+++|+|.+++..... .....+++..+..++.|+++||+||| +++++||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEE
Confidence 9999999999999999986421 11234899999999999999999999 7899999999999999
Q ss_pred cCCCCeEEecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccH
Q 002061 813 DEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDI 891 (973)
Q Consensus 813 ~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~ 891 (973)
+.++.+||+|||++................+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... ...
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~ 257 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-SKF 257 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS-HHH
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch-hHH
Confidence 9999999999999987765443333334557889999999999999999999999999999999 99999764221 111
Q ss_pred HHHHHHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002061 892 VYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
...+..... ..........+.+++.+|++.||.+|||+.|++++|+++.
T Consensus 258 ~~~~~~~~~--------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 258 YKMIKEGFR--------------MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp HHHHHHTCC--------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHhccCCC--------------CCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 111111100 0011122456889999999999999999999999998754
No 107
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=7.1e-39 Score=350.57 Aligned_cols=265 Identities=26% Similarity=0.356 Sum_probs=205.7
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHh--cCCCceeeEEEEEEe----CCeeEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGK--IRHRNILKLYACLLK----GGSSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~--l~hpniv~l~~~~~~----~~~~~l 748 (973)
.++|++.+.||+|+||+||+|++. ++.||||++... ....+.+|.+++.. ++||||+++++++.. ....++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l 83 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSWQ--GENVAVKIFSSR-DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEET--TEEEEEEEECGG-GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEEC--CEEEEEEEeccc-cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence 467899999999999999999884 889999988654 34556677777766 799999999998654 345899
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcC-----CCCeEecCCCCCCeeecCCCCeEEecc
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDC-----SPPIIHRDIKSSNILLDEDYEPKIADF 823 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~Dlkp~Nill~~~~~~kl~Df 823 (973)
||||+++|+|.++++. ..+++..+..++.|++.||+|||+.. +++|+||||||+||+++.++.+||+||
T Consensus 84 v~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 157 (301)
T 3q4u_A 84 ITHYHEMGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADL 157 (301)
T ss_dssp EECCCTTCBHHHHHTT------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCC
T ss_pred ehhhccCCCHHHHHhh------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeC
Confidence 9999999999999953 25899999999999999999999321 468999999999999999999999999
Q ss_pred cCcccccCCCCcc--cccccCCccccccccccccC------CCCccchHHHHHHHHHHHHhC----------CCCCCccc
Q 002061 824 GVAKIAENSPKVS--DYSCFAGTHGYIAPELAYTC------KVSEKSDVFSFGVVLLELVTG----------RKPVEEEY 885 (973)
Q Consensus 824 gl~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~~l~el~tg----------~~pf~~~~ 885 (973)
|+++......... ......||+.|+|||++.+. .++.++|||||||++|||++| +.||....
T Consensus 158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~ 237 (301)
T 3q4u_A 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237 (301)
T ss_dssp TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence 9997665433221 12234789999999999876 455799999999999999999 88887654
Q ss_pred CCcccHHHHHHHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002061 886 GDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
.................. ..... ...........+.+++.+||+.||++|||+.|+++.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 238 PNDPSFEDMRKVVCVDQQ-RPNIP----NRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CSSCCHHHHHHHHTTSCC-CCCCC----GGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCcchhhhhHHHhccCC-CCCCC----hhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 443333333222211111 00000 0112234567899999999999999999999999999864
No 108
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=7.3e-39 Score=355.98 Aligned_cols=254 Identities=24% Similarity=0.347 Sum_probs=205.2
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-----ccHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeeEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l 748 (973)
..+|++.+.||+|+||+||+|+++.+++.||||++.+. ...+.+.+|..+++++ +||||+++++++.+++..|+
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 46789999999999999999999999999999998753 2345678899999988 89999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccc
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.
T Consensus 88 v~e~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~ 159 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 159 (345)
T ss_dssp EECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBC
T ss_pred EEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEecccccc
Confidence 99999999999999764 35889999999999999999999 78999999999999999999999999999975
Q ss_pred ccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCc----ccHHHHHHHHhccccc
Q 002061 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDG----KDIVYWVSTHLNNHEN 904 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~----~~~~~~~~~~~~~~~~ 904 (973)
..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ................
T Consensus 160 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~ 237 (345)
T 3a8x_A 160 GLRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 237 (345)
T ss_dssp SCCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC
T ss_pred ccCCC--CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC
Confidence 43221 12334579999999999999999999999999999999999999996531111 1111111111111110
Q ss_pred cchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCH------HHHHHHh
Q 002061 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPM------REVVKML 950 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~------~evl~~L 950 (973)
.+......+.+++.+|++.||.+||++ .|+++|-
T Consensus 238 ------------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp 277 (345)
T 3a8x_A 238 ------------IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP 277 (345)
T ss_dssp ------------CCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSG
T ss_pred ------------CCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCC
Confidence 111234467889999999999999995 7787663
No 109
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.2e-39 Score=362.21 Aligned_cols=262 Identities=25% Similarity=0.379 Sum_probs=210.6
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCc-----EEEEEeeecc---ccHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCe
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAG-----TVAVKQLWKG---DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGS 745 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~-----~vavK~~~~~---~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~ 745 (973)
.++|++.+.||+|+||+||+|.+..+++ .||||++... ...+.+.+|+++++++ +||||+++++++..++.
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 124 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence 4688999999999999999999876554 7999998764 3456688999999999 89999999999999999
Q ss_pred eEEEEEccCCCchHHHHHhhhcC---------CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCC
Q 002061 746 SFLVLEYMPNGNLFQALHKRVKE---------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY 816 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~---------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~ 816 (973)
.++||||+++|+|.+++...... ....+++..+..++.|++.||+||| +.+|+||||||+||+++.++
T Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~ 201 (333)
T 2i1m_A 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGH 201 (333)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEEEGGG
T ss_pred eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEECCCC
Confidence 99999999999999999764211 1235789999999999999999999 78999999999999999999
Q ss_pred CeEEecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHH
Q 002061 817 EPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWV 895 (973)
Q Consensus 817 ~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~ 895 (973)
.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |..||...... ......+
T Consensus 202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~~~~ 280 (333)
T 2i1m_A 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN-SKFYKLV 280 (333)
T ss_dssp EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS-HHHHHHH
T ss_pred eEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh-HHHHHHH
Confidence 999999999986654433333334557889999999999999999999999999999998 99999754211 1111111
Q ss_pred HHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002061 896 STHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
...... ..+......+.+++.+||+.||.+||++.|++++|+++.
T Consensus 281 ~~~~~~--------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 281 KDGYQM--------------AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp HHTCCC--------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hcCCCC--------------CCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 111100 001112346788999999999999999999999998753
No 110
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2e-39 Score=378.70 Aligned_cols=258 Identities=26% Similarity=0.351 Sum_probs=214.3
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEEcc
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
..+|++.+.||+|+||+||+|++..++..||||++... ...+.+.+|++++++++||||+++++++..+...|+||||+
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~ 298 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 298 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence 35678899999999999999999988999999998763 45678999999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccCCC
Q 002061 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++|+|.+++... ....+++..+..++.|+++||+||| +++|+||||||+|||++.++.+||+|||+++......
T Consensus 299 ~~g~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 372 (495)
T 1opk_A 299 TYGNLLDYLREC---NRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 372 (495)
T ss_dssp TTCBHHHHHHHS---CTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC
T ss_pred CCCCHHHHHHhc---CcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccCCc
Confidence 999999999753 3345889999999999999999999 7899999999999999999999999999998664332
Q ss_pred CcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccccchhcccc
Q 002061 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
. .......++..|+|||++.+..++.++|||||||++|||++ |+.||... +.......+...
T Consensus 373 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~--~~~~~~~~~~~~-------------- 435 (495)
T 1opk_A 373 Y-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI--DLSQVYELLEKD-------------- 435 (495)
T ss_dssp E-ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC--CGGGHHHHHHTT--------------
T ss_pred e-eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcC--------------
Confidence 1 22223456789999999998899999999999999999999 99999754 222222222111
Q ss_pred ccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002061 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
.....+......+.+++.+||+.||++||++.++++.|+.+..
T Consensus 436 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 436 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred CCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 1111122334568899999999999999999999999998753
No 111
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=355.29 Aligned_cols=250 Identities=28% Similarity=0.323 Sum_probs=198.6
Q ss_pred HHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc----------------------------cHHHHHHHHHHH
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----------------------------GVKVFAAEMEIL 725 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----------------------------~~~~~~~E~~~l 725 (973)
..++|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|++++
T Consensus 11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 90 (298)
T 2zv2_A 11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL 90 (298)
T ss_dssp EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence 3568999999999999999999999999999999986532 135688999999
Q ss_pred HhcCCCceeeEEEEEEe--CCeeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEec
Q 002061 726 GKIRHRNILKLYACLLK--GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHR 803 (973)
Q Consensus 726 ~~l~hpniv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~ 803 (973)
++++||||+++++++.+ ++..|+||||+++|+|.+++. ...+++..+..++.|+++||+||| +.+|+||
T Consensus 91 ~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~------~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~ 161 (298)
T 2zv2_A 91 KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT------LKPLSEDQARFYFQDLIKGIEYLH---YQKIIHR 161 (298)
T ss_dssp HTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC------SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred HhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecc
Confidence 99999999999999986 568899999999999977543 236899999999999999999999 7899999
Q ss_pred CCCCCCeeecCCCCeEEecccCcccccCCCCcccccccCCccccccccccccCC---CCccchHHHHHHHHHHHHhCCCC
Q 002061 804 DIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCK---VSEKSDVFSFGVVLLELVTGRKP 880 (973)
Q Consensus 804 Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslG~~l~el~tg~~p 880 (973)
||||+||+++.++.+||+|||+++....... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.|
T Consensus 162 Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p 239 (298)
T 2zv2_A 162 DIKPSNLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239 (298)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCS
T ss_pred CCCHHHEEECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCC
Confidence 9999999999999999999999987654322 223457899999999997665 47789999999999999999999
Q ss_pred CCcccCCcccHHHHHHHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 881 VEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 881 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
|... ................ .........+.+++.+||+.||++||++.|+++|
T Consensus 240 f~~~-----~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 240 FMDE-----RIMCLHSKIKSQALEF----------PDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp SCCS-----SHHHHHHHHHHCCCCC----------CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred CCCc-----cHHHHHHHHhcccCCC----------CCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 9653 1222211111111000 0011223468899999999999999999999875
No 112
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=4.2e-39 Score=371.77 Aligned_cols=251 Identities=28% Similarity=0.406 Sum_probs=207.8
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhcCCCceeeEEEEEEeCC-eeEEEEEcc
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKGG-SSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-~~~lv~e~~ 753 (973)
.++|++.+.||+|+||+||+|++. ++.||||+++.....+.+.+|++++++++||||+++++++.... ..|+||||+
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~ 269 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 269 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEec
Confidence 457888999999999999999986 77999999988777788999999999999999999999987665 789999999
Q ss_pred CCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccCCC
Q 002061 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++|+|.+++... ....+++..+..++.|+++||+||| +++++||||||+||+++.++.+||+|||+++......
T Consensus 270 ~~g~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 343 (450)
T 1k9a_A 270 AKGSLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 343 (450)
T ss_dssp TTCBHHHHHHHH---CTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC---
T ss_pred CCCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc
Confidence 999999999864 2334788999999999999999999 7899999999999999999999999999998543221
Q ss_pred CcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccccchhcccc
Q 002061 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
....++..|+|||++.+..++.++|||||||++|||++ |+.||.... ..+....+....
T Consensus 344 -----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~--~~~~~~~i~~~~------------- 403 (450)
T 1k9a_A 344 -----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--LKDVVPRVEKGY------------- 403 (450)
T ss_dssp --------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSC--TTTHHHHHHTTC-------------
T ss_pred -----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcCC-------------
Confidence 12356889999999999999999999999999999998 999997542 222222221110
Q ss_pred ccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002061 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
....+......+.+++.+||+.||++|||+.++++.|+++.
T Consensus 404 -~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~ 444 (450)
T 1k9a_A 404 -KMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444 (450)
T ss_dssp -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 01111223456889999999999999999999999998764
No 113
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=4e-39 Score=364.77 Aligned_cols=255 Identities=23% Similarity=0.303 Sum_probs=206.6
Q ss_pred HHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEE
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
..++|++.+.||+|+||+||+|++..+++.||||++.+. ...+.+.+|+.+++.++||||+++++++.+++..|+
T Consensus 67 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 146 (410)
T 3v8s_A 67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYM 146 (410)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence 356899999999999999999999999999999998652 234457899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccc
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.
T Consensus 147 V~E~~~gg~L~~~l~~~------~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~~ 217 (410)
T 3v8s_A 147 VMEYMPGGDLVNLMSNY------DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 217 (410)
T ss_dssp EECCCTTEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEeCCCCCcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeEe
Confidence 99999999999998753 4788999999999999999999 78999999999999999999999999999986
Q ss_pred ccCCCCcccccccCCccccccccccccCC----CCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccc
Q 002061 829 AENSPKVSDYSCFAGTHGYIAPELAYTCK----VSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
...... .......||+.|+|||++.+.. ++.++|||||||++|||++|+.||... +..............
T Consensus 218 ~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~-----~~~~~~~~i~~~~~~ 291 (410)
T 3v8s_A 218 MNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD-----SLVGTYSKIMNHKNS 291 (410)
T ss_dssp CCTTSE-EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHTHHHH
T ss_pred eccCCc-ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCC-----ChhhHHHHHHhcccc
Confidence 654322 1223467999999999997665 788999999999999999999999653 112222211111000
Q ss_pred cchhccccccCcchHHHHHHHHHHHHHhcCCCCCC--CCCHHHHHHHhh
Q 002061 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNL--RPPMREVVKMLA 951 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rpt~~evl~~L~ 951 (973)
. .+ + ........+.+++.+|++.+|.+ ||++.||++|-.
T Consensus 292 ~-~~--p-----~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~ 332 (410)
T 3v8s_A 292 L-TF--P-----DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 332 (410)
T ss_dssp C-CC--C-----TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGG
T ss_pred c-cC--C-----CcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCcc
Confidence 0 00 0 00122346788999999999998 999999998754
No 114
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=7.8e-39 Score=356.15 Aligned_cols=251 Identities=27% Similarity=0.344 Sum_probs=206.5
Q ss_pred HHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-----ccHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCee
Q 002061 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSS 746 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 746 (973)
....+|++.+.||+|+||+||+|++..+++.||||++.+. ...+.+.+|..++..+ +||+|+++++++...+..
T Consensus 17 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~ 96 (353)
T 2i0e_A 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 96 (353)
T ss_dssp --CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred CchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence 3457899999999999999999999998999999998753 3456788999999988 899999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCc
Q 002061 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
|+||||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++
T Consensus 97 ~lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a 168 (353)
T 2i0e_A 97 YFVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMC 168 (353)
T ss_dssp EEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCcc
Confidence 9999999999999999864 25889999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccc
Q 002061 827 KIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||... +...............
T Consensus 169 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~-----~~~~~~~~i~~~~~~~- 240 (353)
T 2i0e_A 169 KENIWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE-----DEDELFQSIMEHNVAY- 240 (353)
T ss_dssp BCCCCTT--CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCC-
T ss_pred cccccCC--cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCC-----CHHHHHHHHHhCCCCC-
Confidence 7543221 1233457999999999999999999999999999999999999999653 1222222222111110
Q ss_pred hhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHHh
Q 002061 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPP-----MREVVKML 950 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-----~~evl~~L 950 (973)
+......+.+++.+|++.||.+||+ +.|+++|-
T Consensus 241 -----------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~ 278 (353)
T 2i0e_A 241 -----------PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHA 278 (353)
T ss_dssp -----------CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSG
T ss_pred -----------CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCc
Confidence 1123456788999999999999995 58888763
No 115
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.7e-39 Score=362.38 Aligned_cols=255 Identities=24% Similarity=0.262 Sum_probs=198.9
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEEcc
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|+.++++++||||+++++++..++..|+||||+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 98 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYA 98 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeC
Confidence 46899999999999999999999999999999998763 33466889999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCC--eEEecccCcccccC
Q 002061 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE--PKIADFGVAKIAEN 831 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~--~kl~Dfgl~~~~~~ 831 (973)
++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++. +||+|||+++....
T Consensus 99 ~~~~L~~~l~~~-----~~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~ 170 (361)
T 3uc3_A 99 SGGELYERICNA-----GRFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 170 (361)
T ss_dssp CSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred CCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence 999999999754 25899999999999999999999 789999999999999987765 99999999874432
Q ss_pred CCCcccccccCCccccccccccccCCCCcc-chHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhcc
Q 002061 832 SPKVSDYSCFAGTHGYIAPELAYTCKVSEK-SDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
.. ......||+.|+|||++.+..++.+ +||||+||++|+|++|+.||..... .......+..........
T Consensus 171 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-~~~~~~~~~~~~~~~~~~----- 241 (361)
T 3uc3_A 171 HS---QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEE-PRDYRKTIQRILSVKYSI----- 241 (361)
T ss_dssp -------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC-----CCCHHHHHHHHHTTCCCC-----
T ss_pred cC---CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCcc-HHHHHHHHHHHhcCCCCC-----
Confidence 21 2233568999999999988887765 8999999999999999999976422 222233322222111110
Q ss_pred ccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.........+.+++.+||+.||++|||+.|+++|-.
T Consensus 242 -----~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~ 277 (361)
T 3uc3_A 242 -----PDDIRISPECCHLISRIFVADPATRISIPEIKTHSW 277 (361)
T ss_dssp -----CTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHH
T ss_pred -----CCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcc
Confidence 001112346789999999999999999999998743
No 116
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=8.5e-39 Score=356.76 Aligned_cols=278 Identities=17% Similarity=0.170 Sum_probs=208.0
Q ss_pred HcCCcccCcccccCceEEEEEEecC---CCcEEEEEeeeccc-------------cHHHHHHHHHHHHhcCCCceeeEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKK---NAGTVAVKQLWKGD-------------GVKVFAAEMEILGKIRHRNILKLYA 738 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~---~~~~vavK~~~~~~-------------~~~~~~~E~~~l~~l~hpniv~l~~ 738 (973)
.++|++.+.||+|+||+||+|++.. ++..||||+..... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 4579999999999999999999986 78899999886532 1123567888899999999999999
Q ss_pred EEEe----CCeeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecC
Q 002061 739 CLLK----GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE 814 (973)
Q Consensus 739 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~ 814 (973)
++.. +...|+||||+ +++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~ 186 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQN-----GTFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGY 186 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGG-----GBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEES
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEcc
Confidence 9987 67899999999 99999998754 26899999999999999999999 789999999999999998
Q ss_pred CC--CeEEecccCcccccCCCCc-----ccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCC
Q 002061 815 DY--EPKIADFGVAKIAENSPKV-----SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGD 887 (973)
Q Consensus 815 ~~--~~kl~Dfgl~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~ 887 (973)
++ .+||+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 187 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~ 266 (345)
T 2v62_A 187 KNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKD 266 (345)
T ss_dssp SSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTC
T ss_pred CCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccc
Confidence 87 9999999999866432111 1123457899999999999999999999999999999999999999654222
Q ss_pred cccHHHHHHHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCCC
Q 002061 888 GKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCTDKSPDNSSDK 967 (973)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~~~~~s~~ 967 (973)
...............+ ........ .......+.+++.+||+.||++||++.+|++.|++......+..-+....
T Consensus 267 ~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~d~~~~~~ 340 (345)
T 2v62_A 267 PVAVQTAKTNLLDELP---QSVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIPLGPLDFSTKGQ 340 (345)
T ss_dssp HHHHHHHHHHHHHTTT---HHHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCCCCCCCCCCTTC
T ss_pred cHHHHHHHHhhccccc---HHHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCcccCCCcccCCc
Confidence 2222222211111111 00000000 00234468899999999999999999999999999876554444333333
No 117
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=6.9e-39 Score=348.09 Aligned_cols=253 Identities=29% Similarity=0.486 Sum_probs=203.4
Q ss_pred HHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc---------cHHHHHHHHHHHHhcCCCceeeEEEEEEeCC
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD---------GVKVFAAEMEILGKIRHRNILKLYACLLKGG 744 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 744 (973)
..++|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++.+..
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 96 (287)
T 4f0f_A 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP 96 (287)
T ss_dssp CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT
T ss_pred hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC
Confidence 3468899999999999999999999999999999885421 1267889999999999999999999986655
Q ss_pred eeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCC--eEecCCCCCCeeecCCCC-----
Q 002061 745 SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPP--IIHRDIKSSNILLDEDYE----- 817 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~Dlkp~Nill~~~~~----- 817 (973)
++||||+++|+|.+++... ...+++..+..++.|++.|++||| +.+ ++||||||+||+++.++.
T Consensus 97 --~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~ 167 (287)
T 4f0f_A 97 --RMVMEFVPCGDLYHRLLDK----AHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVC 167 (287)
T ss_dssp --EEEEECCTTCBHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCC
T ss_pred --eEEEEecCCCCHHHHHhcc----cCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCcee
Confidence 7999999999999988653 346899999999999999999999 778 999999999999988776
Q ss_pred eEEecccCcccccCCCCcccccccCCccccccccccc--cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHH
Q 002061 818 PKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAY--TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWV 895 (973)
Q Consensus 818 ~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~ 895 (973)
+||+|||+++.... ......||+.|+|||++. ...++.++||||+||++|||++|+.||..............
T Consensus 168 ~kl~Dfg~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~ 242 (287)
T 4f0f_A 168 AKVADFGLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI 242 (287)
T ss_dssp EEECCCTTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHH
T ss_pred EEeCCCCccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHH
Confidence 99999999974432 223356899999999983 45678999999999999999999999976432211111111
Q ss_pred HHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002061 896 STHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
.. ... ...........+.+++.+||+.||++||++.|+++.|+++
T Consensus 243 ~~---~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 243 RE---EGL----------RPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HH---SCC----------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred hc---cCC----------CCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 11 110 0111122345688999999999999999999999999864
No 118
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=5.6e-39 Score=361.73 Aligned_cols=253 Identities=19% Similarity=0.231 Sum_probs=207.7
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc--ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEEc
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
.++|++.+.||+|+||+||+|.+..+++.||+|++... .....+.+|++++++++||||+++++++.++...++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 46899999999999999999999999999999998764 3445688999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecC--CCCeEEecccCccccc
Q 002061 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE--DYEPKIADFGVAKIAE 830 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~--~~~~kl~Dfgl~~~~~ 830 (973)
+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+++...
T Consensus 130 ~~gg~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~ 202 (387)
T 1kob_A 130 LSGGELFDRIAAE----DYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 202 (387)
T ss_dssp CCCCBHHHHTTCT----TCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred CCCCcHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecC
Confidence 9999999988642 345899999999999999999999 789999999999999974 5779999999998765
Q ss_pred CCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhcc
Q 002061 831 NSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
.... .....||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..............
T Consensus 203 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~-----~~~~~~~i~~~~~~------ 268 (387)
T 1kob_A 203 PDEI---VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED-----DLETLQNVKRCDWE------ 268 (387)
T ss_dssp TTSC---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS-----HHHHHHHHHHCCCC------
T ss_pred CCcc---eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCCC------
Confidence 4322 233468999999999999999999999999999999999999997531 11111111111110
Q ss_pred ccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
............+.+++.+||+.||++|||+.|++++-
T Consensus 269 --~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp 306 (387)
T 1kob_A 269 --FDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHP 306 (387)
T ss_dssp --CCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTST
T ss_pred --CCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCc
Confidence 01111122345688999999999999999999999874
No 119
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.4e-39 Score=353.73 Aligned_cols=256 Identities=33% Similarity=0.498 Sum_probs=200.4
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEEccC
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
.++|++.+.||+|+||+||+|++. ++.||||++..+...+.+.+|++++++++||||+++++++. +..++||||++
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~ 82 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAE 82 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCT
T ss_pred HhHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCC
Confidence 357888999999999999999986 78899999987777788999999999999999999999876 34799999999
Q ss_pred CCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCC-eEEecccCcccccCCC
Q 002061 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE-PKIADFGVAKIAENSP 833 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~-~kl~Dfgl~~~~~~~~ 833 (973)
+|+|.+++... ...+.+++..+..++.|+++||+|||+...++|+||||||+||+++.++. +||+|||++......
T Consensus 83 ~~~L~~~l~~~--~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~- 159 (307)
T 2eva_A 83 GGSLYNVLHGA--EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH- 159 (307)
T ss_dssp TCBHHHHHHCS--SSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------
T ss_pred CCCHHHHHhcc--CCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc-
Confidence 99999999753 22234788899999999999999999432279999999999999998887 799999999755432
Q ss_pred CcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhccccc
Q 002061 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||............. .......
T Consensus 160 ----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~--~~~~~~~---------- 223 (307)
T 2eva_A 160 ----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWA--VHNGTRP---------- 223 (307)
T ss_dssp ---------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHH--HHTTCCC----------
T ss_pred ----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHH--HhcCCCC----------
Confidence 123458999999999999999999999999999999999999997542221111111 1111110
Q ss_pred cCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002061 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
.........+.+++.+||+.||++|||+.|++++|+.+..
T Consensus 224 --~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 224 --PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp --CCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred --CcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 0111223467889999999999999999999999987653
No 120
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.5e-38 Score=360.85 Aligned_cols=273 Identities=23% Similarity=0.328 Sum_probs=198.4
Q ss_pred cCHHHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeec----cccHHHHHHHHHHHHhcC-CCceeeEEEEEEeCC
Q 002061 670 IDAEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK----GDGVKVFAAEMEILGKIR-HRNILKLYACLLKGG 744 (973)
Q Consensus 670 ~~~~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~----~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~ 744 (973)
++.....+|++.+.||+|+||+||+|.+..+++.||||++.. ......+.+|+.+++++. ||||+++++++..++
T Consensus 3 v~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~ 82 (388)
T 3oz6_A 3 VDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADN 82 (388)
T ss_dssp -CHHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTT
T ss_pred ccCcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCC
Confidence 446678899999999999999999999999999999998854 234566789999999997 999999999997544
Q ss_pred --eeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEec
Q 002061 745 --SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIAD 822 (973)
Q Consensus 745 --~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 822 (973)
..|+||||++ |+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|
T Consensus 83 ~~~~~lv~e~~~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~D 152 (388)
T 3oz6_A 83 DRDVYLVFDYME-TDLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVAD 152 (388)
T ss_dssp SSCEEEEEECCS-EEHHHHHHHT------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECC
T ss_pred CCEEEEEecccC-cCHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecC
Confidence 7899999996 6999998753 5788899999999999999999 78999999999999999999999999
Q ss_pred ccCcccccCCCC-------------------cccccccCCcccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCC
Q 002061 823 FGVAKIAENSPK-------------------VSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVE 882 (973)
Q Consensus 823 fgl~~~~~~~~~-------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~pf~ 882 (973)
||+++....... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.
T Consensus 153 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~ 232 (388)
T 3oz6_A 153 FGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFP 232 (388)
T ss_dssp CTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred CcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCC
Confidence 999986543111 112234579999999999876 678999999999999999999999997
Q ss_pred cccCCcccHHHHHHHHhccccc--cch--------hc----------cccccCcc------------hHHHHHHHHHHHH
Q 002061 883 EEYGDGKDIVYWVSTHLNNHEN--VLK--------VL----------DCEVASES------------IKEDMIKLLKIAV 930 (973)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~~~~~--~~~--------~~----------~~~~~~~~------------~~~~~~~l~~l~~ 930 (973)
... ..+....+......... ... .+ ........ .......+.+++.
T Consensus 233 ~~~--~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~ 310 (388)
T 3oz6_A 233 GSS--TMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLD 310 (388)
T ss_dssp CSS--HHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHH
T ss_pred CCC--HHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHH
Confidence 541 11111111111100000 000 00 00000000 0022346889999
Q ss_pred HhcCCCCCCCCCHHHHHHH--hhcCC
Q 002061 931 VCTTKLPNLRPPMREVVKM--LADAD 954 (973)
Q Consensus 931 ~cl~~dP~~Rpt~~evl~~--L~~~~ 954 (973)
+||+.||++|||+.|+++| +....
T Consensus 311 ~~L~~dP~~R~t~~e~l~Hp~~~~~~ 336 (388)
T 3oz6_A 311 KLLQFNPNKRISANDALKHPFVSIFH 336 (388)
T ss_dssp HHCCSSGGGSCCHHHHTTSTTTTTTC
T ss_pred HhhccCcccCCCHHHHhCCHHHHHhc
Confidence 9999999999999999998 44443
No 121
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=9.9e-39 Score=362.62 Aligned_cols=273 Identities=17% Similarity=0.209 Sum_probs=207.2
Q ss_pred HcCCcccCccccc--CceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEE
Q 002061 675 ICNLEEDNLIGSG--GTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G--~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
.++|++.+.||+| +||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++..++..|+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4689999999999 9999999999999999999998753 234567889999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccc
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+..
T Consensus 104 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~ 177 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTH---FMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLS 177 (389)
T ss_dssp EEECCTTCBHHHHHHHT---CTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEccCCCCHHHHHhhh---cccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEccccccee
Confidence 99999999999999764 2345899999999999999999999 78999999999999999999999999998865
Q ss_pred ccCCCCc-----ccccccCCcccccccccccc--CCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhcc
Q 002061 829 AENSPKV-----SDYSCFAGTHGYIAPELAYT--CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNN 901 (973)
Q Consensus 829 ~~~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 901 (973)
....... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||........ ...........
T Consensus 178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~ 256 (389)
T 3gni_B 178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM-LLEKLNGTVPC 256 (389)
T ss_dssp CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH-HHHC-------
T ss_pred eccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHhcCCCCc
Confidence 4322111 11223468999999999987 6799999999999999999999999975422111 11100000000
Q ss_pred c--------c-------------ccchhcc--------c-cccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH--
Q 002061 902 H--------E-------------NVLKVLD--------C-EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM-- 949 (973)
Q Consensus 902 ~--------~-------------~~~~~~~--------~-~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~-- 949 (973)
. . ....... . .............+.+++.+||+.||++|||+.|+++|
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~ 336 (389)
T 3gni_B 257 LLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSF 336 (389)
T ss_dssp -------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGG
T ss_pred cccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHH
Confidence 0 0 0000000 0 00001122334568899999999999999999999987
Q ss_pred hhcCC
Q 002061 950 LADAD 954 (973)
Q Consensus 950 L~~~~ 954 (973)
++++.
T Consensus 337 f~~~~ 341 (389)
T 3gni_B 337 FKQIK 341 (389)
T ss_dssp GGGC-
T ss_pred HHHHh
Confidence 44443
No 122
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=3.5e-39 Score=354.60 Aligned_cols=273 Identities=21% Similarity=0.318 Sum_probs=206.6
Q ss_pred cCHHHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeec-----cccHHHHHHHHHHHHhcCCCceeeEEEEEEeCC
Q 002061 670 IDAEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGG 744 (973)
Q Consensus 670 ~~~~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~-----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 744 (973)
.+.....+|++.+.||+|+||+||+|.+..+++.||||++.. ....+.+.+|++++++++||||+++++++..++
T Consensus 26 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 105 (310)
T 2wqm_A 26 MGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN 105 (310)
T ss_dssp GTTSSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT
T ss_pred cccccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC
Confidence 334556789999999999999999999998899999998864 234566889999999999999999999999999
Q ss_pred eeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEeccc
Q 002061 745 SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFG 824 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 824 (973)
..++||||+++|+|.+++..... ....+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg 181 (310)
T 2wqm_A 106 ELNIVLELADAGDLSRMIKHFKK-QKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLG 181 (310)
T ss_dssp EEEEEEECCCSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC-
T ss_pred cEEEEEecCCCCCHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEecc
Confidence 99999999999999999976422 3445889999999999999999999 7899999999999999999999999999
Q ss_pred CcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccc
Q 002061 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
++........ ......|++.|+|||++.+..++.++||||||+++|+|++|+.||...... ............
T Consensus 182 ~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~-- 254 (310)
T 2wqm_A 182 LGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSLCKKIEQCD-- 254 (310)
T ss_dssp -------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC---HHHHHHHHHTTC--
T ss_pred ceeeecCCCc--cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh---HHHHHHHhhccc--
Confidence 9876543321 122346899999999999999999999999999999999999999754222 112211111110
Q ss_pred cchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCCCCCC
Q 002061 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCTDKSP 961 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~~ 961 (973)
............+.+++.+||+.||++||++.+++++|+++.+..+.++
T Consensus 255 --------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~~ 303 (310)
T 2wqm_A 255 --------YPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSL 303 (310)
T ss_dssp --------SCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC---
T ss_pred --------CCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhhh
Confidence 0000011234468899999999999999999999999999877655444
No 123
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.8e-39 Score=350.38 Aligned_cols=255 Identities=22% Similarity=0.321 Sum_probs=205.3
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEEcc
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.++|++.+.||+|+||+||+|++.. +..||||++... ...+++.+|++++++++||||+++++++.++...++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETT-TEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcC-CCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 4578999999999999999998874 778999998763 35677899999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccCCC
Q 002061 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++|+|.+++... ...+++..+..++.|++.||+||| +++++||||||+||+++.++.+||+|||+++......
T Consensus 102 ~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 174 (283)
T 3gen_A 102 ANGCLLNYLREM----RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174 (283)
T ss_dssp TTCBHHHHHHCG----GGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH
T ss_pred CCCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEccccccccccccc
Confidence 999999999753 235899999999999999999999 7899999999999999999999999999997664321
Q ss_pred CcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccccchhcccc
Q 002061 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
. .......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||.... .. ........... .
T Consensus 175 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~--~~---~~~~~~~~~~~-------~- 240 (283)
T 3gen_A 175 Y-TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT--NS---ETAEHIAQGLR-------L- 240 (283)
T ss_dssp H-HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC--HH---HHHHHHHTTCC-------C-
T ss_pred c-ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccC--hh---HHHHHHhcccC-------C-
Confidence 1 12223456788999999998899999999999999999998 999997541 11 11111111100 0
Q ss_pred ccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002061 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
..+......+.+++.+||+.||++|||+.|++++|+++.
T Consensus 241 ---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 241 ---YRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp ---CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---CCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence 001112346888999999999999999999999998753
No 124
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=357.12 Aligned_cols=257 Identities=23% Similarity=0.319 Sum_probs=201.1
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEE----EEEeeec---cccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTV----AVKQLWK---GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~v----avK~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
..+|++.+.||+|+||+||+|++..+++.| |+|.+.. ....+.+.+|++++++++||||+++++++..+. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 357899999999999999999998777665 6665543 345678899999999999999999999998765 78
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcc
Q 002061 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+|+||+++|+|.+++... ...+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++
T Consensus 93 ~v~~~~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~ 165 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEECCCSSCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred EEEEecCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence 899999999999999864 345889999999999999999999 7899999999999999999999999999998
Q ss_pred cccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccccc
Q 002061 828 IAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||... ........+.....
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~--~~~~~~~~~~~~~~------ 237 (327)
T 3lzb_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGER------ 237 (327)
T ss_dssp --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CGGGHHHHHHTTCC------
T ss_pred EccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCC--CHHHHHHHHHcCCC------
Confidence 7654443333344567889999999999999999999999999999999 99999764 22222222221110
Q ss_pred hhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002061 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
...+......+.+++.+||+.||.+||++.|+++.|+++..
T Consensus 238 --------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 238 --------LPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp --------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred --------CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 01111233468889999999999999999999999997653
No 125
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=371.09 Aligned_cols=347 Identities=18% Similarity=0.173 Sum_probs=224.5
Q ss_pred CCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccccCCcCCccccccccccEEEeec
Q 002061 195 LTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISS 274 (973)
Q Consensus 195 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~ 274 (973)
-+.++.++++++ .+|..+. +++++|+|++|+|++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 13 ~~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 89 (477)
T 2id5_A 13 DRAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89 (477)
T ss_dssp TTEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCC
Confidence 357788888887 5665543 5778888888888776677777777777777777777766677777777777777777
Q ss_pred cccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCCccccccccccccccccccccccCC
Q 002061 275 NQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFP 354 (973)
Q Consensus 275 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p 354 (973)
|++++..+..|.++++|++|++++|++.+..+..|..+++|+.|++++|.+++..+..|..+++|++|+|++|++++..
T Consensus 90 n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~- 168 (477)
T 2id5_A 90 NRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIP- 168 (477)
T ss_dssp SCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCC-
T ss_pred CcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccC-
Confidence 7777555555677777777777777777666666666666666666666666555555555555555555555554211
Q ss_pred hhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCC
Q 002061 355 KYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTS 434 (973)
Q Consensus 355 ~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~ 434 (973)
+..+.++++|+.|+|++|.+.+..+.. |..+++
T Consensus 169 -----------------------~~~l~~l~~L~~L~l~~n~i~~~~~~~------------------------~~~l~~ 201 (477)
T 2id5_A 169 -----------------------TEALSHLHGLIVLRLRHLNINAIRDYS------------------------FKRLYR 201 (477)
T ss_dssp -----------------------HHHHTTCTTCCEEEEESCCCCEECTTC------------------------SCSCTT
T ss_pred -----------------------hhHhcccCCCcEEeCCCCcCcEeChhh------------------------cccCcc
Confidence 112334455555555555555444444 445555
Q ss_pred CCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhccc
Q 002061 435 LSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLAR 514 (973)
Q Consensus 435 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 514 (973)
|+.|++++|.+.+.+|.......+|+.|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|+.|+|++
T Consensus 202 L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 281 (477)
T 2id5_A 202 LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVG 281 (477)
T ss_dssp CCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCS
T ss_pred cceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCC
Confidence 55555555555545555544455666666666666644445666666667777777766666666666777777777777
Q ss_pred cccccCCCccccccCCCCeeecCCCccCCCCChhhhccc-CceEEccCCccccccCcccccC-CCCccccCCCCCccCcc
Q 002061 515 NSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLDFLRM-GGDGAFAGNEGLCLDQS 592 (973)
Q Consensus 515 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-L~~l~ls~N~l~~~~p~~~~~~-~~~~~~~~n~~lc~~~~ 592 (973)
|++++..|..|..+++|+.|+|++|+|++..+..+..++ |+.|+|++|+|.|.|+..|..- .....+.++...|+.|.
T Consensus 282 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 282 GQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp SCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESG
T ss_pred CccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCch
Confidence 777766677777777777777777777765555555554 7777777777777776543321 11235666777776654
No 126
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=4.3e-39 Score=346.52 Aligned_cols=249 Identities=31% Similarity=0.420 Sum_probs=193.4
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc------ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG------DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~------~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
..+|++.+.||+|+||+||+|++. ++.||||++... ...+.+.+|+++++.++||||+++++++..++..++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCL 83 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence 467899999999999999999986 789999987652 234678899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCC---eEecCCCCCCeeecC--------CCC
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPP---IIHRDIKSSNILLDE--------DYE 817 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~---ivH~Dlkp~Nill~~--------~~~ 817 (973)
||||+++++|.+++.. ..+++..+..++.|+++|++||| +.+ ++||||||+||+++. ++.
T Consensus 84 v~e~~~~~~L~~~~~~------~~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~ 154 (271)
T 3dtc_A 84 VMEFARGGPLNRVLSG------KRIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKI 154 (271)
T ss_dssp EEECCTTEEHHHHHTS------SCCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCC
T ss_pred EEEcCCCCCHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcc
Confidence 9999999999998853 35889999999999999999999 556 999999999999986 678
Q ss_pred eEEecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHH
Q 002061 818 PKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVST 897 (973)
Q Consensus 818 ~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~ 897 (973)
+||+|||.+........ ....||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... . ......
T Consensus 155 ~kl~Dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--~---~~~~~~ 225 (271)
T 3dtc_A 155 LKITDFGLAREWHRTTK----MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID--G---LAVAYG 225 (271)
T ss_dssp EEECCCCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC--H---HHHHHH
T ss_pred eEEccCCcccccccccc----cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--H---HHHHHh
Confidence 99999999976543322 23468999999999999999999999999999999999999997531 1 111111
Q ss_pred HhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002061 898 HLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
...... ...........+.+++.+||+.||++|||+.|++++|+++
T Consensus 226 ~~~~~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 226 VAMNKL----------ALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp HHTSCC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred hhcCCC----------CCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 111110 0011122345688999999999999999999999999864
No 127
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2.8e-39 Score=374.03 Aligned_cols=259 Identities=26% Similarity=0.400 Sum_probs=209.8
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeec-cccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEEcc
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.++|++.+.||+|+||+||+|++.. +..||||++.. ....+.+.+|++++++++||||+++++++. ++..|+||||+
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~ 264 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFM 264 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETT-TEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred hHHeEEEEEcccCCceEEEEEEECC-ccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeec
Confidence 4577889999999999999999875 67899999876 345778999999999999999999999886 56789999999
Q ss_pred CCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccCCC
Q 002061 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++|+|.++++... ...+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++......
T Consensus 265 ~~g~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~ 338 (454)
T 1qcf_A 265 AKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 338 (454)
T ss_dssp TTCBHHHHHHSHH---HHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH
T ss_pred CCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc
Confidence 9999999997542 224788899999999999999999 7899999999999999999999999999998664321
Q ss_pred CcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccccchhcccc
Q 002061 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
. .......++..|+|||++.+..++.++|||||||++|||++ |+.||... ........+... ..
T Consensus 339 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~--~~~~~~~~i~~~---~~--------- 403 (454)
T 1qcf_A 339 Y-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM--SNPEVIRALERG---YR--------- 403 (454)
T ss_dssp H-HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHHHT---CC---------
T ss_pred e-eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcC---CC---------
Confidence 1 11223446789999999998899999999999999999999 99999653 111222221111 00
Q ss_pred ccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCCC
Q 002061 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCTD 958 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~ 958 (973)
...+......+.+++.+||+.||++|||+.+|++.|+++.....
T Consensus 404 --~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~ 447 (454)
T 1qcf_A 404 --MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATE 447 (454)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSC
T ss_pred --CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhccc
Confidence 01112234568899999999999999999999999999876543
No 128
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.3e-38 Score=351.69 Aligned_cols=252 Identities=24% Similarity=0.289 Sum_probs=185.8
Q ss_pred cCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhcC-CCceeeEEEEEEeCCeeEEEEEccCCCchH
Q 002061 681 DNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIR-HRNILKLYACLLKGGSSFLVLEYMPNGNLF 759 (973)
Q Consensus 681 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~e~~~~gsL~ 759 (973)
.+.||+|+||+||+|++..+++.||||++... ....+.+|+.+++.+. ||||+++++++.++...|+||||+++|+|.
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 94 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELF 94 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh-hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHH
Confidence 37899999999999999999999999998654 3456789999999997 999999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCC---CeEEecccCcccccCCCCcc
Q 002061 760 QALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY---EPKIADFGVAKIAENSPKVS 836 (973)
Q Consensus 760 ~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~---~~kl~Dfgl~~~~~~~~~~~ 836 (973)
+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++ .+||+|||+++.......
T Consensus 95 ~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~-- 164 (325)
T 3kn6_A 95 ERIKKK-----KHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ-- 164 (325)
T ss_dssp HHHHHC-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred HHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC--
Confidence 999753 45899999999999999999999 78999999999999998766 799999999986543322
Q ss_pred cccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCC--cccHHHHHHHHhccccccchhcccccc
Q 002061 837 DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGD--GKDIVYWVSTHLNNHENVLKVLDCEVA 914 (973)
Q Consensus 837 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (973)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ............... ....
T Consensus 165 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~--------~~~~ 236 (325)
T 3kn6_A 165 PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGD--------FSFE 236 (325)
T ss_dssp -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTC--------CCCC
T ss_pred cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCC--------CCCC
Confidence 223356899999999999999999999999999999999999999764221 112222222211111 0111
Q ss_pred CcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 915 SESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 915 ~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
..........+.+++.+|++.||.+|||+.|++++-.
T Consensus 237 ~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w 273 (325)
T 3kn6_A 237 GEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEW 273 (325)
T ss_dssp SHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGG
T ss_pred cccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChh
Confidence 1222344567889999999999999999999987644
No 129
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=7.7e-39 Score=347.76 Aligned_cols=262 Identities=25% Similarity=0.311 Sum_probs=198.9
Q ss_pred cCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEE
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
++|++.+.||+|+||+||+|++ .+++.||||++... ...+.+.+|++++++++||||+++++++..++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE 80 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence 5789999999999999999998 56889999998653 234678899999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccC
Q 002061 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|++ ++|.+++... ...+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 152 (288)
T 1ob3_A 81 HLD-QDLKKLLDVC----EGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGI 152 (288)
T ss_dssp CCS-EEHHHHHHTS----TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC
T ss_pred ecC-CCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCc
Confidence 996 5999988753 345889999999999999999999 78999999999999999999999999999976643
Q ss_pred CCCcccccccCCccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhcccc-----cc
Q 002061 832 SPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE-----NV 905 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~-----~~ 905 (973)
... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||.... ..+....+........ ..
T Consensus 153 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 228 (288)
T 1ob3_A 153 PVR--KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS--EADQLMRIFRILGTPNSKNWPNV 228 (288)
T ss_dssp -----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCTTTSTTG
T ss_pred ccc--ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHHCCCChhhchhh
Confidence 221 22334689999999998764 58999999999999999999999997531 1111111111111000 00
Q ss_pred ch--hcccccc-------CcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 906 LK--VLDCEVA-------SESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 906 ~~--~~~~~~~-------~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.+ ..++... ..........+.+++.+|++.||++|||+.|+++|-
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 282 (288)
T 1ob3_A 229 TELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHA 282 (288)
T ss_dssp GGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSG
T ss_pred hcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCc
Confidence 00 0000000 001112345678999999999999999999999763
No 130
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=5.5e-39 Score=356.80 Aligned_cols=262 Identities=27% Similarity=0.399 Sum_probs=210.2
Q ss_pred HcCCcccCcccccCceEEEEEEec-------CCCcEEEEEeeecc---ccHHHHHHHHHHHHhc-CCCceeeEEEEEEeC
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLK-------KNAGTVAVKQLWKG---DGVKVFAAEMEILGKI-RHRNILKLYACLLKG 743 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~-------~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~ 743 (973)
.++|++.+.||+|+||+||+|++. .+++.||||++... ...+.+.+|+++++++ +||||+++++++..+
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 357899999999999999999975 35678999998763 3446688999999999 899999999999999
Q ss_pred CeeEEEEEccCCCchHHHHHhhhcC-----------CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeee
Q 002061 744 GSSFLVLEYMPNGNLFQALHKRVKE-----------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL 812 (973)
Q Consensus 744 ~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill 812 (973)
+..|+||||+++|+|.+++...... ....+++..+..++.|+++||+||| +.+|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEEE
Confidence 9999999999999999999864211 1234889999999999999999999 7899999999999999
Q ss_pred cCCCCeEEecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccH
Q 002061 813 DEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDI 891 (973)
Q Consensus 813 ~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~ 891 (973)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |+.||... .....
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~--~~~~~ 268 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEEL 268 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHH
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC--CHHHH
Confidence 9999999999999987655443333344567889999999998889999999999999999999 99999653 11111
Q ss_pred HHHHHHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002061 892 VYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
...+... .. ..........+.+++.+||+.||.+||++.|++++|+++..
T Consensus 269 ~~~~~~~---~~-----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~ 318 (334)
T 2pvf_A 269 FKLLKEG---HR-----------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318 (334)
T ss_dssp HHHHHHT---CC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhcC---CC-----------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1111111 10 00111234568889999999999999999999999998753
No 131
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=4.3e-39 Score=349.89 Aligned_cols=257 Identities=26% Similarity=0.365 Sum_probs=213.3
Q ss_pred HHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEEc
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
...+|++.+.||+|+||+||+|.+..++..||||++... ...+.+.+|++++++++||||+++++++..+...++||||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 90 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 90 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEc
Confidence 346789999999999999999999998999999998764 3557789999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccCC
Q 002061 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
+++|+|.+++... ....+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||.+......
T Consensus 91 ~~~~~L~~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 164 (288)
T 3kfa_A 91 MTYGNLLDYLREC---NRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164 (288)
T ss_dssp CTTEEHHHHHHHC---CTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS
T ss_pred CCCCcHHHHHHhc---ccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccCC
Confidence 9999999999753 3456899999999999999999999 779999999999999999999999999999866543
Q ss_pred CCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccccchhccc
Q 002061 833 PKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDC 911 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
.. .......+|+.|+|||++.+..++.++||||+|+++|+|++ |..||... +.......+....
T Consensus 165 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~--~~~~~~~~~~~~~------------ 229 (288)
T 3kfa_A 165 TY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI--DLSQVYELLEKDY------------ 229 (288)
T ss_dssp SS-EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CGGGHHHHHHTTC------------
T ss_pred cc-ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHhccC------------
Confidence 22 22233456789999999998999999999999999999999 99999754 2222222221110
Q ss_pred cccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002061 912 EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 912 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
....+......+.+++.+|++.||.+||++.|+++.|+.+
T Consensus 230 --~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~ 269 (288)
T 3kfa_A 230 --RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269 (288)
T ss_dssp --CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --CCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence 0111122345688999999999999999999999999865
No 132
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=348.33 Aligned_cols=267 Identities=21% Similarity=0.211 Sum_probs=202.2
Q ss_pred HHHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc-------cHHHHHHHHHHHHhcC---CCceeeEEEEEE
Q 002061 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-------GVKVFAAEMEILGKIR---HRNILKLYACLL 741 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~---hpniv~l~~~~~ 741 (973)
....++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+|++++++++ ||||+++++++.
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~ 84 (308)
T 3g33_A 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCA 84 (308)
T ss_dssp -----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred cccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeee
Confidence 445679999999999999999999999999999999986421 2346678888877764 999999999998
Q ss_pred eCC-----eeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCC
Q 002061 742 KGG-----SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY 816 (973)
Q Consensus 742 ~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~ 816 (973)
... ..++||||++ |+|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||+++.++
T Consensus 85 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~ 157 (308)
T 3g33_A 85 TSRTDREIKVTLVFEHVD-QDLRTYLDKA---PPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGG 157 (308)
T ss_dssp ECCSSSEEEEEEEEECCC-CBHHHHHHTC---CTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTS
T ss_pred ccCCCCceeEEEEehhhh-cCHHHHHhhc---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCC
Confidence 755 5799999996 6999999753 2334899999999999999999999 78999999999999999999
Q ss_pred CeEEecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHH
Q 002061 817 EPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVS 896 (973)
Q Consensus 817 ~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~ 896 (973)
.+||+|||+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..+....+.
T Consensus 158 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~i~ 232 (308)
T 3g33_A 158 TVKLADFGLARIYSYQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS--EADQLGKIF 232 (308)
T ss_dssp CEEECSCSCTTTSTTCC---CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSS--HHHHHHHHH
T ss_pred CEEEeeCccccccCCCc---ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHH
Confidence 99999999998664332 2234568999999999999999999999999999999999999996541 111111111
Q ss_pred HHhccccc--cchh---ccccc---c----CcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 897 THLNNHEN--VLKV---LDCEV---A----SESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 897 ~~~~~~~~--~~~~---~~~~~---~----~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
........ .... ..... . .....+....+.+++.+|+++||++|||+.|+++|-
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~ 298 (308)
T 3g33_A 233 DLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHS 298 (308)
T ss_dssp HHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTST
T ss_pred HHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCc
Confidence 11111000 0000 00000 0 001112345688999999999999999999999864
No 133
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.5e-38 Score=342.09 Aligned_cols=249 Identities=30% Similarity=0.402 Sum_probs=204.6
Q ss_pred HHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEE
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
.+++|++.+.||+|+||+||+|++..+++.||||++... .....+.+|++++++++||||+++++++.+++..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 456889999999999999999999999999999998652 235568899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccc
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++... ..+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|+|||++..
T Consensus 87 v~e~~~~~~l~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~ 158 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH 158 (279)
T ss_dssp EECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESC
T ss_pred EEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEecccccc
Confidence 99999999999999764 34889999999999999999999 88999999999999999999999999998865
Q ss_pred ccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchh
Q 002061 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
.... ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||... ...............
T Consensus 159 ~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-----~~~~~~~~~~~~~~~---- 225 (279)
T 3fdn_A 159 APSS----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEFT---- 225 (279)
T ss_dssp C------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHHTCCC----
T ss_pred CCcc----cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCC-----cHHHHHHHHHhCCCC----
Confidence 4332 123356899999999999999999999999999999999999999653 111111111111110
Q ss_pred ccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
. +......+.+++.+|++.||++||++.|+++|-.
T Consensus 226 ----~----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~ 260 (279)
T 3fdn_A 226 ----F----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 260 (279)
T ss_dssp ----C----CTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHH
T ss_pred ----C----CCcCCHHHHHHHHHHhccChhhCCCHHHHhhCcc
Confidence 0 1112345778999999999999999999998765
No 134
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.1e-38 Score=344.48 Aligned_cols=255 Identities=26% Similarity=0.357 Sum_probs=208.5
Q ss_pred HHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEE
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
..++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|+++++.++||||+++++++.+++..|+||
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 456899999999999999999999988999999998653 33567889999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccccc
Q 002061 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++++|.+++.. ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||.+....
T Consensus 85 e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 156 (276)
T 2yex_A 85 EYCSGGELFDRIEP-----DIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (276)
T ss_dssp ECCTTEEGGGGSBT-----TTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EecCCCcHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccC
Confidence 99999999988753 245889999999999999999999 7899999999999999999999999999998664
Q ss_pred CCCCcccccccCCccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhc
Q 002061 831 NSPKVSDYSCFAGTHGYIAPELAYTCKV-SEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
............|++.|+|||++.+..+ +.++||||+|+++|||++|+.||............+.. .....
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----~~~~~---- 228 (276)
T 2yex_A 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE----KKTYL---- 228 (276)
T ss_dssp ETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHT----TCTTS----
T ss_pred CCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhh----ccccc----
Confidence 4332223344578999999999987765 67899999999999999999999765332222222211 11000
Q ss_pred cccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.........+.+++.+|++.||++|||+.|++++-
T Consensus 229 ------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 263 (276)
T 2yex_A 229 ------NPWKKIDSAPLALLHKILVENPSARITIPDIKKDR 263 (276)
T ss_dssp ------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCT
T ss_pred ------CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCc
Confidence 01112344678899999999999999999998864
No 135
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2.9e-38 Score=342.62 Aligned_cols=252 Identities=25% Similarity=0.311 Sum_probs=206.0
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
.++|++.+.||+|+||+||+|.+..+++.||+|++... ...+.+.+|++++++++||||+++++++..+...++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 46899999999999999999999999999999998653 23466789999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCC---eEEecccCcc
Q 002061 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE---PKIADFGVAK 827 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~---~kl~Dfgl~~ 827 (973)
||+++|+|.+++... ..+++..+..++.|++.|++||| +.+++||||||+||+++.++. +||+|||.+.
T Consensus 85 e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~ 156 (284)
T 3kk8_A 85 DLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156 (284)
T ss_dssp CCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred ecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence 999999999998764 35889999999999999999999 789999999999999987655 9999999997
Q ss_pred cccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccch
Q 002061 828 IAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
....... .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... . ..............
T Consensus 157 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~--~---~~~~~~~~~~~~~~-- 226 (284)
T 3kk8_A 157 EVNDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED--Q---HRLYAQIKAGAYDY-- 226 (284)
T ss_dssp ECCSSCB---CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--H---HHHHHHHHHTCCCC--
T ss_pred EcccCcc---ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCc--h---hHHHHHHHhccccC--
Confidence 6654322 233568999999999999999999999999999999999999996531 1 11111111111000
Q ss_pred hccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
...........+.+++.+|++.||++|||+.|++++-
T Consensus 227 ------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~ 263 (284)
T 3kk8_A 227 ------PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVP 263 (284)
T ss_dssp ------CTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSH
T ss_pred ------CchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCc
Confidence 0011112335678999999999999999999999863
No 136
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=361.85 Aligned_cols=271 Identities=23% Similarity=0.292 Sum_probs=213.0
Q ss_pred cCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCC--eeEEEE
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGG--SSFLVL 750 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--~~~lv~ 750 (973)
.+|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++.... ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 5788999999999999999999999999999998752 34567889999999999999999999998755 789999
Q ss_pred EccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeee----cCCCCeEEecccCc
Q 002061 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL----DEDYEPKIADFGVA 826 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill----~~~~~~kl~Dfgl~ 826 (973)
||+++|+|.+++.... ....+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||++
T Consensus 89 e~~~~g~L~~~l~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a 163 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPS--NAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (396)
T ss_dssp CCCTTEEHHHHTTSGG--GTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred ecCCCCCHHHHHHhhh--cccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence 9999999999997642 1223899999999999999999999 7899999999999999 77778999999999
Q ss_pred ccccCCCCcccccccCCcccccccccccc--------CCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHH
Q 002061 827 KIAENSPKVSDYSCFAGTHGYIAPELAYT--------CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTH 898 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~ 898 (973)
+...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||............+....
T Consensus 164 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~ 240 (396)
T 4eut_A 164 RELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240 (396)
T ss_dssp EECCCGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHH
T ss_pred eEccCCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHh
Confidence 8664332 2234568999999999865 5678899999999999999999999976533322222222111
Q ss_pred hccccccc----hhc--------cccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002061 899 LNNHENVL----KVL--------DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 899 ~~~~~~~~----~~~--------~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
........ ... +..............+.+++.+|+++||++||++.|++++++++.
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il 308 (396)
T 4eut_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (396)
T ss_dssp HSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHH
T ss_pred cCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHh
Confidence 11111000 000 001111223566778889999999999999999999999998764
No 137
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.1e-38 Score=372.05 Aligned_cols=254 Identities=24% Similarity=0.282 Sum_probs=209.2
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
.++|++.+.||+|+||+||+|++..+|+.||||++.+. .....+.+|++++++++||||+++++++.+++..|+|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 45788999999999999999999999999999998652 3456688999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccc
Q 002061 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++|+|.+++... ....+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 263 mEy~~gg~L~~~l~~~---~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~ 336 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHM---GQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHV 336 (576)
T ss_dssp ECCCCSCBHHHHHHSS---SSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEcCCCCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceec
Confidence 9999999999999753 2345899999999999999999999 789999999999999999999999999999876
Q ss_pred cCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhc
Q 002061 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||....... ...............
T Consensus 337 ~~~~~---~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~-~~~~i~~~i~~~~~~----- 407 (576)
T 2acx_A 337 PEGQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KREEVERLVKEVPEE----- 407 (576)
T ss_dssp CTTCC---EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC-CHHHHHHHHHHCCCC-----
T ss_pred ccCcc---ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch-hHHHHHHHhhccccc-----
Confidence 54322 233579999999999999899999999999999999999999997642211 111111111111110
Q ss_pred cccccCcchHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHh
Q 002061 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRP-----PMREVVKML 950 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~L 950 (973)
.+......+.+++.+|++.||.+|| ++.|+++|-
T Consensus 408 -------~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~Hp 446 (576)
T 2acx_A 408 -------YSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHP 446 (576)
T ss_dssp -------CCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSG
T ss_pred -------CCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhCh
Confidence 1112345678899999999999999 789998763
No 138
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=359.17 Aligned_cols=257 Identities=22% Similarity=0.209 Sum_probs=205.7
Q ss_pred HHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEE
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
..++|++.+.||+|+||+||+|+++.+++.||||++.+. ...+.+.+|..++..++||||+++++++.+++..|+
T Consensus 59 ~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~l 138 (412)
T 2vd5_A 59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYL 138 (412)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEE
T ss_pred ChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 356899999999999999999999999999999998752 233457899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccc
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++.+. ...+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++.
T Consensus 139 VmE~~~gg~L~~~l~~~----~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFGla~~ 211 (412)
T 2vd5_A 139 VMEYYVGGDLLTLLSKF----GERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSCLK 211 (412)
T ss_dssp EECCCCSCBHHHHHHHH----SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEcCCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeechhhee
Confidence 99999999999999864 235889999999999999999999 78999999999999999999999999999987
Q ss_pred ccCCCCcccccccCCccccccccccc-------cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhcc
Q 002061 829 AENSPKVSDYSCFAGTHGYIAPELAY-------TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNN 901 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 901 (973)
...... .......||+.|+|||++. +..++.++|||||||++|||++|+.||... +...........
T Consensus 212 ~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~-----~~~~~~~~i~~~ 285 (412)
T 2vd5_A 212 LRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD-----STAETYGKIVHY 285 (412)
T ss_dssp CCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHTH
T ss_pred ccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCC-----CHHHHHHHHHhc
Confidence 654322 1223357999999999987 456899999999999999999999999653 111111111110
Q ss_pred ccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCC---CCHHHHHHHhh
Q 002061 902 HENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLR---PPMREVVKMLA 951 (973)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R---pt~~evl~~L~ 951 (973)
... ...+ ........++.+++.+|+. +|.+| |++.|+++|-.
T Consensus 286 ~~~---~~~p----~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpf 330 (412)
T 2vd5_A 286 KEH---LSLP----LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPF 330 (412)
T ss_dssp HHH---CCCC--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGG
T ss_pred ccC---cCCC----ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCC
Confidence 000 0000 0112234568889999999 99998 69999998743
No 139
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=7.3e-39 Score=353.26 Aligned_cols=267 Identities=23% Similarity=0.319 Sum_probs=210.1
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeec--cccHHHHHHHHHHHHhcCCCceeeEEEEEEe----CCeeEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK--GDGVKVFAAEMEILGKIRHRNILKLYACLLK----GGSSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~----~~~~~l 748 (973)
.++|++.+.||+|+||.||+|++..+++.||||++.. ....+.+.+|++++++++||||+++++++.. ....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 4579999999999999999999998899999998865 3445678899999999999999999999863 347899
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccc
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++.... .....+++..+..++.|+++||+||| +.+++||||||+||+++.++.+||+|||.+..
T Consensus 108 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLK-DKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEECCTTCBHHHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEeCCCCcHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 999999999999998642 23456899999999999999999999 78999999999999999999999999999875
Q ss_pred ccCCCCc-------ccccccCCccccccccccccCC---CCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHH
Q 002061 829 AENSPKV-------SDYSCFAGTHGYIAPELAYTCK---VSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTH 898 (973)
Q Consensus 829 ~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~ 898 (973)
....... .......||+.|+|||++.+.. ++.++||||||+++|||++|+.||.................
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~ 263 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQ 263 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhcc
Confidence 4321110 0112245799999999987554 68899999999999999999999965322222222222110
Q ss_pred hccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCCCC
Q 002061 899 LNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCTDK 959 (973)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~ 959 (973)
.. ..........+.+++.+||+.||.+||++.|++++|+.+.+....
T Consensus 264 ~~--------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~ 310 (317)
T 2buj_A 264 LS--------------IPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPG 310 (317)
T ss_dssp ----------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC
T ss_pred CC--------------CCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCC
Confidence 00 000112235688999999999999999999999999999865543
No 140
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=5.2e-39 Score=347.79 Aligned_cols=255 Identities=25% Similarity=0.297 Sum_probs=195.6
Q ss_pred HcCCcccCcccccCceEEEEEEecCC---CcEEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKN---AGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~---~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
.++|++.+.||+|+||+||+|++..+ +..||||+.... ...+.+.+|+.++++++||||+++++++. ++..|+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 46789999999999999999998643 457999987653 33456889999999999999999999874 567899
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccc
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++... ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||+++.
T Consensus 93 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp EEECCTTEEHHHHHHHT----TTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC------
T ss_pred EEecCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccc
Confidence 99999999999999753 335889999999999999999999 78999999999999999999999999999987
Q ss_pred ccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccccch
Q 002061 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
...... .......+++.|+|||++.+..++.++||||||+++|||++ |..||.... ..+....+... ..
T Consensus 166 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~--~~~~~~~i~~~---~~---- 235 (281)
T 1mp8_A 166 MEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK--NNDVIGRIENG---ER---- 235 (281)
T ss_dssp --------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCC--GGGHHHHHHTT---CC----
T ss_pred cCcccc-cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCC--HHHHHHHHHcC---CC----
Confidence 654322 12223456789999999998899999999999999999997 999997542 22222222111 00
Q ss_pred hccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002061 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
...+......+.+++.+|++.||++||++.|++++|+++.
T Consensus 236 -------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 236 -------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 0011223456888999999999999999999999998753
No 141
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=357.78 Aligned_cols=248 Identities=23% Similarity=0.312 Sum_probs=198.3
Q ss_pred ccCcccccCceEEEEEEecCCCcEEEEEeeecc--ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEEccCCCc
Q 002061 680 EDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNGN 757 (973)
Q Consensus 680 ~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gs 757 (973)
..+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++..++..++||||+++|+
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 356899999999999999999999999998763 355678999999999999999999999999999999999999999
Q ss_pred hHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeee--cCCCCeEEecccCcccccCCCCc
Q 002061 758 LFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL--DEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 758 L~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill--~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++.......
T Consensus 173 L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~- 244 (373)
T 2x4f_A 173 LFDRIIDE----SYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK- 244 (373)
T ss_dssp EHHHHHHT----GGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB-
T ss_pred HHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc-
Confidence 99998753 235889999999999999999999 7899999999999999 5678899999999987654322
Q ss_pred ccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhccccccC
Q 002061 836 SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVAS 915 (973)
Q Consensus 836 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.... .............. ...
T Consensus 245 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~-----~~~~~~~i~~~~~~--------~~~ 309 (373)
T 2x4f_A 245 --LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN-----DAETLNNILACRWD--------LED 309 (373)
T ss_dssp --CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHHTCCC--------SCS
T ss_pred --cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhccCC--------CCh
Confidence 223468999999999998899999999999999999999999996531 11121211111110 011
Q ss_pred cchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 916 ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 916 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.........+.+++.+|++.||.+||++.|++++-
T Consensus 310 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp 344 (373)
T 2x4f_A 310 EEFQDISEEAKEFISKLLIKEKSWRISASEALKHP 344 (373)
T ss_dssp GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred hhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 11123345688999999999999999999999853
No 142
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=3.1e-38 Score=341.00 Aligned_cols=250 Identities=23% Similarity=0.270 Sum_probs=205.5
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeec--cccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEEc
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK--GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
.++|++.+.||+|+||+||+|++..++..||+|++.. ....+.+.+|++++++++||||+++++++..++..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 4578999999999999999999999999999999876 34567889999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeee---cCCCCeEEecccCcccc
Q 002061 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL---DEDYEPKIADFGVAKIA 829 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfgl~~~~ 829 (973)
+++++|.+++... ..+++..+..++.|++.|++||| +++++||||||+||++ +.++.+||+|||++...
T Consensus 88 ~~~~~L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 88 CTGGELFERVVHK-----RVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp CCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred cCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 9999999998764 34889999999999999999999 7899999999999999 77889999999999866
Q ss_pred cCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhc
Q 002061 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
.... ......||+.|+|||++.+. ++.++||||+|+++|||++|+.||.... ...............
T Consensus 160 ~~~~---~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~---- 226 (277)
T 3f3z_A 160 KPGK---MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPT-----DSEVMLKIREGTFTF---- 226 (277)
T ss_dssp CTTS---CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCCC----
T ss_pred cCcc---chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhCCCCC----
Confidence 5432 22335689999999998654 8999999999999999999999996531 111111111111100
Q ss_pred cccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
...........+.+++.+|++.||++||++.|++++
T Consensus 227 ----~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 227 ----PEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp ----CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ----CchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 001111234568899999999999999999999875
No 143
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.3e-38 Score=349.93 Aligned_cols=254 Identities=24% Similarity=0.324 Sum_probs=195.3
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCC----e
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGG----S 745 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----~ 745 (973)
.++|++.+.||+|+||+||+|++..+++.||||++... .....+.+|++++++++||||+++++++.... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46899999999999999999999999999999998653 22356889999999999999999999987654 3
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccC
Q 002061 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
.|+||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 162 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGI 162 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSC
T ss_pred cEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccC
Confidence 49999999999999999764 35889999999999999999999 78999999999999999999999999999
Q ss_pred cccccCCCCc-ccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccc
Q 002061 826 AKIAENSPKV-SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 826 ~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..............
T Consensus 163 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~-----~~~~~~~~~~~~~~ 237 (311)
T 3ork_A 163 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS-----PVSVAYQHVREDPI 237 (311)
T ss_dssp C------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHCCCC
T ss_pred cccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHhcCCCC
Confidence 9866543221 22233568999999999999999999999999999999999999996531 11121111111111
Q ss_pred cchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
... .........+.+++.+||+.||++||++.+++++
T Consensus 238 ~~~--------~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~ 274 (311)
T 3ork_A 238 PPS--------ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 274 (311)
T ss_dssp CHH--------HHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred Ccc--------cccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHH
Confidence 000 0011234568899999999999999977666544
No 144
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2.6e-39 Score=354.28 Aligned_cols=262 Identities=26% Similarity=0.324 Sum_probs=207.7
Q ss_pred HcCCcccCcccccCceEEEEEE----ecCCCcEEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEeC--Ce
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLD----LKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKG--GS 745 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~----~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~ 745 (973)
..+|++.+.||+|+||+||+|+ ...+++.||||++... ...+.+.+|++++++++||||+++++++... ..
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 3468899999999999999999 4567899999998753 3457789999999999999999999999876 66
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccC
Q 002061 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
.++||||+++|+|.+++... ...+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~ 172 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKN----KNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGL 172 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHH----TTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred EEEEEEeCCCCcHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECcccc
Confidence 89999999999999999754 245899999999999999999999 78999999999999999999999999999
Q ss_pred cccccCCCCc-ccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccC---------CcccHHHHH
Q 002061 826 AKIAENSPKV-SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYG---------DGKDIVYWV 895 (973)
Q Consensus 826 ~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~---------~~~~~~~~~ 895 (973)
+......... .......||..|+|||++.+..++.++||||+|+++|||++|..|+..... .........
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 252 (302)
T 4e5w_A 173 TKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRL 252 (302)
T ss_dssp CEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHH
T ss_pred cccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHH
Confidence 9877544322 222345678899999999998999999999999999999999998754310 001111111
Q ss_pred HHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002061 896 STHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
....... .....+......+.+++.+||+.||.+|||+.|+++.|+.+
T Consensus 253 ~~~~~~~----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 253 VNTLKEG----------KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp HHHHHTT----------CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHhcc----------CCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 1111110 11111223345688999999999999999999999999864
No 145
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=4.6e-39 Score=349.85 Aligned_cols=257 Identities=19% Similarity=0.275 Sum_probs=202.1
Q ss_pred HcCCcccCcccccCceEEEEEEecCCC-------cEEEEEeeec--cccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCe
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNA-------GTVAVKQLWK--GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGS 745 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~-------~~vavK~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 745 (973)
.++|++.+.||+|+||+||+|++..++ ..||+|++.. ....+.+.+|++++++++||||+++++++..++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 457889999999999999999998766 4699998865 3455778999999999999999999999999999
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCC--------
Q 002061 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE-------- 817 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~-------- 817 (973)
.++||||+++|+|.+++... ...+++..+..++.|++.||+||| +++|+||||||+||+++.++.
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKN----KNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHT----GGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred CEEEEECCCCCCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccce
Confidence 99999999999999999864 234889999999999999999999 789999999999999998887
Q ss_pred eEEecccCcccccCCCCcccccccCCcccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHH
Q 002061 818 PKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVS 896 (973)
Q Consensus 818 ~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~ 896 (973)
+||+|||.+...... ....||+.|+|||++.+ ..++.++||||+||++|||++|..|+.... +......
T Consensus 160 ~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~----~~~~~~~ 229 (289)
T 4fvq_A 160 IKLSDPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL----DSQRKLQ 229 (289)
T ss_dssp EEECCCCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS----CHHHHHH
T ss_pred eeeccCcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc----chHHHHH
Confidence 999999998654321 22357889999999987 678999999999999999999654443221 1111111
Q ss_pred HHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCCCCCC
Q 002061 897 THLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCTDKSP 961 (973)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~~ 961 (973)
... ...... . .....+.+++.+||+.||++|||+.|++++|+++..+....+
T Consensus 230 ~~~-~~~~~~----~--------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~~~ 281 (289)
T 4fvq_A 230 FYE-DRHQLP----A--------PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPR 281 (289)
T ss_dssp HHH-TTCCCC----C--------CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-------
T ss_pred Hhh-ccCCCC----C--------CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCCCC
Confidence 111 111000 0 012347789999999999999999999999999987554433
No 146
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=7.7e-39 Score=369.83 Aligned_cols=261 Identities=28% Similarity=0.407 Sum_probs=205.5
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEEcc
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.++|++.+.||+|+||+||+|.+.. +..||||++... ...+.+.+|++++++++||||+++++++.+ +..|+||||+
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~ 260 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 260 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhh
Confidence 3567888999999999999999986 567999998763 356789999999999999999999999876 6789999999
Q ss_pred CCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccCCC
Q 002061 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++|+|.+++.... ...+++..+..++.|+++||+||| +++++||||||+||+++.++.+||+|||+++......
T Consensus 261 ~~gsL~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 334 (452)
T 1fmk_A 261 SKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334 (452)
T ss_dssp TTCBHHHHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred cCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCc
Confidence 9999999997531 234789999999999999999999 7899999999999999999999999999998664332
Q ss_pred CcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccccchhcccc
Q 002061 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
. .......++..|+|||++.+..++.++|||||||++|||++ |+.||.... .......+. ...
T Consensus 335 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~--~~~~~~~i~----~~~--------- 398 (452)
T 1fmk_A 335 Y-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV--NREVLDQVE----RGY--------- 398 (452)
T ss_dssp ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC--HHHHHHHHH----TTC---------
T ss_pred e-ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCC--HHHHHHHHH----cCC---------
Confidence 1 12223456789999999998999999999999999999999 999996531 111111111 110
Q ss_pred ccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCCCCC
Q 002061 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCTDKS 960 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~ 960 (973)
....+......+.+++.+||+.||++|||+.++++.|+++.....+.
T Consensus 399 -~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~~ 445 (452)
T 1fmk_A 399 -RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 445 (452)
T ss_dssp -CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCC
T ss_pred -CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCcc
Confidence 00111233456889999999999999999999999999987655443
No 147
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.2e-38 Score=354.90 Aligned_cols=248 Identities=29% Similarity=0.402 Sum_probs=201.9
Q ss_pred cCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEE
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
..|+..+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++..++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4588889999999999999999988999999998642 23456889999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccccc
Q 002061 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||++ |++.+++... ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 134 e~~~-g~l~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 205 (348)
T 1u5q_A 134 EYCL-GSASDLLEVH----KKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205 (348)
T ss_dssp ECCS-EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred ecCC-CCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence 9996 7888888653 345899999999999999999999 7899999999999999999999999999997654
Q ss_pred CCCCcccccccCCccccccccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccch
Q 002061 831 NSPKVSDYSCFAGTHGYIAPELAY---TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
.. ....||+.|+|||++. +..++.++|||||||++|||++|+.||.... .............
T Consensus 206 ~~------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~-----~~~~~~~~~~~~~---- 270 (348)
T 1u5q_A 206 PA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-----AMSALYHIAQNES---- 270 (348)
T ss_dssp SB------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSCC----
T ss_pred CC------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHhcCC----
Confidence 32 2356899999999984 5678999999999999999999999996531 1111111111111
Q ss_pred hccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002061 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
+.. ........+.+++.+||+.||++|||+.+++++..-
T Consensus 271 ---~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~ 309 (348)
T 1u5q_A 271 ---PAL---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 309 (348)
T ss_dssp ---CCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHH
T ss_pred ---CCC---CCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhh
Confidence 000 011223457889999999999999999999987553
No 148
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=9e-39 Score=344.01 Aligned_cols=251 Identities=22% Similarity=0.277 Sum_probs=202.7
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeC--CeeEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKG--GSSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~l 748 (973)
.++|++.+.||+|+||+||+|++. ++.||||++... ...+.+.+|++++++++||||+++++++..+ ...++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 467899999999999999999986 789999998753 3345788999999999999999999999876 78899
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCC--eEecCCCCCCeeecCCCCeEEecccCc
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPP--IIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
||||+++|+|.+++... ....+++..+..++.|++.||+||| +.+ ++||||||+||+++.++.++++|||++
T Consensus 87 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~ 160 (271)
T 3kmu_A 87 ITHWMPYGSLYNVLHEG---TNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVK 160 (271)
T ss_dssp EEECCTTCBHHHHHHSC---SSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSC
T ss_pred eecccCCCcHHHHHhhc---ccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccce
Confidence 99999999999999753 2335899999999999999999999 677 999999999999999999999999887
Q ss_pred ccccCCCCcccccccCCccccccccccccCCCCc---cchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhcccc
Q 002061 827 KIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSE---KSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE 903 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 903 (973)
..... ....||+.|+|||++.+..++. ++|||||||++|||++|+.||.... .............
T Consensus 161 ~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~~~ 228 (271)
T 3kmu_A 161 FSFQS-------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLS-----NMEIGMKVALEGL 228 (271)
T ss_dssp CTTSC-------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSC-----HHHHHHHHHHSCC
T ss_pred eeecc-------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccC-----hHHHHHHHHhcCC
Confidence 54322 2246799999999998765544 7999999999999999999996531 1111111111110
Q ss_pred ccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002061 904 NVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
....+......+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 229 ----------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 229 ----------RPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp ----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred ----------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 001112234568899999999999999999999999987653
No 149
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=3e-38 Score=348.83 Aligned_cols=253 Identities=22% Similarity=0.270 Sum_probs=208.3
Q ss_pred HHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc--------cHHHHHHHHHHHHhcCCCceeeEEEEEEeCCe
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD--------GVKVFAAEMEILGKIRHRNILKLYACLLKGGS 745 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 745 (973)
..++|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++..+..
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 89 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD 89 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 3567899999999999999999999999999999986532 35678999999999999999999999999999
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCC----CeEEe
Q 002061 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY----EPKIA 821 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~----~~kl~ 821 (973)
.++||||+++++|.+++... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++ .+||+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~ 161 (321)
T 2a2a_A 90 VVLILELVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLI 161 (321)
T ss_dssp EEEEECCCCSCBHHHHHHTC-----SCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred EEEEEEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEc
Confidence 99999999999999999742 35889999999999999999999 78999999999999999888 79999
Q ss_pred cccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhcc
Q 002061 822 DFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNN 901 (973)
Q Consensus 822 Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 901 (973)
|||++........ .....||+.|+|||++.+..++.++|||||||++|+|++|+.||... ............
T Consensus 162 Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-----~~~~~~~~i~~~ 233 (321)
T 2a2a_A 162 DFGLAHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD-----TKQETLANITSV 233 (321)
T ss_dssp CCTTCEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS-----SHHHHHHHHHTT
T ss_pred cCccceecCcccc---ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHhc
Confidence 9999987654322 23356899999999999999999999999999999999999999653 111121111111
Q ss_pred ccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 902 HENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
... ............+.+++.+|++.||++|||+.|++++-
T Consensus 234 ~~~--------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp 274 (321)
T 2a2a_A 234 SYD--------FDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHP 274 (321)
T ss_dssp CCC--------CCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHST
T ss_pred ccc--------cChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence 110 00111122345688999999999999999999999864
No 150
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.1e-38 Score=365.35 Aligned_cols=248 Identities=25% Similarity=0.364 Sum_probs=206.4
Q ss_pred HHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEE
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
..++|++.+.||+|+||+||+|++..+|+.||||++... ...+.+.+|+++++.++||||+++++++..++..|+
T Consensus 14 ~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~l 93 (476)
T 2y94_A 14 KIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFM 93 (476)
T ss_dssp EETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred eecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 356899999999999999999999999999999998653 235678899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccc
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++..
T Consensus 94 v~E~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~ 165 (476)
T 2y94_A 94 VMEYVSGGELFDYICK-----NGRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNM 165 (476)
T ss_dssp EEECCSSEEHHHHTTS-----SSSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred EEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhh
Confidence 9999999999999864 245899999999999999999999 88999999999999999999999999999987
Q ss_pred ccCCCCcccccccCCccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccch
Q 002061 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKV-SEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
...... .....||+.|+|||++.+..+ +.++||||+||++|||++|+.||.... .. ............
T Consensus 166 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~--~~---~~~~~i~~~~~~--- 234 (476)
T 2y94_A 166 MSDGEF---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH--VP---TLFKKICDGIFY--- 234 (476)
T ss_dssp CCTTCC---BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS--SH---HHHHHHHTTCCC---
T ss_pred cccccc---ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC--HH---HHHHHHhcCCcC---
Confidence 654322 233569999999999988766 689999999999999999999997541 11 111111111100
Q ss_pred hccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.+......+.+++.+|++.||.+|||+.|+++|
T Consensus 235 ---------~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 235 ---------TPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp ---------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ---------CCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 011123457889999999999999999999985
No 151
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=6.3e-39 Score=354.63 Aligned_cols=264 Identities=21% Similarity=0.294 Sum_probs=212.3
Q ss_pred HHHcCCcccCcccccCceEEEEEEec-----CCCcEEEEEeeeccc---cHHHHHHHHHHHHhcCCCceeeEEEEEEeCC
Q 002061 673 EQICNLEEDNLIGSGGTGKVYRLDLK-----KNAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGG 744 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~V~~a~~~-----~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 744 (973)
...++|++.+.||+|+||+||+|++. .+++.||||++.... ....+.+|++++++++||||+++++++..++
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 101 (322)
T 1p4o_A 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 101 (322)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS
T ss_pred chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCC
Confidence 34568999999999999999999886 357789999987532 3456889999999999999999999999999
Q ss_pred eeEEEEEccCCCchHHHHHhhhc-----CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeE
Q 002061 745 SSFLVLEYMPNGNLFQALHKRVK-----EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPK 819 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~-----~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 819 (973)
..++||||+++|+|.+++..... .....+++..+..++.|++.||+||| +++|+||||||+||+++.++.+|
T Consensus 102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~~~~k 178 (322)
T 1p4o_A 102 PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVK 178 (322)
T ss_dssp SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTCCEE
T ss_pred ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCCCeEE
Confidence 99999999999999999976421 11245689999999999999999999 78999999999999999999999
Q ss_pred EecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHH
Q 002061 820 IADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTH 898 (973)
Q Consensus 820 l~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~ 898 (973)
|+|||+++...............+|+.|+|||++.+..++.++||||+|+++|||++ |+.||... .........
T Consensus 179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-----~~~~~~~~~ 253 (322)
T 1p4o_A 179 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL-----SNEQVLRFV 253 (322)
T ss_dssp ECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-----CHHHHHHHH
T ss_pred ECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC-----CHHHHHHHH
Confidence 999999986654333233334457889999999999899999999999999999999 89999653 111111111
Q ss_pred hccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002061 899 LNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
..... ..........+.+++.+||+.||++||++.|++++|++...
T Consensus 254 ~~~~~-----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 254 MEGGL-----------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp HTTCC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred HcCCc-----------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 11100 00111234568889999999999999999999999998754
No 152
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3.3e-38 Score=342.17 Aligned_cols=254 Identities=24% Similarity=0.307 Sum_probs=200.9
Q ss_pred HHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEE
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
..++|++.+.||+|+||+||+|++..++..||+|++... ...+.+.+|++++++++||||+++++++......++||
T Consensus 20 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 99 (285)
T 3is5_A 20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM 99 (285)
T ss_dssp HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence 346789999999999999999999999999999998763 34578899999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeee---cCCCCeEEecccCcc
Q 002061 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL---DEDYEPKIADFGVAK 827 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfgl~~ 827 (973)
||+++|+|.+++..... ....+++..+..++.|+++||+||| +.+|+||||||+||++ +.++.+||+|||++.
T Consensus 100 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 100 ETCEGGELLERIVSAQA-RGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp CCCSCCBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred EeCCCCcHHHHHHhhhh-cccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 99999999999975422 2346899999999999999999999 7899999999999999 456789999999997
Q ss_pred cccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccch
Q 002061 828 IAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
...... ......||+.|+|||++. ..++.++||||+|+++|||++|+.||.... ................
T Consensus 176 ~~~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~-----~~~~~~~~~~~~~~~~- 245 (285)
T 3is5_A 176 LFKSDE---HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS-----LEEVQQKATYKEPNYA- 245 (285)
T ss_dssp C-------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCCCC-
T ss_pred ecCCcc---cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCC-----HHHHHhhhccCCcccc-
Confidence 654432 123356899999999875 568999999999999999999999996531 1111111111111000
Q ss_pred hccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
. ........+.+++.+|++.||++|||+.|++++
T Consensus 246 ---~-----~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 246 ---V-----ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp ---C-------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred ---c-----ccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 000123457789999999999999999999975
No 153
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=8.2e-39 Score=347.72 Aligned_cols=260 Identities=28% Similarity=0.432 Sum_probs=194.7
Q ss_pred HHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEE
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
..++|++.+.||+|+||+||+|++.. .||||++... ...+.+.+|++++++++||||+++++++ .....++|
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv 97 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIV 97 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEE
T ss_pred CccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEE
Confidence 34679999999999999999998753 5999988642 3446788999999999999999999964 55678999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccc
Q 002061 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++++|.+++... ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++...
T Consensus 98 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 170 (289)
T 3og7_A 98 TQWCEGSSLYHHLHAS----ETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEK 170 (289)
T ss_dssp EECCCEEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC-----
T ss_pred EEecCCCcHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceecccc
Confidence 9999999999998643 345899999999999999999999 789999999999999999999999999999766
Q ss_pred cCCCCcccccccCCccccccccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccc
Q 002061 830 ENSPKVSDYSCFAGTHGYIAPELAY---TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
.............||+.|+|||++. +..++.++||||+|+++|||++|+.||..... .......+..... ....
T Consensus 171 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-~~~~~~~~~~~~~-~~~~- 247 (289)
T 3og7_A 171 SRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN-RDQIIEMVGRGSL-SPDL- 247 (289)
T ss_dssp -------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCC-HHHHHHHHHHTSC-CCCT-
T ss_pred ccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccch-HHHHHHHhccccc-Ccch-
Confidence 5433333334457899999999986 66788899999999999999999999975421 1111222111110 0000
Q ss_pred hhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002061 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
..........+.+++.+||+.||++||++.|+++.|+++..
T Consensus 248 --------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 248 --------SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp --------TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred --------hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 01112234568899999999999999999999999998753
No 154
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.7e-38 Score=354.80 Aligned_cols=263 Identities=23% Similarity=0.225 Sum_probs=204.7
Q ss_pred HHHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-------ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCC
Q 002061 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-------DGVKVFAAEMEILGKIRHRNILKLYACLLKGG 744 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-------~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 744 (973)
....++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++.+++
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 45567899999999999999999999999999999988642 34567899999999999999999999999999
Q ss_pred eeEEEEEccCCCchHHHHHhhhcCC-----------------------------------CCCCCHHHHHHHHHHHHHHH
Q 002061 745 SSFLVLEYMPNGNLFQALHKRVKEG-----------------------------------KPELDWFRRYKIALGAAKGI 789 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~-----------------------------------~~~~~~~~~~~i~~~ia~~l 789 (973)
..++||||+++|+|.+++....... ...+++..+..++.|+++||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 9999999999999999985321110 11235677888999999999
Q ss_pred hhhhhcCCCCeEecCCCCCCeeecCCC--CeEEecccCcccccCCCC--cccccccCCcccccccccccc--CCCCccch
Q 002061 790 AYLHHDCSPPIIHRDIKSSNILLDEDY--EPKIADFGVAKIAENSPK--VSDYSCFAGTHGYIAPELAYT--CKVSEKSD 863 (973)
Q Consensus 790 ~~LH~~~~~~ivH~Dlkp~Nill~~~~--~~kl~Dfgl~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~--~~~~~~~D 863 (973)
+||| +.+|+||||||+||+++.++ .+||+|||+++....... ........||+.|+|||++.+ ..++.++|
T Consensus 182 ~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~D 258 (345)
T 3hko_A 182 HYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258 (345)
T ss_dssp HHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHH
T ss_pred HHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHH
Confidence 9999 78999999999999998776 899999999986643221 112334578999999999875 67899999
Q ss_pred HHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 002061 864 VFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPM 943 (973)
Q Consensus 864 vwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~ 943 (973)
||||||++|||++|+.||.... .............. ............+.+++.+|++.||.+||++
T Consensus 259 iwslG~il~el~~g~~pf~~~~-----~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~ 325 (345)
T 3hko_A 259 AWSAGVLLHLLLMGAVPFPGVN-----DADTISQVLNKKLC--------FENPNYNVLSPLARDLLSNLLNRNVDERFDA 325 (345)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCC--------TTSGGGGGSCHHHHHHHHHHSCSCTTTSCCH
T ss_pred HHHHHHHHHHHHHCCCCCCCCC-----hHHHHHHHHhcccc--------cCCcccccCCHHHHHHHHHHcCCChhHCCCH
Confidence 9999999999999999996541 11111111111110 0011112234568899999999999999999
Q ss_pred HHHHHHh
Q 002061 944 REVVKML 950 (973)
Q Consensus 944 ~evl~~L 950 (973)
.|++++-
T Consensus 326 ~~~l~hp 332 (345)
T 3hko_A 326 MRALQHP 332 (345)
T ss_dssp HHHHHSH
T ss_pred HHHhcCh
Confidence 9999863
No 155
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2.3e-38 Score=356.11 Aligned_cols=267 Identities=18% Similarity=0.230 Sum_probs=203.0
Q ss_pred HHcCCcccCcccccCceEEEEEEecCC-----CcEEEEEeeecccc-------------HHHHHHHHHHHHhcCCCceee
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKN-----AGTVAVKQLWKGDG-------------VKVFAAEMEILGKIRHRNILK 735 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~-----~~~vavK~~~~~~~-------------~~~~~~E~~~l~~l~hpniv~ 735 (973)
...+|++.+.||+|+||+||+|.+..+ ++.||||++..... ...+.+|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 445899999999999999999998764 57899999865321 112334555666778999999
Q ss_pred EEEEEEeC----CeeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCee
Q 002061 736 LYACLLKG----GSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNIL 811 (973)
Q Consensus 736 l~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nil 811 (973)
+++++... ...|+||||+ +++|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+|||
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~----~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nil 184 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN----AKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLL 184 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEE
Confidence 99998764 4589999999 99999999753 346899999999999999999999 789999999999999
Q ss_pred ec--CCCCeEEecccCcccccCCCCcc-----cccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcc
Q 002061 812 LD--EDYEPKIADFGVAKIAENSPKVS-----DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEE 884 (973)
Q Consensus 812 l~--~~~~~kl~Dfgl~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~ 884 (973)
++ .++.+||+|||+++......... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 185 l~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~ 264 (364)
T 3op5_A 185 LNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDN 264 (364)
T ss_dssp EESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 99 88999999999997664322111 113345999999999999999999999999999999999999999864
Q ss_pred cCCcccHHHHHHHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002061 885 YGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
..+. .......... ...+..+.+..... ...+..+.+++..||+.||++||++.++++.|+++.
T Consensus 265 ~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~ 328 (364)
T 3op5_A 265 LKDP-KYVRDSKIRY--RENIASLMDKCFPA---ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGL 328 (364)
T ss_dssp TTCH-HHHHHHHHHH--HHCHHHHHHHHSCT---TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred ccCH-HHHHHHHHHh--hhhHHHHHHHhccc---ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Confidence 3221 1111111111 11122222221110 122456888999999999999999999999988653
No 156
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.2e-38 Score=341.81 Aligned_cols=247 Identities=26% Similarity=0.328 Sum_probs=184.1
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
+++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++.+++..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 46899999999999999999999999999999998652 3356788999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccc
Q 002061 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+ ++++.+++... ..+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||++...
T Consensus 92 ~e~~-~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 162 (275)
T 2eue_A 92 IEYA-GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM 162 (275)
T ss_dssp EECC-CEEHHHHHHTS-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC---
T ss_pred ehhc-CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceec
Confidence 9999 78888888643 35899999999999999999999 789999999999999999999999999999765
Q ss_pred cCCCCcccccccCCccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchh
Q 002061 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKV-SEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
..... .....||+.|+|||++.+..+ +.++||||+||++|||++|+.||... ................
T Consensus 163 ~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-----~~~~~~~~~~~~~~~~--- 231 (275)
T 2eue_A 163 TDGNF---LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE-----SIPVLFKNISNGVYTL--- 231 (275)
T ss_dssp ---------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHTCCCC---
T ss_pred cCccc---ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCCCC---
Confidence 44322 223468999999999987765 68999999999999999999999653 1222222211111111
Q ss_pred ccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
+......+.+++.+|++.||.+|||+.|++++-
T Consensus 232 ---------~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h~ 264 (275)
T 2eue_A 232 ---------PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDD 264 (275)
T ss_dssp ---------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCH
T ss_pred ---------CccCCHHHHHHHHHHhhcCHhHCCCHHHHhhCC
Confidence 111234578899999999999999999998753
No 157
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.3e-38 Score=359.56 Aligned_cols=255 Identities=22% Similarity=0.285 Sum_probs=196.7
Q ss_pred HHcCCccc-CcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHh-cCCCceeeEEEEEEe----CCeeE
Q 002061 674 QICNLEED-NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGK-IRHRNILKLYACLLK----GGSSF 747 (973)
Q Consensus 674 ~~~~~~~~-~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~-l~hpniv~l~~~~~~----~~~~~ 747 (973)
..++|.+. +.||+|+||+||+|++..+++.||||++... ..+.+|++++.+ .+||||+++++++.. +...|
T Consensus 59 ~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc---hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 34567776 6899999999999999999999999998643 456788988754 589999999999875 56789
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecC---CCCeEEeccc
Q 002061 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE---DYEPKIADFG 824 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~Dfg 824 (973)
+||||+++|+|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||
T Consensus 136 lv~E~~~gg~L~~~l~~~---~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDR---GDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp EEEECCCSEEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEeCCCCcHHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEecc
Confidence 999999999999999753 2345899999999999999999999 789999999999999997 7899999999
Q ss_pred CcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcc--cHHHHHHHHhccc
Q 002061 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGK--DIVYWVSTHLNNH 902 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~--~~~~~~~~~~~~~ 902 (973)
+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .....+......
T Consensus 210 ~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~- 285 (400)
T 1nxk_A 210 FAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE- 285 (400)
T ss_dssp TCEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCC-
T ss_pred cccccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCccc-
Confidence 998654322 22345689999999999999999999999999999999999999976532211 122221111000
Q ss_pred cccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 903 ENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
............+.+++.+||+.||++|||+.|+++|-.
T Consensus 286 ----------~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~ 324 (400)
T 1nxk_A 286 ----------FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW 324 (400)
T ss_dssp ----------CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred ----------CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence 000111223456889999999999999999999999754
No 158
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=3.7e-38 Score=354.67 Aligned_cols=255 Identities=17% Similarity=0.153 Sum_probs=207.1
Q ss_pred HcCCcccCcccccCceEEEEEE-----ecCCCcEEEEEeeeccccHHHHHHHHHHHHhcC---CCceeeEEEEEEeCCee
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLD-----LKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIR---HRNILKLYACLLKGGSS 746 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~-----~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~---hpniv~l~~~~~~~~~~ 746 (973)
..+|++.+.||+|+||+||+|. ...+++.||||++... ....+.+|++++++++ |+||+++++++..++..
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~ 142 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGS 142 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCE
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCc
Confidence 3578999999999999999994 5667899999998654 4557788999988886 99999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecC-----------C
Q 002061 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE-----------D 815 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~-----------~ 815 (973)
|+||||+++|+|.+++..........+++..+..++.|+++||+||| +.+|+||||||+|||++. +
T Consensus 143 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~~~~ 219 (365)
T 3e7e_A 143 VLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDLS 219 (365)
T ss_dssp EEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC------C
T ss_pred EEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCcccccccc
Confidence 99999999999999998764445567999999999999999999999 889999999999999998 8
Q ss_pred CCeEEecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHH
Q 002061 816 YEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWV 895 (973)
Q Consensus 816 ~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~ 895 (973)
+.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 220 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~----- 294 (365)
T 3e7e_A 220 AGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK----- 294 (365)
T ss_dssp TTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE-----
T ss_pred CCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee-----
Confidence 999999999997665433334445567999999999999999999999999999999999999999654221000
Q ss_pred HHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCC-CCHHHHHHHhhcCC
Q 002061 896 STHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLR-PPMREVVKMLADAD 954 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R-pt~~evl~~L~~~~ 954 (973)
. ........ ..+.+.+++..|++.+|.+| |+++++.+.|++..
T Consensus 295 ---------~----~~~~~~~~---~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l 338 (365)
T 3e7e_A 295 ---------P----EGLFRRLP---HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVF 338 (365)
T ss_dssp ---------E----CSCCTTCS---SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHH
T ss_pred ---------e----chhccccC---cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHH
Confidence 0 01111111 13346678889999999998 67888888777653
No 159
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=5.2e-38 Score=353.03 Aligned_cols=263 Identities=22% Similarity=0.240 Sum_probs=205.6
Q ss_pred HHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeec-cccHHHHHHHHHHHHhcC-----CCceeeEEEEEEeCCee
Q 002061 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-GDGVKVFAAEMEILGKIR-----HRNILKLYACLLKGGSS 746 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~-~~~~~~~~~E~~~l~~l~-----hpniv~l~~~~~~~~~~ 746 (973)
...++|++.+.||+|+||+||+|++..+++.||||++.. ....+.+.+|+++++.+. ||||+++++++...+..
T Consensus 32 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~ 111 (360)
T 3llt_A 32 LLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHM 111 (360)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEE
T ss_pred EecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCee
Confidence 445789999999999999999999998899999999875 334556788999999986 99999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecC------------
Q 002061 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE------------ 814 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~------------ 814 (973)
++||||+ +++|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||+++.
T Consensus 112 ~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~~~~~~ 184 (360)
T 3llt_A 112 CLIFEPL-GPSLYEIITRN---NYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLITVRR 184 (360)
T ss_dssp EEEECCC-CCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCCEEEEEEEC
T ss_pred EEEEcCC-CCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEccccccccccchhc
Confidence 9999999 99999999864 2335889999999999999999999 789999999999999975
Q ss_pred -------------CCCeEEecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCC
Q 002061 815 -------------DYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPV 881 (973)
Q Consensus 815 -------------~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf 881 (973)
++.+||+|||+++...... ....||+.|+|||++.+..++.++||||+||++|||++|+.||
T Consensus 185 ~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf 259 (360)
T 3llt_A 185 VTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLF 259 (360)
T ss_dssp TTTCCEEEEEEESCCCEEECCCTTCEETTSCC-----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSC
T ss_pred ccccccccccccCCCCEEEEeccCceecCCCC-----cCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCC
Confidence 7899999999998654321 2356899999999999999999999999999999999999999
Q ss_pred CcccCCcccHHHHHHHHhccccc----------cchhcccc--------cc-------------CcchHHHHHHHHHHHH
Q 002061 882 EEEYGDGKDIVYWVSTHLNNHEN----------VLKVLDCE--------VA-------------SESIKEDMIKLLKIAV 930 (973)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~--------~~-------------~~~~~~~~~~l~~l~~ 930 (973)
.... ..+....+.......+. .....+.. .. ..........+.+++.
T Consensus 260 ~~~~--~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 337 (360)
T 3llt_A 260 RTHE--HMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLY 337 (360)
T ss_dssp CCSS--HHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHH
T ss_pred CCCc--HHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHH
Confidence 7531 11111111111110000 00000000 00 0000111256789999
Q ss_pred HhcCCCCCCCCCHHHHHHH
Q 002061 931 VCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 931 ~cl~~dP~~Rpt~~evl~~ 949 (973)
+||+.||++|||+.|+++|
T Consensus 338 ~~L~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 338 SILQIDPTLRPSPAELLKH 356 (360)
T ss_dssp HHCCSSGGGSCCHHHHTTS
T ss_pred HHhcCChhhCCCHHHHhcC
Confidence 9999999999999999875
No 160
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-37 Score=347.29 Aligned_cols=268 Identities=26% Similarity=0.350 Sum_probs=206.6
Q ss_pred HHHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhc--CCCceeeEEEEEEeC----Ce
Q 002061 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKI--RHRNILKLYACLLKG----GS 745 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l--~hpniv~l~~~~~~~----~~ 745 (973)
....++|++.+.||+|+||+||+|++. ++.||||++.... ...+.+|.+++... +||||+++++++... ..
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~-~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 109 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE-EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ 109 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCE
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc-cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCc
Confidence 344578999999999999999999986 8899999986543 34455666666554 899999999999887 78
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCC--------CeEecCCCCCCeeecCCCC
Q 002061 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSP--------PIIHRDIKSSNILLDEDYE 817 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~--------~ivH~Dlkp~Nill~~~~~ 817 (973)
.|+||||+++|+|.++++.. .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.
T Consensus 110 ~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~ 180 (337)
T 3mdy_A 110 LYLITDYHENGSLYDYLKST------TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGT 180 (337)
T ss_dssp EEEEECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSC
T ss_pred eEEEEeccCCCcHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCC
Confidence 89999999999999999753 4889999999999999999999 66 9999999999999999999
Q ss_pred eEEecccCcccccCCCCccc--ccccCCccccccccccccCCCCcc------chHHHHHHHHHHHHhC----------CC
Q 002061 818 PKIADFGVAKIAENSPKVSD--YSCFAGTHGYIAPELAYTCKVSEK------SDVFSFGVVLLELVTG----------RK 879 (973)
Q Consensus 818 ~kl~Dfgl~~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~------~DvwslG~~l~el~tg----------~~ 879 (973)
+||+|||+++.......... .....||+.|+|||++.+..++.+ +|||||||++|||++| +.
T Consensus 181 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~ 260 (337)
T 3mdy_A 181 CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQL 260 (337)
T ss_dssp EEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccc
Confidence 99999999976644322211 223579999999999987766655 9999999999999999 66
Q ss_pred CCCcccCCcccHHHHHHHHhccccccchhccccccC-cchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCC
Q 002061 880 PVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVAS-ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCT 957 (973)
Q Consensus 880 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 957 (973)
||..................... ..+.... ....+....+.+++.+||+.||++|||+.|++++|+.+....
T Consensus 261 p~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 261 PYHDLVPSDPSYEDMREIVCIKK------LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSC------CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cHhhhcCCCCchhhhHHHHhhhc------cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 66554333333332222221111 0111111 112356778999999999999999999999999999876443
No 161
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=4.2e-38 Score=343.55 Aligned_cols=264 Identities=18% Similarity=0.175 Sum_probs=210.9
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhcCCCceeeEEEEE-EeCCeeEEEEEcc
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACL-LKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~-~~~~~~~lv~e~~ 753 (973)
.++|++.+.||+|+||+||+|++..+++.||||++......+.+.+|+++++.++|++++..+.++ ..+...++||||+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 87 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 87 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence 468999999999999999999999889999999988766667889999999999988766665554 6677889999999
Q ss_pred CCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeec---CCCCeEEecccCccccc
Q 002061 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD---EDYEPKIADFGVAKIAE 830 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~---~~~~~kl~Dfgl~~~~~ 830 (973)
+++|.+++... ...+++..+..++.|++.||+||| +++++||||||+||+++ .++.+||+|||++....
T Consensus 88 -~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 159 (296)
T 3uzp_A 88 -GPSLEDLFNFC----SRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp -CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred -CCCHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence 99999999753 335899999999999999999999 78999999999999994 78899999999998765
Q ss_pred CCCCc-----ccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCC-cccHHHHHHH-Hhcccc
Q 002061 831 NSPKV-----SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGD-GKDIVYWVST-HLNNHE 903 (973)
Q Consensus 831 ~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~-~~~~~~~~~~-~~~~~~ 903 (973)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .......+.. ......
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 239 (296)
T 3uzp_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI 239 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred ccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch
Confidence 43321 1123457899999999999999999999999999999999999999864321 1122221111 111100
Q ss_pred ccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCC
Q 002061 904 NVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCT 957 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 957 (973)
. .........+.+++.+||+.||++||++.++++.|+++....
T Consensus 240 ---~--------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 240 ---E--------VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp ---H--------HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred ---H--------HHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence 0 001122356889999999999999999999999999875433
No 162
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.7e-38 Score=347.69 Aligned_cols=264 Identities=22% Similarity=0.310 Sum_probs=200.8
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc----cHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
+++|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++..++..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 468999999999999999999999999999999886532 2456788999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccccc
Q 002061 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++++|.+++... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||.+....
T Consensus 82 e~~~~~~l~~~~~~~-----~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 153 (311)
T 4agu_A 82 EYCDHTVLHELDRYQ-----RGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLT 153 (311)
T ss_dssp ECCSEEHHHHHHHTS-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EeCCCchHHHHHhhh-----cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhcc
Confidence 999999998887642 35889999999999999999999 7899999999999999999999999999998665
Q ss_pred CCCCcccccccCCcccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccc-------
Q 002061 831 NSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH------- 902 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~------- 902 (973)
.... ......||+.|+|||++.+ ..++.++||||+|+++|+|++|+.||.... ..+....+.......
T Consensus 154 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 229 (311)
T 4agu_A 154 GPSD--YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKS--DVDQLYLIRKTLGDLIPRHQQV 229 (311)
T ss_dssp --------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCSCCHHHHHH
T ss_pred Cccc--ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhcccccccccc
Confidence 3322 2233568999999999876 668999999999999999999999996542 111111111111100
Q ss_pred ----cccc--hhccccccCc---chHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 903 ----ENVL--KVLDCEVASE---SIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 903 ----~~~~--~~~~~~~~~~---~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.... ...++..... ........+.+++.+||+.||++|||+.|+++|-
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 286 (311)
T 4agu_A 230 FSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHP 286 (311)
T ss_dssp HHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSG
T ss_pred cccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcCh
Confidence 0000 0000000000 0122345688999999999999999999999873
No 163
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.2e-38 Score=367.19 Aligned_cols=350 Identities=17% Similarity=0.144 Sum_probs=284.0
Q ss_pred cceEEccCCcCCCCCCcccccCCCCCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEee
Q 002061 170 LVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELY 249 (973)
Q Consensus 170 L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~ 249 (973)
-+.++.+++.+. .+|..+. +++++|+|++|++++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|+
T Consensus 13 ~~~v~c~~~~l~--~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 88 (477)
T 2id5_A 13 DRAVLCHRKRFV--AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLR 88 (477)
T ss_dssp TTEEECCSCCCS--SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcC--cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECC
Confidence 357888888876 5677664 689999999999998889999999999999999999998889999999999999999
Q ss_pred ccccCCcCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCC
Q 002061 250 ANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPF 329 (973)
Q Consensus 250 ~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 329 (973)
+|++++..+..|.++++|++|+|++|++.+..|..|.++++|+.|++++|.+.+..+..|..+++|+.|++++|++++..
T Consensus 89 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 168 (477)
T 2id5_A 89 SNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIP 168 (477)
T ss_dssp SSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCC
T ss_pred CCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccC
Confidence 99999766677899999999999999999999999999999999999999999998999999999999999999999888
Q ss_pred CccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCccccCCC
Q 002061 330 PENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALP 409 (973)
Q Consensus 330 ~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 409 (973)
+..+..+++|+.|+|++|.+++. .+..|..+++|++|++++|.+.+.+|......
T Consensus 169 ~~~l~~l~~L~~L~l~~n~i~~~------------------------~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~- 223 (477)
T 2id5_A 169 TEALSHLHGLIVLRLRHLNINAI------------------------RDYSFKRLYRLKVLEISHWPYLDTMTPNCLYG- 223 (477)
T ss_dssp HHHHTTCTTCCEEEEESCCCCEE------------------------CTTCSCSCTTCCEEEEECCTTCCEECTTTTTT-
T ss_pred hhHhcccCCCcEEeCCCCcCcEe------------------------ChhhcccCcccceeeCCCCccccccCcccccC-
Confidence 88899999999999999999843 23467788999999999998776666554333
Q ss_pred CcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcC
Q 002061 410 NVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLE 489 (973)
Q Consensus 410 ~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 489 (973)
.+|+.|+|++|++++..+..+..+++|+.|+|++|++++..+..|..+++|++|+|+
T Consensus 224 -----------------------~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 280 (477)
T 2id5_A 224 -----------------------LNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLV 280 (477)
T ss_dssp -----------------------CCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECC
T ss_pred -----------------------ccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECC
Confidence 356666666666664444567777777777777777776666677777777777777
Q ss_pred CcccccCCCccccccccccchhccccccccCCCccccccCCCCeeecCCCccCCCCChhhhcccCceEEccCCccccccC
Q 002061 490 ENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLKLSSIDLSENQLSGSVP 569 (973)
Q Consensus 490 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~L~~l~ls~N~l~~~~p 569 (973)
+|++++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+++...+.....-....+++.+|...|..|
T Consensus 281 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p 360 (477)
T 2id5_A 281 GGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATP 360 (477)
T ss_dssp SSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEES
T ss_pred CCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCc
Confidence 77777777777777777777777777777666667777788888888888887543322111123445667778888777
Q ss_pred cc
Q 002061 570 LD 571 (973)
Q Consensus 570 ~~ 571 (973)
..
T Consensus 361 ~~ 362 (477)
T 2id5_A 361 EF 362 (477)
T ss_dssp GG
T ss_pred hH
Confidence 54
No 164
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=353.03 Aligned_cols=245 Identities=27% Similarity=0.345 Sum_probs=205.5
Q ss_pred HHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc----------cHHHHHHHHHHHHhcCCCceeeEEEEEEe
Q 002061 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----------GVKVFAAEMEILGKIRHRNILKLYACLLK 742 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----------~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 742 (973)
...++|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++..
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~ 100 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN 100 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence 45678999999999999999999999999999999987632 23456789999999999999999999999
Q ss_pred CCeeEEEEEccCCC-chHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEe
Q 002061 743 GGSSFLVLEYMPNG-NLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIA 821 (973)
Q Consensus 743 ~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 821 (973)
++..++||||+.+| +|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+
T Consensus 101 ~~~~~lv~e~~~~g~~l~~~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~ 172 (335)
T 3dls_A 101 QGFFQLVMEKHGSGLDLFAFIDRH-----PRLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLI 172 (335)
T ss_dssp SSEEEEEEECCTTSCBHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEEC
T ss_pred CCEEEEEEEeCCCCccHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEe
Confidence 99999999999777 999998753 35899999999999999999999 7899999999999999999999999
Q ss_pred cccCcccccCCCCcccccccCCccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhc
Q 002061 822 DFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKV-SEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLN 900 (973)
Q Consensus 822 Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 900 (973)
|||++........ .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||..... ..
T Consensus 173 Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----------~~- 237 (335)
T 3dls_A 173 DFGSAAYLERGKL---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE-----------TV- 237 (335)
T ss_dssp CCTTCEECCTTCC---BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG-----------GT-
T ss_pred ecccceECCCCCc---eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH-----------HH-
Confidence 9999987654322 223568999999999988876 7899999999999999999999965311 00
Q ss_pred cccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 901 NHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
...... +......+.+++.+||++||++|||+.|++++-.
T Consensus 238 -----~~~~~~------~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~ 277 (335)
T 3dls_A 238 -----EAAIHP------PYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPW 277 (335)
T ss_dssp -----TTCCCC------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTT
T ss_pred -----hhccCC------CcccCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 000000 0112346889999999999999999999999854
No 165
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.7e-39 Score=356.39 Aligned_cols=251 Identities=24% Similarity=0.332 Sum_probs=194.4
Q ss_pred cCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCC--CceeeEEEEEEeCCeeEEE
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRH--RNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h--pniv~l~~~~~~~~~~~lv 749 (973)
.+|++.+.||+|+||+||+|.+.. ++.||||++... ...+.+.+|++++++++| |||+++++++..+...|+|
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTT-SCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCC-CCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 468999999999999999999864 889999998653 234668899999999976 9999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccc
Q 002061 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
||+ .+|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++ ++.+||+|||+++..
T Consensus 88 ~e~-~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~ 157 (343)
T 3dbq_A 88 MEC-GNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQM 157 (343)
T ss_dssp ECC-CSEEHHHHHHHS-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred EeC-CCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence 995 588999999853 35889999999999999999999 78999999999999997 678999999999876
Q ss_pred cCCCCcccccccCCcccccccccccc-----------CCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHH
Q 002061 830 ENSPKVSDYSCFAGTHGYIAPELAYT-----------CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTH 898 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~ 898 (973)
.............||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... . .......
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~---~-~~~~~~~ 233 (343)
T 3dbq_A 158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN---Q-ISKLHAI 233 (343)
T ss_dssp ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS---H-HHHHHHH
T ss_pred CcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh---H-HHHHHHH
Confidence 54433333344679999999999864 6788999999999999999999999975321 1 1111111
Q ss_pred hccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 899 LNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.. +......+......+.+++.+||+.||.+|||+.|++++..
T Consensus 234 ~~----------~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~ 276 (343)
T 3dbq_A 234 ID----------PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 276 (343)
T ss_dssp HC----------TTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred hc----------CCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcc
Confidence 11 11111111111245788999999999999999999998754
No 166
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=3.6e-39 Score=357.21 Aligned_cols=262 Identities=27% Similarity=0.300 Sum_probs=209.3
Q ss_pred cCCcccCcccccCceEEEEEE----ecCCCcEEEEEeeecc--ccHHHHHHHHHHHHhcCCCceeeEEEEEE--eCCeeE
Q 002061 676 CNLEEDNLIGSGGTGKVYRLD----LKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLL--KGGSSF 747 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~----~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~--~~~~~~ 747 (973)
.+|++.+.||+|+||+||+|+ ...+++.||||++... ...+.+.+|++++++++||||+++++++. .....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 578899999999999999999 4567899999998763 34456899999999999999999999886 456789
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcc
Q 002061 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+||||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.
T Consensus 103 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 175 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRH----RARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAK 175 (327)
T ss_dssp EEEECCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCE
T ss_pred EEEeecCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccce
Confidence 999999999999999864 235899999999999999999999 7899999999999999999999999999998
Q ss_pred cccCCCCc-ccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCC----------cccHHHHHH
Q 002061 828 IAENSPKV-SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGD----------GKDIVYWVS 896 (973)
Q Consensus 828 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~----------~~~~~~~~~ 896 (973)
........ .......||..|+|||++.+..++.++||||||+++|+|++|+.||.....+ ........
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 254 (327)
T 3lxl_A 176 LLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLL- 254 (327)
T ss_dssp ECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHH-
T ss_pred ecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHH-
Confidence 76543322 1223356788999999999888999999999999999999999999653210 00001111
Q ss_pred HHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002061 897 THLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
+.................+.+++.+||+.||++|||+.|++++|+.+..
T Consensus 255 ----------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 303 (327)
T 3lxl_A 255 ----------ELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 303 (327)
T ss_dssp ----------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred ----------HHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 1111111111223345668899999999999999999999999998754
No 167
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=4.2e-38 Score=348.04 Aligned_cols=250 Identities=25% Similarity=0.312 Sum_probs=196.4
Q ss_pred HcCCcccCcccccCceEEEEEEec---CCCcEEEEEeeecc------ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCe
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLK---KNAGTVAVKQLWKG------DGVKVFAAEMEILGKIRHRNILKLYACLLKGGS 745 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~---~~~~~vavK~~~~~------~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 745 (973)
.++|++.+.||+|+||+||+|+.. .+++.||||++... .....+.+|++++++++||||+++++++..++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 467899999999999999999985 57899999998753 234557889999999999999999999999999
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccC
Q 002061 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
.|+||||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 167 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLERE-----GIFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGL 167 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSC
T ss_pred EEEEEeCCCCCcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCc
Confidence 99999999999999999764 34788899999999999999999 78999999999999999999999999999
Q ss_pred cccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhcccccc
Q 002061 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..............
T Consensus 168 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~i~~~~~~- 239 (327)
T 3a62_A 168 CKESIHDGT--VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN-----RKKTIDKILKCKLN- 239 (327)
T ss_dssp C------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHTCCC-
T ss_pred ccccccCCc--cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhCCCC-
Confidence 875432211 1233568999999999999999999999999999999999999996531 11121111111110
Q ss_pred chhccccccCcchHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHhh
Q 002061 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRP-----PMREVVKMLA 951 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~L~ 951 (973)
. +......+.+++.+||+.||.+|| ++.|+++|-.
T Consensus 240 -------~----p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~ 279 (327)
T 3a62_A 240 -------L----PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPF 279 (327)
T ss_dssp -------C----CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGG
T ss_pred -------C----CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCc
Confidence 0 112234678899999999999999 7889987643
No 168
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=3.2e-38 Score=344.46 Aligned_cols=264 Identities=18% Similarity=0.175 Sum_probs=206.1
Q ss_pred HHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhcCCCceeeEEEEE-EeCCeeEEEEE
Q 002061 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACL-LKGGSSFLVLE 751 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~-~~~~~~~lv~e 751 (973)
...++|++.+.||+|+||+||+|++..+++.||||+.......+.+.+|+++++.++|++++..+.++ ..++..++|||
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 34568999999999999999999999899999999887766666788999999999888776666554 67788899999
Q ss_pred ccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeee---cCCCCeEEecccCccc
Q 002061 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL---DEDYEPKIADFGVAKI 828 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfgl~~~ 828 (973)
|+ +++|.+++... ...+++..+..++.|++.||+||| +++|+||||||+||++ +.++.+||+|||+++.
T Consensus 86 ~~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~ 157 (296)
T 4hgt_A 86 LL-GPSLEDLFNFC----SRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp CC-CCBHHHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred cc-CCCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCcccee
Confidence 99 99999999753 335899999999999999999999 7899999999999999 7889999999999987
Q ss_pred ccCCCCc-----ccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCc-ccHHHHH-HHHhcc
Q 002061 829 AENSPKV-----SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDG-KDIVYWV-STHLNN 901 (973)
Q Consensus 829 ~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~-~~~~~~~-~~~~~~ 901 (973)
....... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ......+ ......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 237 (296)
T 4hgt_A 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST 237 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS
T ss_pred ccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc
Confidence 6543321 12234578999999999999999999999999999999999999997643221 1111111 111111
Q ss_pred ccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002061 902 HENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
.. . .........+.+++.+||+.||++||++.++++.|+++..
T Consensus 238 ~~---~--------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~ 280 (296)
T 4hgt_A 238 PI---E--------VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 280 (296)
T ss_dssp CH---H--------HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred hh---h--------hhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence 00 0 0001123568899999999999999999999999997643
No 169
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=342.03 Aligned_cols=251 Identities=28% Similarity=0.381 Sum_probs=186.2
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
+++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++.+++..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 46789999999999999999999888999999998653 2346788999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccc
Q 002061 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++++|.+++... ...+++..+..++.|+++|++||| +.+++||||||+||+++.++.+||+|||.+...
T Consensus 90 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 162 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNR----VKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQL 162 (278)
T ss_dssp EECCTTEEHHHHHHTC----SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EecCCCCcHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeec
Confidence 9999999999999753 346899999999999999999999 789999999999999999999999999999866
Q ss_pred cCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhc
Q 002061 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
..... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||....... .... ..
T Consensus 163 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~----------~~ 225 (278)
T 3cok_A 163 KMPHE--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN-----TLNK----------VV 225 (278)
T ss_dssp C------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------------------CC
T ss_pred cCCCC--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH-----HHHH----------Hh
Confidence 43221 1223468999999999998889999999999999999999999997542110 0000 00
Q ss_pred cccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.... ..+......+.+++.+|++.||++||++.+++++-.
T Consensus 226 ~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~ 265 (278)
T 3cok_A 226 LADY--EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPF 265 (278)
T ss_dssp SSCC--CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTT
T ss_pred hccc--CCccccCHHHHHHHHHHcccCHhhCCCHHHHhcCcc
Confidence 0000 011122346788999999999999999999998643
No 170
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.5e-38 Score=359.95 Aligned_cols=251 Identities=23% Similarity=0.327 Sum_probs=195.7
Q ss_pred cCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcC--CCceeeEEEEEEeCCeeEEE
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIR--HRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~--hpniv~l~~~~~~~~~~~lv 749 (973)
.+|++.+.||+|+||+||+|.+.. ++.||||++... ...+.+.+|++++++++ ||||+++++++..++..|+|
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 458999999999999999999876 889999998653 23467889999999996 59999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccc
Q 002061 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|| +.+++|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+|||++ ++.+||+|||+++..
T Consensus 135 ~E-~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~ 204 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQM 204 (390)
T ss_dssp EE-CCSEEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC
T ss_pred Ee-cCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccc
Confidence 99 5688999999853 35788899999999999999999 88999999999999995 589999999999876
Q ss_pred cCCCCcccccccCCcccccccccccc-----------CCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHH
Q 002061 830 ENSPKVSDYSCFAGTHGYIAPELAYT-----------CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTH 898 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~ 898 (973)
.............||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ........
T Consensus 205 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~----~~~~~~~~ 280 (390)
T 2zmd_A 205 QPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN----QISKLHAI 280 (390)
T ss_dssp ---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC----HHHHHHHH
T ss_pred cCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH----HHHHHHHH
Confidence 54433223344579999999999865 3688999999999999999999999965321 11111111
Q ss_pred hccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 899 LNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.... .....+......+.+++.+||+.||.+||++.|++++..
T Consensus 281 ~~~~----------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~ 323 (390)
T 2zmd_A 281 IDPN----------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 323 (390)
T ss_dssp HCTT----------SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred hCcc----------ccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcC
Confidence 1111 100011111345788999999999999999999998743
No 171
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=4.2e-39 Score=355.04 Aligned_cols=263 Identities=28% Similarity=0.365 Sum_probs=208.9
Q ss_pred HcCCcccCcccccCceEEEEEEe-----cCCCcEEEEEeeeccc---cHHHHHHHHHHHHhc-CCCceeeEEEEEEeCC-
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDL-----KKNAGTVAVKQLWKGD---GVKVFAAEMEILGKI-RHRNILKLYACLLKGG- 744 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~-----~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~- 744 (973)
.++|++.+.||+|+||+||+|++ ..+++.||||++.... ..+.+.+|+++++++ +||||+++++++...+
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 105 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 105 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence 46889999999999999999985 3457899999987632 345688999999999 7999999999987754
Q ss_pred eeEEEEEccCCCchHHHHHhhhcCC-----------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeec
Q 002061 745 SSFLVLEYMPNGNLFQALHKRVKEG-----------KPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD 813 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~-----------~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~ 813 (973)
..++||||+++|+|.+++....... ...+++..+..++.|+++||+||| +.+++||||||+||+++
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~ 182 (316)
T 2xir_A 106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLS 182 (316)
T ss_dssp CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEC
T ss_pred ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEEC
Confidence 5899999999999999998642110 122789999999999999999999 78999999999999999
Q ss_pred CCCCeEEecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHH
Q 002061 814 EDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIV 892 (973)
Q Consensus 814 ~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~ 892 (973)
.++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |+.||...... ....
T Consensus 183 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-~~~~ 261 (316)
T 2xir_A 183 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFC 261 (316)
T ss_dssp GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS-HHHH
T ss_pred CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchh-HHHH
Confidence 999999999999986654433333334567889999999999999999999999999999998 99999754221 1111
Q ss_pred HHHHHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002061 893 YWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
..+.... .. .........+.+++.+||+.||.+||++.|++++|+.+..
T Consensus 262 ~~~~~~~--~~------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 310 (316)
T 2xir_A 262 RRLKEGT--RM------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310 (316)
T ss_dssp HHHHHTC--CC------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhccCc--cC------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 1111110 00 0011123468889999999999999999999999987643
No 172
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=4e-38 Score=366.75 Aligned_cols=256 Identities=24% Similarity=0.290 Sum_probs=209.2
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
.++|++.+.||+|+||+||+|++..+|+.||||++.+. ...+.+.+|++++++++||||+++++++...+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 46788999999999999999999999999999998653 3456788999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccc
Q 002061 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||++||+|.+++... ......+++..+..++.||+.||+||| +++|+||||||+||+++.+|.+||+|||+++..
T Consensus 264 mE~~~gg~L~~~l~~~-~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~ 339 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNV-DEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339 (543)
T ss_dssp ECCCTTCBHHHHHHTS-STTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEeccCCCHHHHHHHh-hcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeec
Confidence 9999999999999754 222446899999999999999999999 789999999999999999999999999999876
Q ss_pred cCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhc
Q 002061 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .................
T Consensus 340 ~~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~-~~~~~~~~~~i~~~~~~----- 411 (543)
T 3c4z_A 340 KAGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE-KVENKELKQRVLEQAVT----- 411 (543)
T ss_dssp CTTCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTC-CCCHHHHHHHHHHCCCC-----
T ss_pred cCCCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCcc-chhHHHHHHHHhhcccC-----
Confidence 54322 12235799999999999999999999999999999999999999976422 11222222222111110
Q ss_pred cccccCcchHHHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHH
Q 002061 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPM-----REVVKM 949 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~-----~evl~~ 949 (973)
.+......+.+++.+|++.||++||++ .++++|
T Consensus 412 -------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 412 -------YPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp -------CCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred -------CCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 111234567889999999999999964 777764
No 173
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.6e-38 Score=367.23 Aligned_cols=249 Identities=26% Similarity=0.318 Sum_probs=198.1
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
.++|++.+.||+|+||+||+|++..+++.||||++... .....+.+|+++++.++||||+++++++..++..|+|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 46799999999999999999999999999999998752 3345677899999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCC-CCeEecCCCCCCeeecCCCCeEEecccCccc
Q 002061 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCS-PPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~-~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
|||+++|+|.+++... ..+++..+..++.|++.||+||| + .+|+||||||+|||++.++.+||+|||+++.
T Consensus 227 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~ 298 (446)
T 4ejn_A 227 MEYANGGELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE 298 (446)
T ss_dssp ECCCSSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCT
T ss_pred EeeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCcee
Confidence 9999999999999764 35889999999999999999999 5 7999999999999999999999999999975
Q ss_pred ccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchh
Q 002061 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||... +...............
T Consensus 299 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~-----~~~~~~~~i~~~~~~~--- 368 (446)
T 4ejn_A 299 GIKDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-----DHEKLFELILMEEIRF--- 368 (446)
T ss_dssp TCC-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCC---
T ss_pred ccCCC--cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCC-----CHHHHHHHHHhCCCCC---
Confidence 43221 2233467999999999999999999999999999999999999999653 1122222211111110
Q ss_pred ccccccCcchHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHh
Q 002061 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRP-----PMREVVKML 950 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~L 950 (973)
+......+.+++.+||+.||.+|| ++.|+++|-
T Consensus 369 ---------p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp 406 (446)
T 4ejn_A 369 ---------PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHR 406 (446)
T ss_dssp ---------CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred ---------CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCc
Confidence 112235678999999999999999 999999754
No 174
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.1e-38 Score=342.63 Aligned_cols=254 Identities=26% Similarity=0.368 Sum_probs=208.0
Q ss_pred cCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEEccC
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
++|++.+.||+|+||+||+|++.. ++.||||++... ...+.+.+|++++++++||||+++++++..++..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETT-TEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEecC-CCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 578889999999999999999874 778999998764 355778999999999999999999999999999999999999
Q ss_pred CCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccCCCC
Q 002061 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~ 834 (973)
+++|.+++... ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++.......
T Consensus 87 ~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~- 158 (267)
T 3t9t_A 87 HGCLSDYLRTQ----RGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ- 158 (267)
T ss_dssp TCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH-
T ss_pred CCcHHHHHhhC----cccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEccccccccccccc-
Confidence 99999999754 345789999999999999999999 7899999999999999999999999999997654321
Q ss_pred cccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccccchhccccc
Q 002061 835 VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 835 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
........++..|+|||++.+..++.++||||+|+++|||++ |+.||... .............. .
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-----~~~~~~~~i~~~~~----~----- 224 (267)
T 3t9t_A 159 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR-----SNSEVVEDISTGFR----L----- 224 (267)
T ss_dssp HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-----CHHHHHHHHHTTCC----C-----
T ss_pred ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCC-----CHHHHHHHHhcCCc----C-----
Confidence 112223457789999999998899999999999999999999 89999653 11122211111110 0
Q ss_pred cCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002061 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
..+......+.+++.+||+.||++||++.|++++|+++.
T Consensus 225 --~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (267)
T 3t9t_A 225 --YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 263 (267)
T ss_dssp --CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 001112346788999999999999999999999998764
No 175
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.1e-38 Score=345.93 Aligned_cols=259 Identities=26% Similarity=0.373 Sum_probs=209.7
Q ss_pred cCHHHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhcCCCceeeEEEEEEe-------
Q 002061 670 IDAEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLK------- 742 (973)
Q Consensus 670 ~~~~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~------- 742 (973)
++.....+|++.+.||+|+||.||+|++..+++.||||++.... +.+.+|++++++++||||+++++++..
T Consensus 5 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (284)
T 2a19_B 5 VDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET 82 (284)
T ss_dssp CCHHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS--GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred ccchhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc--HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence 34566678999999999999999999999889999999987543 356789999999999999999998864
Q ss_pred ---------CCeeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeec
Q 002061 743 ---------GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD 813 (973)
Q Consensus 743 ---------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~ 813 (973)
....++||||+++|+|.+++.... ...+++..+..++.|++.||+||| +.+++||||||+||+++
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~ 156 (284)
T 2a19_B 83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR---GEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLV 156 (284)
T ss_dssp ------CCEEEEEEEEECCCCSCBHHHHHHHGG---GSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEE
T ss_pred ccccccccCcceEEEEEeccCCCCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEc
Confidence 445799999999999999997642 345889999999999999999999 78999999999999999
Q ss_pred CCCCeEEecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHH
Q 002061 814 EDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVY 893 (973)
Q Consensus 814 ~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~ 893 (973)
.++.+||+|||++........ .....|++.|+|||++.+..++.++||||||+++|||++|..|+.... .
T Consensus 157 ~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-------~ 226 (284)
T 2a19_B 157 DTKQVKIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-------K 226 (284)
T ss_dssp ETTEEEECCCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-------H
T ss_pred CCCCEEECcchhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-------H
Confidence 999999999999987654322 223468999999999999999999999999999999999998875321 1
Q ss_pred HHHHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCCCCC
Q 002061 894 WVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCTDKS 960 (973)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~ 960 (973)
...... .. .... .....+.+++.+||+.||++||++.|++++|+.+....++.
T Consensus 227 ~~~~~~-~~---------~~~~----~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~~ 279 (284)
T 2a19_B 227 FFTDLR-DG---------IISD----IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKN 279 (284)
T ss_dssp HHHHHH-TT---------CCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-----
T ss_pred HHHHhh-cc---------cccc----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCcc
Confidence 111110 00 0101 12235778999999999999999999999999987665443
No 176
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.8e-38 Score=352.42 Aligned_cols=256 Identities=22% Similarity=0.232 Sum_probs=204.5
Q ss_pred HHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeeEEEEEc
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
..++|++.+.||+|+||+||+|+++.+++.||||++..... ...+|++++.++ +||||+++++++.+++..|+||||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~ 97 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR--DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL 97 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC--CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC--ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeC
Confidence 45679999999999999999999999999999999876432 345788998888 799999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCC----CCeEEecccCccc
Q 002061 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED----YEPKIADFGVAKI 828 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~----~~~kl~Dfgl~~~ 828 (973)
+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||++..+ +.+||+|||+++.
T Consensus 98 ~~gg~L~~~i~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~ 169 (342)
T 2qr7_A 98 MKGGELLDKILRQ-----KFFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ 169 (342)
T ss_dssp CCSCBHHHHHHTC-----TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEE
T ss_pred CCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCccc
Confidence 9999999999753 35899999999999999999999 7899999999999998543 3599999999986
Q ss_pred ccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchh
Q 002061 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.... .................
T Consensus 170 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--~~~~~~~~~~i~~~~~~---- 241 (342)
T 2qr7_A 170 LRAENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGP--DDTPEEILARIGSGKFS---- 241 (342)
T ss_dssp CBCTTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSST--TSCHHHHHHHHHHCCCC----
T ss_pred CcCCCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCC--cCCHHHHHHHHccCCcc----
Confidence 644322 2233568999999999988889999999999999999999999997532 12222222221111110
Q ss_pred ccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
............+.+++.+|++.||++||++.|+++|-.
T Consensus 242 ----~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~ 280 (342)
T 2qr7_A 242 ----LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPW 280 (342)
T ss_dssp ----CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHH
T ss_pred ----cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCe
Confidence 001111223456889999999999999999999998644
No 177
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2.5e-38 Score=348.88 Aligned_cols=261 Identities=21% Similarity=0.275 Sum_probs=200.0
Q ss_pred HcCCccc-CcccccCceEEEEEEecCCCcEEEEEeeecc--ccHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeeEEEE
Q 002061 675 ICNLEED-NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 675 ~~~~~~~-~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~ 750 (973)
.+.|++. +.||+|+||+||+|++..+++.||||++... ...+.+.+|++++.++ +||||+++++++.+++..|+||
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 3567774 7899999999999999989999999998653 3467789999999985 7999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCC---eEEecccCcc
Q 002061 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE---PKIADFGVAK 827 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~---~kl~Dfgl~~ 827 (973)
||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++. +||+|||++.
T Consensus 91 e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~ 162 (316)
T 2ac3_A 91 EKMRGGSILSHIHKR-----RHFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGS 162 (316)
T ss_dssp ECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC
T ss_pred EcCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCcc
Confidence 999999999999864 35789999999999999999999 789999999999999998776 9999999987
Q ss_pred cccCCCC-----cccccccCCcccccccccccc-----CCCCccchHHHHHHHHHHHHhCCCCCCcccCCccc-------
Q 002061 828 IAENSPK-----VSDYSCFAGTHGYIAPELAYT-----CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKD------- 890 (973)
Q Consensus 828 ~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~------- 890 (973)
....... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 242 (316)
T 2ac3_A 163 GIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242 (316)
T ss_dssp -------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CC
T ss_pred ccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccc
Confidence 6542211 111223468999999999875 56889999999999999999999999764322100
Q ss_pred ---HHHHHHHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 891 ---IVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 891 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
............. .............+.+++.+|++.||++|||+.|++++-.
T Consensus 243 ~~~~~~~~~~i~~~~~--------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~ 298 (316)
T 2ac3_A 243 PACQNMLFESIQEGKY--------EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPW 298 (316)
T ss_dssp HHHHHHHHHHHHHCCC--------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTT
T ss_pred hhHHHHHHHHHhccCc--------ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChh
Confidence 0011111111000 0000011123456889999999999999999999999744
No 178
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3.8e-38 Score=364.12 Aligned_cols=261 Identities=27% Similarity=0.287 Sum_probs=198.1
Q ss_pred HHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeC------
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKG------ 743 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------ 743 (973)
..++|++.+.||+|+||+||+|++..+++.||||++... ...+++.+|+++++.++||||+++++++...
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 357899999999999999999999999999999998752 3456788999999999999999999999654
Q ss_pred CeeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecc
Q 002061 744 GSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADF 823 (973)
Q Consensus 744 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 823 (973)
...|+||||+++ ++.+.+.. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DF 208 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDF 208 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHTS-------CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC
T ss_pred CeEEEEEeCCCC-CHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEE
Confidence 457999999965 56666642 3789999999999999999999 789999999999999999999999999
Q ss_pred cCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHH-----
Q 002061 824 GVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTH----- 898 (973)
Q Consensus 824 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~----- 898 (973)
|+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.. ..+....+...
T Consensus 209 G~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~--~~~~~~~i~~~lg~p~ 283 (464)
T 3ttj_A 209 GLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD--YIDQWNKVIEQLGTPC 283 (464)
T ss_dssp CCC-----CC---CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHHHCSCC
T ss_pred EeeeecCCCc---ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHhcCCCC
Confidence 9998665432 2334678999999999999999999999999999999999999997531 11111111000
Q ss_pred --------------hcccccc-----chhcccc---ccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 899 --------------LNNHENV-----LKVLDCE---VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 899 --------------~~~~~~~-----~~~~~~~---~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
....+.. ...+... ............+.+++.+|++.||++|||+.|+++|-
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp 357 (464)
T 3ttj_A 284 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 357 (464)
T ss_dssp HHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred HHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcCh
Confidence 0000000 0000000 00111223356789999999999999999999999874
No 179
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.7e-37 Score=340.73 Aligned_cols=263 Identities=20% Similarity=0.247 Sum_probs=201.5
Q ss_pred HHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc-----cHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeE
Q 002061 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
...++|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++..++..|
T Consensus 31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 2h34_A 31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY 110 (309)
T ss_dssp ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence 45678999999999999999999999889999999986532 2366889999999999999999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcc
Q 002061 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+||||+++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.
T Consensus 111 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~ 182 (309)
T 2h34_A 111 VDMRLINGVDLAAMLRRQ-----GPLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIAS 182 (309)
T ss_dssp EEEECCCCEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC--
T ss_pred EEEEecCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCc
Confidence 999999999999999864 35889999999999999999999 7899999999999999999999999999987
Q ss_pred cccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccch
Q 002061 828 IAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
....... .......|++.|+|||++.+..++.++||||||+++|||++|+.||.... .. ..............
T Consensus 183 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~-~~~~~~~~~~~~~~ 255 (309)
T 2h34_A 183 ATTDEKL-TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ-----LS-VMGAHINQAIPRPS 255 (309)
T ss_dssp ---------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH-----HH-HHHHHHHSCCCCGG
T ss_pred ccccccc-ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch-----HH-HHHHHhccCCCCcc
Confidence 6543321 22234568999999999999999999999999999999999999997531 11 11111111110000
Q ss_pred hccccccCcchHHHHHHHHHHHHHhcCCCCCCCC-CHHHHHHHhhcCCCCCC
Q 002061 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRP-PMREVVKMLADADPCTD 958 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-t~~evl~~L~~~~~~~~ 958 (973)
.........+.+++.+||+.||++|| ++.++++.|+.......
T Consensus 256 --------~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 256 --------TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp --------GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred --------ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 11112234678899999999999999 99999999998866554
No 180
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=7.1e-38 Score=344.84 Aligned_cols=256 Identities=23% Similarity=0.326 Sum_probs=205.0
Q ss_pred HHHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEE
Q 002061 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
.....+|++.+.||+|+||+||+|++..+++.||||++......+.+.+|++++++++||||+++++++..++..|+|||
T Consensus 25 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp -----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 44556899999999999999999999999999999999887777889999999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccC
Q 002061 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|+++|+|.+++... ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||.+.....
T Consensus 105 ~~~~~~L~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 177 (314)
T 3com_A 105 YCGAGSVSDIIRLR----NKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD 177 (314)
T ss_dssp CCTTEEHHHHHHHH----TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBT
T ss_pred cCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhh
Confidence 99999999999743 345889999999999999999999 78999999999999999999999999999976643
Q ss_pred CCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhccc
Q 002061 832 SPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDC 911 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
... ......|++.|+|||++.+..++.++||||||+++|+|++|+.||.... ............. .
T Consensus 178 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~-------~ 243 (314)
T 3com_A 178 TMA--KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIH-----PMRAIFMIPTNPP-------P 243 (314)
T ss_dssp TBS--CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSCC-------C
T ss_pred hcc--ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHhcCCC-------c
Confidence 321 2233568999999999999899999999999999999999999997531 1111111111110 0
Q ss_pred cccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 912 EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 912 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.. .........+.+++.+||+.||.+|||+.+++++-
T Consensus 244 ~~--~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~ 280 (314)
T 3com_A 244 TF--RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHP 280 (314)
T ss_dssp CC--SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSH
T ss_pred cc--CCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCH
Confidence 00 01112245688999999999999999999998753
No 181
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2.2e-38 Score=355.07 Aligned_cols=244 Identities=26% Similarity=0.302 Sum_probs=193.0
Q ss_pred HHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc-----cHHHHHHHHHH-HHhcCCCceeeEEEEEEeCCeeE
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----GVKVFAAEMEI-LGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~-l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
..++|++.+.||+|+||+||+|+++.+++.||||++.+.. ....+.+|..+ ++.++||||+++++++.+++..|
T Consensus 36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~ 115 (373)
T 2r5t_A 36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY 115 (373)
T ss_dssp CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence 3467899999999999999999999999999999987632 23445667666 56789999999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcc
Q 002061 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+||||+++|+|.+++... ..+++..+..++.||+.||+||| +++|+||||||+||+++.+|.+||+|||+++
T Consensus 116 lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~ 187 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQRE-----RCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCK 187 (373)
T ss_dssp EEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCG
T ss_pred EEEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCcccc
Confidence 999999999999999764 35788899999999999999999 7899999999999999999999999999997
Q ss_pred cccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccch
Q 002061 828 IAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||... +..............
T Consensus 188 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~-----~~~~~~~~i~~~~~~--- 257 (373)
T 2r5t_A 188 ENIEHN--STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR-----NTAEMYDNILNKPLQ--- 257 (373)
T ss_dssp GGBCCC--CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS-----BHHHHHHHHHHSCCC---
T ss_pred ccccCC--CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCC-----CHHHHHHHHHhcccC---
Confidence 543221 1233467999999999999999999999999999999999999999653 122222222111110
Q ss_pred hccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 002061 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMR 944 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~ 944 (973)
. .......+.+++.+|++.||.+||++.
T Consensus 258 -----~----~~~~~~~~~~li~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 258 -----L----KPNITNSARHLLEGLLQKDRTKRLGAK 285 (373)
T ss_dssp -----C----CSSSCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred -----C----CCCCCHHHHHHHHHHcccCHHhCCCCC
Confidence 0 111234578899999999999999974
No 182
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.2e-38 Score=348.76 Aligned_cols=261 Identities=23% Similarity=0.311 Sum_probs=198.6
Q ss_pred HcCCcccCcccccCceEEEEEEecC---CCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCC---
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKK---NAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGG--- 744 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~---~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--- 744 (973)
..+|++.+.||+|+||+||+|++.. ++..||||++... ...+.+.+|++++++++||||+++++++.+..
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 112 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG 112 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccC
Confidence 4578899999999999999998865 4558999998643 33466889999999999999999999987654
Q ss_pred --eeEEEEEccCCCchHHHHHhhhc-CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEe
Q 002061 745 --SSFLVLEYMPNGNLFQALHKRVK-EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIA 821 (973)
Q Consensus 745 --~~~lv~e~~~~gsL~~~l~~~~~-~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 821 (973)
..++||||+++|+|.+++..... .....+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+
T Consensus 113 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kl~ 189 (313)
T 3brb_A 113 IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVA 189 (313)
T ss_dssp --CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEEEC
T ss_pred CcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEEe
Confidence 35999999999999999965422 23456899999999999999999999 8899999999999999999999999
Q ss_pred cccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhc
Q 002061 822 DFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLN 900 (973)
Q Consensus 822 Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~ 900 (973)
|||++................+++.|+|||++.+..++.++||||||+++|||++ |..||.... .......+...
T Consensus 190 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--~~~~~~~~~~~-- 265 (313)
T 3brb_A 190 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ--NHEMYDYLLHG-- 265 (313)
T ss_dssp SCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--GGGHHHHHHTT--
T ss_pred ecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCC--HHHHHHHHHcC--
Confidence 9999987654433333334567889999999999999999999999999999999 889996542 22222111111
Q ss_pred cccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002061 901 NHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
.. ...+......+.+++.+||+.||.+||++.+++++|+++.
T Consensus 266 -~~-----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~ 307 (313)
T 3brb_A 266 -HR-----------LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL 307 (313)
T ss_dssp -CC-----------CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -CC-----------CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 00 0111223456889999999999999999999999998764
No 183
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.1e-38 Score=353.42 Aligned_cols=265 Identities=25% Similarity=0.333 Sum_probs=205.9
Q ss_pred HHHHcCCcccCcccccCceEEEEEE-----ecCCCcEEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEeC
Q 002061 672 AEQICNLEEDNLIGSGGTGKVYRLD-----LKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKG 743 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~V~~a~-----~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 743 (973)
.....+|++.+.||+|+||+||+|+ ...+++.||||++... ....++.+|+.++++++||||+++++++..+
T Consensus 26 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 105 (327)
T 2yfx_A 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105 (327)
T ss_dssp BCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC
Confidence 3445789999999999999999999 4456789999998642 3456788999999999999999999999999
Q ss_pred CeeEEEEEccCCCchHHHHHhhhcC--CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecC---CCCe
Q 002061 744 GSSFLVLEYMPNGNLFQALHKRVKE--GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE---DYEP 818 (973)
Q Consensus 744 ~~~~lv~e~~~~gsL~~~l~~~~~~--~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~ 818 (973)
...|+||||+++|+|.+++...... ....+++..+..++.|++.||+||| +.+++||||||+||+++. +..+
T Consensus 106 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~ 182 (327)
T 2yfx_A 106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVA 182 (327)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCE
T ss_pred CCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceE
Confidence 9999999999999999999865221 1245889999999999999999999 789999999999999984 4469
Q ss_pred EEecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHH
Q 002061 819 KIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVST 897 (973)
Q Consensus 819 kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~ 897 (973)
||+|||++................||+.|+|||++.+..++.++||||||+++|||++ |+.||... ........+.
T Consensus 183 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~--~~~~~~~~~~- 259 (327)
T 2yfx_A 183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--SNQEVLEFVT- 259 (327)
T ss_dssp EECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHH-
T ss_pred EECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCc--CHHHHHHHHh-
Confidence 9999999986654433333344568899999999998899999999999999999998 99999653 1111111111
Q ss_pred HhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002061 898 HLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
.... ..........+.+++.+||+.||.+||++.|++++++.+..
T Consensus 260 --~~~~-----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 260 --SGGR-----------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp --TTCC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --cCCC-----------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 1100 00111233468889999999999999999999999997643
No 184
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-38 Score=350.81 Aligned_cols=257 Identities=27% Similarity=0.425 Sum_probs=199.9
Q ss_pred cCCcccCcccccCceEEEEEEecCCC----cEEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEE
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLKKNA----GTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~~~~----~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
.+|+..+.||+|+||+||+|++..++ ..||||++... .....+.+|++++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 46788899999999999999987543 35999998753 234568899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccc
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++... ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||+++.
T Consensus 124 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 124 ITEYMENGALDKFLREK----DGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp EEECCTTEEHHHHHHHT----TTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred EEeCCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchh
Confidence 99999999999999753 346899999999999999999999 78999999999999999999999999999987
Q ss_pred ccCCCCc-ccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccccc
Q 002061 829 AENSPKV-SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 829 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.... ..... ........
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~--~~~~~---~~~~~~~~--- 268 (333)
T 1mqb_A 197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS--NHEVM---KAINDGFR--- 268 (333)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--HHHHH---HHHHTTCC---
T ss_pred hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCC--HHHHH---HHHHCCCc---
Confidence 6543221 11223456789999999998999999999999999999999 999996531 11111 11111100
Q ss_pred hhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002061 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
..........+.+++.+||+.||++||++.|++++|+++..
T Consensus 269 --------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 309 (333)
T 1mqb_A 269 --------LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 309 (333)
T ss_dssp --------CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred --------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 00111234568899999999999999999999999987643
No 185
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=7.7e-39 Score=346.15 Aligned_cols=260 Identities=23% Similarity=0.332 Sum_probs=207.3
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEe--CCeeEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLK--GGSSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~l 748 (973)
.++|++.+.||+|+||+||+|++..+++.||+|++... ...+.+.+|++++++++||||+++++++.. +...|+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 46889999999999999999999999999999998652 345668899999999999999999998754 678999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCC-----eEecCCCCCCeeecCCCCeEEecc
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPP-----IIHRDIKSSNILLDEDYEPKIADF 823 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~-----ivH~Dlkp~Nill~~~~~~kl~Df 823 (973)
||||+++|+|.+++..... ....+++..+..++.|++.||+||| +.+ ++||||||+||+++.++.+||+||
T Consensus 85 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~df 160 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDF 160 (279)
T ss_dssp EEECCTTEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCC
T ss_pred EEeCCCCCCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecC
Confidence 9999999999999986532 3345899999999999999999999 556 999999999999999999999999
Q ss_pred cCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhcccc
Q 002061 824 GVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE 903 (973)
Q Consensus 824 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 903 (973)
|.++....... ......|++.|+|||++.+..++.++||||||+++|+|++|+.||.... .......+... ..
T Consensus 161 g~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~i~~~---~~ 233 (279)
T 2w5a_A 161 GLARILNHDTS--FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS--QKELAGKIREG---KF 233 (279)
T ss_dssp CHHHHC---CH--HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHT---CC
T ss_pred chheeeccccc--cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC--HHHHHHHHhhc---cc
Confidence 99876643321 1223468999999999999899999999999999999999999997541 11111111111 00
Q ss_pred ccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCC
Q 002061 904 NVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPC 956 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 956 (973)
. ..+......+.+++.+||+.||++||++.|+++++....+.
T Consensus 234 -------~----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~ 275 (279)
T 2w5a_A 234 -------R----RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHH 275 (279)
T ss_dssp -------C----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGG
T ss_pred -------c----cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhc
Confidence 0 01112345688999999999999999999999988766543
No 186
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=8.3e-38 Score=338.81 Aligned_cols=250 Identities=24% Similarity=0.303 Sum_probs=203.4
Q ss_pred cCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc--------ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeE
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--------DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--------~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++..+...+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 4688999999999999999999989999999988653 13677899999999999999999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCC----CeEEecc
Q 002061 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY----EPKIADF 823 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~----~~kl~Df 823 (973)
+||||+++++|.+++... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++ .+||+||
T Consensus 85 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~df 156 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK-----ESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDF 156 (283)
T ss_dssp EEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCC
T ss_pred EEEeecCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEec
Confidence 999999999999999753 35889999999999999999999 78999999999999998877 8999999
Q ss_pred cCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhcccc
Q 002061 824 GVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE 903 (973)
Q Consensus 824 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 903 (973)
|.+....... ......|++.|+|||++.+..++.++||||||+++|+|++|+.||.... .............
T Consensus 157 g~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~ 228 (283)
T 3bhy_A 157 GIAHKIEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET-----KQETLTNISAVNY 228 (283)
T ss_dssp TTCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHTTCC
T ss_pred ccceeccCCC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc-----hHHHHHHhHhccc
Confidence 9998664432 2233568999999999998999999999999999999999999996531 1111111111110
Q ss_pred ccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 904 NVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.............+.+++.+|++.||++||++.|++++
T Consensus 229 --------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 229 --------DFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp --------CCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred --------CCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 00011112234568899999999999999999999985
No 187
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.3e-38 Score=347.77 Aligned_cols=264 Identities=21% Similarity=0.248 Sum_probs=198.2
Q ss_pred cCCcccCcccccCceEEEEEEecCCCcEEEEEeeecccc---HHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEEc
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDG---VKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
++|++.+.||+|+||+||+|++..+++.||||++..... ...+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 578999999999999999999998999999998865322 12345799999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccCC
Q 002061 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
++ |+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 153 (324)
T 3mtl_A 82 LD-KDLKQYLDDC----GNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP 153 (324)
T ss_dssp CS-EEHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred cc-cCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence 96 6999998764 345889999999999999999999 789999999999999999999999999998755432
Q ss_pred CCcccccccCCcccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhcccc--ccchhc
Q 002061 833 PKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE--NVLKVL 909 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 909 (973)
. .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.... ..+....+........ ......
T Consensus 154 ~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~ 229 (324)
T 3mtl_A 154 T--KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGST--VEEQLHFIFRILGTPTEETWPGIL 229 (324)
T ss_dssp -----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred c--cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCChHhchhhh
Confidence 2 22233568999999999876 568999999999999999999999997541 1121222211111100 000000
Q ss_pred c---------ccccC----cchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 910 D---------CEVAS----ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 910 ~---------~~~~~----~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
. +.... .........+.+++.+|++.||++|||+.|++++-.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 284 (324)
T 3mtl_A 230 SNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPF 284 (324)
T ss_dssp GCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGG
T ss_pred cchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChh
Confidence 0 00000 001123456789999999999999999999998543
No 188
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.6e-38 Score=350.38 Aligned_cols=259 Identities=27% Similarity=0.393 Sum_probs=206.5
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEE--EEEeeec---cccHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeeEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTV--AVKQLWK---GDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~v--avK~~~~---~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l 748 (973)
.++|++.+.||+|+||.||+|++..++..+ |||++.. ....+.+.+|+++++++ +||||+++++++..++..|+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 468899999999999999999998878755 9998865 23456788999999999 99999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhc-----------CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCC
Q 002061 749 VLEYMPNGNLFQALHKRVK-----------EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE 817 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~-----------~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 817 (973)
||||+++|+|.+++..... .....+++..+..++.|+++||+||| +++|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCe
Confidence 9999999999999975420 22346899999999999999999999 789999999999999999999
Q ss_pred eEEecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHH
Q 002061 818 PKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVS 896 (973)
Q Consensus 818 ~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~ 896 (973)
+||+|||+++..... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||... .......
T Consensus 181 ~kL~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~-----~~~~~~~ 252 (327)
T 1fvr_A 181 AKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-----TCAELYE 252 (327)
T ss_dssp EEECCTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC-----CHHHHHH
T ss_pred EEEcccCcCcccccc---ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCC-----cHHHHHH
Confidence 999999998743221 11223456889999999998889999999999999999998 99999653 1112211
Q ss_pred HHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002061 897 THLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
....... ..........+.+++.+||+.||++||++.|++++|+++..
T Consensus 253 ~~~~~~~-----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 300 (327)
T 1fvr_A 253 KLPQGYR-----------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 300 (327)
T ss_dssp HGGGTCC-----------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhhcCCC-----------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1111100 01111233568899999999999999999999999997643
No 189
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4e-38 Score=344.12 Aligned_cols=257 Identities=27% Similarity=0.364 Sum_probs=203.1
Q ss_pred CCcccCcccccCceEEEEEEecCCCc---EEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCee-EEE
Q 002061 677 NLEEDNLIGSGGTGKVYRLDLKKNAG---TVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSS-FLV 749 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~V~~a~~~~~~~---~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~-~lv 749 (973)
.|+..+.||+|+||+||+|++..+++ .||+|++... ...+.+.+|++++++++||||+++++++.+++.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 45667899999999999999765444 7999988653 3346788999999999999999999999876554 999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccc
Q 002061 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+.+|+|.+++... ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||+++..
T Consensus 102 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 174 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSP----QRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDI 174 (298)
T ss_dssp ECCCTTCBHHHHHHCT----TCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTT
T ss_pred EecccCCCHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccc
Confidence 9999999999999753 345789999999999999999999 789999999999999999999999999999765
Q ss_pred cCCCC--cccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccch
Q 002061 830 ENSPK--VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 830 ~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
..... ........+++.|+|||++.+..++.++||||+|+++|+|++|..|+.... +..+....+......
T Consensus 175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~------ 247 (298)
T 3pls_A 175 LDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI-DPFDLTHFLAQGRRL------ 247 (298)
T ss_dssp TTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-CGGGHHHHHHTTCCC------
T ss_pred cCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccC-CHHHHHHHhhcCCCC------
Confidence 43221 122233567889999999999999999999999999999999665553321 222222222211100
Q ss_pred hccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002061 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
.........+.+++.+||+.||.+|||+.++++.|+++..
T Consensus 248 --------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~ 287 (298)
T 3pls_A 248 --------PQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVS 287 (298)
T ss_dssp --------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --------CCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 0111223468899999999999999999999999998643
No 190
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.5e-38 Score=343.69 Aligned_cols=251 Identities=28% Similarity=0.408 Sum_probs=199.7
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhcCCCceeeEEEEEEeC-CeeEEEEEcc
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKG-GSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-~~~~lv~e~~ 753 (973)
.++|++.+.||+|+||+||+|++. ++.||||++......+.+.+|++++++++||||+++++++.+. +..++||||+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 97 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 97 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred hhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence 468899999999999999999885 7899999998777778899999999999999999999987554 5789999999
Q ss_pred CCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccCCC
Q 002061 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++|+|.+++.... ...+++..+..++.|+++|++||| +++++||||||+||+++.++.+||+|||++.......
T Consensus 98 ~~~~L~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 171 (278)
T 1byg_A 98 AKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 171 (278)
T ss_dssp TTEEHHHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred CCCCHHHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeeccccccccccc
Confidence 9999999997642 223788899999999999999999 7899999999999999999999999999987554321
Q ss_pred CcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccccchhcccc
Q 002061 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
....+++.|+|||++.+..++.++||||||+++|||++ |+.||.... ..+....+. ...
T Consensus 172 -----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~--~~~~~~~~~----~~~--------- 231 (278)
T 1byg_A 172 -----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--LKDVVPRVE----KGY--------- 231 (278)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC--GGGHHHHHT----TTC---------
T ss_pred -----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHh----cCC---------
Confidence 12356889999999998899999999999999999998 999997542 222221111 100
Q ss_pred ccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002061 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
...........+.+++.+||+.||++||++.|+++.|+++.
T Consensus 232 -~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~ 272 (278)
T 1byg_A 232 -KMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 272 (278)
T ss_dssp -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -CCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence 01111223456889999999999999999999999998764
No 191
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-38 Score=342.88 Aligned_cols=255 Identities=24% Similarity=0.323 Sum_probs=204.6
Q ss_pred cCCcccC-cccccCceEEEEEEec--CCCcEEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEE
Q 002061 676 CNLEEDN-LIGSGGTGKVYRLDLK--KNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 676 ~~~~~~~-~lG~G~~g~V~~a~~~--~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
++|.+.+ .||+|+||+||+|.+. .++..||||++... ...+.+.+|++++++++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 3455555 8999999999999864 45778999998763 3456788999999999999999999998 55678999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccc
Q 002061 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++++|.+++... ...+++..+..++.|+++||+||| +.+++||||||+||+++.++.+||+|||++...
T Consensus 88 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGK----REEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160 (287)
T ss_dssp EECCTTEEHHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEeCCCCCHHHHHHhC----CccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeee
Confidence 9999999999998642 345899999999999999999999 789999999999999999999999999999876
Q ss_pred cCCCCc-ccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccccch
Q 002061 830 ENSPKV-SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 830 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
...... .......+|+.|+|||++.+..++.++||||||+++|||++ |+.||.... .......+.. ..
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--~~~~~~~i~~----~~---- 230 (287)
T 1u59_A 161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK--GPEVMAFIEQ----GK---- 230 (287)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC--THHHHHHHHT----TC----
T ss_pred ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC--HHHHHHHHhc----CC----
Confidence 543222 12233456889999999988889999999999999999998 999997542 2222222111 10
Q ss_pred hccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002061 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
....+......+.+++.+||+.||++||++.|++++|+.+.
T Consensus 231 ------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 271 (287)
T 1u59_A 231 ------RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 271 (287)
T ss_dssp ------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ------cCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 00111223456889999999999999999999999999763
No 192
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.7e-37 Score=336.41 Aligned_cols=247 Identities=28% Similarity=0.368 Sum_probs=205.8
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
.++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++.+++..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 46789999999999999999999998999999998652 2346788999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccc
Q 002061 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++|+|.+++... ..+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||++...
T Consensus 93 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~ 164 (284)
T 2vgo_A 93 LEFAPRGELYKELQKH-----GRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHA 164 (284)
T ss_dssp ECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccC
Confidence 9999999999999764 24789999999999999999999 889999999999999999999999999998755
Q ss_pred cCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhc
Q 002061 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
.... .....|++.|+|||++.+..++.++||||+|+++|+|++|+.||.... .............
T Consensus 165 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~~------ 229 (284)
T 2vgo_A 165 PSLR----RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS-----HTETHRRIVNVDL------ 229 (284)
T ss_dssp SSSC----BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHTTCC------
T ss_pred cccc----cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCC-----HhHHHHHHhcccc------
Confidence 4321 223568999999999999999999999999999999999999996531 1111111111110
Q ss_pred cccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.. +......+.+++.+|++.||.+||++.|++++-
T Consensus 230 --~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~ 264 (284)
T 2vgo_A 230 --KF----PPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHP 264 (284)
T ss_dssp --CC----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCH
T ss_pred --CC----CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCH
Confidence 01 112234678899999999999999999999853
No 193
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.7e-38 Score=342.17 Aligned_cols=255 Identities=25% Similarity=0.333 Sum_probs=202.8
Q ss_pred HcCCcccCcccccCceEEEEEEecC---CCcEEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKK---NAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~---~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
.++|++.+.||+|+||+||+|++.. ++..||||++... ...+.+.+|++++++++||||+++++++.+ +..|+
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 4578999999999999999999764 3446999998763 345678899999999999999999999765 45689
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccc
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++++|.+++... ...+++..+..++.|+++||+||| +++++||||||+||+++.++.+||+|||++..
T Consensus 90 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 90 IMELYPYGELGHYLERN----KNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp EEECCTTCBHHHHHHHH----TTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred EEecCCCCCHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCcc
Confidence 99999999999999764 345789999999999999999999 78999999999999999999999999999986
Q ss_pred ccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccccch
Q 002061 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
...... .......+++.|+|||++.+..++.++||||||+++|||++ |+.||... ...+....+......
T Consensus 163 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~--~~~~~~~~~~~~~~~------ 233 (281)
T 3cc6_A 163 IEDEDY-YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWL--ENKDVIGVLEKGDRL------ 233 (281)
T ss_dssp C----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS--CGGGHHHHHHHTCCC------
T ss_pred cccccc-cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccC--ChHHHHHHHhcCCCC------
Confidence 644322 12233457889999999998899999999999999999998 99999754 222222222211100
Q ss_pred hccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002061 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
..+......+.+++.+||+.||++||++.|++++|+++.
T Consensus 234 --------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 234 --------PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp --------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --------CCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 001112346888999999999999999999999998753
No 194
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=3.4e-37 Score=337.88 Aligned_cols=253 Identities=25% Similarity=0.315 Sum_probs=201.2
Q ss_pred HHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc------ccHHHHHHHHHHHHhcCCCceeeEEEEEE--eCCe
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG------DGVKVFAAEMEILGKIRHRNILKLYACLL--KGGS 745 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~------~~~~~~~~E~~~l~~l~hpniv~l~~~~~--~~~~ 745 (973)
..++|++.+.||+|+||.||+|.+..+++.||||++... ...+.+.+|++++++++||||+++++++. +...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 357899999999999999999999999999999998653 34567899999999999999999999984 4567
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccC
Q 002061 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
.|+||||++++ |.+++... ....+++..+..++.|++.||+||| +++++||||||+||+++.++.+||+|||.
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~ 155 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSV---PEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGV 155 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHS---TTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEEehhccCC-HHHHHHhC---cccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeecccc
Confidence 89999999766 77777653 2446899999999999999999999 78999999999999999999999999999
Q ss_pred cccccCCCCcccccccCCccccccccccccCC--CCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhcccc
Q 002061 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYTCK--VSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE 903 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 903 (973)
+................||+.|+|||++.+.. ++.++||||||+++|||++|+.||... +.............
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-----~~~~~~~~i~~~~~ 230 (305)
T 2wtk_C 156 AEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD-----NIYKLFENIGKGSY 230 (305)
T ss_dssp CEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCS-----SHHHHHHHHHHCCC
T ss_pred ccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCc-----hHHHHHHHHhcCCC
Confidence 98765433333334456899999999987644 477999999999999999999999753 12222211111110
Q ss_pred ccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 904 NVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.. .......+.+++.+|++.||.+||++.|++++-
T Consensus 231 --------~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 265 (305)
T 2wtk_C 231 --------AI----PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHS 265 (305)
T ss_dssp --------CC----CSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSH
T ss_pred --------CC----CCccCHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence 00 112234678899999999999999999999863
No 195
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=7.7e-38 Score=356.82 Aligned_cols=281 Identities=21% Similarity=0.227 Sum_probs=212.7
Q ss_pred cccccccccccccCHHHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-ccHHHHHHHHHHHHhcC-------
Q 002061 658 SKWKLASFHHIDIDAEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIR------- 729 (973)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~------- 729 (973)
..+....++...++....++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++
T Consensus 19 ~~~~~~~~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~ 98 (397)
T 1wak_A 19 NDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDP 98 (397)
T ss_dssp ---CC--CCSSCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCG
T ss_pred ccCCCCCceEEehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCC
Confidence 3344455666666666678999999999999999999999999999999998764 34567889999999985
Q ss_pred -CCceeeEEEEEE----eCCeeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCC-CeEec
Q 002061 730 -HRNILKLYACLL----KGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSP-PIIHR 803 (973)
Q Consensus 730 -hpniv~l~~~~~----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~-~ivH~ 803 (973)
||||+++++++. .+...++||||+ ++++.+++... ....+++..+..++.|++.||+||| ++ +|+||
T Consensus 99 ~~~~iv~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHr 171 (397)
T 1wak_A 99 NREMVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKS---NYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHT 171 (397)
T ss_dssp GGGGBCCEEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECC
T ss_pred CcceeeeeecceeecCCCCceEEEEEecc-CccHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecC
Confidence 788999999987 456789999999 66777776543 2345899999999999999999999 66 99999
Q ss_pred CCCCCCeeecCCC-------------------------------------------------CeEEecccCcccccCCCC
Q 002061 804 DIKSSNILLDEDY-------------------------------------------------EPKIADFGVAKIAENSPK 834 (973)
Q Consensus 804 Dlkp~Nill~~~~-------------------------------------------------~~kl~Dfgl~~~~~~~~~ 834 (973)
||||+|||++.++ .+||+|||.++.....
T Consensus 172 Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-- 249 (397)
T 1wak_A 172 DIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-- 249 (397)
T ss_dssp CCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC--
T ss_pred CCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc--
Confidence 9999999999775 7999999999866432
Q ss_pred cccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcc----cHHHHHHHHhccccc------
Q 002061 835 VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGK----DIVYWVSTHLNNHEN------ 904 (973)
Q Consensus 835 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~----~~~~~~~~~~~~~~~------ 904 (973)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ +....+.......+.
T Consensus 250 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 326 (397)
T 1wak_A 250 ---FTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAG 326 (397)
T ss_dssp ---SCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHC
T ss_pred ---CccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcc
Confidence 2234689999999999999999999999999999999999999976433221 111111111111000
Q ss_pred --cchhcccc-------------------ccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 905 --VLKVLDCE-------------------VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 905 --~~~~~~~~-------------------~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
...++... .......+....+.+++.+||+.||++|||+.|+++|-
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 393 (397)
T 1wak_A 327 KYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHP 393 (397)
T ss_dssp TTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSG
T ss_pred cccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCc
Confidence 00000000 00012355667899999999999999999999999763
No 196
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.2e-37 Score=338.67 Aligned_cols=247 Identities=26% Similarity=0.324 Sum_probs=198.9
Q ss_pred CCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEe----CCeeEE
Q 002061 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLK----GGSSFL 748 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~----~~~~~l 748 (973)
.|++.+.||+|+||+||+|.+..++..||+|++... ...+.+.+|+.++++++||||+++++++.. +...++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 467788999999999999999999999999988652 345668899999999999999999999865 356899
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCC--eEecCCCCCCeeec-CCCCeEEecccC
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPP--IIHRDIKSSNILLD-EDYEPKIADFGV 825 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~Dlkp~Nill~-~~~~~kl~Dfgl 825 (973)
||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+ ++||||||+||+++ .++.+||+|||+
T Consensus 107 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred EEEecCCCCHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 99999999999999764 35789999999999999999999 667 99999999999998 789999999999
Q ss_pred cccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhcccccc
Q 002061 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
+...... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.... ...............
T Consensus 179 ~~~~~~~----~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~----~~~~~~~~~~~~~~~- 248 (290)
T 1t4h_A 179 ATLKRAS----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ----NAAQIYRRVTSGVKP- 248 (290)
T ss_dssp GGGCCTT----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS----SHHHHHHHHTTTCCC-
T ss_pred ccccccc----ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcC----cHHHHHHHHhccCCc-
Confidence 9754432 1223568999999998864 58999999999999999999999996532 222222221111110
Q ss_pred chhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
..........+.+++.+||+.||.+|||+.|++++-
T Consensus 249 ---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 284 (290)
T 1t4h_A 249 ---------ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHA 284 (290)
T ss_dssp ---------GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred ---------cccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCc
Confidence 011111234688999999999999999999999763
No 197
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-37 Score=350.21 Aligned_cols=257 Identities=22% Similarity=0.319 Sum_probs=195.3
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCC------
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGG------ 744 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~------ 744 (973)
..+|++.+.||+|+||+||+|++..+|+.||||++... ...+++.+|+++++.++||||+++++++..+.
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 35789999999999999999999999999999998542 23456789999999999999999999997653
Q ss_pred eeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEeccc
Q 002061 745 SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFG 824 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 824 (973)
..|+||||+ +++|.+++... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~------~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 173 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE------KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFG 173 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred eEEEEEecC-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeee
Confidence 469999999 88999998752 4788999999999999999999 7899999999999999999999999999
Q ss_pred CcccccCCCCcccccccCCcccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhcccc
Q 002061 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE 903 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 903 (973)
+++..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.... ..+....+.......+
T Consensus 174 ~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~l~~i~~~~g~~~ 246 (367)
T 1cm8_A 174 LARQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD--HLDQLKEIMKVTGTPP 246 (367)
T ss_dssp TCEECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHHHCCCC
T ss_pred cccccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHhcCCCC
Confidence 99865432 233568999999999877 679999999999999999999999997541 1111111111000000
Q ss_pred c-c---------ch-------hccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 904 N-V---------LK-------VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 904 ~-~---------~~-------~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
. . .. ...... ..........+.+++.+|++.||++|||+.|+++|
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 247 AEFVQRLQSDEAKNYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHHHHTCSCHHHHHHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHhhhHHHHHHHHhCCCCCCCCH-HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 0 0 00 000000 00112234568899999999999999999999996
No 198
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.5e-37 Score=363.09 Aligned_cols=253 Identities=27% Similarity=0.355 Sum_probs=205.9
Q ss_pred HHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeec----cccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEE
Q 002061 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
...++|++.+.||+|+||+||+|++..+++.||||++.. ......+.+|++++++++||||+++++++..+...|+
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 98 (486)
T 3mwu_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (486)
T ss_dssp HHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEE
Confidence 345689999999999999999999999999999999864 3456778999999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeec---CCCCeEEecccC
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD---EDYEPKIADFGV 825 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~---~~~~~kl~Dfgl 825 (973)
||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++ .++.+||+|||+
T Consensus 99 v~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~ 170 (486)
T 3mwu_A 99 VGELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGL 170 (486)
T ss_dssp EECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSC
T ss_pred EEEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCc
Confidence 99999999999998764 35889999999999999999999 78999999999999995 456799999999
Q ss_pred cccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhcccccc
Q 002061 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
++...... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||... . .............
T Consensus 171 a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~--~---~~~~~~~i~~~~~-- 239 (486)
T 3mwu_A 171 STCFQQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK--N---EYDILKRVETGKY-- 239 (486)
T ss_dssp TTTBCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCS--S---HHHHHHHHHHTCC--
T ss_pred CeECCCCC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCC--C---HHHHHHHHHhCCC--
Confidence 98665432 2234579999999999876 5899999999999999999999999653 1 1111111111110
Q ss_pred chhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.............+.+++.+||+.||.+|||+.|+++|-
T Consensus 240 ------~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp 278 (486)
T 3mwu_A 240 ------AFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHP 278 (486)
T ss_dssp ------CSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCH
T ss_pred ------CCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCH
Confidence 000111223345688999999999999999999999974
No 199
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=4.7e-38 Score=342.14 Aligned_cols=253 Identities=25% Similarity=0.298 Sum_probs=202.3
Q ss_pred cCCcccC-cccccCceEEEEEEe--cCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEE
Q 002061 676 CNLEEDN-LIGSGGTGKVYRLDL--KKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 676 ~~~~~~~-~lG~G~~g~V~~a~~--~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
.+|++.+ .||+|+||+||+|.+ ..+++.||||++... ...+.+.+|+++++.++||||+++++++ ..+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 4677777 899999999999954 556789999998653 2356788999999999999999999998 5667899
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccc
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++++|.+++... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++..
T Consensus 95 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 166 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA 166 (291)
T ss_dssp EEECCTTEEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEeCCCCCHHHHHHhC-----cCCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence 99999999999999753 34889999999999999999999 78999999999999999999999999999987
Q ss_pred ccCCCCcc-cccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccccc
Q 002061 829 AENSPKVS-DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 829 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
........ ......+++.|+|||++.+..++.++||||||+++|||++ |+.||.... .......+. ....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--~~~~~~~~~----~~~~-- 238 (291)
T 1xbb_A 167 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK--GSEVTAMLE----KGER-- 238 (291)
T ss_dssp CCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC--HHHHHHHHH----TTCC--
T ss_pred eccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHH----cCCC--
Confidence 65433221 1223456789999999988889999999999999999999 999997541 111111111 1110
Q ss_pred hhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002061 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
...+......+.+++.+||+.||++||++.++++.|+++
T Consensus 239 --------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 277 (291)
T 1xbb_A 239 --------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 277 (291)
T ss_dssp --------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred --------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 011122345688999999999999999999999999875
No 200
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.4e-38 Score=350.66 Aligned_cols=267 Identities=21% Similarity=0.238 Sum_probs=197.3
Q ss_pred HHHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc----cHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeE
Q 002061 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
...+++|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++..+...+
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 345678999999999999999999999999999999986532 2345778999999999999999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeec-----CCCCeEEec
Q 002061 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD-----EDYEPKIAD 822 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~-----~~~~~kl~D 822 (973)
+||||++ |+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++ .++.+||+|
T Consensus 110 lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~D 180 (329)
T 3gbz_A 110 LIFEYAE-NDLKKYMDKN-----PDVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGD 180 (329)
T ss_dssp EEEECCS-EEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECC
T ss_pred EEEecCC-CCHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECc
Confidence 9999996 5999999753 34889999999999999999999 78999999999999994 455699999
Q ss_pred ccCcccccCCCCcccccccCCccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhcc
Q 002061 823 FGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNN 901 (973)
Q Consensus 823 fgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 901 (973)
||+++....... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||.... ..+....+......
T Consensus 181 fg~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~~~~~~~~ 256 (329)
T 3gbz_A 181 FGLARAFGIPIR--QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDS--EIDQLFKIFEVLGL 256 (329)
T ss_dssp TTHHHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHHHCC
T ss_pred CCCccccCCccc--ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCC--HHHHHHHHHHHhCC
Confidence 999987643322 22335679999999999874 48999999999999999999999996541 11111111111110
Q ss_pred ccc--cchh--------ccccccCcc-----hHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 902 HEN--VLKV--------LDCEVASES-----IKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 902 ~~~--~~~~--------~~~~~~~~~-----~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
... .... ..+...... .......+.+++.+|++.||++|||+.|+++|-.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 321 (329)
T 3gbz_A 257 PDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPY 321 (329)
T ss_dssp CCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred CchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcc
Confidence 000 0000 000000011 1113356789999999999999999999998643
No 201
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.9e-38 Score=351.78 Aligned_cols=265 Identities=18% Similarity=0.162 Sum_probs=208.2
Q ss_pred HcCCcccCcccccCceEEEEEEecC--------CCcEEEEEeeeccccHHHHHHHHHHHHhcCCCceee-----------
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKK--------NAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILK----------- 735 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~--------~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~----------- 735 (973)
.++|++.+.||+|+||+||+|++.. .++.||||++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 117 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLL 117 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT---STHHHHHHHHHHHCCHHHHHHHHHHTTCTTC
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc---chHHHHHHHHHHhcccchhhhhhhhccCCcc
Confidence 3689999999999999999999987 4789999998754 35789999999999999987
Q ss_pred ----EEEEEEe-CCeeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCe
Q 002061 736 ----LYACLLK-GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNI 810 (973)
Q Consensus 736 ----l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Ni 810 (973)
+++++.. +...|+||||+ +|+|.+++... ....+++..+..++.|++.||+||| +++|+||||||+||
T Consensus 118 ~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NI 190 (352)
T 2jii_A 118 AIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS---PKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENI 190 (352)
T ss_dssp SCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS---GGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGE
T ss_pred CccchhhccccCCcEEEEEecCC-CcCHHHHHHhC---CcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHE
Confidence 6777766 77899999999 99999999853 1346899999999999999999999 78999999999999
Q ss_pred eecCCC--CeEEecccCcccccCCCCc-----ccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCc
Q 002061 811 LLDEDY--EPKIADFGVAKIAENSPKV-----SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEE 883 (973)
Q Consensus 811 ll~~~~--~~kl~Dfgl~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~ 883 (973)
+++.++ .+||+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 191 l~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 270 (352)
T 2jii_A 191 FVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTN 270 (352)
T ss_dssp EEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred EEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 999998 8999999999766432211 112334789999999999999999999999999999999999999986
Q ss_pred ccCCcccHHHHHHHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002061 884 EYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
.......+............. ..+.... .......+.+++.+||+.||++||++.++++.|+++..
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 336 (352)
T 2jii_A 271 CLPNTEDIMKQKQKFVDKPGP---FVGPCGH---WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQ 336 (352)
T ss_dssp GTTCHHHHHHHHHHHHHSCCC---EECTTSC---EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHhccCChhh---hhhhccc---cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHH
Confidence 543333333332222221111 1111000 01123568889999999999999999999999998754
No 202
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=3.1e-38 Score=350.30 Aligned_cols=268 Identities=26% Similarity=0.339 Sum_probs=203.1
Q ss_pred cCHHHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc----cHHHHHHHHHHHHhcCCCceeeEEEEEEeCCe
Q 002061 670 IDAEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIRHRNILKLYACLLKGGS 745 (973)
Q Consensus 670 ~~~~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 745 (973)
+....+++|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++..++.
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 98 (331)
T 4aaa_A 19 LYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKR 98 (331)
T ss_dssp CCCBCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred hhhhhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCE
Confidence 33455678999999999999999999999999999999886532 23457789999999999999999999999999
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccC
Q 002061 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
.++||||+++++|.++... ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||+
T Consensus 99 ~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 170 (331)
T 4aaa_A 99 WYLVFEFVDHTILDDLELF-----PNGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGF 170 (331)
T ss_dssp EEEEEECCSEEHHHHHHHS-----TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTT
T ss_pred EEEEEecCCcchHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCC
Confidence 9999999999998887653 235899999999999999999999 78999999999999999999999999999
Q ss_pred cccccCCCCcccccccCCccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhc----
Q 002061 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLN---- 900 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~---- 900 (973)
++....... ......||+.|+|||++.+. .++.++||||+||++|+|++|+.||.... ..+....+.....
T Consensus 171 ~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~~~ 246 (331)
T 4aaa_A 171 ARTLAAPGE--VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDS--DIDQLYHIMMCLGNLIP 246 (331)
T ss_dssp C--------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCSCCH
T ss_pred ceeecCCcc--ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCC--cHHHHHHHHHHhCCCCh
Confidence 976543322 22335689999999998775 78999999999999999999999997542 1111111110000
Q ss_pred -------cccccchhcccccc-----CcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 901 -------NHENVLKVLDCEVA-----SESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 901 -------~~~~~~~~~~~~~~-----~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
..+.......+... ..........+.+++.+||+.||++|||+.|++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 247 RHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp HHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred hhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000000001100 00111235678899999999999999999999876
No 203
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=3.2e-39 Score=355.94 Aligned_cols=268 Identities=26% Similarity=0.332 Sum_probs=204.7
Q ss_pred CcccCcccccCceEEEEEEe----cCCCcEEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEe--CCeeEE
Q 002061 678 LEEDNLIGSGGTGKVYRLDL----KKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLK--GGSSFL 748 (973)
Q Consensus 678 ~~~~~~lG~G~~g~V~~a~~----~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~l 748 (973)
|++.+.||+|+||+||+|.. ..+++.||||++... ...+.+.+|++++++++||||+++++++.+ ....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 48899999999999988764 346889999998764 335668899999999999999999999987 467899
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccc
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++..
T Consensus 113 v~e~~~~~~L~~~l~~~------~~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 183 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKA 183 (318)
T ss_dssp EECCCTTCBHHHHGGGS------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEecccCCcHHHHHhhC------CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccc
Confidence 99999999999999753 3889999999999999999999 78999999999999999999999999999987
Q ss_pred ccCCCCc-ccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccch
Q 002061 829 AENSPKV-SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 829 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
....... .......+|..|+|||++.+..++.++||||+|+++|||++|+.||............+..... ......+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~ 262 (318)
T 3lxp_A 184 VPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQM-TVLRLTE 262 (318)
T ss_dssp CCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHH-HHHHHHH
T ss_pred ccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccch-hHHHHHH
Confidence 7544322 1223356788999999999989999999999999999999999999753211000000000000 0000001
Q ss_pred hccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002061 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
.+...............+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 263 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 310 (318)
T 3lxp_A 263 LLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE 310 (318)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 111111111222344578899999999999999999999999998754
No 204
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2e-39 Score=355.30 Aligned_cols=267 Identities=26% Similarity=0.343 Sum_probs=190.9
Q ss_pred cCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHh--cCCCceeeEEEEEEeCC----eeEEE
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGK--IRHRNILKLYACLLKGG----SSFLV 749 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~--l~hpniv~l~~~~~~~~----~~~lv 749 (973)
++|++.+.||+|+||+||+|++. ++.||||++... ....+.+|.+++.. ++||||+++++++.... ..++|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 79 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSR-EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT--TSCEEEEECC-T-THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc--CcceEEEEeccc-chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEE
Confidence 57899999999999999999875 789999998653 34567788888887 79999999999998776 78999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcC-----CCCeEecCCCCCCeeecCCCCeEEeccc
Q 002061 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDC-----SPPIIHRDIKSSNILLDEDYEPKIADFG 824 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 824 (973)
|||+++|+|.+++... .+++..+..++.|++.|++|||... +.+|+||||||+||+++.++.+||+|||
T Consensus 80 ~e~~~~g~L~~~l~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg 153 (303)
T 3gxj_A 80 SDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp EECCTTCCHHHHHHHC------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCC
T ss_pred EeccCCCCHHHHHhcc------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecC
Confidence 9999999999999753 4677788899999999999999422 4689999999999999999999999999
Q ss_pred CcccccCCCCccc--ccccCCccccccccccccC------CCCccchHHHHHHHHHHHHhC----------CCCCCcccC
Q 002061 825 VAKIAENSPKVSD--YSCFAGTHGYIAPELAYTC------KVSEKSDVFSFGVVLLELVTG----------RKPVEEEYG 886 (973)
Q Consensus 825 l~~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~~l~el~tg----------~~pf~~~~~ 886 (973)
+++.......... .....||+.|+|||++.+. .++.++|||||||++|||++| +.||.....
T Consensus 154 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~ 233 (303)
T 3gxj_A 154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 233 (303)
T ss_dssp C-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC
T ss_pred cceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCC
Confidence 9976654433221 2234689999999998766 444689999999999999999 666654322
Q ss_pred CcccHHHHHHHHhccccccchhccccccC-cchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCC
Q 002061 887 DGKDIVYWVSTHLNNHENVLKVLDCEVAS-ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCT 957 (973)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 957 (973)
................ ..+.... ....+....+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 234 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 234 SDPSVEEMRKVVCEQK------LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp -CCCCC-CHHHHTTSC------CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred CCccHHHHHHHHHHhh------cCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 1111111111111100 0111111 112255677999999999999999999999999999987654
No 205
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2.9e-37 Score=356.49 Aligned_cols=262 Identities=18% Similarity=0.194 Sum_probs=209.4
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhcCC-CceeeEEEEEEeCCeeEEEEEcc
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRH-RNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h-pniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.++|++.+.||+|+||+||+|++..+++.||||++......+++.+|+++++.++| +++..+..++..++..++||||+
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~ 85 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL 85 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC
Confidence 46899999999999999999999989999999998776666678999999999976 56666667777888999999999
Q ss_pred CCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeee---cCCCCeEEecccCccccc
Q 002061 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL---DEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfgl~~~~~ 830 (973)
+++|.+++... ...+++..+..++.||+.||+||| +++|+||||||+|||+ +.++.+||+|||+++...
T Consensus 86 -g~sL~~ll~~~----~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (483)
T 3sv0_A 86 -GPSLEDLFNFC----SRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157 (483)
T ss_dssp -CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred -CCCHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence 99999999753 345899999999999999999999 7899999999999999 588999999999998765
Q ss_pred CCCCc-----ccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhcccccc
Q 002061 831 NSPKV-----SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 831 ~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+........
T Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~--~~~~~~~~i~~~~~-- 233 (483)
T 3sv0_A 158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG--TKKQKYEKISEKKV-- 233 (483)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS--SHHHHHHHHHHHHH--
T ss_pred CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccch--hHHHHHHHHhhccc--
Confidence 43321 1122467999999999999999999999999999999999999999765322 11111111110000
Q ss_pred chhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002061 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
... ..........++.+++..||+.||++||++.+|++.|+++
T Consensus 234 ~~~-----~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 234 ATS-----IEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp HSC-----HHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred ccc-----HHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 000 0001112245788999999999999999999999998865
No 206
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=8.7e-38 Score=342.23 Aligned_cols=250 Identities=28% Similarity=0.391 Sum_probs=207.0
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
...|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|+.++++++||||+++++++..+...++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 35689999999999999999999988999999998653 345778999999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccC
Q 002061 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|+++++|.+++.. ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||.+.....
T Consensus 101 ~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 101 YLGGGSALDLLEP------GPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 171 (303)
T ss_dssp CCTTEEHHHHHTT------SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred eCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCc
Confidence 9999999999863 35889999999999999999999 78999999999999999999999999999976654
Q ss_pred CCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhccc
Q 002061 832 SPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDC 911 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
... ......|++.|+|||++.+..++.++||||||+++|+|++|+.||.... ............. +
T Consensus 172 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~-------~ 237 (303)
T 3a7i_A 172 TQI--KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH-----PMKVLFLIPKNNP-------P 237 (303)
T ss_dssp TBC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSCC-------C
T ss_pred ccc--ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcC-----HHHHHHHhhcCCC-------C
Confidence 321 2234568999999999999999999999999999999999999996531 1111111111110 0
Q ss_pred cccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 912 EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 912 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.. .......+.+++.+||+.||++|||+.|++++..
T Consensus 238 ~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 238 TL----EGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 273 (303)
T ss_dssp CC----CSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHH
T ss_pred CC----ccccCHHHHHHHHHHcCCChhhCcCHHHHhhChh
Confidence 11 1122345888999999999999999999998654
No 207
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.5e-37 Score=338.81 Aligned_cols=252 Identities=24% Similarity=0.317 Sum_probs=208.2
Q ss_pred HHHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCee
Q 002061 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSS 746 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 746 (973)
.....+|++.+.||+|+||+||+|++..+++.||+|++... ...+.+.+|+++++.++||||+++++++.+++..
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (294)
T 2rku_A 11 PRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFV 90 (294)
T ss_dssp TTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred CCcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEE
Confidence 34456899999999999999999999999999999988653 2456688999999999999999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCc
Q 002061 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
++||||+++++|.+++... ..+++..+..++.|+++|++||| +.+++||||||+||+++.++.+||+|||.+
T Consensus 91 ~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 162 (294)
T 2rku_A 91 FVVLELCRRRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 162 (294)
T ss_dssp EEEEECCTTCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCc
Confidence 9999999999999988754 35889999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccc
Q 002061 827 KIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
........ ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... ..............
T Consensus 163 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~-- 233 (294)
T 2rku_A 163 TKVEYDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC-----LKETYLRIKKNEYS-- 233 (294)
T ss_dssp EECCSTTC--CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHTTCCC--
T ss_pred eecccCcc--ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHhhccCC--
Confidence 86643322 2233568999999999999889999999999999999999999996531 11111111111110
Q ss_pred hhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
. +......+.+++.+|++.||++||++.|++++-
T Consensus 234 ------~----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~ 267 (294)
T 2rku_A 234 ------I----PKHINPVAASLIQKMLQTDPTARPTINELLNDE 267 (294)
T ss_dssp ------C----CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred ------C----ccccCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 0 112234578899999999999999999999864
No 208
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=4.1e-38 Score=365.42 Aligned_cols=193 Identities=26% Similarity=0.408 Sum_probs=154.8
Q ss_pred cCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeC-----Cee
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKG-----GSS 746 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~~ 746 (973)
++|++.+.||+|+||+||+|++..+++.||||++... ...+++.+|++++++++||||+++++++... ...
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 6899999999999999999999999999999998652 3456788999999999999999999998543 568
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCc
Q 002061 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
|+||||+ +|+|.+++.. ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||++
T Consensus 133 ~lv~e~~-~~~L~~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRT-----PVYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp EEEECCC-SEEHHHHHHS-----SCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEecc-ccchhhhccc-----CCCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccc
Confidence 9999998 6799998864 245899999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCc-------------------------ccccccCCcccccccccc-ccCCCCccchHHHHHHHHHHHHhC
Q 002061 827 KIAENSPKV-------------------------SDYSCFAGTHGYIAPELA-YTCKVSEKSDVFSFGVVLLELVTG 877 (973)
Q Consensus 827 ~~~~~~~~~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~~l~el~tg 877 (973)
+........ ......+||+.|+|||++ .+..++.++|||||||++|||++|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 876432211 122345789999999986 566799999999999999999993
No 209
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-38 Score=356.28 Aligned_cols=256 Identities=29% Similarity=0.383 Sum_probs=194.7
Q ss_pred CCcccCcccccCceEEEEEEecCC---CcEEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEe-CCeeEEE
Q 002061 677 NLEEDNLIGSGGTGKVYRLDLKKN---AGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLK-GGSSFLV 749 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~V~~a~~~~~---~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~~lv 749 (973)
.|++.+.||+|+||+||+|++..+ +..||||.+... ...+.+.+|+.++++++||||+++++++.. ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 467788999999999999998643 346899988652 345678999999999999999999998754 5678999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccc
Q 002061 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++|+|.+++... ...+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 170 ~e~~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 242 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNE----THNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDM 242 (373)
T ss_dssp EECCTTCBHHHHHHCT----TCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EECCCCCCHHHHHhhc----ccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeeccccccc
Confidence 9999999999999753 345788999999999999999999 789999999999999999999999999999866
Q ss_pred cCCCCc--ccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccccc
Q 002061 830 ENSPKV--SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 830 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
...... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||.... ..+....+.... .
T Consensus 243 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~--~~~~~~~~~~~~---~--- 314 (373)
T 3c1x_A 243 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN--TFDITVYLLQGR---R--- 314 (373)
T ss_dssp ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC--SSCHHHHHHTTC---C---
T ss_pred cccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCC--HHHHHHHHHcCC---C---
Confidence 433211 11223457889999999999999999999999999999999 677876542 222222221110 0
Q ss_pred hhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002061 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
.. .+......+.+++.+||+.||++||++.|++++|+++..
T Consensus 315 -~~-------~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~ 355 (373)
T 3c1x_A 315 -LL-------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 355 (373)
T ss_dssp -CC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CC-------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 00 011223468899999999999999999999999998754
No 210
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=7.5e-38 Score=340.12 Aligned_cols=249 Identities=18% Similarity=0.228 Sum_probs=201.3
Q ss_pred HHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeeE
Q 002061 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 747 (973)
...++|++.+.||+|+||+||+|++..+++.||||++... .....+.+|+..+.++ +||||+++++++.+++..+
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~ 87 (289)
T 1x8b_A 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML 87 (289)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred cccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence 4567899999999999999999999988999999998752 3456678899999999 9999999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCC------------
Q 002061 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED------------ 815 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~------------ 815 (973)
+||||+++|+|.+++..... ....+++..+..++.|++.||+||| +++|+||||||+||+++.+
T Consensus 88 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~ 163 (289)
T 1x8b_A 88 IQNEYCNGGSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDE 163 (289)
T ss_dssp EEEECCTTCBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC--------------
T ss_pred EEEEecCCCcHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCccccccccc
Confidence 99999999999999986422 2245899999999999999999999 7899999999999999844
Q ss_pred -------CCeEEecccCcccccCCCCcccccccCCccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCC
Q 002061 816 -------YEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGD 887 (973)
Q Consensus 816 -------~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~pf~~~~~~ 887 (973)
..+||+|||.+....... ...||+.|+|||++.+. .++.++|||||||++|+|++|..|+...
T Consensus 164 ~~~~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--- 234 (289)
T 1x8b_A 164 DDWASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG--- 234 (289)
T ss_dssp ------CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS---
T ss_pred ccccCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch---
Confidence 479999999998665432 23589999999999766 5668999999999999999998876432
Q ss_pred cccHHHHHHHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 888 GKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
...... . .... +.. +......+.+++.+||+.||++|||+.|++++-
T Consensus 235 -~~~~~~-~--~~~~--------~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 281 (289)
T 1x8b_A 235 -DQWHEI-R--QGRL--------PRI----PQVLSQEFTELLKVMIHPDPERRPSAMALVKHS 281 (289)
T ss_dssp -HHHHHH-H--TTCC--------CCC----SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCT
T ss_pred -hHHHHH-H--cCCC--------CCC----CcccCHHHHHHHHHHhCCCcccCCCHHHHhhCh
Confidence 111111 1 0000 011 112234688899999999999999999999764
No 211
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.6e-37 Score=346.99 Aligned_cols=254 Identities=23% Similarity=0.347 Sum_probs=205.2
Q ss_pred HHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc----------cHHHHHHHHHHHHhc-CCCceeeEEEEEE
Q 002061 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----------GVKVFAAEMEILGKI-RHRNILKLYACLL 741 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----------~~~~~~~E~~~l~~l-~hpniv~l~~~~~ 741 (973)
....+|++.+.||+|+||.||+|++..+|+.||||++.... ..+.+.+|+.+++++ +||||+++++++.
T Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 170 (365)
T 2y7j_A 91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE 170 (365)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence 34567999999999999999999999889999999886532 135678899999999 8999999999999
Q ss_pred eCCeeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEe
Q 002061 742 KGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIA 821 (973)
Q Consensus 742 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 821 (973)
.....|+||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+
T Consensus 171 ~~~~~~lv~e~~~g~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~ 242 (365)
T 2y7j_A 171 SSSFMFLVFDLMRKGELFDYLTEK-----VALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLS 242 (365)
T ss_dssp BSSEEEEEECCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEEC
T ss_pred eCCEEEEEEEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEE
Confidence 999999999999999999999753 35889999999999999999999 7899999999999999999999999
Q ss_pred cccCcccccCCCCcccccccCCcccccccccccc------CCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHH
Q 002061 822 DFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYT------CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWV 895 (973)
Q Consensus 822 Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~ 895 (973)
|||++........ .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... .....
T Consensus 243 DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~-----~~~~~ 314 (365)
T 2y7j_A 243 DFGFSCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR-----QILML 314 (365)
T ss_dssp CCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHH
T ss_pred ecCcccccCCCcc---cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC-----HHHHH
Confidence 9999987654322 234578999999999863 358889999999999999999999996531 11111
Q ss_pred HHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 896 STHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
......... ............+.+++.+|++.||++||++.|++++-
T Consensus 315 ~~i~~~~~~--------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp 361 (365)
T 2y7j_A 315 RMIMEGQYQ--------FSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHP 361 (365)
T ss_dssp HHHHHTCCC--------CCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred HHHHhCCCC--------CCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCc
Confidence 111111100 00000112235688999999999999999999999863
No 212
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.4e-37 Score=340.81 Aligned_cols=251 Identities=24% Similarity=0.303 Sum_probs=203.9
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc--ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEEc
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
.++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++.+++..|+||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 45789999999999999999999988999999998763 2345688999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeee---cCCCCeEEecccCcccc
Q 002061 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL---DEDYEPKIADFGVAKIA 829 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfgl~~~~ 829 (973)
+++|+|.+++... ..+++..+..++.|++.||+||| +.+++||||||+||++ +.++.+||+|||++...
T Consensus 88 ~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~ 159 (304)
T 2jam_A 88 VSGGELFDRILER-----GVYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159 (304)
T ss_dssp CCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred CCCccHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence 9999999998754 25789999999999999999999 7899999999999999 77889999999998754
Q ss_pred cCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhc
Q 002061 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||.... . .............
T Consensus 160 ~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~---~~~~~~i~~~~~~----- 225 (304)
T 2jam_A 160 QNG----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET--E---SKLFEKIKEGYYE----- 225 (304)
T ss_dssp CCB----TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC--H---HHHHHHHHHCCCC-----
T ss_pred CCC----ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC--H---HHHHHHHHcCCCC-----
Confidence 322 2223468999999999999999999999999999999999999996531 1 1111111111100
Q ss_pred cccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
............+.+++.+|++.||++||++.|++++-
T Consensus 226 ---~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~ 263 (304)
T 2jam_A 226 ---FESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHP 263 (304)
T ss_dssp ---CCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSH
T ss_pred ---CCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCc
Confidence 00111122345688999999999999999999999854
No 213
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=6.6e-38 Score=358.28 Aligned_cols=256 Identities=25% Similarity=0.311 Sum_probs=196.9
Q ss_pred HHHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc----------cHHHHHHHHHHHHhcCCCceeeEEEEEE
Q 002061 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----------GVKVFAAEMEILGKIRHRNILKLYACLL 741 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----------~~~~~~~E~~~l~~l~hpniv~l~~~~~ 741 (973)
....++|++.+.||+|+||+||+|.+..+++.||||++.... ....+.+|++++++++||||+++++++.
T Consensus 131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~ 210 (419)
T 3i6u_A 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 210 (419)
T ss_dssp HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE
T ss_pred hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 445678999999999999999999999999999999986531 1224789999999999999999999875
Q ss_pred eCCeeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCC---Ce
Q 002061 742 KGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY---EP 818 (973)
Q Consensus 742 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~---~~ 818 (973)
.+..|+||||+++|+|.+++.. ...+++..+..++.|++.||+||| +++|+||||||+||+++.++ .+
T Consensus 211 -~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~ 281 (419)
T 3i6u_A 211 -AEDYYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLI 281 (419)
T ss_dssp -SSEEEEEEECCTTCBGGGGTSS-----SCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCE
T ss_pred -cCceEEEEEcCCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceE
Confidence 4568999999999999888753 345899999999999999999999 78999999999999997544 59
Q ss_pred EEecccCcccccCCCCcccccccCCcccccccccccc---CCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHH
Q 002061 819 KIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYT---CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWV 895 (973)
Q Consensus 819 kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~ 895 (973)
||+|||+++...... ......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...... ......+
T Consensus 282 kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~-~~~~~~i 357 (419)
T 3i6u_A 282 KITDFGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ-VSLKDQI 357 (419)
T ss_dssp EECCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS-CCHHHHH
T ss_pred EEeecccceecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch-HHHHHHH
Confidence 999999998664332 2234578999999999853 56788999999999999999999999754221 1222221
Q ss_pred HHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 896 STHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
..... .............+.+++.+|++.||++||++.|+++|-.
T Consensus 358 ~~~~~-----------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~ 402 (419)
T 3i6u_A 358 TSGKY-----------NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 402 (419)
T ss_dssp HTTCC-----------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred hcCCC-----------CCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcc
Confidence 11100 0011111223456889999999999999999999998743
No 214
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=5.4e-38 Score=339.48 Aligned_cols=255 Identities=27% Similarity=0.381 Sum_probs=206.0
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEEcc
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.++|++.+.||+|+||+||+|++.. +..||||++... ...+.+.+|++++++++||||+++++++. ++..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETT-TEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcC-CcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence 3578899999999999999999864 678999998763 35678899999999999999999999876 45689999999
Q ss_pred CCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccCCC
Q 002061 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++++|.+++.... ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||.+.......
T Consensus 90 ~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 163 (279)
T 1qpc_A 90 ENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163 (279)
T ss_dssp TTCBHHHHTTSHH---HHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC
T ss_pred CCCCHHHHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcc
Confidence 9999999986431 125889999999999999999999 7899999999999999999999999999998765432
Q ss_pred CcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccccchhcccc
Q 002061 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
. .......++..|+|||++.+..++.++||||||+++|||++ |+.||.... .............
T Consensus 164 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----~~~~~~~~~~~~~--------- 228 (279)
T 1qpc_A 164 Y-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT-----NPEVIQNLERGYR--------- 228 (279)
T ss_dssp E-ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC-----HHHHHHHHHTTCC---------
T ss_pred c-ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccC-----HHHHHHHHhcccC---------
Confidence 2 22223456789999999988889999999999999999999 999996531 1111111111100
Q ss_pred ccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002061 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
..........+.+++.+|++.||++|||+.++++.|+++.
T Consensus 229 --~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 268 (279)
T 1qpc_A 229 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268 (279)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 0011122356889999999999999999999999998764
No 215
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.4e-38 Score=375.87 Aligned_cols=258 Identities=23% Similarity=0.306 Sum_probs=202.0
Q ss_pred cccccCceEEEEEEec--CCCcEEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEEccCCCc
Q 002061 683 LIGSGGTGKVYRLDLK--KNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNGN 757 (973)
Q Consensus 683 ~lG~G~~g~V~~a~~~--~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gs 757 (973)
.||+|+||+||+|.+. .++..||||+++.. ...+.+.+|++++++++||||+++++++.. +..|+||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999876 34667999998763 356789999999999999999999999876 56899999999999
Q ss_pred hHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccCCCCc-c
Q 002061 758 LFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV-S 836 (973)
Q Consensus 758 L~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~-~ 836 (973)
|.+++... ...+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++........ .
T Consensus 422 L~~~l~~~----~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 494 (613)
T 2ozo_A 422 LHKFLVGK----REEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 494 (613)
T ss_dssp HHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-------
T ss_pred HHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceee
Confidence 99999643 346899999999999999999999 789999999999999999999999999999876433221 1
Q ss_pred cccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccccchhccccccC
Q 002061 837 DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVAS 915 (973)
Q Consensus 837 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
......+++.|+|||++.+..++.++|||||||++|||++ |+.||.... ..+....+... . ..
T Consensus 495 ~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~--~~~~~~~i~~~----~----------~~ 558 (613)
T 2ozo_A 495 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK--GPEVMAFIEQG----K----------RM 558 (613)
T ss_dssp -------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--SHHHHHHHHTT----C----------CC
T ss_pred eccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCC--HHHHHHHHHcC----C----------CC
Confidence 1223345789999999999999999999999999999998 999997642 22222222111 1 00
Q ss_pred cchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCC
Q 002061 916 ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCTDKSPDNS 964 (973)
Q Consensus 916 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~~~~~ 964 (973)
..+......+.+++.+||+.||++||++.+|++.|+.+-.......+..
T Consensus 559 ~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~~~~~~ 607 (613)
T 2ozo_A 559 ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGG 607 (613)
T ss_dssp CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSCSCCCS
T ss_pred CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhccccCCc
Confidence 1112334578899999999999999999999999998654433333333
No 216
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2e-37 Score=362.80 Aligned_cols=251 Identities=27% Similarity=0.325 Sum_probs=201.6
Q ss_pred HHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEE
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
..++|++.+.||+|+||+||+|++..++..||||++... .....+.+|+++++.++||||+++++++..+...|+|
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 345799999999999999999999999999999998752 3456788999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecC---CCCeEEecccCc
Q 002061 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE---DYEPKIADFGVA 826 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~Dfgl~ 826 (973)
|||+++|+|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++. ++.+||+|||++
T Consensus 115 ~e~~~~g~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a 186 (494)
T 3lij_A 115 MECYKGGELFDEIIHR-----MKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLS 186 (494)
T ss_dssp EECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCC
Confidence 9999999999998754 35889999999999999999999 789999999999999976 455999999999
Q ss_pred ccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccc
Q 002061 827 KIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
....... ......||+.|+|||++. ..++.++||||+||++|+|++|+.||.... ..............
T Consensus 187 ~~~~~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~i~~~~~~-- 255 (494)
T 3lij_A 187 AVFENQK---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQT-----DQEILRKVEKGKYT-- 255 (494)
T ss_dssp EECBTTB---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTCCC--
T ss_pred eECCCCc---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCCC--
Confidence 8765432 223457999999999986 569999999999999999999999997531 11121111111110
Q ss_pred hhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
............+.+++.+||+.||.+|||+.|+++|
T Consensus 256 ------~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 256 ------FDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp ------CCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ------CCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 0011112334568899999999999999999999976
No 217
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=3.4e-37 Score=343.82 Aligned_cols=272 Identities=25% Similarity=0.323 Sum_probs=214.2
Q ss_pred cCHHHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHh--cCCCceeeEEEEEEeCC---
Q 002061 670 IDAEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGK--IRHRNILKLYACLLKGG--- 744 (973)
Q Consensus 670 ~~~~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~--l~hpniv~l~~~~~~~~--- 744 (973)
+.....++|++.+.||+|+||+||+|++. ++.||||++... ....+.+|+++++. ++||||+++++++..+.
T Consensus 36 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~-~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~ 112 (342)
T 1b6c_B 36 VQRTIARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSR-EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112 (342)
T ss_dssp HHHHHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEECGG-GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred ecccccccEEEEeeecCCCCcEEEEEEEc--CccEEEEEeCch-hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence 33455678999999999999999999985 889999998654 34567889999887 78999999999998775
Q ss_pred -eeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcC-----CCCeEecCCCCCCeeecCCCCe
Q 002061 745 -SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDC-----SPPIIHRDIKSSNILLDEDYEP 818 (973)
Q Consensus 745 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~Dlkp~Nill~~~~~~ 818 (973)
..++||||+++|+|.+++... .+++..+..++.|++.||+|||... +.+|+||||||+||+++.++.+
T Consensus 113 ~~~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~ 186 (342)
T 1b6c_B 113 TQLWLVSDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 186 (342)
T ss_dssp CCEEEEECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCE
T ss_pred ceeEEEEeecCCCcHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCE
Confidence 789999999999999999753 4889999999999999999999421 3689999999999999999999
Q ss_pred EEecccCcccccCCCCcc--cccccCCccccccccccccC------CCCccchHHHHHHHHHHHHhC----------CCC
Q 002061 819 KIADFGVAKIAENSPKVS--DYSCFAGTHGYIAPELAYTC------KVSEKSDVFSFGVVLLELVTG----------RKP 880 (973)
Q Consensus 819 kl~Dfgl~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~~l~el~tg----------~~p 880 (973)
||+|||++.......... ......||+.|+|||++.+. .++.++|||||||++|||++| +.|
T Consensus 187 kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p 266 (342)
T 1b6c_B 187 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 266 (342)
T ss_dssp EECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccC
Confidence 999999998765443221 22345789999999998765 234689999999999999999 788
Q ss_pred CCcccCCcccHHHHHHHHhccccccchhccccccC-cchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCC
Q 002061 881 VEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVAS-ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPC 956 (973)
Q Consensus 881 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 956 (973)
|............+......... .+.... ....+....+.+++.+||+.||++|||+.||+++|+++...
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 267 YYDLVPSDPSVEEMRKVVCEQKL------RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSCC------CCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ccccCcCcccHHHHHHHHHHHHh------CCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 87654433344444333221111 111111 11235567889999999999999999999999999987543
No 218
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=4.3e-38 Score=353.63 Aligned_cols=265 Identities=23% Similarity=0.347 Sum_probs=205.5
Q ss_pred HHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEE
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
..++|++.+.||+|+||+||+|++..+++.||+|++... ...+.+.+|++++++++||||+++++++..++..++||
T Consensus 31 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 110 (360)
T 3eqc_A 31 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 110 (360)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEE
Confidence 346799999999999999999999999999999998753 33467889999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccccc
Q 002061 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++|+|.+++... ..+++..+..++.|++.|++|||+ ..+|+||||||+||+++.++.+||+|||++....
T Consensus 111 e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 183 (360)
T 3eqc_A 111 EHMDGGSLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183 (360)
T ss_dssp CCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH--HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred ECCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH--hCCEEcCCccHHHEEECCCCCEEEEECCCCcccc
Confidence 999999999999764 247899999999999999999993 1389999999999999999999999999987553
Q ss_pred CCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhc----------
Q 002061 831 NSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLN---------- 900 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~---------- 900 (973)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ............
T Consensus 184 ~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 257 (360)
T 3eqc_A 184 DS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA--KELELMFGCQVEGDAAETPPRP 257 (360)
T ss_dssp HH----C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCH--HHHHHHHC--------------
T ss_pred cc----cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHhcccccccCCCCCCCc
Confidence 22 12235689999999999999999999999999999999999999975321 111110000000
Q ss_pred ---------------ccccc----chhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 901 ---------------NHENV----LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 901 ---------------~~~~~----~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
..... ...................+.+++.+||+.||++|||+.|+++|-.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 327 (360)
T 3eqc_A 258 RTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 327 (360)
T ss_dssp ----------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHH
T ss_pred ccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChH
Confidence 00000 0000000000011123456889999999999999999999998643
No 219
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.9e-37 Score=355.45 Aligned_cols=198 Identities=25% Similarity=0.315 Sum_probs=174.0
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc-cHHHHHHHHHHHHhc------CCCceeeEEEEEEeCCeeE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-GVKVFAAEMEILGKI------RHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l------~hpniv~l~~~~~~~~~~~ 747 (973)
..+|++.+.||+|+||+||+|++..+++.||||++.... ....+.+|+++++.+ .|+||+++++++......+
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 175 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC 175 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence 457999999999999999999999999999999987643 345677899988887 5779999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCC--eEEecccC
Q 002061 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE--PKIADFGV 825 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~--~kl~Dfgl 825 (973)
+||||++ ++|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+|||++.++. +||+|||+
T Consensus 176 lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~ 248 (429)
T 3kvw_A 176 MTFELLS-MNLYELIKKN---KFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGS 248 (429)
T ss_dssp EEECCCC-CBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred EEEeccC-CCHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeeccc
Confidence 9999995 6999999764 2345899999999999999999999 779999999999999999887 99999999
Q ss_pred cccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcc
Q 002061 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEE 884 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~ 884 (973)
++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 249 a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 249 SCYEHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp CEETTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ceecCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 9755432 22356899999999999999999999999999999999999999754
No 220
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=4.1e-38 Score=342.55 Aligned_cols=253 Identities=22% Similarity=0.281 Sum_probs=189.0
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc----cHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
.++|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.++...++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 467899999999999999999999899999999986532 2223444555578889999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCC-CeEecCCCCCCeeecCCCCeEEecccCcccc
Q 002061 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSP-PIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~-~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
||++ |+|.+++..... ....+++..+..++.|++.|++||| ++ +++||||||+||+++.++.+||+|||++...
T Consensus 86 e~~~-~~l~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp ECCS-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred ehhc-cchHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 9996 699888875422 3456899999999999999999999 66 9999999999999999999999999999766
Q ss_pred cCCCCcccccccCCcccccccccc----ccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhcccccc
Q 002061 830 ENSPKVSDYSCFAGTHGYIAPELA----YTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
..... .....||+.|+|||++ .+..++.++||||+||++|||++|+.||..... . .............
T Consensus 161 ~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~-~~~~~~~~~~~~~- 232 (290)
T 3fme_A 161 VDDVA---KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT---P-FQQLKQVVEEPSP- 232 (290)
T ss_dssp ------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC---H-HHHHHHHHHSCCC-
T ss_pred ccccc---ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc---h-HHHHHHHhccCCC-
Confidence 44322 2234689999999996 566789999999999999999999999964321 1 1111111111110
Q ss_pred chhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
..........+.+++.+|++.||++|||+.|++++
T Consensus 233 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 233 ---------QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp ---------CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ---------CcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 00111234568899999999999999999999884
No 221
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=5.4e-38 Score=343.04 Aligned_cols=258 Identities=30% Similarity=0.384 Sum_probs=201.2
Q ss_pred HcCCcccCcccccCceEEEEEEecCC---CcEEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEE-eCCeeE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKN---AGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLL-KGGSSF 747 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~---~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~~ 747 (973)
..+|++.+.||+|+||+||+|++..+ ...||||++... ...+.+.+|++++++++||||+++++++. .++..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 34688899999999999999997543 346899987653 34467889999999999999999999864 566789
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcc
Q 002061 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+||||+++|+|.+++... ...+++..+..++.|++.||+||| +++++||||||+||+++.++.+||+|||+++
T Consensus 104 ~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~ 176 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNE----THNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 176 (298)
T ss_dssp EEEECCTTCBHHHHHHCT----TCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGC
T ss_pred EEEeCCCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECcccccc
Confidence 999999999999999753 345789999999999999999999 7899999999999999999999999999997
Q ss_pred cccCCCC--cccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccc
Q 002061 828 IAENSPK--VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 828 ~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
....... ........+|+.|+|||++.+..++.++||||+|+++|||++ |..||... ...+....+......
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~--- 251 (298)
T 3f66_A 177 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV--NTFDITVYLLQGRRL--- 251 (298)
T ss_dssp CCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTS--CTTTHHHHHHTTCCC---
T ss_pred cccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccC--CHHHHHHHHhcCCCC---
Confidence 6643221 112233467889999999999999999999999999999999 55566543 222222221111100
Q ss_pred cchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002061 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
. .+......+.+++.+||+.||++||++.|+++.|+++..
T Consensus 252 ----~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 252 ----L-------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp ----C-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----C-------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 0 011123468889999999999999999999999998754
No 222
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=8.9e-39 Score=361.11 Aligned_cols=244 Identities=14% Similarity=0.143 Sum_probs=191.0
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeec-----cccHHHHHHHHH---HHHhcCCCceeeEE-------EE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-----GDGVKVFAAEME---ILGKIRHRNILKLY-------AC 739 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~-----~~~~~~~~~E~~---~l~~l~hpniv~l~-------~~ 739 (973)
..+|++.+.||+|+||+||+|++..+++.||||++.. ....+.+.+|++ .+++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 3578899999999999999999998899999999864 234577889994 55556899999998 66
Q ss_pred EEeCCe-----------------eEEEEEccCCCchHHHHHhhhcCC--CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCe
Q 002061 740 LLKGGS-----------------SFLVLEYMPNGNLFQALHKRVKEG--KPELDWFRRYKIALGAAKGIAYLHHDCSPPI 800 (973)
Q Consensus 740 ~~~~~~-----------------~~lv~e~~~~gsL~~~l~~~~~~~--~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~i 800 (973)
+..++. .|+||||+ +|+|.+++....... ...+++..+..++.|++.||+||| +++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 665532 78999999 689999998643221 233556888899999999999999 7899
Q ss_pred EecCCCCCCeeecCCCCeEEecccCcccccCCCCcccccccCCccccccccccccC-----------CCCccchHHHHHH
Q 002061 801 IHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTC-----------KVSEKSDVFSFGV 869 (973)
Q Consensus 801 vH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwslG~ 869 (973)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~ 301 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence 9999999999999999999999999985432 2233467 999999999887 8999999999999
Q ss_pred HHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 870 VLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 870 ~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
++|||++|+.||....... ....+... . ......+.+++.+||+.||++||++.|++++
T Consensus 302 il~elltg~~Pf~~~~~~~---------------~~~~~~~~-~-----~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 302 VIYWIWCADLPITKDAALG---------------GSEWIFRS-C-----KNIPQPVRALLEGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp HHHHHHHSSCCC------C---------------CSGGGGSS-C-----CCCCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred HHHHHHHCCCCCccccccc---------------chhhhhhh-c-----cCCCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence 9999999999996542110 00111110 0 1123468889999999999999999999874
No 223
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=4.1e-38 Score=370.99 Aligned_cols=260 Identities=28% Similarity=0.410 Sum_probs=209.4
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEEcc
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.++|++.+.||+|+||+||+|++.. +..||||++... ...+.+.+|++++++++||||+++++++.+ +..|+||||+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~ 343 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 343 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence 4567889999999999999999986 567999998763 356789999999999999999999999866 6789999999
Q ss_pred CCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccCCC
Q 002061 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++|+|.+++.... ...+++..+..++.||++||+||| +++|+||||||+|||++.++.+||+|||+++......
T Consensus 344 ~~gsL~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 417 (535)
T 2h8h_A 344 SKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 417 (535)
T ss_dssp TTEEHHHHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH
T ss_pred cCCcHHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc
Confidence 9999999997531 234789999999999999999999 7899999999999999999999999999998654321
Q ss_pred CcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccccchhcccc
Q 002061 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
........++..|+|||++.+..++.++|||||||++|||++ |+.||.... .......+. ...
T Consensus 418 -~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~--~~~~~~~i~----~~~--------- 481 (535)
T 2h8h_A 418 -YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV--NREVLDQVE----RGY--------- 481 (535)
T ss_dssp -HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCC--HHHHHHHHH----TTC---------
T ss_pred -eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHH----cCC---------
Confidence 111223456789999999998999999999999999999999 999996531 111111111 110
Q ss_pred ccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCCCC
Q 002061 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCTDK 959 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~ 959 (973)
...........+.+++.+||+.||++|||+.+|++.|+++.....+
T Consensus 482 -~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~ 527 (535)
T 2h8h_A 482 -RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 527 (535)
T ss_dssp -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCSC
T ss_pred -CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccCc
Confidence 0011122345688999999999999999999999999998655443
No 224
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=3.1e-37 Score=362.10 Aligned_cols=253 Identities=27% Similarity=0.310 Sum_probs=204.5
Q ss_pred HHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc---------------ccHHHHHHHHHHHHhcCCCceeeEEE
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---------------DGVKVFAAEMEILGKIRHRNILKLYA 738 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---------------~~~~~~~~E~~~l~~l~hpniv~l~~ 738 (973)
..++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 457899999999999999999999999999999998652 23467889999999999999999999
Q ss_pred EEEeCCeeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCC--
Q 002061 739 CLLKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY-- 816 (973)
Q Consensus 739 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-- 816 (973)
++.++...|+||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~ 185 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINR-----HKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSL 185 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCC
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCC
Confidence 999999999999999999999999764 35899999999999999999999 78999999999999998876
Q ss_pred -CeEEecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHH
Q 002061 817 -EPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWV 895 (973)
Q Consensus 817 -~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~ 895 (973)
.+||+|||++....... ......||+.|+|||++. ..++.++||||+||++|+|++|+.||... +.....
T Consensus 186 ~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~-----~~~~~~ 256 (504)
T 3q5i_A 186 LNIKIVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQ-----NDQDII 256 (504)
T ss_dssp SSEEECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHH
T ss_pred ccEEEEECCCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCC-----CHHHHH
Confidence 69999999998765432 223456999999999986 46899999999999999999999999753 111222
Q ss_pred HHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 896 STHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
......... ............+.+++.+|+++||.+|||+.|++++-.
T Consensus 257 ~~i~~~~~~--------~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~ 304 (504)
T 3q5i_A 257 KKVEKGKYY--------FDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRW 304 (504)
T ss_dssp HHHHHCCCC--------CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred HHHHcCCCC--------CCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHh
Confidence 111111100 000111223456889999999999999999999998643
No 225
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.8e-37 Score=344.57 Aligned_cols=251 Identities=24% Similarity=0.322 Sum_probs=208.0
Q ss_pred HHHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCee
Q 002061 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSS 746 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 746 (973)
.....+|++.+.||+|+||+||+|++..+++.||+|++... ...+.+.+|+.++++++||||+++++++.+++..
T Consensus 37 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 116 (335)
T 2owb_A 37 PRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFV 116 (335)
T ss_dssp TTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred cccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeE
Confidence 34557899999999999999999999999999999998653 3456788999999999999999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCc
Q 002061 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
|+||||+++++|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++
T Consensus 117 ~lv~e~~~~~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 188 (335)
T 2owb_A 117 FVVLELCRRRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 188 (335)
T ss_dssp EEEECCCTTCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEecCCCCCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCc
Confidence 9999999999999998753 35889999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccc
Q 002061 827 KIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||.... ...............
T Consensus 189 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~~- 260 (335)
T 2owb_A 189 TKVEYDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC-----LKETYLRIKKNEYSI- 260 (335)
T ss_dssp EECCSTTC--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHHTCCCC-
T ss_pred eecccCcc--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC-----HHHHHHHHhcCCCCC-
Confidence 87643322 2233568999999999999899999999999999999999999996531 111111111111100
Q ss_pred hhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.......+.+++.+||+.||++||++.|++++
T Consensus 261 -----------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 261 -----------PKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp -----------CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred -----------CccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 01123457789999999999999999999985
No 226
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.2e-37 Score=352.75 Aligned_cols=264 Identities=21% Similarity=0.266 Sum_probs=199.0
Q ss_pred HHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhcCCCceeeEEEEEEe-----------
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLK----------- 742 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~----------- 742 (973)
...+|++.+.||+|+||+||+|++..+++.||||++..... ...+|+++++.++||||+++++++..
T Consensus 5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~--~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 82 (383)
T 3eb0_A 5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR--YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQP 82 (383)
T ss_dssp -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT--SCCHHHHHHTTCCCTTBCCEEEEEEEC----------
T ss_pred ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc--hHHHHHHHHHHcCCCCccchhheeeecCccccccccc
Confidence 34689999999999999999999999999999998865432 23579999999999999999999844
Q ss_pred ---------------------------CCeeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhc
Q 002061 743 ---------------------------GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHD 795 (973)
Q Consensus 743 ---------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~ 795 (973)
....++||||++ |+|.+.+..... ....+++..+..++.|+++||+|||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH-- 158 (383)
T 3eb0_A 83 PDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIR-SGRSIPMNLISIYIYQLFRAVGFIH-- 158 (383)
T ss_dssp ---------------------------CCEEEEEECCCS-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH--
T ss_pred ccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHH--
Confidence 334789999997 688888876432 3456899999999999999999999
Q ss_pred CCCCeEecCCCCCCeeec-CCCCeEEecccCcccccCCCCcccccccCCccccccccccccC-CCCccchHHHHHHHHHH
Q 002061 796 CSPPIIHRDIKSSNILLD-EDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLE 873 (973)
Q Consensus 796 ~~~~ivH~Dlkp~Nill~-~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~e 873 (973)
+.+|+||||||+||+++ .++.+||+|||+++....... .....||+.|+|||++.+. .++.++||||+||++||
T Consensus 159 -~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e 234 (383)
T 3eb0_A 159 -SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGE 234 (383)
T ss_dssp -TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred -HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC---CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHH
Confidence 88999999999999998 688999999999986644322 2235689999999998765 48999999999999999
Q ss_pred HHhCCCCCCcccCCcccHHHHHHHHhcc---------ccccchhccccccCc-----chHHHHHHHHHHHHHhcCCCCCC
Q 002061 874 LVTGRKPVEEEYGDGKDIVYWVSTHLNN---------HENVLKVLDCEVASE-----SIKEDMIKLLKIAVVCTTKLPNL 939 (973)
Q Consensus 874 l~tg~~pf~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~-----~~~~~~~~l~~l~~~cl~~dP~~ 939 (973)
|++|+.||..... .......+.. ... .+...+...+..... .+......+.+++.+||++||++
T Consensus 235 ll~g~~pf~~~~~-~~~~~~i~~~-~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 312 (383)
T 3eb0_A 235 LILGKPLFSGETS-IDQLVRIIQI-MGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDL 312 (383)
T ss_dssp HHHSSCSSCCSSH-HHHHHHHHHH-HCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGG
T ss_pred HHhCCCCCCCCCh-HHHHHHHHHH-hCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhh
Confidence 9999999975411 1111111110 000 000000000111111 11123456889999999999999
Q ss_pred CCCHHHHHHH
Q 002061 940 RPPMREVVKM 949 (973)
Q Consensus 940 Rpt~~evl~~ 949 (973)
|||+.|+++|
T Consensus 313 R~t~~e~l~h 322 (383)
T 3eb0_A 313 RINPYEAMAH 322 (383)
T ss_dssp SCCHHHHHTS
T ss_pred CCCHHHHhcC
Confidence 9999999975
No 227
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.2e-37 Score=344.82 Aligned_cols=258 Identities=20% Similarity=0.207 Sum_probs=204.4
Q ss_pred HHHHcCCccc-CcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCe
Q 002061 672 AEQICNLEED-NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGS 745 (973)
Q Consensus 672 ~~~~~~~~~~-~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~ 745 (973)
+...++|.+. +.||+|+||+||+|++..+++.||||++... .....+.+|+.+++++ +||||+++++++..++.
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~ 103 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE 103 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe
Confidence 3445567776 8899999999999999999999999998752 3456788999999999 56999999999999999
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecC---CCCeEEec
Q 002061 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE---DYEPKIAD 822 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~D 822 (973)
.++||||+++|+|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|
T Consensus 104 ~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~D 177 (327)
T 3lm5_A 104 IILILEYAAGGEIFSLCLPE---LAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVD 177 (327)
T ss_dssp EEEEEECCTTEEGGGGGSSC---C-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECC
T ss_pred EEEEEEecCCCcHHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEee
Confidence 99999999999999988532 2356899999999999999999999 789999999999999998 78999999
Q ss_pred ccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccc
Q 002061 823 FGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH 902 (973)
Q Consensus 823 fgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 902 (973)
||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.... ............
T Consensus 178 fg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~i~~~~ 249 (327)
T 3lm5_A 178 FGMSRKIGHACE---LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED-----NQETYLNISQVN 249 (327)
T ss_dssp GGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTC
T ss_pred CccccccCCccc---cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----chHHHHHHHhcc
Confidence 999986654322 233568999999999999999999999999999999999999996531 111111111111
Q ss_pred cccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 903 ENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
. .............+.+++.+|++.||++|||+.|++++-.
T Consensus 250 ~--------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~ 290 (327)
T 3lm5_A 250 V--------DYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSW 290 (327)
T ss_dssp C--------CCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGG
T ss_pred c--------ccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHh
Confidence 0 0111112233456888999999999999999999998744
No 228
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=3.1e-37 Score=354.49 Aligned_cols=198 Identities=27% Similarity=0.376 Sum_probs=168.1
Q ss_pred cCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeC-----Cee
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKG-----GSS 746 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~~ 746 (973)
++|++.+.||+|+||+||+|++..+++.||||++... ...+++.+|++++++++||||+++++++... ...
T Consensus 26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 105 (432)
T 3n9x_A 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL 105 (432)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence 5799999999999999999999999999999998652 3456788999999999999999999999766 578
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCc
Q 002061 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
|+||||++ |+|.+++.. ...+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 106 ~lv~e~~~-~~L~~~~~~-----~~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 106 YIVLEIAD-SDLKKLFKT-----PIFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp EEEEECCS-EEHHHHHHS-----SCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEecCC-cCHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 99999995 699999874 245899999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCc--------------------ccccccCCcccccccccc-ccCCCCccchHHHHHHHHHHHHhCCCCCC
Q 002061 827 KIAENSPKV--------------------SDYSCFAGTHGYIAPELA-YTCKVSEKSDVFSFGVVLLELVTGRKPVE 882 (973)
Q Consensus 827 ~~~~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~~l~el~tg~~pf~ 882 (973)
+........ ......+||+.|+|||++ .+..++.++||||+||++|||++|..||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 876543211 122456789999999986 56679999999999999999999766664
No 229
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=6.3e-38 Score=349.01 Aligned_cols=255 Identities=23% Similarity=0.313 Sum_probs=187.8
Q ss_pred cCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc--ccHHHHHHHHHHHHhcC-CCceeeEEEEEE--------eCC
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIR-HRNILKLYACLL--------KGG 744 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~-hpniv~l~~~~~--------~~~ 744 (973)
.+|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|+.+++++. ||||+++++++. ...
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 4789999999999999999999988999999988553 34566889999999996 999999999984 234
Q ss_pred eeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCC--eEecCCCCCCeeecCCCCeEEec
Q 002061 745 SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPP--IIHRDIKSSNILLDEDYEPKIAD 822 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~Dlkp~Nill~~~~~~kl~D 822 (973)
..++||||++ |+|.+++.... ....+++..+..++.|++.||+||| +.+ |+||||||+||+++.++.+||+|
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKME--SRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHHH--TTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred eEEEEEEecC-CCHHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEec
Confidence 5799999995 79999997642 2345899999999999999999999 777 99999999999999999999999
Q ss_pred ccCcccccCCCCcc----------cccccCCcccccccccc---ccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcc
Q 002061 823 FGVAKIAENSPKVS----------DYSCFAGTHGYIAPELA---YTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGK 889 (973)
Q Consensus 823 fgl~~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~ 889 (973)
||+++......... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||.....
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--- 258 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK--- 258 (337)
T ss_dssp CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH---
Confidence 99998765432211 11134589999999998 566789999999999999999999999965311
Q ss_pred cHHHHHHHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002061 890 DIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
.......... .........+.+++.+||+.||++||++.|++++|+++..
T Consensus 259 --~~~~~~~~~~--------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~ 308 (337)
T 3ll6_A 259 --LRIVNGKYSI--------------PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA 308 (337)
T ss_dssp ---------CCC--------------CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --HHhhcCcccC--------------CcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0111110000 0001112236789999999999999999999999998754
No 230
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=4.4e-37 Score=346.25 Aligned_cols=261 Identities=26% Similarity=0.281 Sum_probs=195.5
Q ss_pred HHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCC-----
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGG----- 744 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----- 744 (973)
..++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|+.+++.++||||+++++++...+
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 356899999999999999999999999999999998652 33456789999999999999999999997654
Q ss_pred -eeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecc
Q 002061 745 -SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADF 823 (973)
Q Consensus 745 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 823 (973)
..|+||||++ |+|.+++.. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 103 ~~~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Df 171 (371)
T 2xrw_A 103 QDVYIVMELMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDF 171 (371)
T ss_dssp CEEEEEEECCS-EEHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCC
T ss_pred cceEEEEEcCC-CCHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEe
Confidence 7899999996 588888752 3788999999999999999999 789999999999999999999999999
Q ss_pred cCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHH------
Q 002061 824 GVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVST------ 897 (973)
Q Consensus 824 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~------ 897 (973)
|+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||..... .+....+..
T Consensus 172 g~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~i~~~~~~~~ 246 (371)
T 2xrw_A 172 GLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH--IDQWNKVIEQLGTPC 246 (371)
T ss_dssp CC-------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHC-CCCCC
T ss_pred eccccccccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCC
Confidence 9998654321 22335689999999999999999999999999999999999999975311 110000000
Q ss_pred -------------Hhcccccc-----chhccc---cccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 898 -------------HLNNHENV-----LKVLDC---EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 898 -------------~~~~~~~~-----~~~~~~---~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.....+.. ...... .............+.+++.+|++.||++|||+.|+++|-
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 320 (371)
T 2xrw_A 247 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 320 (371)
T ss_dssp HHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred HHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCc
Confidence 00000000 000000 001112233466789999999999999999999999975
No 231
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=5.7e-37 Score=334.43 Aligned_cols=254 Identities=22% Similarity=0.316 Sum_probs=200.6
Q ss_pred CCcccCcccccCceEEEEEEecCCCcEEEEEeeecc--ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEEccC
Q 002061 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
+|.....||+|+||+||+|++..+++.||||++... ...+.+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 455566899999999999999999999999998763 345678899999999999999999999999999999999999
Q ss_pred CCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecC-CCCeEEecccCcccccCCC
Q 002061 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE-DYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~Dfgl~~~~~~~~ 833 (973)
+++|.+++... .....+++..+..++.|++.||+||| +.+++||||||+||+++. ++.+||+|||.+.......
T Consensus 103 ~~~L~~~l~~~--~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~ 177 (295)
T 2clq_A 103 GGSLSALLRSK--WGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN 177 (295)
T ss_dssp EEEHHHHHHHT--TCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--
T ss_pred CCCHHHHHHhh--ccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC
Confidence 99999999764 22335678889999999999999999 789999999999999987 8999999999998664322
Q ss_pred CcccccccCCccccccccccccCC--CCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhccc
Q 002061 834 KVSDYSCFAGTHGYIAPELAYTCK--VSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDC 911 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
. ......|++.|+|||++.+.. ++.++||||||+++|+|++|+.||..... ...............
T Consensus 178 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~-------- 245 (295)
T 2clq_A 178 P--CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE--PQAAMFKVGMFKVHP-------- 245 (295)
T ss_dssp -----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSS--HHHHHHHHHHHCCCC--------
T ss_pred C--cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCc--hhHHHHhhccccccc--------
Confidence 1 123356899999999987643 88999999999999999999999975321 111111111111111
Q ss_pred cccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 912 EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 912 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
. .+......+.+++.+||+.||++||++.|++++-.
T Consensus 246 ~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~ 281 (295)
T 2clq_A 246 E----IPESMSAEAKAFILKCFEPDPDKRACANDLLVDEF 281 (295)
T ss_dssp C----CCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGG
T ss_pred c----ccccCCHHHHHHHHHHccCChhhCCCHHHHhcChh
Confidence 1 11123456788999999999999999999997644
No 232
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=2.8e-37 Score=345.72 Aligned_cols=267 Identities=21% Similarity=0.268 Sum_probs=203.8
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEe--------
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLK-------- 742 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-------- 742 (973)
.++|++.+.||+|+||+||+|++..+++.||||++... .....+.+|++++++++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 56899999999999999999999999999999988552 234567899999999999999999999877
Q ss_pred CCeeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEec
Q 002061 743 GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIAD 822 (973)
Q Consensus 743 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 822 (973)
++..|+||||++ |+|.+.+... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|
T Consensus 96 ~~~~~lv~e~~~-~~l~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~D 167 (351)
T 3mi9_A 96 KGSIYLVFDFCE-HDLAGLLSNV----LVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLAD 167 (351)
T ss_dssp -CEEEEEEECCS-EEHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECC
T ss_pred CceEEEEEeccC-CCHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEcc
Confidence 446899999996 5888877643 345899999999999999999999 78999999999999999999999999
Q ss_pred ccCcccccCCCC--cccccccCCcccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHh
Q 002061 823 FGVAKIAENSPK--VSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHL 899 (973)
Q Consensus 823 fgl~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~ 899 (973)
||+++....... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.... .......+....
T Consensus 168 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~i~~~~ 245 (351)
T 3mi9_A 168 FGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT--EQHQLALISQLC 245 (351)
T ss_dssp CTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHH
T ss_pred chhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHh
Confidence 999987653221 222344578999999999876 458999999999999999999999997541 112222222111
Q ss_pred cccc-ccchhcc----------ccccCcchHH------HHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 900 NNHE-NVLKVLD----------CEVASESIKE------DMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 900 ~~~~-~~~~~~~----------~~~~~~~~~~------~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.... ......+ .........+ ....+.+++.+|++.||++|||+.|++++-.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 314 (351)
T 3mi9_A 246 GSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 314 (351)
T ss_dssp CCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred CCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCC
Confidence 1110 0000000 0000000111 1345789999999999999999999999754
No 233
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.9e-38 Score=345.42 Aligned_cols=263 Identities=28% Similarity=0.382 Sum_probs=206.9
Q ss_pred HcCCcccCcccccCceEEEEEEe----cCCCcEEEEEeeecc--ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCC--ee
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDL----KKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGG--SS 746 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~----~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--~~ 746 (973)
..+|++.+.||+|+||+||+|+. ..+++.||||++... ...+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 35688999999999999999994 567899999998653 34567899999999999999999999986643 78
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCc
Q 002061 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
++||||+++|+|.+++... ...+++..+..++.|+++||+||| +.+++||||||+||+++.++.+||+|||++
T Consensus 120 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~ 192 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLT 192 (326)
T ss_dssp EEEECCCTTCBHHHHHHHS----TTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred EEEEECCCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcch
Confidence 9999999999999999764 345899999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCccc-ccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccC-------Cc---ccHHHHH
Q 002061 827 KIAENSPKVSD-YSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYG-------DG---KDIVYWV 895 (973)
Q Consensus 827 ~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~-------~~---~~~~~~~ 895 (973)
........... .....++..|+|||++.+..++.++||||||+++|||++|..||..... .. ......+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (326)
T 2w1i_A 193 KVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 272 (326)
T ss_dssp EECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHH
T ss_pred hhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHH
Confidence 87654432211 2234577889999999988899999999999999999999999864310 00 0000011
Q ss_pred HHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002061 896 STHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
....... .....+......+.+++.+||+.||++||++.|+++.|+++.
T Consensus 273 ~~~~~~~----------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 273 IELLKNN----------GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp HHHHHTT----------CCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHhhcC----------CCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1111110 001112233456889999999999999999999999998753
No 234
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=3.3e-37 Score=332.74 Aligned_cols=247 Identities=25% Similarity=0.368 Sum_probs=197.1
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
.++|++.+.||+|+||.||+|++..+++.||||++... ...+.+.+|+++++.++||||+++++++..++..|+|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 46889999999999999999999988999999998653 3456788999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccc
Q 002061 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++++|.+++... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++...
T Consensus 90 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~ 161 (276)
T 2h6d_A 90 MEYVSGGELFDYICKH-----GRVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM 161 (276)
T ss_dssp EECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCC
T ss_pred EeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeeccccccc
Confidence 9999999999999764 24789999999999999999999 779999999999999999999999999999766
Q ss_pred cCCCCcccccccCCccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchh
Q 002061 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKV-SEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
..... .....|++.|+|||++.+..+ +.++||||+|+++|+|++|+.||... ................
T Consensus 162 ~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~-----~~~~~~~~~~~~~~~~--- 230 (276)
T 2h6d_A 162 SDGEF---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE-----HVPTLFKKIRGGVFYI--- 230 (276)
T ss_dssp CC----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCC---
T ss_pred CCCcc---eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC-----cHHHHHHHhhcCcccC---
Confidence 44321 223468999999999987765 58999999999999999999999653 1112211111111100
Q ss_pred ccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
+......+.+++.+|++.||++||++.|++++
T Consensus 231 ---------~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 231 ---------PEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp ---------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ---------chhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11123457889999999999999999999986
No 235
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2.5e-37 Score=343.08 Aligned_cols=261 Identities=21% Similarity=0.225 Sum_probs=203.1
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhcC-CCceeeEEEEEEe--CCeeEEEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIR-HRNILKLYACLLK--GGSSFLVLE 751 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~--~~~~~lv~e 751 (973)
.++|++.+.||+|+||+||+|++..+++.||||++.. ...+.+.+|++++++++ ||||+++++++.. ....++|||
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~-~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e 113 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP-VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE 113 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc-cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEe
Confidence 4679999999999999999999999999999999864 34567899999999997 9999999999987 667899999
Q ss_pred ccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCC-CeEEecccCccccc
Q 002061 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY-EPKIADFGVAKIAE 830 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfgl~~~~~ 830 (973)
|+++++|.+++. .+++..+..++.|++.||+||| +++|+||||||+||+++.++ .+||+|||+++...
T Consensus 114 ~~~~~~l~~~~~--------~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~ 182 (330)
T 3nsz_A 114 HVNNTDFKQLYQ--------TLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 182 (330)
T ss_dssp CCCCCCHHHHGG--------GCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred ccCchhHHHHHH--------hCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence 999999988875 2788899999999999999999 78999999999999999777 89999999998665
Q ss_pred CCCCcccccccCCcccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHh----------
Q 002061 831 NSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHL---------- 899 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~---------- 899 (973)
.... .....|+..|+|||++.+ ..++.++||||+||++|||++|+.||..................
T Consensus 183 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 259 (330)
T 3nsz_A 183 PGQE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 259 (330)
T ss_dssp TTCC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CCCc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHH
Confidence 4322 233568999999999877 67899999999999999999999999543222111111111000
Q ss_pred --cc-ccccchhc--------cccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 900 --NN-HENVLKVL--------DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 900 --~~-~~~~~~~~--------~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.. .+...... ...............+.+++.+|+++||++|||+.|+++|-
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp 321 (330)
T 3nsz_A 260 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 321 (330)
T ss_dssp TTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSG
T ss_pred hccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCc
Confidence 00 00000000 00001111122356788999999999999999999999863
No 236
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.2e-37 Score=364.31 Aligned_cols=253 Identities=28% Similarity=0.370 Sum_probs=207.7
Q ss_pred HHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeec-----cccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEE
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~-----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
..++|++.+.||+|+||+||+|++..+++.||||++.. ....+.+.+|++++++++||||+++++++...+..|+
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 45679999999999999999999999999999999864 2456778999999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeee---cCCCCeEEecccC
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL---DEDYEPKIADFGV 825 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfgl 825 (973)
||||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||++ +.++.+||+|||+
T Consensus 104 v~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~ 175 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISR-----KRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGL 175 (484)
T ss_dssp EECCCCSCBHHHHHHTC-----SCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTH
T ss_pred EEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeee
Confidence 99999999999998743 45889999999999999999999 7899999999999999 5678999999999
Q ss_pred cccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhcccccc
Q 002061 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
++....... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||... .... ...........
T Consensus 176 a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~---~~~~i~~~~~~- 245 (484)
T 3nyv_A 176 STHFEASKK---MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGA--NEYD---ILKKVEKGKYT- 245 (484)
T ss_dssp HHHBCCCCS---HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHH---HHHHHHHCCCC-
T ss_pred eEEcccccc---cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCC--CHHH---HHHHHHcCCCC-
Confidence 987654422 233569999999999876 6899999999999999999999999754 1111 11111111100
Q ss_pred chhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
............+.+++.+|+++||.+|||+.|+++|-.
T Consensus 246 -------~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~ 284 (484)
T 3nyv_A 246 -------FELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEW 284 (484)
T ss_dssp -------CCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHH
T ss_pred -------CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChh
Confidence 011112233456889999999999999999999998654
No 237
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1e-37 Score=347.08 Aligned_cols=267 Identities=24% Similarity=0.299 Sum_probs=197.5
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHH--HHhcCCCceeeEEEEEEe-----CCeeE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEI--LGKIRHRNILKLYACLLK-----GGSSF 747 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~--l~~l~hpniv~l~~~~~~-----~~~~~ 747 (973)
.++|++.+.||+|+||+||+|+.. ++.||||++.... ...+..|.++ +..++||||+++++++.. ....+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~-~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 88 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSLD--ERPVAVKVFSFAN-RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL 88 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEET--TEEEEEEEEEGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred hHHhheeeecccCCCeEEEEEEEC--CeEEEEEEeeccc-hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence 468999999999999999999874 7899999986543 3344455555 445899999999986543 23568
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCC---------CeEecCCCCCCeeecCCCCe
Q 002061 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSP---------PIIHRDIKSSNILLDEDYEP 818 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~---------~ivH~Dlkp~Nill~~~~~~ 818 (973)
+||||+++|+|.+++... ..++..+..++.|+++||+||| +. +|+||||||+||+++.++.+
T Consensus 89 lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 159 (336)
T 3g2f_A 89 LVMEYYPNGSLXKYLSLH------TSDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159 (336)
T ss_dssp EEECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred EEEecCCCCcHHHHHhhc------ccchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcE
Confidence 999999999999999754 3488899999999999999999 67 99999999999999999999
Q ss_pred EEecccCcccccCCCC------cccccccCCcccccccccccc-------CCCCccchHHHHHHHHHHHHhCCCCCCccc
Q 002061 819 KIADFGVAKIAENSPK------VSDYSCFAGTHGYIAPELAYT-------CKVSEKSDVFSFGVVLLELVTGRKPVEEEY 885 (973)
Q Consensus 819 kl~Dfgl~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslG~~l~el~tg~~pf~~~~ 885 (973)
||+|||+++....... ........||+.|+|||++.+ ..++.++|||||||++|||++|..||....
T Consensus 160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~ 239 (336)
T 3g2f_A 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239 (336)
T ss_dssp EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTS
T ss_pred EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCcc
Confidence 9999999987643321 112224569999999999876 456778999999999999999987764321
Q ss_pred CCcc-------------cHHHHHHHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002061 886 GDGK-------------DIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 886 ~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
.... ....+.. ..........+ ... ..........+.+++.+||+.||++|||+.|+++.|++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ 315 (336)
T 3g2f_A 240 SVPEYQMAFQTEVGNHPTFEDMQV-LVSREKQRPKF-PEA--WKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAE 315 (336)
T ss_dssp CCCCCCCTTHHHHCSSCCHHHHHH-HHTTSCCCCCC-CTT--CCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred chhHHHHhhhcccCCCchHHHHHh-hhcccccCCCC-Ccc--cccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHH
Confidence 1110 0111100 00000000000 000 01123456679999999999999999999999999998
Q ss_pred CCCCC
Q 002061 953 ADPCT 957 (973)
Q Consensus 953 ~~~~~ 957 (973)
+....
T Consensus 316 ll~~~ 320 (336)
T 3g2f_A 316 LMMIW 320 (336)
T ss_dssp HHHCC
T ss_pred HHHHH
Confidence 76444
No 238
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-37 Score=348.45 Aligned_cols=256 Identities=25% Similarity=0.286 Sum_probs=204.8
Q ss_pred HHcCCcccCcccccCceEEEEEEec---CCCcEEEEEeeecc------ccHHHHHHHHHHHHhc-CCCceeeEEEEEEeC
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLK---KNAGTVAVKQLWKG------DGVKVFAAEMEILGKI-RHRNILKLYACLLKG 743 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~---~~~~~vavK~~~~~------~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~ 743 (973)
...+|++.+.||+|+||+||+|+.. .+++.||||++... ...+.+.+|+++++++ +||||+++++++..+
T Consensus 52 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 131 (355)
T 1vzo_A 52 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE 131 (355)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred cccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeC
Confidence 3568999999999999999999984 47899999988642 2345677899999999 699999999999999
Q ss_pred CeeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecc
Q 002061 744 GSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADF 823 (973)
Q Consensus 744 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 823 (973)
...++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 132 ~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Df 203 (355)
T 1vzo_A 132 TKLHLILDYINGGELFTHLSQR-----ERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDF 203 (355)
T ss_dssp TEEEEEECCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCS
T ss_pred ceEEEEeecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeC
Confidence 9999999999999999999864 25889999999999999999999 789999999999999999999999999
Q ss_pred cCcccccCCCCcccccccCCcccccccccccc--CCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhcc
Q 002061 824 GVAKIAENSPKVSDYSCFAGTHGYIAPELAYT--CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNN 901 (973)
Q Consensus 824 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 901 (973)
|+++....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .............
T Consensus 204 G~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~ 281 (355)
T 1vzo_A 204 GLSKEFVADET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK-NSQAEISRRILKS 281 (355)
T ss_dssp SEEEECCGGGG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC-CCHHHHHHHHHHC
T ss_pred CCCeecccCCC-CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCcc-chHHHHHHHHhcc
Confidence 99976543221 12233569999999999985 34789999999999999999999999754221 2222222222211
Q ss_pred ccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHhh
Q 002061 902 HENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRP-----PMREVVKMLA 951 (973)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~L~ 951 (973)
... .+......+.+++.+||+.||.+|| ++.|++++..
T Consensus 282 ~~~------------~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~ 324 (355)
T 1vzo_A 282 EPP------------YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLF 324 (355)
T ss_dssp CCC------------CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGG
T ss_pred CCC------------CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcc
Confidence 111 1112334578899999999999999 9999998864
No 239
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4e-37 Score=343.39 Aligned_cols=267 Identities=24% Similarity=0.276 Sum_probs=199.8
Q ss_pred HHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc-------cHHHHHHHHHHHHhcCCCceeeEEEEEEeCCee
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-------GVKVFAAEMEILGKIRHRNILKLYACLLKGGSS 746 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 746 (973)
...+|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++...+..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 4568999999999999999999999999999999986421 124678999999999999999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCc
Q 002061 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
++||||+++ +|.+++... ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 88 ~lv~e~~~~-~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDN----SLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLA 159 (346)
T ss_dssp EEEEECCSE-EHHHHHTTC----CSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGG
T ss_pred EEEEEcCCC-CHHHHHHhc----CcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccc
Confidence 999999975 888888643 345788889999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCcccccccCCccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccc-cc
Q 002061 827 KIAENSPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH-EN 904 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~-~~ 904 (973)
+....... ......||+.|+|||++.+. .++.++||||+||++|||++|..||..... ............... ..
T Consensus 160 ~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~-~~~~~~i~~~~~~~~~~~ 236 (346)
T 1ua2_A 160 KSFGSPNR--AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD-LDQLTRIFETLGTPTEEQ 236 (346)
T ss_dssp STTTSCCC--CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCTTT
T ss_pred eeccCCcc--cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHHcCCCChhh
Confidence 86643322 22345689999999998764 588999999999999999999999965411 111111111110000 00
Q ss_pred cc------hhccc-cccC----cchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 905 VL------KVLDC-EVAS----ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 905 ~~------~~~~~-~~~~----~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.. +.... .... .........+.+++.+|++.||++|||+.|++++-.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~ 294 (346)
T 1ua2_A 237 WPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 294 (346)
T ss_dssp SSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGG
T ss_pred hhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChh
Confidence 00 00000 0000 001223467889999999999999999999999854
No 240
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=3.2e-37 Score=337.05 Aligned_cols=265 Identities=23% Similarity=0.301 Sum_probs=203.7
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
+++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++..++..|+||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 46789999999999999999999988999999988653 23467889999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccccc
Q 002061 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||++ |+|.+++... ....+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||.+....
T Consensus 82 e~~~-~~L~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 154 (299)
T 2r3i_A 82 EFLH-QDLKKFMDAS---ALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154 (299)
T ss_dssp ECCS-EEHHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHC
T ss_pred Eccc-CCHHHHHHhh---hccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhcc
Confidence 9996 6999999754 2345788999999999999999999 7899999999999999999999999999997664
Q ss_pred CCCCcccccccCCccccccccccccCC-CCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccc-c-ch
Q 002061 831 NSPKVSDYSCFAGTHGYIAPELAYTCK-VSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN-V-LK 907 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~-~-~~ 907 (973)
.... ......+|+.|+|||++.+.. ++.++|||||||++|+|++|+.||.... ..+....+......... . ..
T Consensus 155 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~ 230 (299)
T 2r3i_A 155 VPVR--TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDS--EIDQLFRIFRTLGTPDEVVWPG 230 (299)
T ss_dssp CCSB--CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCTTTSTT
T ss_pred CCcc--ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCcc--HHHHHHHHHHHhCCCchhhhhH
Confidence 3321 223346899999999988765 7899999999999999999999997542 11111111111111000 0 00
Q ss_pred -----hccccc---cCcc----hHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 908 -----VLDCEV---ASES----IKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 908 -----~~~~~~---~~~~----~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
...+.. .... .......+.+++.+|++.||++|||+.|++++-
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp 285 (299)
T 2r3i_A 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 285 (299)
T ss_dssp GGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSG
T ss_pred hhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCh
Confidence 000000 0000 112345688999999999999999999999853
No 241
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.3e-37 Score=340.84 Aligned_cols=256 Identities=22% Similarity=0.340 Sum_probs=202.6
Q ss_pred HHHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeec--cccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEE
Q 002061 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK--GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
....++|++.+.||+|+||+||+|++..+++.||+|++.. ....+.+.+|++++++++||||+++++++..++..++|
T Consensus 15 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 94 (302)
T 2j7t_A 15 LDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94 (302)
T ss_dssp SCGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred cCCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence 3445789999999999999999999999999999998865 34567889999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccc
Q 002061 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++++|.+++... ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++...
T Consensus 95 ~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 167 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLEL----DRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKN 167 (302)
T ss_dssp EECCTTEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHH
T ss_pred EEeCCCCcHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCccc
Confidence 9999999999998754 235899999999999999999999 789999999999999999999999999987543
Q ss_pred cCCCCcccccccCCcccccccccc-----ccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccc
Q 002061 830 ENSPKVSDYSCFAGTHGYIAPELA-----YTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
.... .......||+.|+|||++ .+..++.++||||||+++|+|++|+.||.... ..............
T Consensus 168 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~ 240 (302)
T 2j7t_A 168 LKTL--QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN-----PMRVLLKIAKSDPP 240 (302)
T ss_dssp HHHH--HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSCCC
T ss_pred cccc--cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC-----HHHHHHHHhccCCc
Confidence 2110 111234689999999998 36678999999999999999999999997531 11111111111110
Q ss_pred cchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.. .........+.+++.+||+.||++|||+.|++++-
T Consensus 241 --~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~ 277 (302)
T 2j7t_A 241 --TL-------LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHP 277 (302)
T ss_dssp --CC-------SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTST
T ss_pred --cc-------CCccccCHHHHHHHHHHcccChhhCCCHHHHhcCh
Confidence 00 01122345688999999999999999999998763
No 242
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=345.04 Aligned_cols=254 Identities=26% Similarity=0.367 Sum_probs=198.0
Q ss_pred HHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-ccHHHHHHHHHHHHhc-CCCceeeEEEEEEe------CC
Q 002061 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKI-RHRNILKLYACLLK------GG 744 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~------~~ 744 (973)
...++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|+++++++ +||||+++++++.. ..
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~ 100 (326)
T 2x7f_A 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 100 (326)
T ss_dssp CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCC
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccc
Confidence 3457899999999999999999999988999999998653 4556789999999999 89999999999976 46
Q ss_pred eeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEeccc
Q 002061 745 SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFG 824 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 824 (973)
..|+||||+++|+|.+++... ....+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg 174 (326)
T 2x7f_A 101 QLWLVMEFCGAGSVTDLIKNT---KGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFG 174 (326)
T ss_dssp EEEEEEECCTTEEHHHHHHHS---GGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCT
T ss_pred eEEEEEEcCCCCcHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEEeeCc
Confidence 789999999999999999864 2345888999999999999999999 7899999999999999999999999999
Q ss_pred CcccccCCCCcccccccCCccccccccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHh
Q 002061 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAY-----TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHL 899 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~ 899 (973)
++........ ......||+.|+|||++. +..++.++|||||||++|+|++|+.||.... .........
T Consensus 175 ~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~ 247 (326)
T 2x7f_A 175 VSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH-----PMRALFLIP 247 (326)
T ss_dssp TTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHH
T ss_pred CceecCcCcc--ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc-----HHHHHHHhh
Confidence 9876543211 123356899999999986 5678999999999999999999999996431 111111111
Q ss_pred ccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 900 NNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.... +.. ........+.+++.+||+.||.+||++.|++++
T Consensus 248 ~~~~-------~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 248 RNPA-------PRL---KSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HSCC-------CCC---SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cCcc-------ccC---CccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 1100 000 011123468889999999999999999999985
No 243
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=6.1e-38 Score=353.57 Aligned_cols=253 Identities=9% Similarity=-0.025 Sum_probs=181.5
Q ss_pred cCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc-----cHHHHHHHHHHHHhc--CCCceeeEE-------EEEE
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----GVKVFAAEMEILGKI--RHRNILKLY-------ACLL 741 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l--~hpniv~l~-------~~~~ 741 (973)
.+|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|+++++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 35888999999999999999999999999999987632 345567785544444 699988755 4544
Q ss_pred eC-----------------CeeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHH------HHHHHHHHHHHhhhhhcCCC
Q 002061 742 KG-----------------GSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRR------YKIALGAAKGIAYLHHDCSP 798 (973)
Q Consensus 742 ~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~------~~i~~~ia~~l~~LH~~~~~ 798 (973)
.+ ...|+||||++ |+|.+++..... .+.+..+ ..++.|+++||+||| ++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~ 213 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF----VYVFRGDEGILALHILTAQLIRLAANLQ---SK 213 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHHHH---HT
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc----ccchhhhhhhhhHHHHHHHHHHHHHHHH---HC
Confidence 33 33799999998 899999986522 2233444 677899999999999 78
Q ss_pred CeEecCCCCCCeeecCCCCeEEecccCcccccCCCCcccccccCCcccccccccccc--CCCCccchHHHHHHHHHHHHh
Q 002061 799 PIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYT--CKVSEKSDVFSFGVVLLELVT 876 (973)
Q Consensus 799 ~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~~l~el~t 876 (973)
+|+||||||+|||++.++.+||+|||+++..... .....+|+.|+|||++.+ ..++.++|||||||++|||++
T Consensus 214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~ellt 288 (371)
T 3q60_A 214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWC 288 (371)
T ss_dssp TEEETTCSGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCccCcCCHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHh
Confidence 9999999999999999999999999999865422 113456799999999987 679999999999999999999
Q ss_pred CCCCCCcccCCcccHHHHHHHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 877 GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 877 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
|+.||......... ..........................+.+++.+||+.||++|||+.|+++|
T Consensus 289 g~~Pf~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 289 LFLPFGLVTPGIKG--------SWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp SSCSTTBCCTTCTT--------CCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred CCCCCCCcCccccc--------chhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 99999765221110 000000000001111111112334568899999999999999999999864
No 244
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=3.8e-37 Score=371.12 Aligned_cols=250 Identities=27% Similarity=0.347 Sum_probs=207.4
Q ss_pred HHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeec-----cccHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCee
Q 002061 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-----GDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSS 746 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~-----~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 746 (973)
..+.+|++.+.||+|+||+||+|++..+++.||||++.+ ....+.+.+|..++..+ +||+|+++++++.+.+..
T Consensus 338 ~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~ 417 (674)
T 3pfq_A 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 417 (674)
T ss_dssp --CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred ccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence 345789999999999999999999999999999999875 23456678899999987 799999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCc
Q 002061 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
|+||||+++|+|.+++... ..+++..+..++.||+.||+||| +++||||||||+|||++.++.+||+|||++
T Consensus 418 ~lV~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla 489 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMC 489 (674)
T ss_dssp EEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTC
T ss_pred EEEEeCcCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeeccee
Confidence 9999999999999999864 35899999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccc
Q 002061 827 KIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||... +..............
T Consensus 490 ~~~~~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~-----~~~~~~~~i~~~~~~-- 560 (674)
T 3pfq_A 490 KENIWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE-----DEDELFQSIMEHNVA-- 560 (674)
T ss_dssp EECCCTT--CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHSSCCC--
T ss_pred eccccCC--cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCC-----CHHHHHHHHHhCCCC--
Confidence 8543222 1233467999999999999999999999999999999999999999753 222222222222111
Q ss_pred hhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHH
Q 002061 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPM-----REVVKM 949 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~-----~evl~~ 949 (973)
.+.....++.+++.+||+.||++||++ .||++|
T Consensus 561 ----------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 561 ----------YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp ----------CCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred ----------CCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 111234568889999999999999997 788765
No 245
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=7.3e-38 Score=340.75 Aligned_cols=260 Identities=26% Similarity=0.340 Sum_probs=198.4
Q ss_pred HcCCcccCcccccCceEEEEEEecC-CC--cEEEEEeeecc-----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCee
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKK-NA--GTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSS 746 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~-~~--~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 746 (973)
.++|++.+.||+|+||+||+|++.. ++ ..||||++... ...+.+.+|++++++++||||+++++++..+. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 3578999999999999999998753 23 36999988642 34567889999999999999999999988765 8
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCc
Q 002061 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
++||||+++|+|.+++... ...+++..+..++.|+++||+||| +++++||||||+||+++.++.+||+|||++
T Consensus 96 ~~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~ 168 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKH----QGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLM 168 (291)
T ss_dssp EEEEECCTTCBHHHHHHHH----GGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred eeeEecccCCCHHHHHHhc----cCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEcccccc
Confidence 8999999999999999864 235889999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCcc-cccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccc
Q 002061 827 KIAENSPKVS-DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 827 ~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
.......... ......+|..|+|||++.+..++.++||||||+++|||++ |+.||.... ..............
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~~~~~~~~~~~~~ 243 (291)
T 1u46_A 169 RALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN-----GSQILHKIDKEGER 243 (291)
T ss_dssp EECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHHHHTSCCC
T ss_pred ccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCC-----HHHHHHHHHccCCC
Confidence 8765433221 2223457889999999998889999999999999999999 999996541 12222222111110
Q ss_pred cchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCC
Q 002061 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCT 957 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 957 (973)
..........+.+++.+||+.||++||++.+++++|+++.+..
T Consensus 244 ----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 244 ----------LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp ----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred ----------CCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 0111223456889999999999999999999999999887643
No 246
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=2.8e-37 Score=341.26 Aligned_cols=254 Identities=28% Similarity=0.336 Sum_probs=200.4
Q ss_pred HHHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc----------cHHHHHHHHHHHHhcCCCceeeEEEEEE
Q 002061 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----------GVKVFAAEMEILGKIRHRNILKLYACLL 741 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----------~~~~~~~E~~~l~~l~hpniv~l~~~~~ 741 (973)
....++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+|++++++++||||+++++++.
T Consensus 6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 85 (322)
T 2ycf_A 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 85 (322)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEc
Confidence 344568999999999999999999999999999999886421 2234789999999999999999999987
Q ss_pred eCCeeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCC---e
Q 002061 742 KGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE---P 818 (973)
Q Consensus 742 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~---~ 818 (973)
.+. .|+||||+++|+|.+++.. ...+++..+..++.|++.||+||| +++++||||||+||+++.++. +
T Consensus 86 ~~~-~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~ 156 (322)
T 2ycf_A 86 AED-YYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLI 156 (322)
T ss_dssp SSS-EEEEEECCTTEETHHHHST-----TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCE
T ss_pred CCc-eEEEEecCCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeE
Confidence 655 8999999999999998864 245889999999999999999999 789999999999999987664 9
Q ss_pred EEecccCcccccCCCCcccccccCCccccccccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHH
Q 002061 819 KIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAY---TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWV 895 (973)
Q Consensus 819 kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~ 895 (973)
||+|||++...... .......||+.|+|||++. +..++.++|||||||++|+|++|+.||...... ......+
T Consensus 157 kl~Dfg~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~ 232 (322)
T 2ycf_A 157 KITDFGHSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ-VSLKDQI 232 (322)
T ss_dssp EECCCTTCEECCCC---HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS-SCHHHHH
T ss_pred EEccCccceecccc---cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH-HHHHHHH
Confidence 99999999866432 1122346899999999974 567889999999999999999999999754221 1222222
Q ss_pred HHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 896 STHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
...... ............+.+++.+||+.||++||++.|++++
T Consensus 233 ~~~~~~-----------~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 233 TSGKYN-----------FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp HHTCCC-----------CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HhCccc-----------cCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 111000 0011112234568899999999999999999999864
No 247
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.4e-36 Score=345.27 Aligned_cols=348 Identities=16% Similarity=0.173 Sum_probs=222.4
Q ss_pred ccCCCCCCCCCCCcceeeeCCCCCceEEEeecCCCCCccccccccCCccCcEeeCCCCcccCcCChhhhCCCCCcEEEec
Q 002061 50 LDSWKESADSPCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVT 129 (973)
Q Consensus 50 ~~~W~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~ 129 (973)
+++|....+|||.|.+..|.... +.+............-..++++++|++++|.++...+..+..+++|++|+|+
T Consensus 3 ~~~~~~~~~C~~~~~~~~c~~~~-----~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~ 77 (390)
T 3o6n_A 3 VKPRQPEYKCIDSNLQYDCVFYD-----VHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLN 77 (390)
T ss_dssp ----CCEECBCC------EEEES-----CEECSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECT
T ss_pred cCCCCCccceehhhhhhccceee-----eeeecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECC
Confidence 67899888776767666664211 2222222222222233457899999999999885444457899999999999
Q ss_pred CCcccCCCC-cccCCCCCCEEeccCccCCCccccccccccccceEEccCCcCCCCCCccc-ccCCCCCCEEEcccCCCCC
Q 002061 130 GNAMVGSVP-DLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPES-IGNLKNLTYLFLAHCNLRG 207 (973)
Q Consensus 130 ~n~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~-~~~l~~L~~L~L~~n~l~~ 207 (973)
+|.+.+.++ .++.+++|++|+|++|.+++..|..|.++++|++|++++|.+. .+|.. ++++++|++|+|++|++++
T Consensus 78 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~--~l~~~~~~~l~~L~~L~L~~n~l~~ 155 (390)
T 3o6n_A 78 DLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS--SLPRGIFHNTPKLTTLSMSNNNLER 155 (390)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC--CCCTTTTTTCTTCCEEECCSSCCCB
T ss_pred CCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC--cCCHHHhcCCCCCcEEECCCCccCc
Confidence 999988776 6899999999999999999888888888888888888888886 45555 5788888888888888887
Q ss_pred CCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccccCCcCCccccccccccEEEeeccccccccCCccCC
Q 002061 208 RIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGN 287 (973)
Q Consensus 208 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 287 (973)
..+..+..+++|++|++++|++++. .+..+++|++|++++|.+++ +...++|++|++++|.+... |...
T Consensus 156 ~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~l~~~-~~~~-- 224 (390)
T 3o6n_A 156 IEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVV-RGPV-- 224 (390)
T ss_dssp CCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE-----EECCSSCSEEECCSSCCCEE-ECCC--
T ss_pred cChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccc-----cCCCCcceEEECCCCeeeec-cccc--
Confidence 7777888888888888888888754 35667778888888887763 23345677777777777643 3222
Q ss_pred CCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHH
Q 002061 288 LKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLL 367 (973)
Q Consensus 288 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll 367 (973)
.++|+.|++++|++++. ..+..+++|+.|++++|.+++..|..+..+++|++|+|++|++++
T Consensus 225 ~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~---------------- 286 (390)
T 3o6n_A 225 NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA---------------- 286 (390)
T ss_dssp CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE----------------
T ss_pred cccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc----------------
Confidence 35666666666666642 345555555555555555555445555555555555555555441
Q ss_pred hhhccCCCCccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCC
Q 002061 368 ALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSG 447 (973)
Q Consensus 368 ~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~ 447 (973)
+|..+..+++|++|+|++|+++ .+|..+ ..+++|++|+|++|+++.
T Consensus 287 ---------~~~~~~~l~~L~~L~L~~n~l~-~~~~~~------------------------~~l~~L~~L~L~~N~i~~ 332 (390)
T 3o6n_A 287 ---------LNLYGQPIPTLKVLDLSHNHLL-HVERNQ------------------------PQFDRLENLYLDHNSIVT 332 (390)
T ss_dssp ---------EECSSSCCTTCCEEECCSSCCC-CCGGGH------------------------HHHTTCSEEECCSSCCCC
T ss_pred ---------cCcccCCCCCCCEEECCCCcce-ecCccc------------------------cccCcCCEEECCCCccce
Confidence 2222333444555555555544 233333 444555566666666553
Q ss_pred CCChhhhcCCCCCEEEccCCcCC
Q 002061 448 ELPSELGRLTNLERLILTNNNFS 470 (973)
Q Consensus 448 ~~p~~~~~l~~L~~L~Ls~N~l~ 470 (973)
. + +..+++|+.|++++|+++
T Consensus 333 ~-~--~~~~~~L~~L~l~~N~~~ 352 (390)
T 3o6n_A 333 L-K--LSTHHTLKNLTLSHNDWD 352 (390)
T ss_dssp C-C--CCTTCCCSEEECCSSCEE
T ss_pred e-C--chhhccCCEEEcCCCCcc
Confidence 2 2 455566666666666665
No 248
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.1e-37 Score=352.09 Aligned_cols=271 Identities=22% Similarity=0.262 Sum_probs=188.7
Q ss_pred CCcc-cCcccccCceEEEEEEec--CCCcEEEEEeeeccccHHHHHHHHHHHHhcCCCceeeEEEEEEe--CCeeEEEEE
Q 002061 677 NLEE-DNLIGSGGTGKVYRLDLK--KNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLK--GGSSFLVLE 751 (973)
Q Consensus 677 ~~~~-~~~lG~G~~g~V~~a~~~--~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~lv~e 751 (973)
.|++ .++||+|+||+||+|++. .+++.||||++........+.+|++++++++||||+++++++.. +...|+|||
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e 100 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 100 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEe
Confidence 4555 468999999999999976 46889999999876666788999999999999999999999954 678999999
Q ss_pred ccCCCchHHHHHhhhcC----CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeee----cCCCCeEEecc
Q 002061 752 YMPNGNLFQALHKRVKE----GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL----DEDYEPKIADF 823 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~----~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill----~~~~~~kl~Df 823 (973)
|++ |+|.+++...... ....+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+||
T Consensus 101 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 176 (405)
T 3rgf_A 101 YAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADM 176 (405)
T ss_dssp CCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEECCT
T ss_pred CCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEEEEC
Confidence 995 6888888644221 1224899999999999999999999 7899999999999999 67789999999
Q ss_pred cCcccccCCCC-cccccccCCccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCc--------ccHHH
Q 002061 824 GVAKIAENSPK-VSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDG--------KDIVY 893 (973)
Q Consensus 824 gl~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~--------~~~~~ 893 (973)
|+++....... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||.....+. ..+..
T Consensus 177 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~ 256 (405)
T 3rgf_A 177 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR 256 (405)
T ss_dssp TCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHH
T ss_pred CCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHH
Confidence 99987653321 1223346789999999999874 58999999999999999999999997542210 11111
Q ss_pred HHHHHhccccc--cchh-------------ccccccCcchH--------HHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 894 WVSTHLNNHEN--VLKV-------------LDCEVASESIK--------EDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 894 ~~~~~~~~~~~--~~~~-------------~~~~~~~~~~~--------~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.+. ....... ...+ ........... .....+.+++.+||+.||.+|||+.|+++|-
T Consensus 257 i~~-~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp 335 (405)
T 3rgf_A 257 IFN-VMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDP 335 (405)
T ss_dssp HHH-HHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HHH-hhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 111 1100000 0000 00000000000 0134678999999999999999999999986
Q ss_pred hc
Q 002061 951 AD 952 (973)
Q Consensus 951 ~~ 952 (973)
.=
T Consensus 336 ~f 337 (405)
T 3rgf_A 336 YF 337 (405)
T ss_dssp GG
T ss_pred hh
Confidence 53
No 249
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.7e-36 Score=344.56 Aligned_cols=335 Identities=19% Similarity=0.187 Sum_probs=240.5
Q ss_pred CCCCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccccCCcCCccccccccccEEE
Q 002061 192 LKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFD 271 (973)
Q Consensus 192 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 271 (973)
++++++|++++|.++...+..+..+++|++|+|++|++++..+..|..+++|++|+|++|.+++..|..|.++++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 56788888888887755555567778888888888887766666777777777777777777766666677777777777
Q ss_pred eeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCCccccccccccccccccccccc
Q 002061 272 ISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSG 351 (973)
Q Consensus 272 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~ 351 (973)
|++|+++...+..+.++++|++|++++|++++..+..|..+++|+.|++++|++++. .+..+++|+.|++++|.++
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~- 199 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS- 199 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCS-
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccc-
Confidence 777777744444456777777777777777766666666666666666666666543 2344455555555555544
Q ss_pred cCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCC
Q 002061 352 SFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGL 431 (973)
Q Consensus 352 ~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 431 (973)
+ +...++|+.|++++|+++..+.. .
T Consensus 200 -----------------------------------------------~-----~~~~~~L~~L~l~~n~l~~~~~~---~ 224 (390)
T 3o6n_A 200 -----------------------------------------------T-----LAIPIAVEELDASHNSINVVRGP---V 224 (390)
T ss_dssp -----------------------------------------------E-----EECCSSCSEEECCSSCCCEEECC---C
T ss_pred -----------------------------------------------c-----cCCCCcceEEECCCCeeeecccc---c
Confidence 1 11223444444444444443221 2
Q ss_pred CCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchh
Q 002061 432 STSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLN 511 (973)
Q Consensus 432 ~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 511 (973)
.++|+.|+|++|++++. ..+..+++|++|+|++|.+++..|..|..+++|++|+|++|++++ +|..+..+++|+.|+
T Consensus 225 ~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~ 301 (390)
T 3o6n_A 225 NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLD 301 (390)
T ss_dssp CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEE
T ss_pred cccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEE
Confidence 35788888888888753 578888899999999999988888888889999999999999885 466667888999999
Q ss_pred ccccccccCCCccccccCCCCeeecCCCccCCCCChhhhccc-CceEEccCCccccccCcccccCCCCccccCCCCCccC
Q 002061 512 LARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLDFLRMGGDGAFAGNEGLCLD 590 (973)
Q Consensus 512 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~n~~lc~~ 590 (973)
|++|+++ .+|..+..+++|+.|+|++|++++. | +..++ |+.|++++|+|.|.+...+.+......+.+++..|..
T Consensus 302 L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~c~~ 377 (390)
T 3o6n_A 302 LSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKI 377 (390)
T ss_dssp CCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCSCCCT
T ss_pred CCCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccchhHHHHHHHHHhhcccccCceecc
Confidence 9999998 5677788899999999999999854 4 44444 8999999999999887765555555678888888876
Q ss_pred cc
Q 002061 591 QS 592 (973)
Q Consensus 591 ~~ 592 (973)
+.
T Consensus 378 ~~ 379 (390)
T 3o6n_A 378 DY 379 (390)
T ss_dssp TC
T ss_pred cc
Confidence 44
No 250
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=9.6e-38 Score=347.88 Aligned_cols=253 Identities=23% Similarity=0.312 Sum_probs=199.5
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc---ccHHHHHHHHHH-HHhcCCCceeeEEEEEEeCCeeEEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEI-LGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~-l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
..+|++.+.||+|+||+||+|++..+++.||||++... ....++.+|..+ ++.++||||+++++++..++..|+||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 45788999999999999999999988999999998653 233445556655 77789999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCC-CeEecCCCCCCeeecCCCCeEEecccCcccc
Q 002061 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSP-PIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~-~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
||++ |+|.+++..... ....+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+|||+++..
T Consensus 130 e~~~-~~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 130 ELMD-TSLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp CCCS-EEHHHHHHHHHH-TSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred HHhh-CcHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 9996 599999875422 3456899999999999999999999 55 9999999999999999999999999999766
Q ss_pred cCCCCcccccccCCccccccccccc----cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhcccccc
Q 002061 830 ENSPKVSDYSCFAGTHGYIAPELAY----TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
... .......||+.|+|||++. +..++.++|||||||++|||++|+.||..... ....+........
T Consensus 205 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~----~~~~~~~~~~~~~-- 275 (340)
T 3an0_A 205 VDS---VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT----PFQQLKQVVEEPS-- 275 (340)
T ss_dssp SCH---HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC----HHHHHHHHHHSCC--
T ss_pred ccc---cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc----hHHHHHHHhcCCC--
Confidence 432 1222346899999999964 34789999999999999999999999975321 1111111111111
Q ss_pred chhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
+. .........+.+++.+||+.||++||++.|++++
T Consensus 276 -----~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 276 -----PQ---LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp -----CC---CCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred -----CC---CCcccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 00 0111234568899999999999999999999985
No 251
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=4.7e-37 Score=345.37 Aligned_cols=264 Identities=22% Similarity=0.285 Sum_probs=203.0
Q ss_pred cCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEeC-----CeeE
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKG-----GSSF 747 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~~~ 747 (973)
.+|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++... ...|
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 106 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 106 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence 5799999999999999999999999999999998753 2346788999999999999999999999754 4689
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcc
Q 002061 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+||||++ |+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 107 iv~e~~~-~~L~~~l~~~------~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 176 (364)
T 3qyz_A 107 IVQDLME-TDLYKLLKTQ------HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR 176 (364)
T ss_dssp EEEECCS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEcccC-cCHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceE
Confidence 9999996 6999998753 4889999999999999999999 7899999999999999999999999999998
Q ss_pred cccCCCCc-ccccccCCcccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccc-
Q 002061 828 IAENSPKV-SDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN- 904 (973)
Q Consensus 828 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~- 904 (973)
........ .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.... ..+....+.........
T Consensus 177 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~i~~~~~~~~~~ 254 (364)
T 3qyz_A 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH--YLDQLNHILGILGSPSQE 254 (364)
T ss_dssp ECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSS--GGGHHHHHHHHHCSCCHH
T ss_pred ecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCC--hHHHHHHHHHHhCCCCHH
Confidence 66533221 11234578999999998754 458999999999999999999999997542 22222211111111000
Q ss_pred -cc------------hhcccccc--CcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 905 -VL------------KVLDCEVA--SESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 905 -~~------------~~~~~~~~--~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.. ........ ..........+.+++.+|++.||++|||+.|++++-.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 316 (364)
T 3qyz_A 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316 (364)
T ss_dssp HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred HHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcc
Confidence 00 00000000 0001122456889999999999999999999998754
No 252
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=9.4e-37 Score=333.20 Aligned_cols=253 Identities=26% Similarity=0.316 Sum_probs=205.3
Q ss_pred HHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc-----------cHHHHHHHHHHHHhcC-CCceeeEEEEEE
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----------GVKVFAAEMEILGKIR-HRNILKLYACLL 741 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-----------~~~~~~~E~~~l~~l~-hpniv~l~~~~~ 741 (973)
..++|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3568999999999999999999999999999999986431 2356788999999995 999999999999
Q ss_pred eCCeeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEe
Q 002061 742 KGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIA 821 (973)
Q Consensus 742 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 821 (973)
.+...++||||+++++|.+++... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~ 166 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLT 166 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEEC
T ss_pred cCCeEEEEEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEe
Confidence 999999999999999999999764 35889999999999999999999 7899999999999999999999999
Q ss_pred cccCcccccCCCCcccccccCCccccccccccc------cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHH
Q 002061 822 DFGVAKIAENSPKVSDYSCFAGTHGYIAPELAY------TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWV 895 (973)
Q Consensus 822 Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~ 895 (973)
|||.+........ .....|++.|+|||++. ...++.++||||||+++|||++|+.||.... .....
T Consensus 167 dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~ 238 (298)
T 1phk_A 167 DFGFSCQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK-----QMLML 238 (298)
T ss_dssp CCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHH
T ss_pred cccchhhcCCCcc---cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc-----HHHHH
Confidence 9999987654322 23356899999999985 4568899999999999999999999996531 11111
Q ss_pred HHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 896 STHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
......... ............+.+++.+||+.||++||++.|++++-
T Consensus 239 ~~~~~~~~~--------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~ 285 (298)
T 1phk_A 239 RMIMSGNYQ--------FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHP 285 (298)
T ss_dssp HHHHHTCCC--------CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSG
T ss_pred HHHhcCCcc--------cCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhCh
Confidence 111111100 00111123345688999999999999999999999754
No 253
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=4.4e-37 Score=351.61 Aligned_cols=264 Identities=25% Similarity=0.327 Sum_probs=197.4
Q ss_pred cCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhcCCCceeeEEEEEEeC------CeeEEE
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKG------GSSFLV 749 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------~~~~lv 749 (973)
.+|++.+.||+|+||+||+|++..+++.||||++.... ....+|++++++++||||+++++++... ...++|
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv 131 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 131 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT--TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc--hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence 46888999999999999999999999999999986543 2235799999999999999999988542 236799
Q ss_pred EEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCC-CCeEEecccCccc
Q 002061 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED-YEPKIADFGVAKI 828 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~Dfgl~~~ 828 (973)
|||+++ ++.+.+.... .....+++..+..++.|+++||+||| +++|+||||||+|||++.+ +.+||+|||+++.
T Consensus 132 ~e~~~~-~l~~~~~~~~-~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~ 206 (420)
T 1j1b_A 132 LDYVPE-TVYRVARHYS-RAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206 (420)
T ss_dssp EECCCE-EHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred hhcccc-cHHHHHHHHh-hccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhhh
Confidence 999964 7777765432 23456899999999999999999999 8899999999999999965 5689999999986
Q ss_pred ccCCCCcccccccCCccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHh--------
Q 002061 829 AENSPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHL-------- 899 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~-------- 899 (973)
...... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||..... ...+...+...-
T Consensus 207 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~-~~~l~~i~~~lg~p~~~~~~ 282 (420)
T 1j1b_A 207 LVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEIIKVLGTPTREQIR 282 (420)
T ss_dssp CCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCSCCHHHHH
T ss_pred cccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHH
Confidence 644322 2235689999999998765 789999999999999999999999975421 111111111100
Q ss_pred ccccccchhccccccCcc-----hHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 900 NNHENVLKVLDCEVASES-----IKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
...+...++..+...... .......+.+++.+||+.||.+||++.|+++|-
T Consensus 283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp 338 (420)
T 1j1b_A 283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 338 (420)
T ss_dssp HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCH
Confidence 000001111111111111 112245788999999999999999999999864
No 254
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=3e-37 Score=346.03 Aligned_cols=259 Identities=22% Similarity=0.295 Sum_probs=185.0
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeC------C
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKG------G 744 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------~ 744 (973)
.++|++.+.||+|+||.||+|++..+|+.||||++... ...+.+.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 36899999999999999999999999999999998652 2456778999999999999999999998654 5
Q ss_pred eeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEeccc
Q 002061 745 SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFG 824 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 824 (973)
..|+||||+ +++|.+++.. ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG 177 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG 177 (367)
T ss_dssp CCEEEEECC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC--
T ss_pred eEEEEeccc-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeecc
Confidence 679999999 7899998864 35899999999999999999999 7899999999999999999999999999
Q ss_pred CcccccCCCCcccccccCCcccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhcccc
Q 002061 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE 903 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 903 (973)
+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.... ..+....+........
T Consensus 178 ~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~l~~i~~~~g~p~ 250 (367)
T 2fst_X 178 LARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPG 250 (367)
T ss_dssp ------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCSCC
T ss_pred cccccccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCC
Confidence 99765432 233578999999999876 678999999999999999999999996541 1111111111111000
Q ss_pred -c-cc--------hhcc--ccccCcc----hHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 904 -N-VL--------KVLD--CEVASES----IKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 904 -~-~~--------~~~~--~~~~~~~----~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
. .. ..+. +...... .......+.+++.+|++.||.+|||+.|+++|-
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp 313 (367)
T 2fst_X 251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 313 (367)
T ss_dssp HHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcCh
Confidence 0 00 0000 0000000 011235678999999999999999999999874
No 255
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=6.7e-38 Score=343.20 Aligned_cols=264 Identities=27% Similarity=0.401 Sum_probs=187.8
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
.++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++..++..++|||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK 93 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence 46899999999999999999999888999999988653 345667899999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcC---CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccc
Q 002061 752 YMPNGNLFQALHKRVKE---GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~---~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
|+++|+|.+++...... ....+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++..
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 99999999999753222 2345899999999999999999999 78999999999999999999999999999876
Q ss_pred ccCCCCc---ccccccCCcccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccc
Q 002061 829 AENSPKV---SDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 829 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
....... .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||.... ....... ........
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~~--~~~~~~~~ 246 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYP--PMKVLML--TLQNDPPS 246 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSC--GGGHHHH--HHTSSCCC
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCc--hhhHHHH--HhccCCCc
Confidence 6433211 11233568999999999875 568999999999999999999999997542 1111111 11111110
Q ss_pred cc-hhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 905 VL-KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 905 ~~-~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.. ...+... .......+.+++.+||+.||.+||++.|++++
T Consensus 247 ~~~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 247 LETGVQDKEM----LKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp TTC-----CC----CCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cccccccchh----hhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00 0011111 11223467889999999999999999999986
No 256
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.1e-37 Score=370.86 Aligned_cols=247 Identities=25% Similarity=0.297 Sum_probs=196.0
Q ss_pred CcccccCceEEEEEEec--CCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEEEccCC
Q 002061 682 NLIGSGGTGKVYRLDLK--KNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 682 ~~lG~G~~g~V~~a~~~--~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
+.||+|+||+||+|.+. .+++.||||+++.. ...+++.+|++++++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999654 55788999998763 235779999999999999999999999864 568899999999
Q ss_pred CchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccCCCCc
Q 002061 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
|+|.+++... ..+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++........
T Consensus 454 g~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 525 (635)
T 4fl3_A 454 GPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525 (635)
T ss_dssp EEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred CCHHHHHhhC-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence 9999999753 35889999999999999999999 789999999999999999999999999999876543221
Q ss_pred -ccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccccchhccccc
Q 002061 836 -SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 836 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
.......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.... .......+.. ..
T Consensus 526 ~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~--~~~~~~~i~~----~~---------- 589 (635)
T 4fl3_A 526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK--GSEVTAMLEK----GE---------- 589 (635)
T ss_dssp ---------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC--HHHHHHHHHT----TC----------
T ss_pred cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHc----CC----------
Confidence 22233456789999999999999999999999999999998 999997541 1122221111 11
Q ss_pred cCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002061 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
....+......+.+++.+||+.||++||++.+|++.|+++
T Consensus 590 ~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 590 RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 0011122345688999999999999999999999999864
No 257
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=8.2e-37 Score=343.33 Aligned_cols=272 Identities=22% Similarity=0.258 Sum_probs=193.5
Q ss_pred HHHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCe-----
Q 002061 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGS----- 745 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~----- 745 (973)
...+++|++.+.||+|+||+||+|++..+++.||||++... .......+|++.++.++||||+++++++.....
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 98 (360)
T 3e3p_A 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRD 98 (360)
T ss_dssp HHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTC
T ss_pred hhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccc
Confidence 56788999999999999999999999999999999988653 334556788888999999999999999866433
Q ss_pred --eEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecC-CCCeEEec
Q 002061 746 --SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE-DYEPKIAD 822 (973)
Q Consensus 746 --~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~D 822 (973)
.++||||+++ +|.+.+... ......+++..+..++.|++.|++|||.+ +++|+||||||+||+++. ++.+||+|
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~~~~~kl~D 175 (360)
T 3e3p_A 99 IYLNVVMEYVPD-TLHRCCRNY-YRRQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCD 175 (360)
T ss_dssp EEEEEEEECCSC-BHHHHHHHH-HTTTCCCCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEETTTTEEEECC
T ss_pred eeEEEEeecccc-cHHHHHHHH-hhcccCCCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeCCCCcEEEee
Confidence 7899999975 565555443 23345688999999999999999999944 579999999999999997 89999999
Q ss_pred ccCcccccCCCCcccccccCCccccccccccccCC-CCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhcc
Q 002061 823 FGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCK-VSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNN 901 (973)
Q Consensus 823 fgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 901 (973)
||+++....... .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||..... .......+......
T Consensus 176 fg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-~~~~~~~~~~~~~~ 251 (360)
T 3e3p_A 176 FGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS-AGQLHEIVRVLGCP 251 (360)
T ss_dssp CTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCC
T ss_pred CCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh-HHHHHHHHHHcCCC
Confidence 999986654322 22356899999999986654 89999999999999999999999975411 11111111110000
Q ss_pred ccccc----------hhccccc------cCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 902 HENVL----------KVLDCEV------ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 902 ~~~~~----------~~~~~~~------~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
..... ...+... ...........+.+++.+||+.||.+|||+.|+++|-
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 316 (360)
T 3e3p_A 252 SREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHP 316 (360)
T ss_dssp CHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSG
T ss_pred CHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCc
Confidence 00000 0000000 0001112356789999999999999999999999873
No 258
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2e-36 Score=342.54 Aligned_cols=205 Identities=24% Similarity=0.286 Sum_probs=175.8
Q ss_pred cCHHHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc-cHHHHHHHHHHHHhcC-CC-----ceeeEEEEEEe
Q 002061 670 IDAEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-GVKVFAAEMEILGKIR-HR-----NILKLYACLLK 742 (973)
Q Consensus 670 ~~~~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~-hp-----niv~l~~~~~~ 742 (973)
.+....++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+|+++++.++ |+ +|+++++++..
T Consensus 48 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~ 127 (382)
T 2vx3_A 48 NGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF 127 (382)
T ss_dssp TTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE
T ss_pred cCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc
Confidence 33455789999999999999999999999999999999987643 3456778999988884 44 59999999999
Q ss_pred CCeeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeec--CCCCeEE
Q 002061 743 GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD--EDYEPKI 820 (973)
Q Consensus 743 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~--~~~~~kl 820 (973)
++..++||||++ |+|.+++... ....+++..+..++.|++.||+|||++ +.+|+||||||+||+++ .++.+||
T Consensus 128 ~~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL 202 (382)
T 2vx3_A 128 RNHLCLVFEMLS-YNLYDLLRNT---NFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKI 202 (382)
T ss_dssp TTEEEEEEECCC-CBHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEE
T ss_pred CCceEEEEecCC-CCHHHHHhhc---CcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEE
Confidence 999999999995 6999999864 224589999999999999999999953 46899999999999995 4778999
Q ss_pred ecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcc
Q 002061 821 ADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEE 884 (973)
Q Consensus 821 ~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~ 884 (973)
+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 203 ~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 203 VDFGSSCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CCCTTCEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EeccCceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999866432 22356899999999999999999999999999999999999999754
No 259
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.8e-36 Score=337.40 Aligned_cols=263 Identities=22% Similarity=0.274 Sum_probs=204.6
Q ss_pred HHHcCCcccCcccccCceEEEEEEe-cCCCcEEEEEeeecc-ccHHHHHHHHHHHHhcCCC------ceeeEEEEEEeCC
Q 002061 673 EQICNLEEDNLIGSGGTGKVYRLDL-KKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHR------NILKLYACLLKGG 744 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~V~~a~~-~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hp------niv~l~~~~~~~~ 744 (973)
...++|++.+.||+|+||+||+|.+ ..+++.||||++... ...+.+.+|+++++.++|+ +++++++++..++
T Consensus 11 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~ 90 (339)
T 1z57_A 11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG 90 (339)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred CccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence 3446899999999999999999998 557889999998753 3456788999999998765 4999999999999
Q ss_pred eeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecC----------
Q 002061 745 SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE---------- 814 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~---------- 814 (973)
..++||||+ +++|.+++... ....+++..+..++.|++.||+||| +++|+||||||+||+++.
T Consensus 91 ~~~lv~e~~-~~~l~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~ 163 (339)
T 1z57_A 91 HICIVFELL-GLSTYDFIKEN---GFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPK 163 (339)
T ss_dssp EEEEEEECC-CCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC--
T ss_pred cEEEEEcCC-CCCHHHHHHhc---CCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCc
Confidence 999999999 89999999764 2345889999999999999999999 789999999999999987
Q ss_pred ---------CCCeEEecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccc
Q 002061 815 ---------DYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEY 885 (973)
Q Consensus 815 ---------~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~ 885 (973)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 164 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 238 (339)
T 1z57_A 164 IKRDERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238 (339)
T ss_dssp --CEEEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSC
T ss_pred cccccccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence 668999999999765432 223468999999999999999999999999999999999999997541
Q ss_pred CCcccHHHHHHHHhccccc-c------chhcc---cc-------------------ccCcchHHHHHHHHHHHHHhcCCC
Q 002061 886 GDGKDIVYWVSTHLNNHEN-V------LKVLD---CE-------------------VASESIKEDMIKLLKIAVVCTTKL 936 (973)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~-~------~~~~~---~~-------------------~~~~~~~~~~~~l~~l~~~cl~~d 936 (973)
.......+.......+. . ..... .. ............+.+++.+||+.|
T Consensus 239 --~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d 316 (339)
T 1z57_A 239 --SKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYD 316 (339)
T ss_dssp --HHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSS
T ss_pred --hHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcC
Confidence 11111111111110000 0 00000 00 000112234567899999999999
Q ss_pred CCCCCCHHHHHHH
Q 002061 937 PNLRPPMREVVKM 949 (973)
Q Consensus 937 P~~Rpt~~evl~~ 949 (973)
|.+|||+.|++++
T Consensus 317 P~~Rpt~~ell~h 329 (339)
T 1z57_A 317 PAKRITLREALKH 329 (339)
T ss_dssp TTTSCCHHHHTTS
T ss_pred cccccCHHHHhcC
Confidence 9999999999976
No 260
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=2.6e-36 Score=361.83 Aligned_cols=335 Identities=19% Similarity=0.183 Sum_probs=262.4
Q ss_pred CCCCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccccCCcCCccccccccccEEE
Q 002061 192 LKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFD 271 (973)
Q Consensus 192 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 271 (973)
+++++.|++++|.++...+..+..+++|++|+|++|.|++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 57899999999999877777788899999999999999877777888888888888888888887777788888888888
Q ss_pred eeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCCccccccccccccccccccccc
Q 002061 272 ISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSG 351 (973)
Q Consensus 272 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~ 351 (973)
|++|.+++..+..|+++++|++|++++|.+++..|..|+.+++|+.|++++|.+++.. ++.+++|+.|++++|.+++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc
Confidence 8888888655555688888888888888888777777777777777777777776532 4445556666666665542
Q ss_pred cCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCC
Q 002061 352 SFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGL 431 (973)
Q Consensus 352 ~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 431 (973)
+...++|++|++++|.++ ......
T Consensus 207 -----------------------------l~~~~~L~~L~ls~n~l~------------------------~~~~~~--- 230 (597)
T 3oja_B 207 -----------------------------LAIPIAVEELDASHNSIN------------------------VVRGPV--- 230 (597)
T ss_dssp -----------------------------EECCTTCSEEECCSSCCC------------------------EEECSC---
T ss_pred -----------------------------ccCCchhheeeccCCccc------------------------cccccc---
Confidence 111234555555555554 332221
Q ss_pred CCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchh
Q 002061 432 STSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLN 511 (973)
Q Consensus 432 ~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 511 (973)
.++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|++++ +|..+..+++|+.|+
T Consensus 231 ~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~ 307 (597)
T 3oja_B 231 NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLD 307 (597)
T ss_dssp CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEE
T ss_pred CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEE
Confidence 2578888888888875 4678889999999999999998888899999999999999999986 466777889999999
Q ss_pred ccccccccCCCccccccCCCCeeecCCCccCCCCChhhhccc-CceEEccCCccccccCcccccCCCCccccCCCCCccC
Q 002061 512 LARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLDFLRMGGDGAFAGNEGLCLD 590 (973)
Q Consensus 512 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~n~~lc~~ 590 (973)
|++|.++ .+|..+..+++|+.|+|++|+|++.. +..++ |+.|+|++|+|+|.+...+........+.+++..|+.
T Consensus 308 Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 383 (597)
T 3oja_B 308 LSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKI 383 (597)
T ss_dssp CCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCCCCCT
T ss_pred CCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCEEEeeCCCCCChhHHHHHHHHhhhccccccccCCc
Confidence 9999998 67788899999999999999998553 33444 8999999999999988766555555678999999987
Q ss_pred cc
Q 002061 591 QS 592 (973)
Q Consensus 591 ~~ 592 (973)
+.
T Consensus 384 ~~ 385 (597)
T 3oja_B 384 DY 385 (597)
T ss_dssp TC
T ss_pred ch
Confidence 54
No 261
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=5.9e-37 Score=339.48 Aligned_cols=257 Identities=26% Similarity=0.328 Sum_probs=181.9
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc---cHHHHHHHHH-HHHhcCCCceeeEEEEEEeCCeeEEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD---GVKVFAAEME-ILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~E~~-~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
.++|++.+.||+|+||+||+|.+..+++.||||++.... ...++.+|+. +++.++||||+++++++..++..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 367899999999999999999999899999999987632 2334555665 677789999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCC-CeEecCCCCCCeeecCCCCeEEecccCcccc
Q 002061 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSP-PIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~-~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
||++ |+|.+++..........+++..+..++.|++.|++||| +. +++||||||+||+++.++.+||+|||+++..
T Consensus 101 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 9997 58888887543334567899999999999999999999 66 9999999999999999999999999999766
Q ss_pred cCCCCcccccccCCcccccccccc----ccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhcccccc
Q 002061 830 ENSPKVSDYSCFAGTHGYIAPELA----YTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
..... .....||+.|+|||++ .+..++.++|||||||++|||++|+.||........ ........
T Consensus 177 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~~---- 245 (327)
T 3aln_A 177 VDSIA---KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD----QLTQVVKG---- 245 (327)
T ss_dssp --------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------CCCCCS----
T ss_pred ccccc---cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH----HHHHHhcC----
Confidence 43321 2234689999999998 466789999999999999999999999975311100 00000000
Q ss_pred chhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
..+.............+.+++.+||+.||++||++.|++++
T Consensus 246 ---~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 246 ---DPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp ---CCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ---CCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 00111111111234568899999999999999999999875
No 262
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.3e-36 Score=342.37 Aligned_cols=259 Identities=22% Similarity=0.285 Sum_probs=197.2
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCee----
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSS---- 746 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~---- 746 (973)
.++|.+.+.||+|+||+||+|++..+++.||||++... ...+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 35889999999999999999999999999999998753 2346688999999999999999999999876654
Q ss_pred --EEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEeccc
Q 002061 747 --FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFG 824 (973)
Q Consensus 747 --~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 824 (973)
|+||||++ ++|.+++.. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg 189 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM-------EFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFG 189 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred eEEEEEcccc-ccHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecC
Confidence 99999996 688777632 3889999999999999999999 7899999999999999999999999999
Q ss_pred CcccccCCCCcccccccCCcccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhcccc
Q 002061 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE 903 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 903 (973)
+++..... .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.... ..+....+........
T Consensus 190 ~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--~~~~~~~i~~~~~~~~ 262 (371)
T 4exu_A 190 LARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD--YLDQLTQILKVTGVPG 262 (371)
T ss_dssp CC-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCC
T ss_pred cccccccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHhCCCc
Confidence 99755432 223568999999999887 678999999999999999999999997531 1111111111000000
Q ss_pred -ccch------------hccccccC---cchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 904 -NVLK------------VLDCEVAS---ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 904 -~~~~------------~~~~~~~~---~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.... ........ .........+.+++.+|++.||++|||+.|++++-.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 326 (371)
T 4exu_A 263 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 326 (371)
T ss_dssp HHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred HHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcc
Confidence 0000 00000000 001123467889999999999999999999998743
No 263
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.5e-36 Score=332.47 Aligned_cols=255 Identities=25% Similarity=0.410 Sum_probs=195.6
Q ss_pred HHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-ccHHHHHHHHHHHHhcCCCceeeEEEEEEe----------
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLK---------- 742 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~---------- 742 (973)
..++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 356789999999999999999999988999999998653 445678899999999999999999998865
Q ss_pred ---CCeeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeE
Q 002061 743 ---GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPK 819 (973)
Q Consensus 743 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 819 (973)
....|+||||+++|+|.+++... ...+++..+..++.|+++||+||| +.+++||||||+||+++.++.+|
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~k 156 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSE----NLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVK 156 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHS----CGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEE
T ss_pred cccCCceEEEEecCCCCCHHHhhhcc----ccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEE
Confidence 35679999999999999999753 345788899999999999999999 78999999999999999999999
Q ss_pred EecccCcccccCCCC------------cccccccCCccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccC
Q 002061 820 IADFGVAKIAENSPK------------VSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYG 886 (973)
Q Consensus 820 l~Dfgl~~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~pf~~~~~ 886 (973)
|+|||++........ ........||+.|+|||++.+. .++.++||||+||++|||++ ||...
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~-- 231 (303)
T 1zy4_A 157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG-- 231 (303)
T ss_dssp ECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH--
T ss_pred EeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc--
Confidence 999999976543211 1122335689999999998764 68999999999999999998 55422
Q ss_pred CcccHHHHHHHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 887 DGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.+............. .............+.+++.+||+.||.+|||+.|++++-
T Consensus 232 --~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 285 (303)
T 1zy4_A 232 --MERVNILKKLRSVSI--------EFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSG 285 (303)
T ss_dssp --HHHHHHHHHHHSTTC--------CCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSS
T ss_pred --hhHHHHHHhcccccc--------ccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCC
Confidence 111111111111111 111111223345678899999999999999999999864
No 264
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.9e-36 Score=328.77 Aligned_cols=253 Identities=28% Similarity=0.378 Sum_probs=204.5
Q ss_pred HHHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeE
Q 002061 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
....++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++..+...+
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence 34567899999999999999999999988999999998652 35677899999999999999999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCC---CCeEEeccc
Q 002061 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED---YEPKIADFG 824 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~---~~~kl~Dfg 824 (973)
+||||+++++|.+++... ..+++..+..++.|++.||+||| +.+++||||||+||+++.+ +.+||+|||
T Consensus 98 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg 169 (287)
T 2wei_A 98 IVGELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFG 169 (287)
T ss_dssp EEECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTT
T ss_pred EEEEccCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccC
Confidence 999999999999998754 25889999999999999999999 7899999999999999754 479999999
Q ss_pred CcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccc
Q 002061 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
++........ .....|++.|+|||++.+ .++.++||||||+++|+|++|+.||.... ..+....+.. ....
T Consensus 170 ~~~~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~--~~~~~~~~~~---~~~~ 240 (287)
T 2wei_A 170 LSTCFQQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN--EYDILKRVET---GKYA 240 (287)
T ss_dssp GGGTBCCCSS---CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHH---CCCC
T ss_pred cceeecCCCc---cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCC--HHHHHHHHHc---CCCC
Confidence 9986644322 222457899999999875 48999999999999999999999996531 1111111111 1100
Q ss_pred cchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
............+.+++.+|++.||++|||+.|++++
T Consensus 241 --------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 241 --------FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp --------CCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred --------CCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 0001112234568899999999999999999999985
No 265
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.6e-36 Score=339.90 Aligned_cols=264 Identities=22% Similarity=0.283 Sum_probs=200.4
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEeC-----Cee
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKG-----GSS 746 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~~ 746 (973)
.++|++.+.||+|+||+||+|++..+++.||||++... .....+.+|++++++++||||+++++++..+ ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 46899999999999999999999999999999998643 2345678999999999999999999988654 678
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCc
Q 002061 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
|+||||++ |+|.+++... .+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++
T Consensus 90 ~lv~e~~~-~~L~~~~~~~------~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ------MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEeccC-ccHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecccc
Confidence 99999996 6999988752 5889999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCcc--------cccccCCcccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHH
Q 002061 827 KIAENSPKVS--------DYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVST 897 (973)
Q Consensus 827 ~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~ 897 (973)
+......... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... .......+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~~~~~ 237 (353)
T 2b9h_A 160 RIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD--YRHQLLLIFG 237 (353)
T ss_dssp EECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHH
T ss_pred cccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCC--cHHHHHHHHH
Confidence 8765322111 1223468999999998764 678999999999999999999999997542 1111111111
Q ss_pred Hhcccc---cc--------chhcc--cccc----CcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 898 HLNNHE---NV--------LKVLD--CEVA----SESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 898 ~~~~~~---~~--------~~~~~--~~~~----~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
...... .. .+... +... ..........+.+++.+||+.||++|||+.|++++-
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 307 (353)
T 2b9h_A 238 IIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHP 307 (353)
T ss_dssp HHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCc
Confidence 110000 00 00000 0000 000112345678999999999999999999999864
No 266
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.9e-37 Score=345.27 Aligned_cols=264 Identities=19% Similarity=0.190 Sum_probs=204.1
Q ss_pred HHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecccc-------------------HHHHHHHHHHHHhcCCCcee
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDG-------------------VKVFAAEMEILGKIRHRNIL 734 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~-------------------~~~~~~E~~~l~~l~hpniv 734 (973)
..++|++.+.||+|+||+||+|++ +++.||||++..... .+.+.+|++++++++||||+
T Consensus 29 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~ 106 (348)
T 2pml_X 29 YINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCL 106 (348)
T ss_dssp EETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBC
T ss_pred ccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcc
Confidence 356899999999999999999999 699999999865321 17889999999999999999
Q ss_pred eEEEEEEeCCeeEEEEEccCCCchHHHHHhh---hcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCC-CCeEecCCCCCCe
Q 002061 735 KLYACLLKGGSSFLVLEYMPNGNLFQALHKR---VKEGKPELDWFRRYKIALGAAKGIAYLHHDCS-PPIIHRDIKSSNI 810 (973)
Q Consensus 735 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~---~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~-~~ivH~Dlkp~Ni 810 (973)
++++++.+++..|+||||+++|+|.+++... .......+++..+..++.|++.||+||| + .+++||||||+||
T Consensus 107 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Ni 183 (348)
T 2pml_X 107 TCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNI 183 (348)
T ss_dssp CCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGE
T ss_pred eEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhE
Confidence 9999999999999999999999999883211 0112456899999999999999999999 5 8999999999999
Q ss_pred eecCCCCeEEecccCcccccCCCCcccccccCCccccccccccccC-CCCc-cchHHHHHHHHHHHHhCCCCCCcccCCc
Q 002061 811 LLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTC-KVSE-KSDVFSFGVVLLELVTGRKPVEEEYGDG 888 (973)
Q Consensus 811 ll~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DvwslG~~l~el~tg~~pf~~~~~~~ 888 (973)
+++.++.+||+|||.+...... ......|+..|+|||++.+. .++. ++||||+||++|||++|+.||......
T Consensus 184 l~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~- 258 (348)
T 2pml_X 184 LMDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL- 258 (348)
T ss_dssp EECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-
T ss_pred EEcCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-
Confidence 9999999999999999866433 22345689999999999877 6666 999999999999999999999754221
Q ss_pred ccHHHHHHHHhccccccch----hccc---cccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 889 KDIVYWVSTHLNNHENVLK----VLDC---EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.... ............ .... .............+.+++.+||+.||++||++.|++++-
T Consensus 259 ~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp 324 (348)
T 2pml_X 259 VELF---NNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHE 324 (348)
T ss_dssp HHHH---HHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSG
T ss_pred HHHH---HHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence 1111 111111110000 0000 000000123345788999999999999999999999863
No 267
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=7.8e-37 Score=346.63 Aligned_cols=268 Identities=24% Similarity=0.323 Sum_probs=196.0
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhcCCCceeeEEEEEEeCC------eeEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKGG------SSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~------~~~l 748 (973)
..+|++.+.||+|+||+||+|++..++ .||+|++..... ...+|+++++.++||||+++++++.... ..++
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~-~~aikk~~~~~~--~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESD-EVAIKKVLQDKR--FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTE-EEEEEEEECCTT--SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCC-eEEEEEEecCcc--hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 457899999999999999999998755 488888765332 2247999999999999999999986543 3789
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeec-CCCCeEEecccCcc
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD-EDYEPKIADFGVAK 827 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~-~~~~~kl~Dfgl~~ 827 (973)
||||++++ +.+.+.... .....+++..+..++.|+++||+||| +.+|+||||||+||+++ .++.+||+|||+++
T Consensus 116 v~e~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 116 VLEYVPET-VYRASRHYA-KLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEECCSEE-HHHHHHHHH-HTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EeeccCcc-HHHHHHHHH-hhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 99999764 444443321 22446899999999999999999999 78999999999999999 79999999999998
Q ss_pred cccCCCCcccccccCCccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhc------
Q 002061 828 IAENSPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLN------ 900 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~------ 900 (973)
....... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||..... .......+...-.
T Consensus 191 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~l~~i~~~~g~p~~~~~ 266 (394)
T 4e7w_A 191 ILIAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG-IDQLVEIIKVLGTPSREQI 266 (394)
T ss_dssp ECCTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHH
T ss_pred cccCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHH
Confidence 7644322 2235689999999998765 589999999999999999999999975421 1111111111000
Q ss_pred --cccccchhccccccCcc-----hHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH--hhcCC
Q 002061 901 --NHENVLKVLDCEVASES-----IKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM--LADAD 954 (973)
Q Consensus 901 --~~~~~~~~~~~~~~~~~-----~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~--L~~~~ 954 (973)
..+...+...+...... .......+.+++.+||++||.+|||+.|+++| ++++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (394)
T 4e7w_A 267 KTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR 329 (394)
T ss_dssp HHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred HhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence 00000000001111111 11234578899999999999999999999987 44443
No 268
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=3.1e-36 Score=333.65 Aligned_cols=269 Identities=20% Similarity=0.252 Sum_probs=203.5
Q ss_pred HHcCCcccCcccccCceEEEEEEec-CCCcEEEEEeeeccc----cHHHHHHHHHHHHhc---CCCceeeEEEEEE----
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLK-KNAGTVAVKQLWKGD----GVKVFAAEMEILGKI---RHRNILKLYACLL---- 741 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~-~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l---~hpniv~l~~~~~---- 741 (973)
...+|++.+.||+|+||+||+|++. .+++.||||++.... ....+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 3468999999999999999999995 668899999886522 233567788887776 8999999999987
Q ss_pred -eCCeeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEE
Q 002061 742 -KGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKI 820 (973)
Q Consensus 742 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 820 (973)
.....++||||++ |+|.+++... ....+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl 161 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKV---PEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKL 161 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHS---CTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEE
T ss_pred CCCceEEEEEecCC-CCHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEE
Confidence 4567899999997 6999999764 2345889999999999999999999 789999999999999999999999
Q ss_pred ecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhc
Q 002061 821 ADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLN 900 (973)
Q Consensus 821 ~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 900 (973)
+|||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+....+.....
T Consensus 162 ~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~~i~~~~~ 236 (326)
T 1blx_A 162 ADFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS--DVDQLGKILDVIG 236 (326)
T ss_dssp CSCCSCCCCCGG---GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHC
T ss_pred ecCcccccccCC---CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC--HHHHHHHHHHHcC
Confidence 999999765432 22334568999999999999999999999999999999999999997541 1111111111111
Q ss_pred ccc--ccch-------hcc---ccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH--hhcCC
Q 002061 901 NHE--NVLK-------VLD---CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM--LADAD 954 (973)
Q Consensus 901 ~~~--~~~~-------~~~---~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~--L~~~~ 954 (973)
... .... .+. ..............+.+++.+||+.||++||++.|++++ +.++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~ 304 (326)
T 1blx_A 237 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE 304 (326)
T ss_dssp CCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred CCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccc
Confidence 000 0000 000 000001112234567899999999999999999999976 44443
No 269
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.1e-36 Score=333.98 Aligned_cols=263 Identities=22% Similarity=0.294 Sum_probs=193.1
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc--ccHHHHHHHHHHHHhcCCCceeeEEEEEE-----------
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLL----------- 741 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~----------- 741 (973)
.++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 36789999999999999999999999999999988653 34567889999999999999999999873
Q ss_pred ---eCCeeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeec-CCCC
Q 002061 742 ---KGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD-EDYE 817 (973)
Q Consensus 742 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~-~~~~ 817 (973)
+....|+||||++ |+|.+++.. ..+++..+..++.|++.||+||| +.+++||||||+||+++ +++.
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~ 159 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ------GPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLV 159 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTE
T ss_pred cccccCceeEEeeccC-CCHHHHhhc------CCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCe
Confidence 3467899999997 699998863 35788999999999999999999 78999999999999997 5679
Q ss_pred eEEecccCcccccCCCC-cccccccCCcccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHH
Q 002061 818 PKIADFGVAKIAENSPK-VSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWV 895 (973)
Q Consensus 818 ~kl~Dfgl~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~ 895 (973)
+||+|||+++....... ........+|..|+|||++.+ ..++.++|||||||++|||++|+.||.... .......+
T Consensus 160 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--~~~~~~~~ 237 (320)
T 2i6l_A 160 LKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH--ELEQMQLI 237 (320)
T ss_dssp EEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHH
T ss_pred EEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCC--HHHHHHHH
Confidence 99999999986643211 122233467899999998865 678999999999999999999999997542 11111111
Q ss_pred HHHhcccc---------ccchhccccc--c----CcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 896 STHLNNHE---------NVLKVLDCEV--A----SESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 896 ~~~~~~~~---------~~~~~~~~~~--~----~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
........ .......... . ..........+.+++.+|++.||++|||+.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 238 LESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 11100000 0000000000 0 00011234678899999999999999999999986
No 270
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.4e-36 Score=337.13 Aligned_cols=258 Identities=21% Similarity=0.263 Sum_probs=177.8
Q ss_pred HHHcCCcccC-cccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhcCCCceeeEEEEEEe----CCeeE
Q 002061 673 EQICNLEEDN-LIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLK----GGSSF 747 (973)
Q Consensus 673 ~~~~~~~~~~-~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~----~~~~~ 747 (973)
...++|++.+ .||+|+||+||+|++..+++.||||++.... ....+....++.++||||+++++++.. +...+
T Consensus 25 ~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP--KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH--HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH--HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 3456888854 6999999999999999999999999986532 222233344667799999999999876 45589
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecC---CCCeEEeccc
Q 002061 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE---DYEPKIADFG 824 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~Dfg 824 (973)
+||||+++|+|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||
T Consensus 103 lv~e~~~gg~L~~~l~~~---~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg 176 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQER---GDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFG 176 (336)
T ss_dssp EEEECCTTEEHHHHHHTC----CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred EEEeccCCCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccc
Confidence 999999999999999854 2346899999999999999999999 789999999999999986 4559999999
Q ss_pred CcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccc
Q 002061 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
+++...... .....||+.|+|||++.+..++.++||||+||++|+|++|+.||......... ...........
T Consensus 177 ~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~~~~~~~- 249 (336)
T 3fhr_A 177 FAKETTQNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS--PGMKRRIRLGQ- 249 (336)
T ss_dssp TCEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------
T ss_pred cceeccccc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh--hhHHHhhhccc-
Confidence 997654321 22356799999999998888999999999999999999999999754221110 00000000000
Q ss_pred cchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
..............+.+++.+|++.||.+|||+.|++++-.
T Consensus 250 ------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 290 (336)
T 3fhr_A 250 ------YGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPW 290 (336)
T ss_dssp -------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHH
T ss_pred ------cccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence 00011111223456889999999999999999999999543
No 271
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.2e-36 Score=334.70 Aligned_cols=252 Identities=23% Similarity=0.323 Sum_probs=193.9
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcC--CCceeeEEEEEEeCCeeEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIR--HRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~--hpniv~l~~~~~~~~~~~l 748 (973)
..+|++.+.||+|+||+||+|++.. ++.||||++... ...+.+.+|++++++++ ||||+++++++..++..|+
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred cceEEEEEEecCCCCEEEEEEEcCC-CcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 4578999999999999999999865 889999998653 24467889999999997 5999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccc
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||| +.+++|.+++... ..+++..+..++.|+++||+||| +.+++||||||+||++++ +.+||+|||++..
T Consensus 106 v~e-~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~ 175 (313)
T 3cek_A 106 VME-CGNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQ 175 (313)
T ss_dssp EEC-CCSEEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCSSSCC
T ss_pred EEe-cCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeecccccc
Confidence 999 5588999999753 35788999999999999999999 789999999999999964 8999999999987
Q ss_pred ccCCCCcccccccCCcccccccccccc-----------CCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHH
Q 002061 829 AENSPKVSDYSCFAGTHGYIAPELAYT-----------CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVST 897 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~ 897 (973)
..............||+.|+|||++.+ ..++.++||||||+++|||++|+.||..... . ......
T Consensus 176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~---~-~~~~~~ 251 (313)
T 3cek_A 176 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN---Q-ISKLHA 251 (313)
T ss_dssp --------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS---H-HHHHHH
T ss_pred ccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH---H-HHHHHH
Confidence 654433222334568999999999865 4688899999999999999999999975321 1 111111
Q ss_pred HhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 898 HLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
..... .....+......+.+++.+||+.||.+||++.|++++-.
T Consensus 252 ~~~~~----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~ 295 (313)
T 3cek_A 252 IIDPN----------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 295 (313)
T ss_dssp HHCTT----------SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred HHhcc----------cccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCcc
Confidence 11111 000011111346788999999999999999999998654
No 272
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=7.5e-36 Score=334.80 Aligned_cols=264 Identities=19% Similarity=0.224 Sum_probs=203.5
Q ss_pred HHHHcCCcccCcccccCceEEEEEEecCCC-cEEEEEeeecc-ccHHHHHHHHHHHHhcCCCc------eeeEEEEEEeC
Q 002061 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNA-GTVAVKQLWKG-DGVKVFAAEMEILGKIRHRN------ILKLYACLLKG 743 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~V~~a~~~~~~-~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpn------iv~l~~~~~~~ 743 (973)
....++|++.+.||+|+||+||+|++..++ +.||||++... ...+.+.+|++++++++|++ ++.+++++...
T Consensus 15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 94 (355)
T 2eu9_A 15 DWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH 94 (355)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET
T ss_pred ceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC
Confidence 344578999999999999999999998766 68999998763 34566788999999997765 99999999999
Q ss_pred CeeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeee-----------
Q 002061 744 GSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL----------- 812 (973)
Q Consensus 744 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill----------- 812 (973)
+..++||||+ ++++.+++... ....+++..+..++.|++.||+||| +++|+||||||+||++
T Consensus 95 ~~~~lv~e~~-~~~l~~~l~~~---~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~ 167 (355)
T 2eu9_A 95 GHMCIAFELL-GKNTFEFLKEN---NFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNE 167 (355)
T ss_dssp TEEEEEEECC-CCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECC
T ss_pred CeEEEEEecc-CCChHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecccccccccc
Confidence 9999999999 67777777653 2345899999999999999999999 8899999999999999
Q ss_pred --------cCCCCeEEecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcc
Q 002061 813 --------DEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEE 884 (973)
Q Consensus 813 --------~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~ 884 (973)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 168 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 242 (355)
T 2eu9_A 168 HKSCEEKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 242 (355)
T ss_dssp C-CCCEEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 56789999999999764332 22356899999999999999999999999999999999999999754
Q ss_pred cCCcccHHHHHHHHhccccc-c------ch-hcccc---------------------ccCcchHHHHHHHHHHHHHhcCC
Q 002061 885 YGDGKDIVYWVSTHLNNHEN-V------LK-VLDCE---------------------VASESIKEDMIKLLKIAVVCTTK 935 (973)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~~-~------~~-~~~~~---------------------~~~~~~~~~~~~l~~l~~~cl~~ 935 (973)
. .......+.......+. . .. ..... ............+.+++.+||+.
T Consensus 243 ~--~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~ 320 (355)
T 2eu9_A 243 E--NREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEF 320 (355)
T ss_dssp S--HHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCS
T ss_pred C--HHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcC
Confidence 2 11111111111111000 0 00 00000 00001123355788999999999
Q ss_pred CCCCCCCHHHHHHH
Q 002061 936 LPNLRPPMREVVKM 949 (973)
Q Consensus 936 dP~~Rpt~~evl~~ 949 (973)
||++|||+.|++++
T Consensus 321 dP~~Rpt~~e~l~h 334 (355)
T 2eu9_A 321 DPAQRITLAEALLH 334 (355)
T ss_dssp STTTSCCHHHHTTS
T ss_pred ChhhCcCHHHHhcC
Confidence 99999999999976
No 273
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.9e-36 Score=340.57 Aligned_cols=265 Identities=20% Similarity=0.238 Sum_probs=194.2
Q ss_pred HHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc-------------cHHHHHHHHHHHHhcCCCceeeEEEE
Q 002061 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-------------GVKVFAAEMEILGKIRHRNILKLYAC 739 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-------------~~~~~~~E~~~l~~l~hpniv~l~~~ 739 (973)
...++|++.+.||+|+||+||+|.+.. ++.||||++.... ..+.+.+|++++++++||||++++++
T Consensus 19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 97 (362)
T 3pg1_A 19 AMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDI 97 (362)
T ss_dssp HTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEE
T ss_pred HhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeee
Confidence 445789999999999999999999876 8999999885421 12678999999999999999999999
Q ss_pred EEe-----CCeeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecC
Q 002061 740 LLK-----GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE 814 (973)
Q Consensus 740 ~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~ 814 (973)
+.. ....|+||||++ |+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.
T Consensus 98 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~ 169 (362)
T 3pg1_A 98 FVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ----RIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLAD 169 (362)
T ss_dssp EEECCTTTCCEEEEEEECCS-EEHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECT
T ss_pred EEeccCCCcceEEEEEccCC-CCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEEcC
Confidence 854 236799999996 7888888743 346899999999999999999999 789999999999999999
Q ss_pred CCCeEEecccCcccccCCCCcccccccCCcccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHH
Q 002061 815 DYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVY 893 (973)
Q Consensus 815 ~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~ 893 (973)
++.+||+|||++....... ......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.... ......
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~ 244 (362)
T 3pg1_A 170 NNDITICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST--FYNQLN 244 (362)
T ss_dssp TCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHH
T ss_pred CCCEEEEecCccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC--HHHHHH
Confidence 9999999999997543322 2233568999999999876 678999999999999999999999997531 111111
Q ss_pred HHHHHhcccc----------ccchhcc---ccccC----cchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 894 WVSTHLNNHE----------NVLKVLD---CEVAS----ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 894 ~~~~~~~~~~----------~~~~~~~---~~~~~----~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.+........ ....... ..... .........+.+++.+|++.||++|||+.|+++|-.
T Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 319 (362)
T 3pg1_A 245 KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPY 319 (362)
T ss_dssp HHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred HHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCch
Confidence 1111000000 0000000 00000 011122456889999999999999999999998743
No 274
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=3.1e-37 Score=340.63 Aligned_cols=257 Identities=23% Similarity=0.319 Sum_probs=197.3
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
.++|++.+.||+|+||+||+|++.. .||||++... ...+.+.+|+.++++++||||+++++++..++..++||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 4688999999999999999999864 5999988642 23456778999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccccc
Q 002061 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++++|.+++... ...+++..+..++.|++.||+||| +.+++||||||+||+++ ++.+||+|||+++...
T Consensus 109 e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~ 180 (319)
T 2y4i_B 109 SLCKGRTLYSVVRDA----KIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISG 180 (319)
T ss_dssp BCCCSEEHHHHTTSS----CCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC---
T ss_pred ecccCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCccccc
Confidence 999999999998643 345888999999999999999999 78999999999999998 6799999999987553
Q ss_pred CCC---CcccccccCCcccccccccccc---------CCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHH
Q 002061 831 NSP---KVSDYSCFAGTHGYIAPELAYT---------CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTH 898 (973)
Q Consensus 831 ~~~---~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~ 898 (973)
... .........|++.|+|||++.+ ..++.++||||||+++|||++|+.||.... ........
T Consensus 181 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~ 255 (319)
T 2y4i_B 181 VLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP-----AEAIIWQM 255 (319)
T ss_dssp -------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCC-----HHHHHHHH
T ss_pred cccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHh
Confidence 221 1122233568999999999864 457889999999999999999999997531 11111111
Q ss_pred hccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCC
Q 002061 899 LNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCT 957 (973)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 957 (973)
..... +.... ......+.+++.+||+.||++|||+.+++++|+++....
T Consensus 256 ~~~~~-------~~~~~---~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 256 GTGMK-------PNLSQ---IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp HTTCC-------CCCCC---SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred ccCCC-------CCCCc---CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 11110 00000 012235788999999999999999999999999987654
No 275
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=8.3e-36 Score=336.93 Aligned_cols=264 Identities=21% Similarity=0.252 Sum_probs=202.3
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-ccHHHHHHHHHHHHhcC-----------CCceeeEEEEEEe
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIR-----------HRNILKLYACLLK 742 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~-----------hpniv~l~~~~~~ 742 (973)
..+|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++ ||||+++++++..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 46899999999999999999999999999999998754 34566788999998886 8999999999876
Q ss_pred CC----eeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCC-CeEecCCCCCCeeec----
Q 002061 743 GG----SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSP-PIIHRDIKSSNILLD---- 813 (973)
Q Consensus 743 ~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~-~ivH~Dlkp~Nill~---- 813 (973)
.+ ..++||||+ +++|.+++... ....+++..+..++.|++.||+||| ++ +|+||||||+||+++
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~ 170 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKY---EHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDS 170 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEET
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHh---hccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCC
Confidence 54 789999999 89999999864 2345889999999999999999999 66 999999999999995
Q ss_pred --CCCCeEEecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCc---
Q 002061 814 --EDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDG--- 888 (973)
Q Consensus 814 --~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~--- 888 (973)
..+.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 171 ~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 245 (373)
T 1q8y_A 171 PENLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTK 245 (373)
T ss_dssp TTTEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------C
T ss_pred CcCcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCC
Confidence 3447999999999866432 223468999999999999999999999999999999999999997543211
Q ss_pred --ccHHHHHHHHhccccc--------cchhcc----------cc---------ccCcchHHHHHHHHHHHHHhcCCCCCC
Q 002061 889 --KDIVYWVSTHLNNHEN--------VLKVLD----------CE---------VASESIKEDMIKLLKIAVVCTTKLPNL 939 (973)
Q Consensus 889 --~~~~~~~~~~~~~~~~--------~~~~~~----------~~---------~~~~~~~~~~~~l~~l~~~cl~~dP~~ 939 (973)
......+. .....+. ...++. .. ............+.+++.+||+.||++
T Consensus 246 ~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 324 (373)
T 1q8y_A 246 DDDHIAQIIE-LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRK 324 (373)
T ss_dssp HHHHHHHHHH-HHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTT
T ss_pred hHHHHHHHHH-hcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccc
Confidence 01111111 1100000 000000 00 001123466778999999999999999
Q ss_pred CCCHHHHHHHhh
Q 002061 940 RPPMREVVKMLA 951 (973)
Q Consensus 940 Rpt~~evl~~L~ 951 (973)
|||+.|+++|-.
T Consensus 325 Rpt~~ell~hp~ 336 (373)
T 1q8y_A 325 RADAGGLVNHPW 336 (373)
T ss_dssp CBCHHHHHTCGG
T ss_pred cCCHHHHhhChh
Confidence 999999999643
No 276
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.4e-35 Score=355.64 Aligned_cols=350 Identities=17% Similarity=0.214 Sum_probs=227.0
Q ss_pred CcccccCCCCCCCCCCC---cceeeeCCCCCceEEEeecCCCCCccccccccCCccCcEeeCCCCcccCcCChhhhCCCC
Q 002061 46 PHGVLDSWKESADSPCG---FSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSN 122 (973)
Q Consensus 46 ~~~~~~~W~~~~~~~c~---w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~ 122 (973)
....+++|.++.+||+. |.++.|+. .++-...... ....-..+.+++.|++++|.++...+..++.+++
T Consensus 5 ~~~~l~~~~~~~~C~~~~~~~~c~~~~~------~i~~~~~~~~--~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~ 76 (597)
T 3oja_B 5 QRYNVKPRQPEYKCIDSNLQYDCVFYDV------HIDMQTQDVY--FGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQ 76 (597)
T ss_dssp ------CCCSEECCCCC--CCSEEECSC------EECSSCCCCE--ESCSSGGGCCCSEEEESSCEESEECTHHHHHCCC
T ss_pred ccccccCCCCCCcCcccCcCceeEecCc------eecccccccc--cCcccccCCCceEEEeeCCCCCCcCHHHHccCCC
Confidence 34467899987765444 55555541 1221111111 1112234788999999999998655556888999
Q ss_pred CcEEEecCCcccCCCC-cccCCCCCCEEeccCccCCCccccccccccccceEEccCCcCCCCCCccc-ccCCCCCCEEEc
Q 002061 123 LKVLNVTGNAMVGSVP-DLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPES-IGNLKNLTYLFL 200 (973)
Q Consensus 123 L~~L~L~~n~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~-~~~l~~L~~L~L 200 (973)
|++|+|++|.+.+.++ .|+.+++|++|+|++|.+++..|..|+++++|++|+|++|.+. .+|.. ++++++|++|+|
T Consensus 77 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~--~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 77 VELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS--SLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC--CCCTTTTTTCTTCCEEEC
T ss_pred CcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCC--CCCHHHhccCCCCCEEEe
Confidence 9999999999988776 6899999999999999999888888888888888888888876 44554 577888888888
Q ss_pred ccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccccCCcCCccccccccccEEEeeccccccc
Q 002061 201 AHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGK 280 (973)
Q Consensus 201 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 280 (973)
++|.+++..|..|+.+++|++|+|++|.+++. .++.+++|++|++++|.+++ +...++|+.|++++|.+...
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~ 226 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVV 226 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCEE
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---ChhhhhhhhhhhcccCcccc-----ccCCchhheeeccCCccccc
Confidence 88888877777788888888888888888754 24556777777777777663 23345677777777776533
Q ss_pred cCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCCccccccccccccccccccccccCChhhhhh
Q 002061 281 LPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEK 360 (973)
Q Consensus 281 ~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 360 (973)
.+. + .++|+.|++++|.+++ +..+..+++|+.|+|++|.+++.
T Consensus 227 ~~~-~--~~~L~~L~L~~n~l~~--------------------------~~~l~~l~~L~~L~Ls~N~l~~~-------- 269 (597)
T 3oja_B 227 RGP-V--NVELTILKLQHNNLTD--------------------------TAWLLNYPGLVEVDLSYNELEKI-------- 269 (597)
T ss_dssp ECS-C--CSCCCEEECCSSCCCC--------------------------CGGGGGCTTCSEEECCSSCCCEE--------
T ss_pred ccc-c--CCCCCEEECCCCCCCC--------------------------ChhhccCCCCCEEECCCCccCCC--------
Confidence 222 1 1355555555555553 23344455555555555555432
Q ss_pred hhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEc
Q 002061 361 RKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVL 440 (973)
Q Consensus 361 ~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L 440 (973)
.|..|..+++|++|+|++|.+++ +|..+..+++|+.|+|++|.++++ +..+..+++|+.|+|
T Consensus 270 ----------------~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~~i-~~~~~~l~~L~~L~L 331 (597)
T 3oja_B 270 ----------------MYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLHV-ERNQPQFDRLENLYL 331 (597)
T ss_dssp ----------------ESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCCCC-GGGHHHHTTCSEEEC
T ss_pred ----------------CHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCCcc-CcccccCCCCCEEEC
Confidence 22334445555555555555553 344445556666666666666533 333455677777777
Q ss_pred ccCCCCCCCChhhhcCCCCCEEEccCCcCCC
Q 002061 441 QNNRFSGELPSELGRLTNLERLILTNNNFSG 471 (973)
Q Consensus 441 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 471 (973)
++|+|++. | +..+++|+.|+|++|.+.+
T Consensus 332 ~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~ 359 (597)
T 3oja_B 332 DHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 359 (597)
T ss_dssp CSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred CCCCCCCc-C--hhhcCCCCEEEeeCCCCCC
Confidence 77777643 2 5667888888999888874
No 277
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=4.9e-36 Score=335.79 Aligned_cols=258 Identities=22% Similarity=0.286 Sum_probs=196.3
Q ss_pred cCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc----ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCe------
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGS------ 745 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~------ 745 (973)
.+|.+.+.||+|+||+||+|++..+|+.||||++... ...+.+.+|+.++++++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 5789999999999999999999999999999998653 234567899999999999999999999987654
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccC
Q 002061 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
.|+||||++ |+|.+++.. .+++..+..++.|++.||+||| +++++||||||+||+++.++.+||+|||+
T Consensus 104 ~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL-------KFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS-------CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred EEEEecccc-CCHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeeccc
Confidence 499999996 688776632 3889999999999999999999 78999999999999999999999999999
Q ss_pred cccccCCCCcccccccCCcccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhcccc-
Q 002061 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE- 903 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~- 903 (973)
++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.... ..+....+........
T Consensus 173 ~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--~~~~~~~i~~~~~~~~~ 245 (353)
T 3coi_A 173 ARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD--YLDQLTQILKVTGVPGT 245 (353)
T ss_dssp TTC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSC--HHHHHHHHHHHHCBCCH
T ss_pred ccCCCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCCH
Confidence 9765432 223468999999999876 678999999999999999999999997542 1111111111000000
Q ss_pred ccc-h--------h---ccc---cccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 904 NVL-K--------V---LDC---EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 904 ~~~-~--------~---~~~---~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
... . . ... .............+.+++.+|++.||++|||+.|+++|-.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~ 308 (353)
T 3coi_A 246 EFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 308 (353)
T ss_dssp HHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred HHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcc
Confidence 000 0 0 000 0000111233567889999999999999999999998743
No 278
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1e-36 Score=336.10 Aligned_cols=244 Identities=24% Similarity=0.340 Sum_probs=201.1
Q ss_pred HHHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc--------cHHHHHHHHHHHHhcC--CCceeeEEEEEE
Q 002061 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD--------GVKVFAAEMEILGKIR--HRNILKLYACLL 741 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--------~~~~~~~E~~~l~~l~--hpniv~l~~~~~ 741 (973)
.....+|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|+.++++++ ||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 344568999999999999999999999999999999986632 2245678999999996 599999999999
Q ss_pred eCCeeEEEEEccCC-CchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeec-CCCCeE
Q 002061 742 KGGSSFLVLEYMPN-GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD-EDYEPK 819 (973)
Q Consensus 742 ~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~-~~~~~k 819 (973)
.++..++||||+.+ ++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++ .++.+|
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~k 190 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITER-----GALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELK 190 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEE
T ss_pred cCCcEEEEEEcCCCCccHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEE
Confidence 99999999999976 8999999764 35789999999999999999999 78999999999999999 789999
Q ss_pred EecccCcccccCCCCcccccccCCccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHH
Q 002061 820 IADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKV-SEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTH 898 (973)
Q Consensus 820 l~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~ 898 (973)
|+|||+++...... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||.... ....
T Consensus 191 L~Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------~~~~-- 257 (320)
T 3a99_A 191 LIDFGSGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIR-- 257 (320)
T ss_dssp ECCCTTCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHH--
T ss_pred EeeCcccccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-------hhhc--
Confidence 99999998665432 223568999999999887766 678999999999999999999996531 0100
Q ss_pred hccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 899 LNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.... . .......+.+++.+||+.||++||++.|++++-
T Consensus 258 --~~~~--------~----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp 295 (320)
T 3a99_A 258 --GQVF--------F----RQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 295 (320)
T ss_dssp --CCCC--------C----SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred --cccc--------c----cccCCHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence 0000 0 011234678899999999999999999999864
No 279
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=4.6e-36 Score=331.18 Aligned_cols=280 Identities=17% Similarity=0.210 Sum_probs=212.3
Q ss_pred CCchHHHHHHHHHHHhc-CCCcccccCCC---CCCCCCCCcceeeeCC--------CCCceEEEeecCCCCCcccccccc
Q 002061 27 LSLNVETQALIQFKSKL-KDPHGVLDSWK---ESADSPCGFSGITCDS--------VTGRVTEISFDNKSLSGEISSSIS 94 (973)
Q Consensus 27 ~~~~~~~~aLl~~k~~~-~d~~~~~~~W~---~~~~~~c~w~gv~C~~--------~~~~v~~l~l~~~~l~~~~~~~l~ 94 (973)
.+..+|++||++||+++ .||.+.+++|. ....++|.|.|+.|+. ...+|+.|+|++++++ .+|+.++
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~ 101 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAF 101 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGG
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhh
Confidence 45678999999999998 68888889994 3445689999999952 3478999999999998 8899999
Q ss_pred CCccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCCCCcccCCCCCCEEeccCccCCCccccccccccccceEE
Q 002061 95 ALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLS 174 (973)
Q Consensus 95 ~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 174 (973)
.+++|++|+|++|.++ .+|..++.+++|++|+|++|.++..++.++++++|++|+|++|++.+.+|..+...
T Consensus 102 ~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~------- 173 (328)
T 4fcg_A 102 RLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLRALPASIASLNRLRELSIRACPELTELPEPLAST------- 173 (328)
T ss_dssp GGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCCCCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEE-------
T ss_pred hCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccccCcHHHhcCcCCCEEECCCCCCccccChhHhhc-------
Confidence 9999999999999999 89999999999999999999999777789999999999999998888888766541
Q ss_pred ccCCcCCCCCCcccccCCCCCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccccC
Q 002061 175 IGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLT 254 (973)
Q Consensus 175 l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 254 (973)
.++..+.++++|++|+|++|+++ .+|..++.+++|++|+|++|+++ .+|..+..+++|++|+|++|.+.
T Consensus 174 ---------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~ 242 (328)
T 4fcg_A 174 ---------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTAL 242 (328)
T ss_dssp ---------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTC
T ss_pred ---------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcch
Confidence 12233455666666666666666 55666666666666666666666 34555666666666666666666
Q ss_pred CcCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccC
Q 002061 255 GELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFS 326 (973)
Q Consensus 255 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 326 (973)
+.+|..++.+++|++|+|++|.+.+.+|..+.++++|++|++++|++.+.+|..++.+++|+.+++..|.+.
T Consensus 243 ~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 243 RNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred hhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 666666666677777777776666666666666777777777777766677777777777777766665554
No 280
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2e-36 Score=363.77 Aligned_cols=254 Identities=25% Similarity=0.304 Sum_probs=201.5
Q ss_pred HcCCcccCcccccCceEEEEEEecCC---CcEEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKN---AGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~---~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
..+|++.+.||+|+||+||+|++..+ +..||||+.... ...+.+.+|+.++++++||||+++++++. ++..|+
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~l 467 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 467 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEE
Confidence 46789999999999999999998643 467999987653 23467889999999999999999999985 456899
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccc
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++... ...+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++.
T Consensus 468 v~E~~~~g~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~ 540 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVR----KFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 540 (656)
T ss_dssp EEECCTTCBHHHHHHHT----TTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCS
T ss_pred EEEcCCCCcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCee
Confidence 99999999999999753 335889999999999999999999 78999999999999999999999999999987
Q ss_pred ccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccccch
Q 002061 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
...... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||.... ..+....+... ..
T Consensus 541 ~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~--~~~~~~~i~~~---~~---- 610 (656)
T 2j0j_A 541 MEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK--NNDVIGRIENG---ER---- 610 (656)
T ss_dssp CCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--HHHHHHHHHHT---CC----
T ss_pred cCCCcc-eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCC--HHHHHHHHHcC---CC----
Confidence 644322 12223457789999999998899999999999999999997 999997541 11221111111 00
Q ss_pred hccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002061 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
...+......+.+++.+||+.||++||++.|+++.|+.+
T Consensus 611 -------~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~i 649 (656)
T 2j0j_A 611 -------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649 (656)
T ss_dssp -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -------CCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 001112345688999999999999999999999999875
No 281
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.3e-36 Score=331.19 Aligned_cols=244 Identities=24% Similarity=0.337 Sum_probs=193.7
Q ss_pred HHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc--------cHHHHHHHHHHHHhc----CCCceeeEEEEE
Q 002061 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD--------GVKVFAAEMEILGKI----RHRNILKLYACL 740 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--------~~~~~~~E~~~l~~l----~hpniv~l~~~~ 740 (973)
...++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+|+++++++ +||||+++++++
T Consensus 28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 44568999999999999999999999889999999986532 223456799999998 899999999999
Q ss_pred EeCCeeEEEEEc-cCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeec-CCCCe
Q 002061 741 LKGGSSFLVLEY-MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD-EDYEP 818 (973)
Q Consensus 741 ~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~-~~~~~ 818 (973)
..++..++|||| +++++|.+++... ..+++..+..++.|+++||+||| +.+++||||||+||+++ .++.+
T Consensus 108 ~~~~~~~~v~e~~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~ 179 (312)
T 2iwi_A 108 ETQEGFMLVLERPLPAQDLFDYITEK-----GPLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCA 179 (312)
T ss_dssp -----CEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEE
T ss_pred ecCCeEEEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeE
Confidence 999999999999 7899999999864 24889999999999999999999 77999999999999999 88999
Q ss_pred EEecccCcccccCCCCcccccccCCccccccccccccCCCC-ccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHH
Q 002061 819 KIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVS-EKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVST 897 (973)
Q Consensus 819 kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~ 897 (973)
||+|||++....... .....|+..|+|||++.+..+. .++||||+|+++|||++|+.||.... ....
T Consensus 180 kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~- 247 (312)
T 2iwi_A 180 KLIDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-------EILE- 247 (312)
T ss_dssp EECCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHH-
T ss_pred EEEEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-------HHhh-
Confidence 999999998765432 2335689999999998877665 58999999999999999999996431 0100
Q ss_pred HhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 898 HLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
... . ........+.+++.+||+.||++||++.|++++-.
T Consensus 248 ---~~~--------~----~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~ 286 (312)
T 2iwi_A 248 ---AEL--------H----FPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPW 286 (312)
T ss_dssp ---TCC--------C----CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTT
T ss_pred ---hcc--------C----CcccCCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 000 0 01122346788999999999999999999998654
No 282
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=6.6e-36 Score=329.78 Aligned_cols=252 Identities=24% Similarity=0.334 Sum_probs=181.6
Q ss_pred HHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecccc----HHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEE
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDG----VKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
..++|++.+.||+|+||+||+|++..+++.||||++..... .+.+.++..+++.++||||+++++++..++..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence 45688999999999999999999998899999999876322 22344455678888999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCC-CeEecCCCCCCeeecCCCCeEEecccCccc
Q 002061 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSP-PIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~-~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
|||+ ++.+..+.... ...+++..+..++.|+++||+||| +. +++||||||+||+++.++.+||+|||++..
T Consensus 103 ~e~~-~~~~~~l~~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~ 174 (318)
T 2dyl_A 103 MELM-GTCAEKLKKRM----QGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGR 174 (318)
T ss_dssp ECCC-SEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC--
T ss_pred Eecc-CCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchh
Confidence 9999 55565555432 345889999999999999999999 53 999999999999999999999999999976
Q ss_pred ccCCCCcccccccCCccccccccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhcccc
Q 002061 829 AENSPKVSDYSCFAGTHGYIAPELAY-----TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE 903 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 903 (973)
...... .....||+.|+|||++. +..++.++|||||||++|||++|+.||..... .............
T Consensus 175 ~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~~~~~~~~ 247 (318)
T 2dyl_A 175 LVDDKA---KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT----DFEVLTKVLQEEP 247 (318)
T ss_dssp ---------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS----HHHHHHHHHHSCC
T ss_pred ccCCcc---ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc----cHHHHHHHhccCC
Confidence 543321 22346899999999984 55688999999999999999999999975321 1111121111111
Q ss_pred ccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 904 NVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.. . + ........+.+++.+||+.||.+||++.|++++
T Consensus 248 ~~--~--~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 248 PL--L--P-----GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp CC--C--C-----SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CC--C--C-----ccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 00 0 0 001123457889999999999999999999875
No 283
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.1e-35 Score=341.64 Aligned_cols=256 Identities=22% Similarity=0.324 Sum_probs=187.3
Q ss_pred CCcccCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeeEEEEEccCC
Q 002061 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
.|...+.||+|+||+||.+.. .+|+.||||++..+. .+.+.+|+++++++ +||||+++++++.+++..|+||||++
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~-~~g~~vAvK~~~~~~-~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~- 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGS-FQGRPVAVKRMLIDF-CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN- 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEE-SSSSEEEEEEEEGGG-HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-
T ss_pred eeeccCeEeeCCCeEEEEEEE-ECCeEEEEEEEcHHH-HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-
Confidence 455568899999999987544 458999999886543 45678999999886 89999999999999999999999995
Q ss_pred CchHHHHHhhhcCCCC--CCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCC-------------CCeEE
Q 002061 756 GNLFQALHKRVKEGKP--ELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED-------------YEPKI 820 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~--~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-------------~~~kl 820 (973)
|+|.+++......... ..++..+..++.||+.||+||| +.+|+||||||+||+++.+ +.+||
T Consensus 93 gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL 169 (434)
T 2rio_A 93 LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 169 (434)
T ss_dssp EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEE
T ss_pred CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEEEE
Confidence 7999999764221111 1133345789999999999999 7899999999999999754 47999
Q ss_pred ecccCcccccCCCCcc--cccccCCcccccccccccc-------CCCCccchHHHHHHHHHHHHh-CCCCCCcccCCccc
Q 002061 821 ADFGVAKIAENSPKVS--DYSCFAGTHGYIAPELAYT-------CKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKD 890 (973)
Q Consensus 821 ~Dfgl~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~ 890 (973)
+|||+++......... ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||......
T Consensus 170 ~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--- 246 (434)
T 2rio_A 170 SDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR--- 246 (434)
T ss_dssp CCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH---
T ss_pred cccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh---
Confidence 9999998775432211 1234579999999999865 678999999999999999999 99999654211
Q ss_pred HHHHHHHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002061 891 IVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
......... .. .............++.+++.+|++.||.+|||+.|+++|-
T Consensus 247 ~~~i~~~~~-~~--------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp 297 (434)
T 2rio_A 247 ESNIIRGIF-SL--------DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297 (434)
T ss_dssp HHHHHHTCC-CC--------CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred HHHHhcCCC-Cc--------ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCC
Confidence 111111110 00 0011112345567789999999999999999999999753
No 284
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=4.1e-36 Score=353.16 Aligned_cols=263 Identities=25% Similarity=0.300 Sum_probs=197.2
Q ss_pred HHHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEe------
Q 002061 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLK------ 742 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~------ 742 (973)
....++|++.+.||+|+||+||+|.+..+++.||||++... ...+.+.+|++++++++||||+++++++..
T Consensus 10 g~~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~ 89 (676)
T 3qa8_A 10 TQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAP 89 (676)
T ss_dssp -------CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCT
T ss_pred CCCCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccC
Confidence 34457899999999999999999999999999999988653 345668899999999999999999998755
Q ss_pred CCeeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCC---eE
Q 002061 743 GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE---PK 819 (973)
Q Consensus 743 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~---~k 819 (973)
++..|+||||+++|+|.+++... .....+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +|
T Consensus 90 ~~~~~LVmEy~~ggsL~~~L~~~--~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vK 164 (676)
T 3qa8_A 90 NDLPLLAMEYCEGGDLRKYLNQF--ENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHK 164 (676)
T ss_dssp TSSCCCEEECCSSCBHHHHHHSS--SCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEE
T ss_pred CCeEEEEEEeCCCCCHHHHHHhc--ccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEE
Confidence 66789999999999999999864 22335788889999999999999999 789999999999999997765 99
Q ss_pred EecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHh
Q 002061 820 IADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHL 899 (973)
Q Consensus 820 l~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~ 899 (973)
|+|||.+........ .....||+.|+|||++.+..++.++||||+||++|||++|+.||.... ....|.....
T Consensus 165 L~DFG~a~~~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~----~~~~~~~~i~ 237 (676)
T 3qa8_A 165 IIDLGYAKELDQGEL---CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW----QPVQWHGKVR 237 (676)
T ss_dssp ECSCCCCCBTTSCCC---CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC----HHHHSSTTCC
T ss_pred Ecccccccccccccc---cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc----chhhhhhhhh
Confidence 999999987654322 233578999999999999999999999999999999999999996431 1111100000
Q ss_pred cccc---ccchhccc--------cccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHH
Q 002061 900 NNHE---NVLKVLDC--------EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREV 946 (973)
Q Consensus 900 ~~~~---~~~~~~~~--------~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~ev 946 (973)
.... ........ .............+.+++.+|+++||++|||+.|+
T Consensus 238 ~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 238 EKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp ------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred cccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 0000 00000000 00111233456778999999999999999999773
No 285
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=4.4e-34 Score=319.29 Aligned_cols=304 Identities=22% Similarity=0.317 Sum_probs=157.9
Q ss_pred CCCCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccccCCcCCccccccccccEEE
Q 002061 192 LKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFD 271 (973)
Q Consensus 192 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 271 (973)
+++|++|++++|.++. ++ .+..+++|++|++++|++++. +. +..+++|++|++++|.+++ ++ .+..+++|++|+
T Consensus 43 l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~ 116 (347)
T 4fmz_A 43 LESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELY 116 (347)
T ss_dssp HTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEE
T ss_pred cccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEE
Confidence 3444444444444442 22 244444444444444444422 22 4444444444444444442 22 344555555555
Q ss_pred eeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCCccccccccccccccccccccc
Q 002061 272 ISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSG 351 (973)
Q Consensus 272 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~ 351 (973)
+++|.+.+..+ +..+++|+.|++++|.....++ .+..+++|+.|++++|.+.+..+ +..+++|++|++++|.+++
T Consensus 117 l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~ 191 (347)
T 4fmz_A 117 LNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED 191 (347)
T ss_dssp CTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC
T ss_pred CcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc
Confidence 55555543221 4445555555555553332222 24555555555555555543322 5555556666666655542
Q ss_pred cCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCC
Q 002061 352 SFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGL 431 (973)
Q Consensus 352 ~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 431 (973)
. +. +..+++|++|++++|.+++..+ +..+++|+.|++++|++++..+ +..
T Consensus 192 ~-------------------------~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~ 241 (347)
T 4fmz_A 192 I-------------------------SP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LAN 241 (347)
T ss_dssp C-------------------------GG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTT
T ss_pred c-------------------------cc-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhc
Confidence 1 11 3445566666666666654333 5555566666666665554433 455
Q ss_pred CCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchh
Q 002061 432 STSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLN 511 (973)
Q Consensus 432 ~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 511 (973)
+++|++|++++|++++. ..+..+++|++|++++|++++. ..+..+++|++|++++|++++..|..++++++|+.|+
T Consensus 242 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 317 (347)
T 4fmz_A 242 LSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLF 317 (347)
T ss_dssp CTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEE
T ss_pred CCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEE
Confidence 56666666666666532 3456666666666666666643 2456666666666666666666666666666666666
Q ss_pred ccccccccCCCccccccCCCCeeecCCCccC
Q 002061 512 LARNSLSGNIPRSLSLLSSLNALNLSGNKLT 542 (973)
Q Consensus 512 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 542 (973)
|++|++++..| +..+++|+.|++++|+|+
T Consensus 318 L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 318 LSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred ccCCccccccC--hhhhhccceeehhhhccc
Confidence 66666665444 556666666666666654
No 286
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.9e-35 Score=338.38 Aligned_cols=250 Identities=22% Similarity=0.334 Sum_probs=183.5
Q ss_pred cCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeeEEEEEccC
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
.+|+..+.||+|+||+||... ..+++.||||++..+. ...+.+|+++++++ +||||+++++++.++...|+||||++
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~-~~~~~~vAvK~~~~~~-~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~ 101 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRG-MFDNRDVAVKRILPEC-FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA 101 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEE-ESSSSEEEEEEECTTT-EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred EEEecCCeeecCcCEEEEEEE-EeCCeEEEEEEECHHH-HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence 357888999999999966433 3458899999986532 23357899999999 89999999999999999999999995
Q ss_pred CCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecC-----CCCeEEecccCcccc
Q 002061 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE-----DYEPKIADFGVAKIA 829 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~-----~~~~kl~Dfgl~~~~ 829 (973)
|+|.+++.... ....+..+..++.|+++||+||| +.+|+||||||+||+++. ...+||+|||+++..
T Consensus 102 -g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~ 173 (432)
T 3p23_A 102 -ATLQEYVEQKD----FAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL 173 (432)
T ss_dssp -EEHHHHHHSSS----CCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred -CCHHHHHHhcC----CCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence 69999997541 22333455689999999999999 789999999999999953 235889999999876
Q ss_pred cCCCCc-ccccccCCccccccccccc---cCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCcccHHHHHHHHhccccc
Q 002061 830 ENSPKV-SDYSCFAGTHGYIAPELAY---TCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 830 ~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
...... .......||+.|+|||++. +..++.++||||+||++|||++ |..||..... ... ........
T Consensus 174 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~---~~~---~~~~~~~~- 246 (432)
T 3p23_A 174 AVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ---RQA---NILLGACS- 246 (432)
T ss_dssp ------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT---HHH---HHHTTCCC-
T ss_pred cCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH---HHH---HHHhccCC-
Confidence 533211 2233457999999999997 4567889999999999999999 9999964311 111 11111000
Q ss_pred cchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.... .........+.+++.+||+.||.+|||+.|+++|
T Consensus 247 -~~~~------~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 247 -LDCL------HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp -CTTS------CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -cccc------CccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 0000 0112234457789999999999999999999965
No 287
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.1e-33 Score=315.91 Aligned_cols=307 Identities=24% Similarity=0.391 Sum_probs=148.8
Q ss_pred hhCCCCCcEEEecCCcccCCCCcccCCCCCCEEeccCccCCCccccccccccccceEEccCCcCCCCCCcccccCCCCCC
Q 002061 117 LSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLT 196 (973)
Q Consensus 117 l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~ 196 (973)
+..+++|++|++++|.+... +.+..+++|++|++++|.+++..+ +..+++|++|++++|.+.. + +.+.++++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~~~-~~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~--~-~~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVASI-QGIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD--I-SALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC--C-GGGTTCTTCS
T ss_pred chhcccccEEEEeCCccccc-hhhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC--c-hHHcCCCcCC
Confidence 34455555555555555443 235555566666666665553322 4455555555555554432 2 2466667777
Q ss_pred EEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccccCCcCCccccccccccEEEeeccc
Q 002061 197 YLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQ 276 (973)
Q Consensus 197 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~ 276 (973)
+|++++|++++. +. +..+++|++|++++|......+ .+..+++|++|++++|.+++..+ +..+++|++|++++|.
T Consensus 114 ~L~l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~ 188 (347)
T 4fmz_A 114 ELYLNEDNISDI-SP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQ 188 (347)
T ss_dssp EEECTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSC
T ss_pred EEECcCCcccCc-hh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCc
Confidence 777777777643 22 6666666666666664442322 25555555555555555553222 4455555555555555
Q ss_pred cccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCCccccccccccccccccccccccCChh
Q 002061 277 MYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKY 356 (973)
Q Consensus 277 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~ 356 (973)
+.+..+ +..+++|+.|++++| .+.+..+ +..+++|++|++++|++++
T Consensus 189 l~~~~~--~~~l~~L~~L~l~~n------------------------~l~~~~~--~~~~~~L~~L~l~~n~l~~----- 235 (347)
T 4fmz_A 189 IEDISP--LASLTSLHYFTAYVN------------------------QITDITP--VANMTRLNSLKIGNNKITD----- 235 (347)
T ss_dssp CCCCGG--GGGCTTCCEEECCSS------------------------CCCCCGG--GGGCTTCCEEECCSSCCCC-----
T ss_pred cccccc--ccCCCccceeecccC------------------------CCCCCch--hhcCCcCCEEEccCCccCC-----
Confidence 442211 333444444444444 3332222 3444444444444444441
Q ss_pred hhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCC
Q 002061 357 LCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLS 436 (973)
Q Consensus 357 ~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~ 436 (973)
++. +..+++|++|++++|.+++. ..+..+ ++|+
T Consensus 236 --------------------~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l------------------------~~L~ 268 (347)
T 4fmz_A 236 --------------------LSP-LANLSQLTWLEIGTNQISDI--NAVKDL------------------------TKLK 268 (347)
T ss_dssp --------------------CGG-GTTCTTCCEEECCSSCCCCC--GGGTTC------------------------TTCC
T ss_pred --------------------Ccc-hhcCCCCCEEECCCCccCCC--hhHhcC------------------------CCcC
Confidence 111 33444555555555555431 233334 4444
Q ss_pred EEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhccccc
Q 002061 437 QLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNS 516 (973)
Q Consensus 437 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 516 (973)
+|++++|++++. ..+..+++|+.|+|++|++++..|..+..+++|++|+|++|++++..| +..+++|+.|++++|.
T Consensus 269 ~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 269 MLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQV 344 (347)
T ss_dssp EEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC-
T ss_pred EEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhc
Confidence 444444444432 234445555555555555554444445555555555555555554333 4445555555555555
Q ss_pred cc
Q 002061 517 LS 518 (973)
Q Consensus 517 l~ 518 (973)
|+
T Consensus 345 i~ 346 (347)
T 4fmz_A 345 IK 346 (347)
T ss_dssp --
T ss_pred cc
Confidence 43
No 288
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=8.1e-35 Score=314.74 Aligned_cols=230 Identities=10% Similarity=0.054 Sum_probs=184.0
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc-----cHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEEE
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
.++|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|++.+++++||||+++++++..++..|+|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 367999999999999999999999999999999987632 236788999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccc
Q 002061 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++++|.+++... ....++..++.|++.||+||| +++|+||||||+||+++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~-------~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~----- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS-------PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPA----- 174 (286)
T ss_dssp EECCCEEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCC-----
T ss_pred EEecCCCCHHHHHhcC-------CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecc-----
Confidence 9999999999998532 244567889999999999999 7899999999999999999999998543
Q ss_pred cCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhc
Q 002061 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
|++ .++.++|||||||++|||++|+.||......... .......
T Consensus 175 -----------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~------------~~~~~~~ 218 (286)
T 3uqc_A 175 -----------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGL------------APAERDT 218 (286)
T ss_dssp -----------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCS------------EECCBCT
T ss_pred -----------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhh------------HHHHHHh
Confidence 333 2688999999999999999999999764221100 0000000
Q ss_pred ccccc--CcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCC
Q 002061 910 DCEVA--SESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPC 956 (973)
Q Consensus 910 ~~~~~--~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 956 (973)
..... ..........+.+++.+||+.||++| |+.|+++.|+++...
T Consensus 219 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 219 AGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp TSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred ccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 01000 01112234568899999999999999 999999999986543
No 289
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=3.8e-34 Score=312.48 Aligned_cols=234 Identities=22% Similarity=0.286 Sum_probs=183.3
Q ss_pred HHcCCccc-CcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHH-HhcCCCceeeEEEEEEe----CCeeE
Q 002061 674 QICNLEED-NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEIL-GKIRHRNILKLYACLLK----GGSSF 747 (973)
Q Consensus 674 ~~~~~~~~-~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l-~~l~hpniv~l~~~~~~----~~~~~ 747 (973)
..++|.+. +.||+|+||+||+|.+..+++.||||++... ..+.+|++++ +..+||||+++++++.. +...+
T Consensus 15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc---HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 45677777 7799999999999999999999999998643 4567889888 55699999999999877 67789
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecC---CCCeEEeccc
Q 002061 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE---DYEPKIADFG 824 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~Dfg 824 (973)
+||||+++|+|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||
T Consensus 92 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg 165 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDR---GDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFG 165 (299)
T ss_dssp EEECCCCSCBHHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred EEEeecCCCcHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEeccc
Confidence 999999999999999864 2345899999999999999999999 789999999999999998 7889999999
Q ss_pred CcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccc
Q 002061 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
++.... +..++.++||||+||++|||++|+.||........ ....
T Consensus 166 ~a~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~---------~~~~-- 210 (299)
T 3m2w_A 166 FAKETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI---------SPGM-- 210 (299)
T ss_dssp TCEECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC----------------CCS--
T ss_pred cccccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh---------hHHH--
Confidence 886432 23467789999999999999999999965421100 0000
Q ss_pred cchhcccc--ccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002061 905 VLKVLDCE--VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 905 ~~~~~~~~--~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
...+.... ............+.+++.+||+.||++|||+.|++++-.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~ 259 (299)
T 3m2w_A 211 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW 259 (299)
T ss_dssp CCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred HHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChh
Confidence 00000010 111111233567889999999999999999999998644
No 290
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.2e-34 Score=349.93 Aligned_cols=238 Identities=22% Similarity=0.327 Sum_probs=191.9
Q ss_pred HHcCCcccCcccccCceEEEEEEecC-CCcEEEEEeeecc---ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCe----
Q 002061 674 QICNLEEDNLIGSGGTGKVYRLDLKK-NAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGS---- 745 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~V~~a~~~~-~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~---- 745 (973)
..++|++.+.||+|+||+||+|++.. +++.||||++... .....+.+|++++++++||||+++++++...+.
T Consensus 78 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 78 VAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred eCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 34689999999999999999999975 6899999988653 334567899999999999999999999987655
Q ss_pred -eEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEeccc
Q 002061 746 -SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFG 824 (973)
Q Consensus 746 -~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 824 (973)
.|+||||+++++|.+++.. .+++..+..++.||++||+||| +++|+||||||+||+++.+ .+||+|||
T Consensus 158 ~~~lv~E~~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG 226 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLG 226 (681)
T ss_dssp EEEEEEECCCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCT
T ss_pred eeEEEEEeCCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecc
Confidence 6999999999999887652 5899999999999999999999 7899999999999999986 89999999
Q ss_pred CcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCcccHHHHHHHHhccccc
Q 002061 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
+++..... ....||+.|+|||++.+.. +.++|||||||++|+|++|..||........
T Consensus 227 ~a~~~~~~------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~--------------- 284 (681)
T 2pzi_A 227 AVSRINSF------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL--------------- 284 (681)
T ss_dssp TCEETTCC------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC---------------
T ss_pred cchhcccC------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc---------------
Confidence 99866433 2356899999999987654 8899999999999999999988865321100
Q ss_pred cchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCC-HHHHHHHhhc
Q 002061 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPP-MREVVKMLAD 952 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-~~evl~~L~~ 952 (973)
. ...........+.+++.+||++||++||+ +.++.+.+..
T Consensus 285 -~-------~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 285 -P-------EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp -C-------TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred -c-------ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 0 01112233456889999999999999995 4555554443
No 291
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=9.8e-33 Score=306.04 Aligned_cols=288 Identities=23% Similarity=0.325 Sum_probs=144.6
Q ss_pred CCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccccCCcCCccccccccccEEEee
Q 002061 194 NLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDIS 273 (973)
Q Consensus 194 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls 273 (973)
+++.+++++|.++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 3455555555554 3343332 345555555555554444455555555555555555554445555555555555555
Q ss_pred ccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccC--CCCCccccccccccccccccccccc
Q 002061 274 SNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFS--GPFPENLGRYTALTDVDISENQFSG 351 (973)
Q Consensus 274 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~--~~~~~~l~~l~~L~~L~Ls~N~l~~ 351 (973)
+|+++ .+|..+. ++|++|++++|++++..+..|..+++|+.|++++|.++ +..+..+..+ +|++|++++|++++
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 55555 3333333 45555555555555444444555555555555555553 2344444444 55556666655552
Q ss_pred cCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCC
Q 002061 352 SFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGL 431 (973)
Q Consensus 352 ~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 431 (973)
+| ..+. ++|++|+|++|++++..+..|..+++|+.|++++|++++.
T Consensus 187 -l~------------------------~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~------- 232 (332)
T 2ft3_A 187 -IP------------------------KDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMI------- 232 (332)
T ss_dssp -CC------------------------SSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCC-------
T ss_pred -cC------------------------cccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcC-------
Confidence 22 1111 3555555555555554445554454444444444444444
Q ss_pred CCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCcccccc------c
Q 002061 432 STSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDC------A 505 (973)
Q Consensus 432 ~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l------~ 505 (973)
.+..+..+++|++|+|++|+++ .+|..+..+++|++|++++|++++..+..|..+ .
T Consensus 233 -----------------~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~ 294 (332)
T 2ft3_A 233 -----------------ENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRA 294 (332)
T ss_dssp -----------------CTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSC
T ss_pred -----------------ChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccc
Confidence 4444444555555555555554 444445555555555555555554444444332 3
Q ss_pred cccchhccccccc--cCCCccccccCCCCeeecCCCc
Q 002061 506 RIVDLNLARNSLS--GNIPRSLSLLSSLNALNLSGNK 540 (973)
Q Consensus 506 ~L~~L~Ls~N~l~--~~~~~~~~~l~~L~~L~L~~N~ 540 (973)
.|+.|++++|.+. +..|..|..+++|+.|+|++|+
T Consensus 295 ~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 295 YYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred cccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 4556666666655 4555666666666666666663
No 292
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.8e-34 Score=327.60 Aligned_cols=243 Identities=15% Similarity=0.134 Sum_probs=180.9
Q ss_pred cCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc-----ccHHHHHHHHHHHHhcCC-Cc---------eee-----
Q 002061 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRH-RN---------ILK----- 735 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h-pn---------iv~----- 735 (973)
..|...+.||+|+||+||+|++..+|+.||||++... ...+.+.+|+.+++.++| ++ ++.
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 3467788999999999999999999999999988732 235678899999999976 21 111
Q ss_pred -------EEEEEEe-----CCeeEEEEEccCCCchHHHHHhhh--cCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeE
Q 002061 736 -------LYACLLK-----GGSSFLVLEYMPNGNLFQALHKRV--KEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPII 801 (973)
Q Consensus 736 -------l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~iv 801 (973)
++.++.. ....+++|+++ +++|.+++.... ......+++..+..++.|+++||+||| +++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcc
Confidence 1111111 22457777766 789999985321 122345788899999999999999999 78999
Q ss_pred ecCCCCCCeeecCCCCeEEecccCcccccCCCCcccccccCCcccccccccc----------ccCCCCccchHHHHHHHH
Q 002061 802 HRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELA----------YTCKVSEKSDVFSFGVVL 871 (973)
Q Consensus 802 H~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DvwslG~~l 871 (973)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 9999999999999999999999998765432 233467 999999998 555688999999999999
Q ss_pred HHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhccccccCcchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002061 872 LELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 872 ~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
|||++|+.||....... ....++... ......+.+++.+||+.||++||++.|++++
T Consensus 308 ~elltg~~Pf~~~~~~~---------------~~~~~~~~~------~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 308 YWIWCADLPNTDDAALG---------------GSEWIFRSC------KNIPQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp HHHHHSSCCCCTTGGGS---------------CSGGGGSSC------CCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHCCCCCCCcchhh---------------hHHHHHhhc------ccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 99999999997542110 011111100 0123568899999999999999998777543
No 293
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.8e-32 Score=303.90 Aligned_cols=287 Identities=19% Similarity=0.257 Sum_probs=200.0
Q ss_pred CCCeeecccccccCCCchhhhccccccEEEeeccccCCcCCccccccccccEEEeeccccccccCCccCCCCCccEEEcc
Q 002061 218 ELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCF 297 (973)
Q Consensus 218 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 297 (973)
+++.+++++|.++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..+.++++|++|+++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 4666666666665 4454442 456666666666665445556666666666666666665555556666666666666
Q ss_pred cCCCCCCCCCCcCCcccceeeeccCCccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCc
Q 002061 298 KNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEV 377 (973)
Q Consensus 298 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~ 377 (973)
+|+++ .+|..+. ++|++|++++|++++..+..+
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~-------------------------------------------- 143 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVF-------------------------------------------- 143 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGG--------------------------------------------
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHh--------------------------------------------
Confidence 66555 2333222 444444444444443333334
Q ss_pred cccccCccccceEeccccccc--cCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhc
Q 002061 378 PNSYADCKTIQRLRISDNHLS--GKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGR 455 (973)
Q Consensus 378 p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~ 455 (973)
.++++|++|++++|.++ +..|..+..+ +|+.|++++|++++.+... .++|++|+|++|++++..+..+..
T Consensus 144 ----~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~---~~~L~~L~l~~n~i~~~~~~~l~~ 215 (332)
T 2ft3_A 144 ----SGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDL---PETLNELHLDHNKIQAIELEDLLR 215 (332)
T ss_dssp ----SSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSS---CSSCSCCBCCSSCCCCCCTTSSTT
T ss_pred ----CCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCccc---cCCCCEEECCCCcCCccCHHHhcC
Confidence 44555555555555553 2445555555 6666666666666544322 268899999999999888889999
Q ss_pred CCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhccccccccCCCccccc------cC
Q 002061 456 LTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSL------LS 529 (973)
Q Consensus 456 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~------l~ 529 (973)
+++|+.|+|++|++++..+..|..+++|++|+|++|+++ .+|..+..+++|+.|++++|+|++..+..|.. ..
T Consensus 216 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~ 294 (332)
T 2ft3_A 216 YSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRA 294 (332)
T ss_dssp CTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSC
T ss_pred CCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccc
Confidence 999999999999999888889999999999999999999 78888999999999999999999887777765 36
Q ss_pred CCCeeecCCCccC--CCCChhhhccc-CceEEccCCc
Q 002061 530 SLNALNLSGNKLT--GSIPDNLMKLK-LSSIDLSENQ 563 (973)
Q Consensus 530 ~L~~L~L~~N~l~--~~~p~~l~~l~-L~~l~ls~N~ 563 (973)
+|+.|++++|++. +..|..+..++ |+.+++++|+
T Consensus 295 ~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 295 YYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred cccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 7999999999998 67788888886 9999999985
No 294
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=2.8e-32 Score=302.18 Aligned_cols=274 Identities=19% Similarity=0.261 Sum_probs=122.4
Q ss_pred CCCeeecccccccCCCchhhhccccccEEEeeccccCCcCCccccccccccEEEeeccccccccCCccCCCCCccEEEcc
Q 002061 218 ELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCF 297 (973)
Q Consensus 218 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 297 (973)
+|++|+|++|+|++..+..|+++++|++|+|++|.+++..|..|.++++|++|+|++|+++ .+|..+. ++|+.|+++
T Consensus 53 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~ 129 (330)
T 1xku_A 53 DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVH 129 (330)
T ss_dssp TCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECC
T ss_pred CCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECC
Confidence 3444444444444333333444444444444444444333444444444444444444444 2333222 344444444
Q ss_pred cCCCCCCCCCCcCCcccceeeeccCCccCC--CCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCC
Q 002061 298 KNNFSGEFPSGFGDMRKLFAFSIYGNRFSG--PFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSG 375 (973)
Q Consensus 298 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~ 375 (973)
+|++++..+..|..+++|+.|++++|.+.. ..+..+..+++|++|++++|.++. +|
T Consensus 130 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~--------------------- 187 (330)
T 1xku_A 130 ENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IP--------------------- 187 (330)
T ss_dssp SSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CC---------------------
T ss_pred CCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CC---------------------
Confidence 444443333334444444444444444431 334444555555555555555541 11
Q ss_pred CccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhc
Q 002061 376 EVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGR 455 (973)
Q Consensus 376 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~ 455 (973)
..+. ++|++|+|++|++++..|..|..+++|+.|++++|++++..+..+..+++|++|+|++|+++ .+|..+..
T Consensus 188 ---~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 261 (330)
T 1xku_A 188 ---QGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLAD 261 (330)
T ss_dssp ---SSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTT
T ss_pred ---cccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhcc
Confidence 1111 45555666666655555555555555555555555554444444444445555555555554 34444444
Q ss_pred CCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhcccccccc--CCCccccccCCCCe
Q 002061 456 LTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSG--NIPRSLSLLSSLNA 533 (973)
Q Consensus 456 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~ 533 (973)
+++|++|+|++|+|++..+..|..... ......|+.|++++|.+.. ..|..|..+.+++.
T Consensus 262 l~~L~~L~l~~N~i~~~~~~~f~~~~~------------------~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~ 323 (330)
T 1xku_A 262 HKYIQVVYLHNNNISAIGSNDFCPPGY------------------NTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAA 323 (330)
T ss_dssp CSSCCEEECCSSCCCCCCTTSSSCSSC------------------CTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGG
T ss_pred CCCcCEEECCCCcCCccChhhcCCccc------------------ccccccccceEeecCcccccccCccccccccceeE
Confidence 555555555555554443333332100 0011344455555555432 34455555666666
Q ss_pred eecCCCc
Q 002061 534 LNLSGNK 540 (973)
Q Consensus 534 L~L~~N~ 540 (973)
++|++|+
T Consensus 324 l~L~~N~ 330 (330)
T 1xku_A 324 VQLGNYK 330 (330)
T ss_dssp EEC----
T ss_pred EEecccC
Confidence 6666553
No 295
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=4.7e-32 Score=300.35 Aligned_cols=288 Identities=19% Similarity=0.250 Sum_probs=186.5
Q ss_pred CCCeeecccccccCCCchhhhccccccEEEeeccccCCcCCccccccccccEEEeeccccccccCCccCCCCCccEEEcc
Q 002061 218 ELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCF 297 (973)
Q Consensus 218 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 297 (973)
+++.++++++.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..|..+.++++|++|+++
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 4555555555555 3443332 456666666666665555556666666666666666665556666666666666666
Q ss_pred cCCCCCCCCCCcCCcccceeeeccCCccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCc
Q 002061 298 KNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEV 377 (973)
Q Consensus 298 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~ 377 (973)
+|+++ .+|..+. ++|+.|++++|++++..+..+.
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~------------------------------------------- 142 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFN------------------------------------------- 142 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHT-------------------------------------------
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhc-------------------------------------------
Confidence 66665 2333222 3444444444444433333344
Q ss_pred cccccCccccceEeccccccc--cCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhc
Q 002061 378 PNSYADCKTIQRLRISDNHLS--GKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGR 455 (973)
Q Consensus 378 p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~ 455 (973)
++++|++|++++|+++ +..+..+..+++|+.|++++|+++..+... .++|++|+|++|++++..|..|..
T Consensus 143 -----~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~---~~~L~~L~l~~n~l~~~~~~~~~~ 214 (330)
T 1xku_A 143 -----GLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGL---PPSLTELHLDGNKITKVDAASLKG 214 (330)
T ss_dssp -----TCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSC---CTTCSEEECTTSCCCEECTGGGTT
T ss_pred -----CCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCccc---cccCCEEECCCCcCCccCHHHhcC
Confidence 4455555555555553 244555556666666666666665543322 267888888888888777778888
Q ss_pred CCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhccccccccCCCccccc------cC
Q 002061 456 LTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSL------LS 529 (973)
Q Consensus 456 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~------l~ 529 (973)
+++|++|+|++|++++..+..+..+++|++|+|++|+++ .+|..+..+++|+.|+|++|+|++..+..|.. .+
T Consensus 215 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~ 293 (330)
T 1xku_A 215 LNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKA 293 (330)
T ss_dssp CTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSC
T ss_pred CCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccc
Confidence 888888888888887766677888888888888888887 66777888888888888888888766666653 47
Q ss_pred CCCeeecCCCccCC--CCChhhhccc-CceEEccCCc
Q 002061 530 SLNALNLSGNKLTG--SIPDNLMKLK-LSSIDLSENQ 563 (973)
Q Consensus 530 ~L~~L~L~~N~l~~--~~p~~l~~l~-L~~l~ls~N~ 563 (973)
.|+.|++++|++.. ..|..+..+. ++.++|++|+
T Consensus 294 ~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 294 SYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred cccceEeecCcccccccCccccccccceeEEEecccC
Confidence 89999999999973 5667777775 9999999985
No 296
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.98 E-value=6.5e-34 Score=316.19 Aligned_cols=243 Identities=15% Similarity=0.151 Sum_probs=186.2
Q ss_pred HcCCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc----------cHHHHHHHHHHHHhcC---------CCceee
Q 002061 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----------GVKVFAAEMEILGKIR---------HRNILK 735 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----------~~~~~~~E~~~l~~l~---------hpniv~ 735 (973)
.++|++.+.||+|+||+||+|++ +++.||||++.... ..+.+.+|++++++++ ||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 46789999999999999999998 48999999987532 2377899999999886 777777
Q ss_pred EEEEEE------------------------------eCCeeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 002061 736 LYACLL------------------------------KGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGA 785 (973)
Q Consensus 736 l~~~~~------------------------------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i 785 (973)
+.+++. .++..|+||||+++|++.+.+.+ ..+++..+..++.|+
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi 170 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQL 170 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHH
Confidence 777643 26789999999999977666532 347899999999999
Q ss_pred HHHHhhhhhcCCCCeEecCCCCCCeeecCCC--------------------CeEEecccCcccccCCCCcccccccCCcc
Q 002061 786 AKGIAYLHHDCSPPIIHRDIKSSNILLDEDY--------------------EPKIADFGVAKIAENSPKVSDYSCFAGTH 845 (973)
Q Consensus 786 a~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~--------------------~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~ 845 (973)
+.||+|||+ +++|+||||||+|||++.++ .+||+|||+++..... ...||+
T Consensus 171 ~~aL~~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~ 241 (336)
T 2vuw_A 171 TASLAVAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCD 241 (336)
T ss_dssp HHHHHHHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCC
T ss_pred HHHHHHHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEee
Confidence 999999993 35899999999999999887 8999999999866532 246899
Q ss_pred ccccccccccCCCCccchHHHHHHH-HHHHHhCCCCCCcccCCcccHHHHHHHHhccccccchhccccccCcchHHHHHH
Q 002061 846 GYIAPELAYTCKVSEKSDVFSFGVV-LLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIK 924 (973)
Q Consensus 846 ~y~aPE~~~~~~~~~~~DvwslG~~-l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (973)
.|+|||++.+.. +.++||||+|++ .+++++|..||.... ............. .................
T Consensus 242 ~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~----~~~~~~~~~~~~~-----~~~~~~~~~~~~~~s~~ 311 (336)
T 2vuw_A 242 VSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVL----WLHYLTDKMLKQM-----TFKTKCNTPAMKQIKRK 311 (336)
T ss_dssp CTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHH----HHHHHHHHHHHTC-----CCSSCCCSHHHHHHHHH
T ss_pred cccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchh----hhhHHHHhhhhhh-----ccCcccchhhhhhcCHH
Confidence 999999998766 889999998777 778899999985320 0000111111000 00111122334567788
Q ss_pred HHHHHHHhcCCCCCCCCCHHHHH-HH
Q 002061 925 LLKIAVVCTTKLPNLRPPMREVV-KM 949 (973)
Q Consensus 925 l~~l~~~cl~~dP~~Rpt~~evl-~~ 949 (973)
+.+++.+|++.| |+.|++ +|
T Consensus 312 ~~dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 312 IQEFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHHHHHGGGSS-----SHHHHHHHC
T ss_pred HHHHHHHHhccC-----CHHHHHhcC
Confidence 999999999976 999998 65
No 297
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.98 E-value=1e-32 Score=302.57 Aligned_cols=250 Identities=29% Similarity=0.482 Sum_probs=131.6
Q ss_pred CCCCeeecccccccC--CCchhhhccccccEEEeec-cccCCcCCccccccccccEEEeeccccccccCCccCCCCCccE
Q 002061 217 RELGTLDICRNKISG--EFPRSIRKLQKLWKIELYA-NNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTV 293 (973)
Q Consensus 217 ~~L~~L~L~~N~l~~--~~~~~l~~l~~L~~L~L~~-N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 293 (973)
.+++.|+|++|.+++ .+|..++++++|++|+|++ |.+++.+|..|+++++|++|+|++|++++.+|..+.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 356667777777766 6666677777777777763 6666666666666666777777766666666666666666666
Q ss_pred EEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccC
Q 002061 294 FQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNF 373 (973)
Q Consensus 294 L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~ 373 (973)
|++++|.+++.+|..++.+++|++|++++|++++.+|..+..++
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~------------------------------------ 173 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFS------------------------------------ 173 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCC------------------------------------
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhh------------------------------------
Confidence 66666666655555555555555555555555444444444443
Q ss_pred CCCccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhh
Q 002061 374 SGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSEL 453 (973)
Q Consensus 374 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~ 453 (973)
++|++|+|++|++++.+|..+..++ |+.|++++|++++..+..+..+++|+.|+|++|++++.+|. +
T Consensus 174 -----------~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~ 240 (313)
T 1ogq_A 174 -----------KLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-V 240 (313)
T ss_dssp -----------TTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-C
T ss_pred -----------hcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-c
Confidence 1344444444444444444443332 33333333333332333333334444444444444433222 3
Q ss_pred hcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhccccc
Q 002061 454 GRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNS 516 (973)
Q Consensus 454 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 516 (973)
..+++|++|+|++|++++.+|..|..+++|++|+|++|++++.+|.. +.+++|+.|++++|+
T Consensus 241 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 241 GLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp CCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred cccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 44445555555555554444555555555555555555555444443 444445555555544
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.98 E-value=2.3e-36 Score=351.82 Aligned_cols=159 Identities=16% Similarity=0.219 Sum_probs=92.1
Q ss_pred CCCcEEEecCCcccCCCC-c-ccCCCCCCEEeccCccCCCc----cccccccccccceEEccCCcCCCCCCcccccCCC-
Q 002061 121 SNLKVLNVTGNAMVGSVP-D-LSALKNLEIFDLSINYFTGR----FPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLK- 193 (973)
Q Consensus 121 ~~L~~L~L~~n~l~~~~~-~-l~~l~~L~~L~Ls~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~- 193 (973)
++|++|+|++|+++.... . +..+++|++|+|++|.+++. ++..+..+++|++|++++|.+....+......++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 457777887777755432 2 56677777777777777642 3455566677777777776665332222233344
Q ss_pred ---CCCEEEcccCCCCC----CCChhhhccCCCCeeecccccccCCCchhhhc-----cccccEEEeeccccCCcC----
Q 002061 194 ---NLTYLFLAHCNLRG----RIPESISELRELGTLDICRNKISGEFPRSIRK-----LQKLWKIELYANNLTGEL---- 257 (973)
Q Consensus 194 ---~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~-----l~~L~~L~L~~N~l~~~~---- 257 (973)
+|++|+|++|+++. .++..+..+++|++|+|++|++++..+..+.. .++|++|+|++|++++..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 56666666666663 33556666666666666666665444443332 234666666666655422
Q ss_pred CccccccccccEEEeecccccc
Q 002061 258 PAELGNLTLLQEFDISSNQMYG 279 (973)
Q Consensus 258 ~~~l~~l~~L~~L~Ls~N~l~~ 279 (973)
+..+..+++|++|++++|.+.+
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~ 184 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINE 184 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHH
T ss_pred HHHHhhCCCCCEEECcCCCcch
Confidence 3334445555555555555543
No 299
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.98 E-value=2.1e-35 Score=343.76 Aligned_cols=359 Identities=18% Similarity=0.202 Sum_probs=171.0
Q ss_pred ceEEEeecCCCCCcccccc-ccCCccCcEeeCCCCcccC----cCChhhhCCCCCcEEEecCCcccCCCC-cc-cCCC--
Q 002061 74 RVTEISFDNKSLSGEISSS-ISALQSLTVLSLPFNVLSG----KLPLELSNCSNLKVLNVTGNAMVGSVP-DL-SALK-- 144 (973)
Q Consensus 74 ~v~~l~l~~~~l~~~~~~~-l~~l~~L~~L~Ls~n~l~~----~~p~~l~~l~~L~~L~L~~n~l~~~~~-~l-~~l~-- 144 (973)
+++.|||++++++...... +..+++|++|+|++|++++ .++..+..+++|++|+|++|.+..... .+ ..++
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~ 83 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 83 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhC
Confidence 4566666666666544333 5566666666666666653 245556666666666666666644211 11 2233
Q ss_pred --CCCEEeccCccCCC----ccccccccccccceEEccCCcCCCCCCc---cc-ccCCCCCCEEEcccCCCCCCC----C
Q 002061 145 --NLEIFDLSINYFTG----RFPRWVVNLTQLVSLSIGDNVYDEAEIP---ES-IGNLKNLTYLFLAHCNLRGRI----P 210 (973)
Q Consensus 145 --~L~~L~Ls~n~l~~----~~~~~~~~l~~L~~L~l~~n~l~~~~ip---~~-~~~l~~L~~L~L~~n~l~~~~----~ 210 (973)
+|++|+|++|.+++ .++..+..+++|++|++++|.+....+. .. ....++|++|+|++|++++.. +
T Consensus 84 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 163 (461)
T 1z7x_W 84 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLA 163 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHH
Confidence 46666666666653 3355555556666666665555321110 01 112344555555555555422 3
Q ss_pred hhhhccCCCCeeecccccccCCCchhhhc-----cccccEEEeeccccCCc----CCccccccccccEEEeecccccccc
Q 002061 211 ESISELRELGTLDICRNKISGEFPRSIRK-----LQKLWKIELYANNLTGE----LPAELGNLTLLQEFDISSNQMYGKL 281 (973)
Q Consensus 211 ~~~~~l~~L~~L~L~~N~l~~~~~~~l~~-----l~~L~~L~L~~N~l~~~----~~~~l~~l~~L~~L~Ls~N~l~~~~ 281 (973)
..+..+++|++|+|++|.+++..+..+.. .++|++|+|++|.+++. ++..+..+++|++|++++|.+.+..
T Consensus 164 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~ 243 (461)
T 1z7x_W 164 SVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVG 243 (461)
T ss_dssp HHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHH
T ss_pred HHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHH
Confidence 33444455555555555554333333322 33555555555555432 2333444455555555555444321
Q ss_pred CCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCC----CCccccccccccccccccccccccCChhh
Q 002061 282 PEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGP----FPENLGRYTALTDVDISENQFSGSFPKYL 357 (973)
Q Consensus 282 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~----~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 357 (973)
...+. +..+..+++|+.|++++|.+++. ++..+..+++|++|++++|.+++..+..+
T Consensus 244 ~~~l~-------------------~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l 304 (461)
T 1z7x_W 244 MAELC-------------------PGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLL 304 (461)
T ss_dssp HHHHH-------------------HHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHH
T ss_pred HHHHH-------------------HHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHH
Confidence 10000 11122344555555555555432 34445556666666676666654333322
Q ss_pred hhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccC----CCccccCCCCcceEeccCCcCCCCCCCCCC---
Q 002061 358 CEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGK----IPDGLWALPNVGMLDFGDNDFTGGISPLIG--- 430 (973)
Q Consensus 358 ~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~--- 430 (973)
+... ....++|++|+|++|.+++. ++..+..+++|+.|++++|++++..+..+.
T Consensus 305 ~~~l-------------------~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l 365 (461)
T 1z7x_W 305 CETL-------------------LEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGL 365 (461)
T ss_dssp HHHH-------------------TSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHH
T ss_pred HHHh-------------------ccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHH
Confidence 2110 11224667777777766643 333444444444444444444332211111
Q ss_pred --CCCCCCEEEcccCCCCC----CCChhhhcCCCCCEEEccCCcCC
Q 002061 431 --LSTSLSQLVLQNNRFSG----ELPSELGRLTNLERLILTNNNFS 470 (973)
Q Consensus 431 --~~~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~ 470 (973)
..++|++|+|++|++++ .+|..+..+++|++|+|++|+++
T Consensus 366 ~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 366 GQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp TSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred cCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 13344555555554443 34444444444555555555444
No 300
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.97 E-value=3.9e-33 Score=335.51 Aligned_cols=377 Identities=14% Similarity=0.118 Sum_probs=217.1
Q ss_pred CCCCCCEEeccCccCCCccccccccc--cccceEEccCCc-CCCCCCcccccCCCCCCEEEcccCCCCCC----CChhhh
Q 002061 142 ALKNLEIFDLSINYFTGRFPRWVVNL--TQLVSLSIGDNV-YDEAEIPESIGNLKNLTYLFLAHCNLRGR----IPESIS 214 (973)
Q Consensus 142 ~l~~L~~L~Ls~n~l~~~~~~~~~~l--~~L~~L~l~~n~-l~~~~ip~~~~~l~~L~~L~L~~n~l~~~----~~~~~~ 214 (973)
.+++|++|+|++|.+++..+..+... .+|++|+|+++. +....++..+.++++|++|+|++|.+++. ++..+.
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 44555555555555554444444442 235555555553 22122223334556666666666665544 223345
Q ss_pred ccCCCCeeeccccccc----CCCchhhhccccccEEEeeccccCCcCCccccccccccEEEeeccccc---cccCCccCC
Q 002061 215 ELRELGTLDICRNKIS----GEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMY---GKLPEEIGN 287 (973)
Q Consensus 215 ~l~~L~~L~L~~N~l~----~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~---~~~p~~~~~ 287 (973)
.+++|++|++++|.++ +.++..+.++++|++|+|++|.+.+ ++..+..+++|++|+++.+... +..+..+..
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~ 268 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVF 268 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCC
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhc
Confidence 5566666666666665 2233344556666666666666663 4555666666666666643222 223344555
Q ss_pred CCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCC-ccccccccccccccccccccccCChhhhhhhhHHHH
Q 002061 288 LKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFP-ENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNL 366 (973)
Q Consensus 288 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~l 366 (973)
+++|+.|+++++.. ..+|..+..+++|++|++++|.+++... ..+..+++|++|+++ |.+.+..
T Consensus 269 ~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~------------- 333 (592)
T 3ogk_B 269 PRKLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRG------------- 333 (592)
T ss_dssp CTTCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHH-------------
T ss_pred cccccccCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHH-------------
Confidence 66666666665432 2455556666667777776666543322 234566777777776 4333110
Q ss_pred HhhhccCCCCccccccCccccceEecc-----------ccccccC-CCccccCCCCcceEeccCCcCCCCCCCCCCC-CC
Q 002061 367 LALSNNFSGEVPNSYADCKTIQRLRIS-----------DNHLSGK-IPDGLWALPNVGMLDFGDNDFTGGISPLIGL-ST 433 (973)
Q Consensus 367 l~l~n~~~~~~p~~~~~l~~L~~L~Ls-----------~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-~~ 433 (973)
++..+..+++|++|+|+ .|.+++. ++..+..+++|++|+++.|++++.....+.. ++
T Consensus 334 ----------l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~ 403 (592)
T 3ogk_B 334 ----------LEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLK 403 (592)
T ss_dssp ----------HHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCC
T ss_pred ----------HHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCC
Confidence 11112345667777777 3555432 1222334677777777777776544444433 66
Q ss_pred CCCEEEcc----cCCCCCC-----CChhhhcCCCCCEEEccCC--cCCCCccccccc-cccCCEEEcCCccccc-CCCcc
Q 002061 434 SLSQLVLQ----NNRFSGE-----LPSELGRLTNLERLILTNN--NFSGKIPSALGA-LRQLSSLHLEENALTG-SIPNE 500 (973)
Q Consensus 434 ~L~~L~L~----~N~l~~~-----~p~~~~~l~~L~~L~Ls~N--~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~-~~p~~ 500 (973)
+|+.|+|+ .|++++. ++..+.++++|++|+|++| .+++..+..+.. +++|++|+|++|++++ .++..
T Consensus 404 ~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~ 483 (592)
T 3ogk_B 404 NLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEF 483 (592)
T ss_dssp SCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHH
T ss_pred CCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHH
Confidence 77777775 5667653 2333667788888888643 355444444443 7778888888888765 23445
Q ss_pred ccccccccchhccccccccC-CCccccccCCCCeeecCCCccCCC
Q 002061 501 MGDCARIVDLNLARNSLSGN-IPRSLSLLSSLNALNLSGNKLTGS 544 (973)
Q Consensus 501 ~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~ 544 (973)
+.++++|+.|+|++|.+++. ++..+..+++|+.|+|++|++++.
T Consensus 484 ~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 484 SRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred HhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 56778888888888887644 334445778888888888888754
No 301
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.3e-30 Score=291.72 Aligned_cols=286 Identities=20% Similarity=0.279 Sum_probs=237.9
Q ss_pred CCCCCCCCCCCcceeeeCCCCCceEEEeecCCCCCccccccccCCccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCC
Q 002061 52 SWKESADSPCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGN 131 (973)
Q Consensus 52 ~W~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n 131 (973)
.|... .++|.|.|+ |+- ++++++ .+|..+. ++|++|+|++|.+++..+..|..+++|++|+|++|
T Consensus 22 ~~~~~-~~~C~~~~~-c~~----------~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n 86 (353)
T 2z80_A 22 SSNQA-SLSCDRNGI-CKG----------SSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSN 86 (353)
T ss_dssp ------CCEECTTSE-EEC----------CSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTS
T ss_pred CCCcc-CCCCCCCeE-eeC----------CCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCC
Confidence 34433 356999998 753 455565 4666554 58999999999999766668999999999999999
Q ss_pred cccCCCC-cccCCCCCCEEeccCccCCCccccccccccccceEEccCCcCCCCCCcc--cccCCCCCCEEEcccC-CCCC
Q 002061 132 AMVGSVP-DLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPE--SIGNLKNLTYLFLAHC-NLRG 207 (973)
Q Consensus 132 ~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~--~~~~l~~L~~L~L~~n-~l~~ 207 (973)
++++.++ .++++++|++|+|++|.+++..+..+.++++|++|++++|.+.. +|. .+.++++|++|++++| .+++
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~--l~~~~~~~~l~~L~~L~l~~n~~~~~ 164 (353)
T 2z80_A 87 GINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT--LGETSLFSHLTKLQILRVGNMDTFTK 164 (353)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS--SCSSCSCTTCTTCCEEEEEESSSCCE
T ss_pred ccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc--cCchhhhccCCCCcEEECCCCccccc
Confidence 9998766 49999999999999999997777779999999999999999974 555 7899999999999999 5776
Q ss_pred CCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccccCCcCCccccccccccEEEeeccccccccCCccC-
Q 002061 208 RIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIG- 286 (973)
Q Consensus 208 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~- 286 (973)
..+..+..+++|++|++++|++++..|..+..+++|++|++++|.++...+..+..+++|++|++++|.+++..+..+.
T Consensus 165 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~ 244 (353)
T 2z80_A 165 IQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELST 244 (353)
T ss_dssp ECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC----
T ss_pred cCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccccc
Confidence 7778899999999999999999988899999999999999999999854444456789999999999999976665543
Q ss_pred --CCCCccEEEcccCCCCC----CCCCCcCCcccceeeeccCCccCCCCCccccccccccccccccccccccCC
Q 002061 287 --NLKNLTVFQCFKNNFSG----EFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFP 354 (973)
Q Consensus 287 --~l~~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p 354 (973)
....++.+++.++.+++ .+|..+..+++|+.|++++|+++...+..|..+++|++|+|++|++.+..|
T Consensus 245 ~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 245 GETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp --CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 36778899999999886 467778899999999999999995444457999999999999999996544
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=2e-30 Score=284.04 Aligned_cols=252 Identities=21% Similarity=0.249 Sum_probs=151.1
Q ss_pred CCCCcceeeeCCCCCceEEEeecCCCCCccccccccCCccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCC--
Q 002061 59 SPCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGS-- 136 (973)
Q Consensus 59 ~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~-- 136 (973)
|.|.|.+|.|+.. +++ .+|..+. ++|++|+|++|+++...+..|+++++|++|+|++|.++..
T Consensus 5 C~C~~~~l~c~~~------------~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~ 69 (306)
T 2z66_A 5 CSCSGTEIRCNSK------------GLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGC 69 (306)
T ss_dssp CEEETTEEECCSS------------CCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEE
T ss_pred CeeCCCEEEcCCC------------Ccc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccC
Confidence 5589999999752 222 2343332 5788888888888743334467888888888888877643
Q ss_pred -CCcccCCCCCCEEeccCccCCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccCCCCCCCChhhhc
Q 002061 137 -VPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISE 215 (973)
Q Consensus 137 -~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 215 (973)
+..+..+++|++|+|++|.++ .+|..+..+++|++|++++|.+.....+..+..+++|++|++++|.+++..+..+..
T Consensus 70 ~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 148 (306)
T 2z66_A 70 CSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG 148 (306)
T ss_dssp EEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTT
T ss_pred cccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhccc
Confidence 234556777777777777776 345556666666666666666653322235566666666666666666555555666
Q ss_pred cCCCCeeecccccccC-CCchhhhccccccEEEeeccccCCcCCccccccccccEEEeeccccccccCCccCCCCCccEE
Q 002061 216 LRELGTLDICRNKISG-EFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVF 294 (973)
Q Consensus 216 l~~L~~L~L~~N~l~~-~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 294 (973)
+++|++|+|++|++++ ..|..+..+++|++|+|++|++++..|..+..+++|++|+|++|++++..+..+..+++|+.|
T Consensus 149 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 228 (306)
T 2z66_A 149 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 228 (306)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEE
T ss_pred CcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEe
Confidence 6666666666666654 345555555555555555555555445555555555555555555554444445555555555
Q ss_pred EcccCCCCCCCCCCcCCcc-cceeeeccCCccC
Q 002061 295 QCFKNNFSGEFPSGFGDMR-KLFAFSIYGNRFS 326 (973)
Q Consensus 295 ~l~~N~l~~~~p~~~~~l~-~L~~L~l~~N~l~ 326 (973)
++++|++++..|..+..++ +|+.|++++|+++
T Consensus 229 ~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~ 261 (306)
T 2z66_A 229 DYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 261 (306)
T ss_dssp ECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEE
T ss_pred ECCCCCCcccCHHHHHhhhccCCEEEccCCCee
Confidence 5555555555555555542 4555555555554
No 303
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=2.9e-31 Score=292.75 Aligned_cols=288 Identities=18% Similarity=0.255 Sum_probs=207.0
Q ss_pred HHHHHHH-HHHHhcCCCcccccCCCCCC-CCCCCcceeeeCCCC--CceEEEeecCCCCCccccccc--cCCccCcEeeC
Q 002061 31 VETQALI-QFKSKLKDPHGVLDSWKESA-DSPCGFSGITCDSVT--GRVTEISFDNKSLSGEISSSI--SALQSLTVLSL 104 (973)
Q Consensus 31 ~~~~aLl-~~k~~~~d~~~~~~~W~~~~-~~~c~w~gv~C~~~~--~~v~~l~l~~~~l~~~~~~~l--~~l~~L~~L~L 104 (973)
..+++.. +.|.++.|+..++..|...- .++|.|.++-|.... ..+.. ..+.... .++..+ ...+++++|+|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~--~~g~~~~-~~~~~l~~~~~~~l~~L~L 88 (328)
T 4fcg_A 12 SGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIET--RTGRALK-ATADLLEDATQPGRVALEL 88 (328)
T ss_dssp -----CCCC--CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCC--SHHHHHH-HHHHHHHHHTSTTCCEEEE
T ss_pred ccccceeeeccccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccc--cCCcchh-hhHHHHhcccccceeEEEc
Confidence 3444443 33445678888899997632 357999998884221 11111 0000000 011111 12344555555
Q ss_pred CCCcccCcCChhhhCCCCCcEEEecCCcccCCCCcccCCCCCCEEeccCccCCCccccccccccccceEEccCCcCCCCC
Q 002061 105 PFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAE 184 (973)
Q Consensus 105 s~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 184 (973)
++|.++ .+|..++++++|++|+|++|.++ .+|..+.++++|++|+|++|.+. .
T Consensus 89 ~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~------------------------~lp~~~~~l~~L~~L~Ls~n~l~--~ 141 (328)
T 4fcg_A 89 RSVPLP-QFPDQAFRLSHLQHMTIDAAGLM------------------------ELPDTMQQFAGLETLTLARNPLR--A 141 (328)
T ss_dssp ESSCCS-SCCSCGGGGTTCSEEEEESSCCC------------------------CCCSCGGGGTTCSEEEEESCCCC--C
T ss_pred cCCCch-hcChhhhhCCCCCEEECCCCCcc------------------------chhHHHhccCCCCEEECCCCccc--c
Confidence 555554 44444444555555555555444 44444555555555555555554 4
Q ss_pred CcccccCCCCCCEEEcccCCCCCCCChhhh---------ccCCCCeeecccccccCCCchhhhccccccEEEeeccccCC
Q 002061 185 IPESIGNLKNLTYLFLAHCNLRGRIPESIS---------ELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTG 255 (973)
Q Consensus 185 ip~~~~~l~~L~~L~L~~n~l~~~~~~~~~---------~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 255 (973)
+|..++++++|++|+|++|++.+.+|..+. .+++|++|+|++|+++ .+|..++++++|++|+|++|.+++
T Consensus 142 lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~ 220 (328)
T 4fcg_A 142 LPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA 220 (328)
T ss_dssp CCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC
T ss_pred CcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc
Confidence 567777777777777777777777777665 4999999999999999 889999999999999999999994
Q ss_pred cCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCCccccc
Q 002061 256 ELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGR 335 (973)
Q Consensus 256 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~ 335 (973)
+|..+..+++|++|+|++|.+.+.+|..++.+++|+.|++++|++.+.+|..++.+++|+.|++++|++.+.+|+.++.
T Consensus 221 -l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~ 299 (328)
T 4fcg_A 221 -LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQ 299 (328)
T ss_dssp -CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGG
T ss_pred -CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhh
Confidence 6778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccccc
Q 002061 336 YTALTDVDISENQFS 350 (973)
Q Consensus 336 l~~L~~L~Ls~N~l~ 350 (973)
+++|+.+++..|.+.
T Consensus 300 L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 300 LPANCIILVPPHLQA 314 (328)
T ss_dssp SCTTCEEECCGGGSC
T ss_pred ccCceEEeCCHHHHH
Confidence 999999999988776
No 304
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.97 E-value=3e-33 Score=336.47 Aligned_cols=451 Identities=12% Similarity=0.037 Sum_probs=330.5
Q ss_pred CCCcceeeeCCCCCceEEEeecCCCCCccccccccCCccCcEeeCCCCcc---cCcCChhhh------------CCCCCc
Q 002061 60 PCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVL---SGKLPLELS------------NCSNLK 124 (973)
Q Consensus 60 ~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l---~~~~p~~l~------------~l~~L~ 124 (973)
|++|.++.+.. .+ .+.+.+ ......+..+..+++|++|+|+++.. .+.+|..++ .+++|+
T Consensus 41 ck~W~~~~~~~--~~--~l~~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~ 115 (592)
T 3ogk_B 41 CRRWFKIDSET--RE--HVTMAL-CYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLK 115 (592)
T ss_dssp CHHHHHHHHHH--CC--EEEESC-GGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred hHHHHHhhhcc--cc--EEEEee-ccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCC
Confidence 45899996532 22 222322 23333445667899999999987532 133443332 789999
Q ss_pred EEEecCCcccCCCC-cccCC--CCCCEEeccCcc-CCC-ccccccccccccceEEccCCcCCCCC---CcccccCCCCCC
Q 002061 125 VLNVTGNAMVGSVP-DLSAL--KNLEIFDLSINY-FTG-RFPRWVVNLTQLVSLSIGDNVYDEAE---IPESIGNLKNLT 196 (973)
Q Consensus 125 ~L~L~~n~l~~~~~-~l~~l--~~L~~L~Ls~n~-l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~---ip~~~~~l~~L~ 196 (973)
+|+|++|.+++... .++.. ++|++|+|++|. ++. .++..+..+++|++|+|++|.+.+.. ++..+.++++|+
T Consensus 116 ~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~ 195 (592)
T 3ogk_B 116 SVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLE 195 (592)
T ss_dssp EEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCC
T ss_pred eEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCcc
Confidence 99999998865433 35553 459999999987 321 23344458899999999999886544 445667899999
Q ss_pred EEEcccCCCCCC----CChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccccC---CcCCccccccccccE
Q 002061 197 YLFLAHCNLRGR----IPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLT---GELPAELGNLTLLQE 269 (973)
Q Consensus 197 ~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~---~~~~~~l~~l~~L~~ 269 (973)
+|+|++|.+++. ++..+..+++|++|+|++|.+.+ ++..+..+++|++|+++..... +..+..+..+++|+.
T Consensus 196 ~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~ 274 (592)
T 3ogk_B 196 VLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCR 274 (592)
T ss_dssp EEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCE
T ss_pred EEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccc
Confidence 999999999843 34456788999999999999985 7889999999999999864433 344567788999999
Q ss_pred EEeeccccccccCCccCCCCCccEEEcccCCCCCCCC-CCcCCcccceeeeccCCccCCCCCcccccccccccccccc--
Q 002061 270 FDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFP-SGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISE-- 346 (973)
Q Consensus 270 L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~-- 346 (973)
|+++++... .+|..+..+++|++|++++|.+++... ..+..+++|+.|+++++...+.++..+..+++|++|+|++
T Consensus 275 L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~ 353 (592)
T 3ogk_B 275 LGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGA 353 (592)
T ss_dssp EEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCC
T ss_pred cCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCc
Confidence 999987543 778888899999999999999876444 3468899999999994333333444456789999999993
Q ss_pred ---------ccccccCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCccccC-CCCcceEec
Q 002061 347 ---------NQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWA-LPNVGMLDF 416 (973)
Q Consensus 347 ---------N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~L 416 (973)
|.+++... +.....+++|++|+++.|.+++..+..+.. +++|+.|++
T Consensus 354 ~~~~~~~~~~~~~~~~~-----------------------~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l 410 (592)
T 3ogk_B 354 DEQGMEDEEGLVSQRGL-----------------------IALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRL 410 (592)
T ss_dssp CSSTTSSTTCCCCHHHH-----------------------HHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEE
T ss_pred cccccccccCccCHHHH-----------------------HHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEE
Confidence 56652211 111235789999999999998777777766 899999999
Q ss_pred c----CCcCCCCCC-----CCCCCCCCCCEEEcccC--CCCCCCChhhhc-CCCCCEEEccCCcCCC-CccccccccccC
Q 002061 417 G----DNDFTGGIS-----PLIGLSTSLSQLVLQNN--RFSGELPSELGR-LTNLERLILTNNNFSG-KIPSALGALRQL 483 (973)
Q Consensus 417 ~----~N~l~~~~~-----~~~~~~~~L~~L~L~~N--~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L 483 (973)
+ .|++++.+. ..+..+++|+.|+|+++ .+++..+..+.. +++|++|+|++|++++ .++..+..+++|
T Consensus 411 ~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L 490 (592)
T 3ogk_B 411 VLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNL 490 (592)
T ss_dssp EECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTC
T ss_pred eecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCccc
Confidence 6 778876532 22556899999999853 466555555554 8999999999999985 345667889999
Q ss_pred CEEEcCCcccccC-CCccccccccccchhccccccccCCCccc-cccCCCCeeecCCCc
Q 002061 484 SSLHLEENALTGS-IPNEMGDCARIVDLNLARNSLSGNIPRSL-SLLSSLNALNLSGNK 540 (973)
Q Consensus 484 ~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~L~~N~ 540 (973)
++|+|++|.+++. ++..+..+++|+.|+|++|+++..-...+ ..++.++...+..++
T Consensus 491 ~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~~ 549 (592)
T 3ogk_B 491 QKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSRR 549 (592)
T ss_dssp CEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC-
T ss_pred CeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCcc
Confidence 9999999998754 34455779999999999999986544433 456777766666553
No 305
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=7.4e-30 Score=279.53 Aligned_cols=184 Identities=20% Similarity=0.275 Sum_probs=94.7
Q ss_pred cccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCC-CCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEE
Q 002061 385 KTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGIS-PLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLI 463 (973)
Q Consensus 385 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 463 (973)
++|++|+|++|.++ .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|++.+..+..+..+++|++|+
T Consensus 78 ~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 156 (306)
T 2z66_A 78 TSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 156 (306)
T ss_dssp SCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEE
T ss_pred cccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEE
Confidence 33444444444443 233333444444444444444443332 3344445555555555555544555555555555555
Q ss_pred ccCCcCCC-CccccccccccCCEEEcCCcccccCCCccccccccccchhccccccccCCCccccccCCCCeeecCCCccC
Q 002061 464 LTNNNFSG-KIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLT 542 (973)
Q Consensus 464 Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 542 (973)
|++|.+++ ..|..+..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|+++
T Consensus 157 l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 236 (306)
T 2z66_A 157 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM 236 (306)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCC
T ss_pred CCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCc
Confidence 55555543 34555555555555555555555555555555555555555555555544445555555555555555555
Q ss_pred CCCChhhhcc--cCceEEccCCccccccC
Q 002061 543 GSIPDNLMKL--KLSSIDLSENQLSGSVP 569 (973)
Q Consensus 543 ~~~p~~l~~l--~L~~l~ls~N~l~~~~p 569 (973)
+.+|..+..+ .|+.|+|++|+|+|.++
T Consensus 237 ~~~~~~~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 237 TSKKQELQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp BCSSSSCCCCCTTCCEEECTTCCEECSGG
T ss_pred ccCHHHHHhhhccCCEEEccCCCeecccC
Confidence 5555555544 25556666666655554
No 306
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.3e-29 Score=283.59 Aligned_cols=276 Identities=18% Similarity=0.208 Sum_probs=142.2
Q ss_pred EEeeccccCCcCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCcc
Q 002061 246 IELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRF 325 (973)
Q Consensus 246 L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 325 (973)
.++++|.++ .+|..+. ++|++|++++|++++..+..+.++++|++|++++|++++..|..|+.+++|++|++++|++
T Consensus 36 c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 112 (353)
T 2z80_A 36 CKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYL 112 (353)
T ss_dssp EECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred eeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcC
Confidence 344444444 3333332 2455555555555544444455555555555555555544444555555555555555555
Q ss_pred CCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEecccc-ccccCCCcc
Q 002061 326 SGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDN-HLSGKIPDG 404 (973)
Q Consensus 326 ~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~ 404 (973)
++..+..+..+++|++|++++|++++ +|. ...+.++++|++|++++| .+++..+..
T Consensus 113 ~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~----------------------~~~~~~l~~L~~L~l~~n~~~~~~~~~~ 169 (353)
T 2z80_A 113 SNLSSSWFKPLSSLTFLNLLGNPYKT-LGE----------------------TSLFSHLTKLQILRVGNMDTFTKIQRKD 169 (353)
T ss_dssp SSCCHHHHTTCTTCSEEECTTCCCSS-SCS----------------------SCSCTTCTTCCEEEEEESSSCCEECTTT
T ss_pred CcCCHhHhCCCccCCEEECCCCCCcc-cCc----------------------hhhhccCCCCcEEECCCCccccccCHHH
Confidence 54333334555555555555555541 110 013444555555555555 344444444
Q ss_pred ccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCC
Q 002061 405 LWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLS 484 (973)
Q Consensus 405 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 484 (973)
|..+++|+.|++++|++++..+..+..+++|++|++++|++....+..+..+++|+.|+|++|++++..+..+..
T Consensus 170 ~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~----- 244 (353)
T 2z80_A 170 FAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELST----- 244 (353)
T ss_dssp TTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC---------
T ss_pred ccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccccc-----
Confidence 544444444444444444444444444444444444444444222222333444555555555444332222111
Q ss_pred EEEcCCcccccCCCccccccccccchhcccccccc----CCCccccccCCCCeeecCCCccCCCCChh-hhccc-CceEE
Q 002061 485 SLHLEENALTGSIPNEMGDCARIVDLNLARNSLSG----NIPRSLSLLSSLNALNLSGNKLTGSIPDN-LMKLK-LSSID 558 (973)
Q Consensus 485 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~-L~~l~ 558 (973)
......++.++|++|.+++ .+|..+..+++|+.|+|++|+++ .+|.. +..++ |+.|+
T Consensus 245 ----------------~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~ 307 (353)
T 2z80_A 245 ----------------GETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIW 307 (353)
T ss_dssp ------------------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred ----------------ccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEE
Confidence 0112334444444444443 46777888889999999999998 56655 46665 89999
Q ss_pred ccCCccccccC
Q 002061 559 LSENQLSGSVP 569 (973)
Q Consensus 559 ls~N~l~~~~p 569 (973)
|++|+|.|.+|
T Consensus 308 L~~N~~~~~~~ 318 (353)
T 2z80_A 308 LHTNPWDCSCP 318 (353)
T ss_dssp CCSSCBCCCHH
T ss_pred eeCCCccCcCC
Confidence 99999999888
No 307
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=1.5e-28 Score=283.50 Aligned_cols=233 Identities=21% Similarity=0.200 Sum_probs=166.3
Q ss_pred cceeeeccCCccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEecc
Q 002061 314 KLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRIS 393 (973)
Q Consensus 314 ~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls 393 (973)
+++.|+|++|++++..+..|..+++|++|+|++|+|++. .+..|.++++|++|+|+
T Consensus 65 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i------------------------~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 65 NTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTI------------------------EIGAFNGLANLNTLELF 120 (440)
T ss_dssp TCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEE------------------------CGGGGTTCSSCCEEECC
T ss_pred CCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCcc------------------------ChhhccCCccCCEEECC
Confidence 344444444444444444455555555555555555421 12334555666666666
Q ss_pred ccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEccc-CCCCCCCChhhhcCCCCCEEEccCCcCCCC
Q 002061 394 DNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQN-NRFSGELPSELGRLTNLERLILTNNNFSGK 472 (973)
Q Consensus 394 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 472 (973)
+|+|++..+..|..+++|++|+|++|+++..++..|..+++|++|+|++ |.+....+..|.++++|++|+|++|+++ .
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~ 199 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-E 199 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-S
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-c
Confidence 6666655555666666666777777766666666667777777777777 4455444557788888888888888887 4
Q ss_pred ccccccccccCCEEEcCCcccccCCCccccccccccchhccccccccCCCccccccCCCCeeecCCCccCCCCChhhhcc
Q 002061 473 IPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL 552 (973)
Q Consensus 473 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 552 (973)
+| .+..+++|++|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..+..+
T Consensus 200 ~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 278 (440)
T 3zyj_A 200 IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL 278 (440)
T ss_dssp CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSC
T ss_pred cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccc
Confidence 45 47788888888888888888888888888889999999999888888888889999999999999997777777777
Q ss_pred c-CceEEccCCccccccCccc
Q 002061 553 K-LSSIDLSENQLSGSVPLDF 572 (973)
Q Consensus 553 ~-L~~l~ls~N~l~~~~p~~~ 572 (973)
+ |+.|+|++|+|.|+|...|
T Consensus 279 ~~L~~L~L~~Np~~CdC~l~~ 299 (440)
T 3zyj_A 279 HHLERIHLHHNPWNCNCDILW 299 (440)
T ss_dssp TTCCEEECCSSCEECSSTTHH
T ss_pred cCCCEEEcCCCCccCCCCchH
Confidence 5 8999999999999988653
No 308
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=1.8e-28 Score=283.81 Aligned_cols=252 Identities=19% Similarity=0.178 Sum_probs=161.4
Q ss_pred ccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCCcccccccccccccccc
Q 002061 267 LQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISE 346 (973)
Q Consensus 267 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~ 346 (973)
...++.+++.++ .+|..+. ++|++|++++|+|++..+..|.++++|+.|+|++|++++..+..|
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~------------- 119 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAF------------- 119 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTT-------------
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhc-------------
Confidence 345556655555 4454433 355555555555555555555555555555555555544444444
Q ss_pred ccccccCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCC
Q 002061 347 NQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGIS 426 (973)
Q Consensus 347 N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 426 (973)
.++++|++|+|++|+|++..+..|..+++|++|+|++|+++..++
T Consensus 120 -----------------------------------~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 164 (452)
T 3zyi_A 120 -----------------------------------NGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPS 164 (452)
T ss_dssp -----------------------------------TTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECT
T ss_pred -----------------------------------cCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCH
Confidence 444555555555555554444455555555555555555555555
Q ss_pred CCCCCCCCCCEEEccc-CCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccc
Q 002061 427 PLIGLSTSLSQLVLQN-NRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCA 505 (973)
Q Consensus 427 ~~~~~~~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 505 (973)
..|..+++|+.|+|++ |.+....+..|.++++|++|+|++|++++ +| .+..+++|++|+|++|++++..|..|.+++
T Consensus 165 ~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 242 (452)
T 3zyi_A 165 YAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLS 242 (452)
T ss_dssp TTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCT
T ss_pred hHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCcc
Confidence 5556666666666666 34443444456777777777777777764 33 466777777777777777777777777777
Q ss_pred cccchhccccccccCCCccccccCCCCeeecCCCccCCCCChhhhccc-CceEEccCCccccccCcc
Q 002061 506 RIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLD 571 (973)
Q Consensus 506 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-L~~l~ls~N~l~~~~p~~ 571 (973)
+|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..+..++ |+.|+|++|+|.|.|...
T Consensus 243 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~~ 309 (452)
T 3zyi_A 243 SLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDIL 309 (452)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTTH
T ss_pred CCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCch
Confidence 888888888888777777788888888888888888866666666665 888888888888888764
No 309
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=8e-29 Score=293.65 Aligned_cols=291 Identities=22% Similarity=0.298 Sum_probs=162.4
Q ss_pred CCcccccCCCCCCCCCCCcceeeeC------CCCCceEEEeecCCCCCccccccccCCccCcEeeCCCCcccCcCChhhh
Q 002061 45 DPHGVLDSWKESADSPCGFSGITCD------SVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELS 118 (973)
Q Consensus 45 d~~~~~~~W~~~~~~~c~w~gv~C~------~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~ 118 (973)
|...++++|.... +||.|.|..|. -....++.|++++++++ .+|..+. ++|++|+|++|.|+ .+|.
T Consensus 7 ~~~~~w~~W~~~~-~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~--- 78 (622)
T 3g06_A 7 EYDAVWSAWRRAA-PAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA--- 78 (622)
T ss_dssp ---CHHHHHHHTC-CGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---
T ss_pred HHHHHHHHHHhcC-CcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---
Confidence 4456678897664 47999775431 11234677788877777 6666665 67777777777776 4555
Q ss_pred CCCCCcEEEecCCcccCCCCcccCCCCCCEEeccCccCCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEE
Q 002061 119 NCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYL 198 (973)
Q Consensus 119 ~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L 198 (973)
.+++|++|+|++|++++.+. .+++|++|+|++|.+++. |. .+++|+.|++++|.++. +|.. +++|++|
T Consensus 79 ~l~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~l~~l-~~---~l~~L~~L~L~~N~l~~--lp~~---l~~L~~L 146 (622)
T 3g06_A 79 LPPELRTLEVSGNQLTSLPV---LPPGLLELSIFSNPLTHL-PA---LPSGLCKLWIFGNQLTS--LPVL---PPGLQEL 146 (622)
T ss_dssp CCTTCCEEEECSCCCSCCCC---CCTTCCEEEECSCCCCCC-CC---CCTTCCEEECCSSCCSC--CCCC---CTTCCEE
T ss_pred cCCCCCEEEcCCCcCCcCCC---CCCCCCEEECcCCcCCCC-CC---CCCCcCEEECCCCCCCc--CCCC---CCCCCEE
Confidence 46777777777777766554 566777777777776642 22 34555555555555542 3332 2455555
Q ss_pred EcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccccCCcCCccccccccccEEEeeccccc
Q 002061 199 FLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMY 278 (973)
Q Consensus 199 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~ 278 (973)
+|++|++++ +|. .+++|+.|++++|+|++ +| ..+++|+.|++++|+++
T Consensus 147 ~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---------------------------~~~~~L~~L~Ls~N~l~ 194 (622)
T 3g06_A 147 SVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---------------------------MLPSGLQELSVSDNQLA 194 (622)
T ss_dssp ECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---------------------------CCCTTCCEEECCSSCCS
T ss_pred ECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---------------------------ccCCCCcEEECCCCCCC
Confidence 555555553 222 22344555555555542 23 22344555555555544
Q ss_pred cccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCCccccccccccccccccccccccCChhhh
Q 002061 279 GKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLC 358 (973)
Q Consensus 279 ~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 358 (973)
+ +|.. +++|+.|++++|.++. +|.. +++|+.|++++|.|++ +| ..+++|+.|+|++|+|+ .
T Consensus 195 ~-l~~~---~~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~------ 255 (622)
T 3g06_A 195 S-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-S------ 255 (622)
T ss_dssp C-CCCC---CTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-C------
T ss_pred C-CCCc---cchhhEEECcCCcccc-cCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-c------
Confidence 2 2221 2445555555555542 2221 2455555555555553 33 33455666666666665 1
Q ss_pred hhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCC
Q 002061 359 EKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPL 428 (973)
Q Consensus 359 ~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 428 (973)
+|. .+++|++|+|++|+|+ .+|..|..+++|+.|+|++|.+++..+..
T Consensus 256 ------------------lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~ 303 (622)
T 3g06_A 256 ------------------LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQA 303 (622)
T ss_dssp ------------------CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHH
T ss_pred ------------------CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHH
Confidence 222 2356666777777766 55666666777777777777666554443
No 310
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=1.2e-29 Score=278.23 Aligned_cols=247 Identities=18% Similarity=0.196 Sum_probs=149.1
Q ss_pred cCCccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccC-CCC-ccc-------CCCCCCEEeccCccCCCcccccc
Q 002061 94 SALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVG-SVP-DLS-------ALKNLEIFDLSINYFTGRFPRWV 164 (973)
Q Consensus 94 ~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~-~~~-~l~-------~l~~L~~L~Ls~n~l~~~~~~~~ 164 (973)
+..++|+.|++++|.+ .+|..+... |++|+|++|.+.. ..+ .+. ++++|++|+|++|.+++.+|..+
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred ccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 3344455555555555 444444433 5555555555522 112 122 35555555555555555555544
Q ss_pred --ccccccceEEccCCcCCCCCCcccccCC-----CCCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCC--Cch
Q 002061 165 --VNLTQLVSLSIGDNVYDEAEIPESIGNL-----KNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGE--FPR 235 (973)
Q Consensus 165 --~~l~~L~~L~l~~n~l~~~~ip~~~~~l-----~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~ 235 (973)
..+++|++|++++|.++.. |..++.+ ++|++|+|++|++++..|..|+.+++|++|+|++|++.+. .+.
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~--~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR--DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS--SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHhcCCCccEEEccCCCCcch--hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 5555555555555555432 4445444 6677777777777766666777777777777777776544 233
Q ss_pred hh--hccccccEEEeeccccCCc--CC-ccccccccccEEEeeccccccccC-CccCCCCCccEEEcccCCCCCCCCCCc
Q 002061 236 SI--RKLQKLWKIELYANNLTGE--LP-AELGNLTLLQEFDISSNQMYGKLP-EEIGNLKNLTVFQCFKNNFSGEFPSGF 309 (973)
Q Consensus 236 ~l--~~l~~L~~L~L~~N~l~~~--~~-~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~ 309 (973)
.+ ..+++|++|+|++|++++. ++ ..+..+++|++|+|++|++++..| ..+..+++|++|++++|+|+ .+|..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 33 6677777777777777621 12 233456777777777777776554 34556777777777777777 566655
Q ss_pred CCcccceeeeccCCccCCCCCccccccccccccccccccccc
Q 002061 310 GDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSG 351 (973)
Q Consensus 310 ~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~ 351 (973)
. ++|+.|++++|+|++. |. +..+++|++|+|++|++++
T Consensus 273 ~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp C--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred c--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 5 7777778888877765 54 7777888888888887763
No 311
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=7.2e-28 Score=260.70 Aligned_cols=236 Identities=20% Similarity=0.208 Sum_probs=133.2
Q ss_pred ccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCc-cCCCCCccccccccccccc
Q 002061 265 TLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNR-FSGPFPENLGRYTALTDVD 343 (973)
Q Consensus 265 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~l~~l~~L~~L~ 343 (973)
++|++|++++|.+++..+..+.++++|++|++++|.+++..|..|..+++|++|++++|. ++...|..+..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 345555555555554444445555555555555555554444555555555555555554 4444445555555555555
Q ss_pred cccccccccCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCC
Q 002061 344 ISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTG 423 (973)
Q Consensus 344 Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 423 (973)
+++|++++. .|..+.++++|++|+|++|++++..+..|..+++|+.|++++|++++
T Consensus 112 l~~n~l~~~------------------------~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 167 (285)
T 1ozn_A 112 LDRCGLQEL------------------------GPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISS 167 (285)
T ss_dssp CTTSCCCCC------------------------CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCE
T ss_pred CCCCcCCEE------------------------CHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccc
Confidence 555555421 12334455566666666666665555555566666666666666665
Q ss_pred CCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccc
Q 002061 424 GISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGD 503 (973)
Q Consensus 424 ~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 503 (973)
.++..+..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+++|++|+|++|.+....+. ..-
T Consensus 168 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~-~~~ 246 (285)
T 1ozn_A 168 VPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA-RPL 246 (285)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG-HHH
T ss_pred cCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCc-HHH
Confidence 5555566666677777777777666666677777777777777777765556666777777777777766632221 111
Q ss_pred cccccchhccccccccCCCccc
Q 002061 504 CARIVDLNLARNSLSGNIPRSL 525 (973)
Q Consensus 504 l~~L~~L~Ls~N~l~~~~~~~~ 525 (973)
...++.+..+.|.+....|..+
T Consensus 247 ~~~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 247 WAWLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp HHHHHHCCSEECCCBEEESGGG
T ss_pred HHHHHhcccccCccccCCchHh
Confidence 2334455555555555555544
No 312
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=5.8e-28 Score=261.46 Aligned_cols=162 Identities=25% Similarity=0.285 Sum_probs=77.4
Q ss_pred cCccccceEeccccc-cccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCC
Q 002061 382 ADCKTIQRLRISDNH-LSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLE 460 (973)
Q Consensus 382 ~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 460 (973)
..+++|++|+|++|+ +++..|..|..+++|++|++++|++++..+..+..+++|++|+|++|++++..+..|..+++|+
T Consensus 77 ~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 156 (285)
T 1ozn_A 77 TGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLT 156 (285)
T ss_dssp TTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred CCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCcc
Confidence 334444444444443 4333344444444444444444444444444444444455555555555444444444455555
Q ss_pred EEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhccccccccCCCccccccCCCCeeecCCCc
Q 002061 461 RLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNK 540 (973)
Q Consensus 461 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 540 (973)
+|+|++|++++..+..|..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|+
T Consensus 157 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 236 (285)
T 1ozn_A 157 HLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNP 236 (285)
T ss_dssp EEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSC
T ss_pred EEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCC
Confidence 55555555543333344455555555555555554444555555555555555555554444444555555555555555
Q ss_pred cCC
Q 002061 541 LTG 543 (973)
Q Consensus 541 l~~ 543 (973)
++.
T Consensus 237 ~~c 239 (285)
T 1ozn_A 237 WVC 239 (285)
T ss_dssp EEC
T ss_pred ccC
Confidence 543
No 313
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=1.3e-27 Score=276.70 Aligned_cols=249 Identities=19% Similarity=0.230 Sum_probs=189.4
Q ss_pred cccEEEeeccccCCcCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeecc
Q 002061 242 KLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIY 321 (973)
Q Consensus 242 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 321 (973)
....++.+++.++ .+|..+. ++|++|+|++|++++..|..|.++++|+.|++++|+|++..+..|.++++|+.|+|+
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 4567889999998 6776654 689999999999999889999999999999999999999888999999999999999
Q ss_pred CCccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccc-cccccC
Q 002061 322 GNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISD-NHLSGK 400 (973)
Q Consensus 322 ~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~-N~l~~~ 400 (973)
+|++++..+..|..+++|++|+|++|+|+.. .+..|.++++|++|+|++ |.+...
T Consensus 132 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~------------------------~~~~~~~l~~L~~L~l~~~~~l~~i 187 (452)
T 3zyi_A 132 DNWLTVIPSGAFEYLSKLRELWLRNNPIESI------------------------PSYAFNRVPSLMRLDLGELKKLEYI 187 (452)
T ss_dssp SSCCSBCCTTTSSSCTTCCEEECCSCCCCEE------------------------CTTTTTTCTTCCEEECCCCTTCCEE
T ss_pred CCcCCccChhhhcccCCCCEEECCCCCccee------------------------CHhHHhcCCcccEEeCCCCCCcccc
Confidence 9999876666677777777777777776621 122455566666666666 333322
Q ss_pred CCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCcccccccc
Q 002061 401 IPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGAL 480 (973)
Q Consensus 401 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 480 (973)
....|..+++|++|+|++|++++. | .+..+++|++|+|++|++++..|..|.++
T Consensus 188 ------------------------~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 241 (452)
T 3zyi_A 188 ------------------------SEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGL 241 (452)
T ss_dssp ------------------------CTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTC
T ss_pred ------------------------ChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcccCcccccCc
Confidence 223344555566666666666532 3 36667777777777777777777777777
Q ss_pred ccCCEEEcCCcccccCCCccccccccccchhccccccccCCCccccccCCCCeeecCCCccCC
Q 002061 481 RQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTG 543 (973)
Q Consensus 481 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 543 (973)
++|++|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++..
T Consensus 242 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 242 SSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred cCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 888888888888877777778888888888888888887777777888888888888888874
No 314
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=3.8e-29 Score=274.24 Aligned_cols=205 Identities=15% Similarity=0.135 Sum_probs=132.4
Q ss_pred cCCCCCCEEeccCccCCCccccccccccccceEEccCCcCCCCCCccccc-------CCCCCCEEEcccCCCCCCCChhh
Q 002061 141 SALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIG-------NLKNLTYLFLAHCNLRGRIPESI 213 (973)
Q Consensus 141 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~-------~l~~L~~L~L~~n~l~~~~~~~~ 213 (973)
+..++|+.|++++|.+ .+|..+... |+.|++++|.+....+|..+. ++++|++|+|++|++++.+|..+
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred ccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 3445566666666666 455544443 666677777665556666665 78888888888888888888776
Q ss_pred --hccCCCCeeecccccccCCCchhhhcc-----ccccEEEeeccccCCcCCccccccccccEEEeeccccccc--cCCc
Q 002061 214 --SELRELGTLDICRNKISGEFPRSIRKL-----QKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGK--LPEE 284 (973)
Q Consensus 214 --~~l~~L~~L~L~~N~l~~~~~~~l~~l-----~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~--~p~~ 284 (973)
..+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..|+.+++|++|+|++|++.+. .|..
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 194 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISA 194 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHH
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHH
Confidence 7888888888888888866 7777777 7888888888888877767788888888888888877654 2333
Q ss_pred c--CCCCCccEEEcccCCCCCC--CC-CCcCCcccceeeeccCCccCCCCC-cccccccccccccccccccc
Q 002061 285 I--GNLKNLTVFQCFKNNFSGE--FP-SGFGDMRKLFAFSIYGNRFSGPFP-ENLGRYTALTDVDISENQFS 350 (973)
Q Consensus 285 ~--~~l~~L~~L~l~~N~l~~~--~p-~~~~~l~~L~~L~l~~N~l~~~~~-~~l~~l~~L~~L~Ls~N~l~ 350 (973)
+ ..+++|++|++++|++++. ++ ..+..+++|+.|++++|++++..| ..+..+++|++|+|++|+|+
T Consensus 195 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 266 (312)
T 1wwl_A 195 LCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK 266 (312)
T ss_dssp SCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS
T ss_pred HHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC
Confidence 3 6677777777777776621 11 122344455555555555544332 22333344444444444443
No 315
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=2.6e-27 Score=273.04 Aligned_cols=247 Identities=18% Similarity=0.198 Sum_probs=137.7
Q ss_pred CCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccccCCcCCccccccccccEEEeec
Q 002061 195 LTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISS 274 (973)
Q Consensus 195 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~ 274 (973)
.+.++.++++++ .+|..+. ++++.|+|++|+|++..+..|.++++|++|+|++|.|++..+..|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 344555555555 3443332 3455555555555544444455555555555555555544444455555555555555
Q ss_pred cccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCC-ccCCCCCccccccccccccccccccccccC
Q 002061 275 NQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGN-RFSGPFPENLGRYTALTDVDISENQFSGSF 353 (973)
Q Consensus 275 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N-~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 353 (973)
|++++..+..|..+++|++|++++|+++...+..|..+++|+.|++++| .+....+..
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~--------------------- 180 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGA--------------------- 180 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTT---------------------
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcch---------------------
Confidence 5555433344455555555555555554433334444444444444442 222112223
Q ss_pred ChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCC
Q 002061 354 PKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLST 433 (973)
Q Consensus 354 p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 433 (973)
|.++++|++|+|++|+|+ .+| .+..+++|+.|+|++|++++..+..|..++
T Consensus 181 ---------------------------~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 231 (440)
T 3zyj_A 181 ---------------------------FEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLM 231 (440)
T ss_dssp ---------------------------TTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCT
T ss_pred ---------------------------hhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCc
Confidence 334444455555555444 223 244555555555555555555555566667
Q ss_pred CCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccc
Q 002061 434 SLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALT 494 (973)
Q Consensus 434 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 494 (973)
+|+.|+|++|++++..+..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|.+.
T Consensus 232 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 232 HLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp TCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred cCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 7777777777777777777777888888888888888777777788888888888888776
No 316
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=6.9e-27 Score=277.07 Aligned_cols=267 Identities=27% Similarity=0.401 Sum_probs=151.6
Q ss_pred CCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccccCCcCCccccccccccEEEee
Q 002061 194 NLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDIS 273 (973)
Q Consensus 194 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls 273 (973)
+++.|++++|+++ .+|..+. ++|++|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|. .+++|++|+|+
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECc
Confidence 5777777777777 5555544 56777777777776 3443 3456666666666666 3443 45566666666
Q ss_pred ccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCCccccccccccccccccccccccC
Q 002061 274 SNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSF 353 (973)
Q Consensus 274 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 353 (973)
+|++++ +|. .+++|+.|++++|++++ +|.. +++|++|+|++|++++ +
T Consensus 110 ~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---------------------------l~~L~~L~Ls~N~l~~-l 156 (622)
T 3g06_A 110 SNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---------------------------PPGLQELSVSDNQLAS-L 156 (622)
T ss_dssp SCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---------------------------CTTCCEEECCSSCCSC-C
T ss_pred CCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---------------------------CCCCCEEECcCCcCCC-c
Confidence 666653 232 34455555555555543 2221 1344555555555441 1
Q ss_pred ChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCC
Q 002061 354 PKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLST 433 (973)
Q Consensus 354 p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 433 (973)
| . .+++|+.|++++|.|++ +| ..+++|+.|++++|++++.+. .++
T Consensus 157 ~------------------------~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~l~~----~~~ 201 (622)
T 3g06_A 157 P------------------------A---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLASLPT----LPS 201 (622)
T ss_dssp C------------------------C---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC----CCT
T ss_pred C------------------------C---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCCCCC----ccc
Confidence 1 1 12345556666666553 33 234555555666555554332 235
Q ss_pred CCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhcc
Q 002061 434 SLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLA 513 (973)
Q Consensus 434 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 513 (973)
+|+.|++++|.++ .+|.. +++|+.|+|++|+|++ +| ..+++|++|+|++|+|+. +|. .+++|+.|+|+
T Consensus 202 ~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls 269 (622)
T 3g06_A 202 ELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVY 269 (622)
T ss_dssp TCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECC
T ss_pred hhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCC
Confidence 6666666666666 33332 3567777777777764 34 344666777777777663 333 45566666777
Q ss_pred ccccccCCCccccccCCCCeeecCCCccCCCCChhhhcc
Q 002061 514 RNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL 552 (973)
Q Consensus 514 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 552 (973)
+|+|+ .+|..|.++++|+.|+|++|++++.+|..+..+
T Consensus 270 ~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 270 RNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 307 (622)
T ss_dssp SSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHH
T ss_pred CCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhc
Confidence 77666 556666677777777777777776666655544
No 317
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=1.1e-28 Score=271.18 Aligned_cols=267 Identities=18% Similarity=0.158 Sum_probs=171.3
Q ss_pred CCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccccCCcCCccccccccccEEEeec
Q 002061 195 LTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISS 274 (973)
Q Consensus 195 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~ 274 (973)
++.++++.+.+...+...+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+ +..+++|++|+|++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcC
Confidence 4455666666654444555566678888888888877666777777778888888777775443 77777777777777
Q ss_pred cccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCCccccccccccccccccccccccCC
Q 002061 275 NQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFP 354 (973)
Q Consensus 275 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p 354 (973)
|++++.. ..++|++|++++|++++..+.. +++|+.|++++|++++..+..+..+++
T Consensus 90 n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~---------------- 145 (317)
T 3o53_A 90 NYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSR---------------- 145 (317)
T ss_dssp SEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSS----------------
T ss_pred Ccccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCC----------------
Confidence 7776432 2366777777777766543332 344555555555555444444444444
Q ss_pred hhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCcccc-CCCCcceEeccCCcCCCCCCCCCCCCC
Q 002061 355 KYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLW-ALPNVGMLDFGDNDFTGGISPLIGLST 433 (973)
Q Consensus 355 ~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~~~ 433 (973)
|++|+|++|++++..+..+. .+++|+.|+|++|++++.... ..++
T Consensus 146 --------------------------------L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~--~~l~ 191 (317)
T 3o53_A 146 --------------------------------VQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQ--VVFA 191 (317)
T ss_dssp --------------------------------EEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECC--CCCT
T ss_pred --------------------------------CCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccccc--cccc
Confidence 44444444444443333332 344555555555554443221 2367
Q ss_pred CCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccc-cCCCccccccccccchhc
Q 002061 434 SLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALT-GSIPNEMGDCARIVDLNL 512 (973)
Q Consensus 434 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L 512 (973)
+|++|+|++|++++ +|..+..+++|++|+|++|+++ .+|..+..+++|+.|+|++|+++ +.+|..+..+++|+.|++
T Consensus 192 ~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l 269 (317)
T 3o53_A 192 KLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAK 269 (317)
T ss_dssp TCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHH
T ss_pred cCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEEC
Confidence 78888888888874 4455778888888888888887 56777888888888888888887 667777888888888888
Q ss_pred ccc-ccccCCCc
Q 002061 513 ARN-SLSGNIPR 523 (973)
Q Consensus 513 s~N-~l~~~~~~ 523 (973)
++| .+++..|.
T Consensus 270 ~~~~~l~~~~~~ 281 (317)
T 3o53_A 270 QTVKKLTGQNEE 281 (317)
T ss_dssp HHHHHHHSSSSC
T ss_pred CCchhccCCchh
Confidence 843 56654443
No 318
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=2.7e-28 Score=268.08 Aligned_cols=259 Identities=18% Similarity=0.181 Sum_probs=191.2
Q ss_pred ceEEEeecCCCCCccccccccCCccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCCCCcccCCCCCCEEeccC
Q 002061 74 RVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSI 153 (973)
Q Consensus 74 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~ 153 (973)
+....+++++.+...+......+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++.++ +..+++|++|+|++
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE-ETTCTTCCEEECCS
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh-hhhcCCCCEEECcC
Confidence 34555666777765555556677889999999999987777888899999999999998887665 88888899999998
Q ss_pred ccCCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCC
Q 002061 154 NYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEF 233 (973)
Q Consensus 154 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 233 (973)
|.+++.. ..++|++|++++|.+... + ...+++|++|++++|++++..+..++.+++|++|+|++|++++..
T Consensus 90 n~l~~l~-----~~~~L~~L~l~~n~l~~~--~--~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 90 NYVQELL-----VGPSIETLHAANNNISRV--S--CSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SEEEEEE-----ECTTCCEEECCSSCCSEE--E--ECCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred Ccccccc-----CCCCcCEEECCCCccCCc--C--ccccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 8887432 347888888888877632 2 234677888888888888766777788888888888888887766
Q ss_pred chhhh-ccccccEEEeeccccCCcCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCc
Q 002061 234 PRSIR-KLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDM 312 (973)
Q Consensus 234 ~~~l~-~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l 312 (973)
+..+. .+++|++|+|++|.+++. + ....+++|++|+|++|++++ +|..+..+++|+.|++++|+++ .+|..+..+
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l 236 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFS 236 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCC
T ss_pred HHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcC
Confidence 66653 677888888888888744 3 23347778888888888774 4455777777888888888777 456667777
Q ss_pred ccceeeeccCCccC-CCCCcccccccccccccccc
Q 002061 313 RKLFAFSIYGNRFS-GPFPENLGRYTALTDVDISE 346 (973)
Q Consensus 313 ~~L~~L~l~~N~l~-~~~~~~l~~l~~L~~L~Ls~ 346 (973)
++|+.|++++|++. +..+..+..+++|+.|++++
T Consensus 237 ~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~ 271 (317)
T 3o53_A 237 QNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQT 271 (317)
T ss_dssp TTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHH
T ss_pred CCCCEEEccCCCccCcCHHHHHhccccceEEECCC
Confidence 77777777777776 55666666777777777663
No 319
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=3.9e-30 Score=309.51 Aligned_cols=430 Identities=11% Similarity=0.096 Sum_probs=230.2
Q ss_pred CCCcceeeeCCCCCceEEEeecCCCCCcccc-ccccCCccCcEeeCCCCcccCc---CC------------hhhhCCCCC
Q 002061 60 PCGFSGITCDSVTGRVTEISFDNKSLSGEIS-SSISALQSLTVLSLPFNVLSGK---LP------------LELSNCSNL 123 (973)
Q Consensus 60 ~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~-~~l~~l~~L~~L~Ls~n~l~~~---~p------------~~l~~l~~L 123 (973)
|++|.++.. .....+++.+.. +..+ ..+..+++|++|+|+++..... .| .....+++|
T Consensus 34 ck~W~~~~~----~~~~~l~~~~~~--~~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L 107 (594)
T 2p1m_B 34 CKSWYEIER----WCRRKVFIGNCY--AVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWL 107 (594)
T ss_dssp CHHHHHHHH----HHCCEEEESSTT--SSCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HHHHHHhhh----hhceEEeecccc--ccCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCC
Confidence 457888832 223455554432 2222 3466788899999888753211 11 223567788
Q ss_pred cEEEecCCcccCCCC-ccc-CCCCCCEEeccCc-cCCCc-cccccccccccceEEccCCcCCCCC---CcccccCCCCCC
Q 002061 124 KVLNVTGNAMVGSVP-DLS-ALKNLEIFDLSIN-YFTGR-FPRWVVNLTQLVSLSIGDNVYDEAE---IPESIGNLKNLT 196 (973)
Q Consensus 124 ~~L~L~~n~l~~~~~-~l~-~l~~L~~L~Ls~n-~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~---ip~~~~~l~~L~ 196 (973)
++|+|++|.+++... .+. .+++|++|+|++| .++.. ++..+.++++|++|++++|.+++.. ++.....+++|+
T Consensus 108 ~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~ 187 (594)
T 2p1m_B 108 EEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLV 187 (594)
T ss_dssp CEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCC
T ss_pred CeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCc
Confidence 888888887765433 343 6788888888887 45432 3444457888888888888765433 223334667888
Q ss_pred EEEcccCCCCCCCChhh----hccCCCCeeecccc-cccCCCchhhhccccccEEEeec-------cccCCcCCcccccc
Q 002061 197 YLFLAHCNLRGRIPESI----SELRELGTLDICRN-KISGEFPRSIRKLQKLWKIELYA-------NNLTGELPAELGNL 264 (973)
Q Consensus 197 ~L~L~~n~l~~~~~~~~----~~l~~L~~L~L~~N-~l~~~~~~~l~~l~~L~~L~L~~-------N~l~~~~~~~l~~l 264 (973)
+|++++|. .......+ ..+++|++|+|++| .+++ ++..+..+++|++|+++. |.+.+ ++..+.++
T Consensus 188 ~L~l~~~~-~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~ 264 (594)
T 2p1m_B 188 SLNISCLA-SEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGC 264 (594)
T ss_dssp EEECTTCC-SCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTC
T ss_pred EEEecccC-CcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcC
Confidence 88888876 21212222 34578888888877 4443 677777778888887443 33442 33456677
Q ss_pred ccccEE-EeeccccccccCCccCCCCCccEEEcccCCCCCCCCC-CcCCcccceeeeccCCccCCC-CCccccccccccc
Q 002061 265 TLLQEF-DISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPS-GFGDMRKLFAFSIYGNRFSGP-FPENLGRYTALTD 341 (973)
Q Consensus 265 ~~L~~L-~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~-~~~~l~~l~~L~~ 341 (973)
++|+.| .+..... +.++..+..+++|+.|++++|.+++.... .+..+++|+.|++++| +.+. ++.....+++|++
T Consensus 265 ~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~ 342 (594)
T 2p1m_B 265 KELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRE 342 (594)
T ss_dssp TTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCE
T ss_pred CCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCE
Confidence 777777 3333222 23444444566777777777765532221 2345566666666665 3211 1111223555666
Q ss_pred ccccc---------ccccccCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCcccc-CCCCc
Q 002061 342 VDISE---------NQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLW-ALPNV 411 (973)
Q Consensus 342 L~Ls~---------N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L 411 (973)
|++++ +.+++..... ....+++|++|+++.|.+++..+..+. .+++|
T Consensus 343 L~L~~~~~~g~~~~~~l~~~~l~~-----------------------l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L 399 (594)
T 2p1m_B 343 LRVFPSEPFVMEPNVALTEQGLVS-----------------------VSMGCPKLESVLYFCRQMTNAALITIARNRPNM 399 (594)
T ss_dssp EEEECSCTTCSSCSSCCCHHHHHH-----------------------HHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTC
T ss_pred EEEecCcccccccCCCCCHHHHHH-----------------------HHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCc
Confidence 65532 2222110000 001245566666655555543333332 24445
Q ss_pred ceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCC-----ChhhhcCCCCCEEEccCCcCCCCccccccc-cccCCE
Q 002061 412 GMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGEL-----PSELGRLTNLERLILTNNNFSGKIPSALGA-LRQLSS 485 (973)
Q Consensus 412 ~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~-----p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~ 485 (973)
+.|+++.|...+ -|.+++.. +..+..+++|+.|+|++ .+++..+..+.. +++|+.
T Consensus 400 ~~L~L~~~~~~~------------------~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~ 460 (594)
T 2p1m_B 400 TRFRLCIIEPKA------------------PDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEM 460 (594)
T ss_dssp CEEEEEESSTTC------------------CCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCE
T ss_pred ceeEeecccCCC------------------cccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccE
Confidence 555544110000 03333111 11244556666666655 444333334443 566666
Q ss_pred EEcCCcccccCCCccc-cccccccchhccccccccCCCc-cccccCCCCeeecCCCccC
Q 002061 486 LHLEENALTGSIPNEM-GDCARIVDLNLARNSLSGNIPR-SLSLLSSLNALNLSGNKLT 542 (973)
Q Consensus 486 L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~ 542 (973)
|+|++|.+++..+..+ .++++|+.|+|++|.+++.... .+..+++|+.|+|++|+++
T Consensus 461 L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 461 LSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVS 519 (594)
T ss_dssp EEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCB
T ss_pred eeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCC
Confidence 6666666654333333 4466666666666666433322 2344666777777777664
No 320
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=8.2e-28 Score=279.68 Aligned_cols=233 Identities=20% Similarity=0.197 Sum_probs=142.6
Q ss_pred CccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhh
Q 002061 290 NLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLAL 369 (973)
Q Consensus 290 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l 369 (973)
+|+.|++++|.+++..|..|+.+++|+.|+|++|.+++..| +..+++|++|+|++|.|++.
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l----------------- 95 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQEL----------------- 95 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEE-----------------
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCC-----------------
Confidence 34444444444443333344444444444444444443332 45555555666666655521
Q ss_pred hccCCCCccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCC
Q 002061 370 SNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGEL 449 (973)
Q Consensus 370 ~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~ 449 (973)
| ..++|++|+|++|.|++..+. .+++|+.|+|++|.+++..+..++.+++|+.|+|++|++++..
T Consensus 96 --------~----~~~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (487)
T 3oja_A 96 --------L----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (487)
T ss_dssp --------E----ECTTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEE
T ss_pred --------C----CCCCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcC
Confidence 1 115666666666666654443 2456666666666666666666666777777777777777666
Q ss_pred Chhhh-cCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhccccccccCCCcccccc
Q 002061 450 PSELG-RLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLL 528 (973)
Q Consensus 450 p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 528 (973)
|..+. .+++|+.|+|++|.|++. | .+..+++|++|+|++|+|++.+| .+..+++|+.|+|++|+|++ +|..+..+
T Consensus 161 ~~~l~~~l~~L~~L~Ls~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l 236 (487)
T 3oja_A 161 FAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFS 236 (487)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCC
T ss_pred hHHHhhhCCcccEEecCCCccccc-c-ccccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccC
Confidence 66665 677777777777777754 2 23347777777777777776444 37777777777777777774 56667777
Q ss_pred CCCCeeecCCCccC-CCCChhhhccc-CceEEcc
Q 002061 529 SSLNALNLSGNKLT-GSIPDNLMKLK-LSSIDLS 560 (973)
Q Consensus 529 ~~L~~L~L~~N~l~-~~~p~~l~~l~-L~~l~ls 560 (973)
++|+.|+|++|+++ +.+|..+..++ ++.++++
T Consensus 237 ~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 237 QNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp TTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 77788888888777 55666665554 5555554
No 321
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=6.7e-28 Score=284.06 Aligned_cols=185 Identities=17% Similarity=0.075 Sum_probs=132.0
Q ss_pred cccccCceEEEEEEecCCCcEEEEEeeecc------------ccHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeeEEE
Q 002061 683 LIGSGGTGKVYRLDLKKNAGTVAVKQLWKG------------DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 683 ~lG~G~~g~V~~a~~~~~~~~vavK~~~~~------------~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv 749 (973)
..+.|++|.+.+++....|+.||||++.+. ...++|.+|+++|+++ .|+||++++++++++...|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 467788888888888777999999998652 2345689999999999 799999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccc
Q 002061 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||++|++|.+++... ..++.. +|+.||+.||+|+| ++|||||||||+|||++.+|.+||+|||+|+..
T Consensus 321 MEyv~G~~L~d~i~~~-----~~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~ 389 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAG-----EEIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTT 389 (569)
T ss_dssp EECCCSEEHHHHHHTT-----CCCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred EecCCCCcHHHHHHhC-----CCCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeC
Confidence 9999999999999853 234543 58899999999999 889999999999999999999999999999866
Q ss_pred cCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCC
Q 002061 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPV 881 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf 881 (973)
..... .....+||+.|||||++.+ .+..++|+||+|++++++.++..|+
T Consensus 390 ~~~~~--~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 390 PQDCS--WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp C---C--CSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CCCCc--cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 44322 2334579999999999875 4677899999999988876654443
No 322
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=8.6e-26 Score=242.08 Aligned_cols=215 Identities=23% Similarity=0.274 Sum_probs=140.6
Q ss_pred CCCCcceeeeCCCCCceEEEeecCCCCCccccccccCCccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCCCC
Q 002061 59 SPCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP 138 (973)
Q Consensus 59 ~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~ 138 (973)
++|.|.|+.|.- .+.++.+++++++++ .+|..+. ++|++|+|++|++++..+..|+.+++|++|+|++|.++..++
T Consensus 3 ~~C~~~~~~C~c-~~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~ 78 (270)
T 2o6q_A 3 ALCKKDGGVCSC-NNNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPA 78 (270)
T ss_dssp CCBGGGTCSBEE-ETTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCT
T ss_pred ccCCCCCCCCEe-CCCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeCh
Confidence 579999999964 356778999998888 4666554 578888888888876656678888888888888888877666
Q ss_pred c-ccCCCCCCEEeccCccCCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccCCCCCCCChhhhccC
Q 002061 139 D-LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELR 217 (973)
Q Consensus 139 ~-l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 217 (973)
. +..+++|++|+|++|.+++..+..|..+ ++|++|+|++|++++..+..|..++
T Consensus 79 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-------------------------~~L~~L~l~~n~l~~~~~~~~~~l~ 133 (270)
T 2o6q_A 79 GIFKELKNLETLWVTDNKLQALPIGVFDQL-------------------------VNLAELRLDRNQLKSLPPRVFDSLT 133 (270)
T ss_dssp TTTSSCTTCCEEECCSSCCCCCCTTTTTTC-------------------------SSCCEEECCSSCCCCCCTTTTTTCT
T ss_pred hhhcCCCCCCEEECCCCcCCcCCHhHcccc-------------------------cCCCEEECCCCccCeeCHHHhCcCc
Confidence 5 5777777777777777765444444444 4555555555555544444555555
Q ss_pred CCCeeecccccccCCCchhhhccccccEEEeeccccCCcCCccccccccccEEEeeccccccccCCccCCCCCccEEEcc
Q 002061 218 ELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCF 297 (973)
Q Consensus 218 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 297 (973)
+|++|+|++|+|++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|+++
T Consensus 134 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 213 (270)
T 2o6q_A 134 KLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQ 213 (270)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEec
Confidence 55555555555554444445555556666666665554444455666666666666666665444456666666666666
Q ss_pred cCCCC
Q 002061 298 KNNFS 302 (973)
Q Consensus 298 ~N~l~ 302 (973)
+|.+.
T Consensus 214 ~N~~~ 218 (270)
T 2o6q_A 214 ENPWD 218 (270)
T ss_dssp SSCBC
T ss_pred CCCee
Confidence 66654
No 323
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=4.6e-27 Score=273.34 Aligned_cols=239 Identities=18% Similarity=0.177 Sum_probs=168.6
Q ss_pred ccCCccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCCCCcccCCCCCCEEeccCccCCCccccccccccccce
Q 002061 93 ISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVS 172 (973)
Q Consensus 93 l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 172 (973)
...+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++.++ ++.+++|++|+|++|.+++.. ..++|++
T Consensus 30 ~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~ 103 (487)
T 3oja_A 30 RQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQELL-----VGPSIET 103 (487)
T ss_dssp STTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE-CTTCTTCCEEECCSSEEEEEE-----ECTTCCE
T ss_pred cccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc-cccCCCCCEEEecCCcCCCCC-----CCCCcCE
Confidence 3344588999999998888777888888999999999988887665 888888888888888887533 2377788
Q ss_pred EEccCCcCCCCCCcccccCCCCCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhh-ccccccEEEeecc
Q 002061 173 LSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIR-KLQKLWKIELYAN 251 (973)
Q Consensus 173 L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~-~l~~L~~L~L~~N 251 (973)
|++++|.+... +. ..+++|++|+|++|.+++..|..++.+++|++|+|++|.+++..|..+. .+++|++|+|++|
T Consensus 104 L~L~~N~l~~~--~~--~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N 179 (487)
T 3oja_A 104 LHAANNNISRV--SC--SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYN 179 (487)
T ss_dssp EECCSSCCCCE--EE--CCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTS
T ss_pred EECcCCcCCCC--Cc--cccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCC
Confidence 88888777532 22 3456777777777777777677777777777777777777776666665 6777777777777
Q ss_pred ccCCcCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccC-CCCC
Q 002061 252 NLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFS-GPFP 330 (973)
Q Consensus 252 ~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-~~~~ 330 (973)
.|++. | .+..+++|+.|+|++|.+++ +|..+..+++|+.|++++|.+++ +|..+..+++|+.|++++|.+. +.+|
T Consensus 180 ~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~ 255 (487)
T 3oja_A 180 FIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLR 255 (487)
T ss_dssp CCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHH
T ss_pred ccccc-c-ccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchH
Confidence 77754 2 23357777777777777774 34446677777777777777774 5555666666666666666665 4444
Q ss_pred ccccccccccccccc
Q 002061 331 ENLGRYTALTDVDIS 345 (973)
Q Consensus 331 ~~l~~l~~L~~L~Ls 345 (973)
..+..++.|+.++++
T Consensus 256 ~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 256 DFFSKNQRVQTVAKQ 270 (487)
T ss_dssp HHHTTCHHHHHHHHH
T ss_pred HHHHhCCCCcEEecc
Confidence 555555555555553
No 324
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=2.8e-29 Score=302.03 Aligned_cols=414 Identities=15% Similarity=0.133 Sum_probs=263.9
Q ss_pred cEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccC---CCC-c------------ccCCCCCCEEeccCccCCCccccc
Q 002061 100 TVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVG---SVP-D------------LSALKNLEIFDLSINYFTGRFPRW 163 (973)
Q Consensus 100 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~---~~~-~------------l~~l~~L~~L~Ls~n~l~~~~~~~ 163 (973)
+.+++++.... ..+..+.++++|++|+|+++.... ..+ . ...+++|++|+|++|.+++..+..
T Consensus 46 ~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~ 124 (594)
T 2p1m_B 46 RKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLEL 124 (594)
T ss_dssp CEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHH
T ss_pred eEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHH
Confidence 34555443221 112357788999999999986321 111 1 236788999999999888777777
Q ss_pred cc-cccccceEEccCC-cCCCCCCcccccCCCCCCEEEcccCCCCCCCChhhh----ccCCCCeeeccccc--ccCC-Cc
Q 002061 164 VV-NLTQLVSLSIGDN-VYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESIS----ELRELGTLDICRNK--ISGE-FP 234 (973)
Q Consensus 164 ~~-~l~~L~~L~l~~n-~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~~~~~~----~l~~L~~L~L~~N~--l~~~-~~ 234 (973)
+. .+++|++|++++| .++...++..+.++++|++|+|++|.+++..+..+. .+++|++|++++|. ++.. ++
T Consensus 125 l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~ 204 (594)
T 2p1m_B 125 IAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALE 204 (594)
T ss_dssp HHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHH
T ss_pred HHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHH
Confidence 75 6888888888888 554434555566788888888888888766555554 45688888888886 2211 12
Q ss_pred hhhhccccccEEEeecc-ccCCcCCccccccccccEEEeecc-------ccccccCCccCCCCCccEEE-cccCCCCCCC
Q 002061 235 RSIRKLQKLWKIELYAN-NLTGELPAELGNLTLLQEFDISSN-------QMYGKLPEEIGNLKNLTVFQ-CFKNNFSGEF 305 (973)
Q Consensus 235 ~~l~~l~~L~~L~L~~N-~l~~~~~~~l~~l~~L~~L~Ls~N-------~l~~~~p~~~~~l~~L~~L~-l~~N~l~~~~ 305 (973)
..+..+++|++|+|++| .++ .++..+..+++|++|+++.+ .+.+ ++..+.++++|+.|. +.+..
T Consensus 205 ~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~----- 277 (594)
T 2p1m_B 205 RLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCKELRCLSGFWDAV----- 277 (594)
T ss_dssp HHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTTCCEEECCBTCC-----
T ss_pred HHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCCCcccccCCcccc-----
Confidence 22344578888888877 444 36666777788888875443 3332 233455555565552 22111
Q ss_pred CCCcCCcccceeeeccCCccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCccccccCcc
Q 002061 306 PSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCK 385 (973)
Q Consensus 306 p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~ 385 (973)
. +.++..+..+++|++|+|++|.+++.. ++..+..++
T Consensus 278 -------------------~-~~l~~~~~~~~~L~~L~L~~~~l~~~~-----------------------l~~~~~~~~ 314 (594)
T 2p1m_B 278 -------------------P-AYLPAVYSVCSRLTTLNLSYATVQSYD-----------------------LVKLLCQCP 314 (594)
T ss_dssp -------------------G-GGGGGGHHHHTTCCEEECTTCCCCHHH-----------------------HHHHHTTCT
T ss_pred -------------------h-hhHHHHHHhhCCCCEEEccCCCCCHHH-----------------------HHHHHhcCC
Confidence 1 122333344556666666666644211 011123456
Q ss_pred ccceEeccccccccC-CCccccCCCCcceEecc---------CCcCCCCCCCCC-CCCCCCCEEEcccCCCCCCCChhhh
Q 002061 386 TIQRLRISDNHLSGK-IPDGLWALPNVGMLDFG---------DNDFTGGISPLI-GLSTSLSQLVLQNNRFSGELPSELG 454 (973)
Q Consensus 386 ~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~---------~N~l~~~~~~~~-~~~~~L~~L~L~~N~l~~~~p~~~~ 454 (973)
+|++|++++| +.+. ++.....+++|+.|+++ .|.+++.....+ ..+++|+.|.+..|++++..+..+.
T Consensus 315 ~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~ 393 (594)
T 2p1m_B 315 KLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIA 393 (594)
T ss_dssp TCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHH
T ss_pred CcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHH
Confidence 6666666666 3321 22222235666666663 234433221112 2368899999999999876666665
Q ss_pred -cCCCCCEEEcc--C----CcCCCC-----ccccccccccCCEEEcCCcccccCCCccccc-cccccchhccccccccCC
Q 002061 455 -RLTNLERLILT--N----NNFSGK-----IPSALGALRQLSSLHLEENALTGSIPNEMGD-CARIVDLNLARNSLSGNI 521 (973)
Q Consensus 455 -~l~~L~~L~Ls--~----N~l~~~-----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~ 521 (973)
.+++|+.|+|+ + |.++.. ++..+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..
T Consensus 394 ~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~ 472 (594)
T 2p1m_B 394 RNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLG 472 (594)
T ss_dssp HHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHH
T ss_pred hhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHH
Confidence 58999999999 4 666632 222367789999999988 676655555655 889999999999998765
Q ss_pred Cccc-cccCCCCeeecCCCccCCCCChhh-hccc-CceEEccCCcccc
Q 002061 522 PRSL-SLLSSLNALNLSGNKLTGSIPDNL-MKLK-LSSIDLSENQLSG 566 (973)
Q Consensus 522 ~~~~-~~l~~L~~L~L~~N~l~~~~p~~l-~~l~-L~~l~ls~N~l~~ 566 (973)
+..+ ..+++|+.|+|++|++++..+..+ ..++ |+.|++++|+++.
T Consensus 473 ~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~ 520 (594)
T 2p1m_B 473 MHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSF 520 (594)
T ss_dssp HHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBH
T ss_pred HHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCH
Confidence 5555 679999999999999965444333 3354 9999999999854
No 325
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=2.3e-25 Score=240.85 Aligned_cols=207 Identities=23% Similarity=0.249 Sum_probs=185.8
Q ss_pred ccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCccccCCCCcc
Q 002061 333 LGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVG 412 (973)
Q Consensus 333 l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 412 (973)
+..+++++++++++|.++ . +|..+. +++++|+|++|.|++..+..|..+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~------------------------ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~ 58 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-A------------------------LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLT 58 (290)
T ss_dssp EECSTTCCEEECTTSCCS-S------------------------CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCC
T ss_pred ccccCCccEEECCCCCCC-c------------------------CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCC
Confidence 567788889999999887 3 333332 6899999999999988899999999999
Q ss_pred eEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcc
Q 002061 413 MLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENA 492 (973)
Q Consensus 413 ~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 492 (973)
.|+|++|++++..+. +.+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..|..|..+++|++|+|++|+
T Consensus 59 ~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~ 135 (290)
T 1p9a_G 59 QLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNE 135 (290)
T ss_dssp EEECTTSCCCEEECC--SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSC
T ss_pred EEECCCCccCcccCC--CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCC
Confidence 999999999987654 78899999999999999 788889999999999999999998888999999999999999999
Q ss_pred cccCCCccccccccccchhccccccccCCCccccccCCCCeeecCCCccCCCCChhhhcc-cCceEEccCCccccccCc
Q 002061 493 LTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL-KLSSIDLSENQLSGSVPL 570 (973)
Q Consensus 493 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l-~L~~l~ls~N~l~~~~p~ 570 (973)
|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+... .|+.++|++|+|.|.|..
T Consensus 136 l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c~~ 213 (290)
T 1p9a_G 136 LKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNCEI 213 (290)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSGGG
T ss_pred CCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcCcc
Confidence 99988888999999999999999999777778899999999999999999 677777665 499999999999999864
No 326
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=5.4e-25 Score=235.86 Aligned_cols=206 Identities=21% Similarity=0.277 Sum_probs=186.7
Q ss_pred cccccccccccccccCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCccccCCCCcceEecc
Q 002061 338 ALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFG 417 (973)
Q Consensus 338 ~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 417 (973)
..+.+++++|.++ .+| ..+. ++|++|+|++|+|++..+..|..+++|++|+++
T Consensus 17 ~~~~l~~~~~~l~-~ip------------------------~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 69 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIP------------------------SNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLN 69 (270)
T ss_dssp TTTEEECTTSCCS-SCC------------------------SCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccC------------------------CCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECC
Confidence 4677889988887 333 3332 579999999999998888899999999999999
Q ss_pred CCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCC
Q 002061 418 DNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSI 497 (973)
Q Consensus 418 ~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 497 (973)
+|+++..++..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..
T Consensus 70 ~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 149 (270)
T 2o6q_A 70 DNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLP 149 (270)
T ss_dssp SSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccC
Confidence 99999988888999999999999999999888888999999999999999999888889999999999999999999888
Q ss_pred CccccccccccchhccccccccCCCccccccCCCCeeecCCCccCCCCChhhhccc-CceEEccCCccccccCc
Q 002061 498 PNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPL 570 (973)
Q Consensus 498 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-L~~l~ls~N~l~~~~p~ 570 (973)
+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+..++ |+.|+|++|+|.|.|+.
T Consensus 150 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 223 (270)
T 2o6q_A 150 KGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCNG 223 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSSS
T ss_pred HhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCcc
Confidence 88899999999999999999988888899999999999999999977666777775 99999999999999873
No 327
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=2.2e-25 Score=239.91 Aligned_cols=190 Identities=20% Similarity=0.214 Sum_probs=128.8
Q ss_pred cccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCC
Q 002061 380 SYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNL 459 (973)
Q Consensus 380 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L 459 (973)
.|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|++++|++.+..+..+..+++|
T Consensus 47 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 126 (276)
T 2z62_A 47 SFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTL 126 (276)
T ss_dssp TTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTC
T ss_pred HhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCC
Confidence 34455556666666666655555556666666666666666666655666666667777777777665555566677777
Q ss_pred CEEEccCCcCCCC-ccccccccccCCEEEcCCcccccCCCcccccccccc----chhccccccccCCCccccccCCCCee
Q 002061 460 ERLILTNNNFSGK-IPSALGALRQLSSLHLEENALTGSIPNEMGDCARIV----DLNLARNSLSGNIPRSLSLLSSLNAL 534 (973)
Q Consensus 460 ~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~Ls~N~l~~~~~~~~~~l~~L~~L 534 (973)
++|+|++|++++. +|..|..+++|++|+|++|++++..+..+..+.+|+ .|++++|++++..+..+.. .+|+.|
T Consensus 127 ~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L 205 (276)
T 2z62_A 127 KELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKEL 205 (276)
T ss_dssp CEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEE
T ss_pred CEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEE
Confidence 7777777777653 466777777777777777777766666676666666 6777788777555554443 478888
Q ss_pred ecCCCccCCCCChhhhccc-CceEEccCCccccccCc
Q 002061 535 NLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPL 570 (973)
Q Consensus 535 ~L~~N~l~~~~p~~l~~l~-L~~l~ls~N~l~~~~p~ 570 (973)
+|++|++++..+..+..++ |+.|+|++|+|+|.||.
T Consensus 206 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 242 (276)
T 2z62_A 206 ALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 242 (276)
T ss_dssp ECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTT
T ss_pred ECCCCceeecCHhHhcccccccEEEccCCcccccCCc
Confidence 8888888866555566665 88888888888888873
No 328
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=7.3e-25 Score=235.84 Aligned_cols=209 Identities=21% Similarity=0.217 Sum_probs=171.7
Q ss_pred ccceeeeccCCccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEec
Q 002061 313 RKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRI 392 (973)
Q Consensus 313 ~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~L 392 (973)
++|+.|++++|.+++..+..|..+++|++|++++|++++. .+..|.++++|++|+|
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~------------------------~~~~~~~l~~L~~L~L 83 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTI------------------------EDGAYQSLSHLSTLIL 83 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEE------------------------CTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCcc------------------------CHHHccCCcCCCEEEC
Confidence 3566666666666655555666677777777777776632 2234667778888888
Q ss_pred cccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCC-CChhhhcCCCCCEEEccCCcCCC
Q 002061 393 SDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGE-LPSELGRLTNLERLILTNNNFSG 471 (973)
Q Consensus 393 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~ 471 (973)
++|++++..+..|..+++|++|++++|++++..+..+..+++|++|+|++|++++. +|..+.++++|++|+|++|++++
T Consensus 84 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~ 163 (276)
T 2z62_A 84 TGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163 (276)
T ss_dssp TTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCE
T ss_pred CCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCc
Confidence 88888877778888888888888888888888777788899999999999999864 58999999999999999999998
Q ss_pred CccccccccccCC----EEEcCCcccccCCCccccccccccchhccccccccCCCccccccCCCCeeecCCCccCCCCC
Q 002061 472 KIPSALGALRQLS----SLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIP 546 (973)
Q Consensus 472 ~~p~~~~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 546 (973)
..+..+..+++|+ .|++++|++++..+..+.. .+|+.|+|++|+|++..+..|..+++|+.|+|++|++++..|
T Consensus 164 ~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 164 IYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp ECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred CCHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 8888888888888 8999999999877776655 489999999999998777788999999999999999998765
No 329
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=2.8e-25 Score=238.30 Aligned_cols=227 Identities=19% Similarity=0.205 Sum_probs=178.3
Q ss_pred ccceeeeccCCccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEec
Q 002061 313 RKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRI 392 (973)
Q Consensus 313 ~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~L 392 (973)
.++..+++.++.+.+. ..+..+++|+.|++++|.++. + ..+..+++|++|+|
T Consensus 19 ~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~-------------------------~-~~l~~l~~L~~L~l 70 (272)
T 3rfs_A 19 AETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS-------------------------V-QGIQYLPNVRYLAL 70 (272)
T ss_dssp HHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC-------------------------C-TTGGGCTTCCEEEC
T ss_pred HHHHHHHhcCcccccc--cccccccceeeeeeCCCCccc-------------------------c-cccccCCCCcEEEC
Confidence 3444455555555432 335566777777777777651 1 23556778888888
Q ss_pred cccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCC
Q 002061 393 SDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGK 472 (973)
Q Consensus 393 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 472 (973)
++|.+++. ..+..+++|++|++++|++++.++..+..+++|++|+|++|++++..+..|..+++|++|+|++|++++.
T Consensus 71 ~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 148 (272)
T 3rfs_A 71 GGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSL 148 (272)
T ss_dssp TTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCcc
Confidence 88888752 3677788888888888888887777788888888889988888877777788889999999999999877
Q ss_pred ccccccccccCCEEEcCCcccccCCCccccccccccchhccccccccCCCccccccCCCCeeecCCCccCCCCChhhhcc
Q 002061 473 IPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL 552 (973)
Q Consensus 473 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 552 (973)
.+..|..+++|++|+|++|++++..+..|+.+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..|.
T Consensus 149 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~----- 223 (272)
T 3rfs_A 149 PKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG----- 223 (272)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT-----
T ss_pred CHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCcH-----
Confidence 777788899999999999999888888888899999999999999988888888999999999999999877663
Q ss_pred cCceEEccCCccccccCcccccC
Q 002061 553 KLSSIDLSENQLSGSVPLDFLRM 575 (973)
Q Consensus 553 ~L~~l~ls~N~l~~~~p~~~~~~ 575 (973)
++.++++.|.++|.+|..+...
T Consensus 224 -l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 224 -IRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp -THHHHHHHHHTGGGBBCTTSCB
T ss_pred -HHHHHHHHHhCCCcccCccccc
Confidence 6778889999999999765443
No 330
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=1.5e-24 Score=232.57 Aligned_cols=226 Identities=18% Similarity=0.194 Sum_probs=138.8
Q ss_pred CccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCCCCcccCCCCCCEEeccCccCCCccccccccccccceEEc
Q 002061 96 LQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSI 175 (973)
Q Consensus 96 l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l 175 (973)
+..+..+++..+.+.+. ..+..+++|+.|++++|.+... +.++.+++|++|++++|.+++.
T Consensus 18 ~~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~~-~~l~~l~~L~~L~l~~n~l~~~---------------- 78 (272)
T 3rfs_A 18 FAETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKSV-QGIQYLPNVRYLALGGNKLHDI---------------- 78 (272)
T ss_dssp HHHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCCC-TTGGGCTTCCEEECTTSCCCCC----------------
T ss_pred HHHHHHHHhcCcccccc--cccccccceeeeeeCCCCcccc-cccccCCCCcEEECCCCCCCCc----------------
Confidence 34455556666665543 2355666677777777666542 3456666666666666666531
Q ss_pred cCCcCCCCCCcccccCCCCCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccccCC
Q 002061 176 GDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTG 255 (973)
Q Consensus 176 ~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 255 (973)
+.++.+++|++|+|++|++++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++|++++
T Consensus 79 -----------~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 147 (272)
T 3rfs_A 79 -----------SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQS 147 (272)
T ss_dssp -----------GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred -----------hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCc
Confidence 244555556666666666665555555666666666666666665555555666666666666666665
Q ss_pred cCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCCccccc
Q 002061 256 ELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGR 335 (973)
Q Consensus 256 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~ 335 (973)
..+..+..+++|++|++++|++++..+..+..+++|+.|++++|++++..+..+..+++|+.|++++|.+.+.
T Consensus 148 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~------- 220 (272)
T 3rfs_A 148 LPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT------- 220 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------
T ss_pred cCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------
Confidence 5555566666666666666666655555566666666777766666666666666677777777777766543
Q ss_pred cccccccccccccccccCChhhh
Q 002061 336 YTALTDVDISENQFSGSFPKYLC 358 (973)
Q Consensus 336 l~~L~~L~Ls~N~l~~~~p~~~~ 358 (973)
+++|+.|+++.|.++|.+|.+++
T Consensus 221 ~~~l~~l~~~~n~~~g~ip~~~~ 243 (272)
T 3rfs_A 221 CPGIRYLSEWINKHSGVVRNSAG 243 (272)
T ss_dssp TTTTHHHHHHHHHTGGGBBCTTS
T ss_pred CcHHHHHHHHHHhCCCcccCccc
Confidence 34567777777777766665543
No 331
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=8e-26 Score=251.04 Aligned_cols=234 Identities=15% Similarity=0.223 Sum_probs=151.0
Q ss_pred CCCcceeeeCCCCCceEEEeecCCCCCccccccccCC--ccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCC-
Q 002061 60 PCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISAL--QSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGS- 136 (973)
Q Consensus 60 ~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l--~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~- 136 (973)
|..|.++.|+. ..++.++++++.+. +..+..+ ++++.|++++|.+++..+. +..+++|++|+|++|.+++.
T Consensus 36 c~~W~~~~~~~--~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~ 109 (336)
T 2ast_B 36 CKRWYRLASDE--SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVST 109 (336)
T ss_dssp CHHHHHHHTCS--TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHH
T ss_pred HHHHHHHhcCc--hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHH
Confidence 46899999873 45778888887776 4456666 7788888888887765554 55677788888877777542
Q ss_pred -CCcccCCCCCCEEeccCccCCCccccccccccccceEEccCC-cCCCCCCcccccCCCCCCEEEcccC-CCCCC-CChh
Q 002061 137 -VPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDN-VYDEAEIPESIGNLKNLTYLFLAHC-NLRGR-IPES 212 (973)
Q Consensus 137 -~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n-~l~~~~ip~~~~~l~~L~~L~L~~n-~l~~~-~~~~ 212 (973)
+..+..+++|++|+|++|.+++..+..+..+++|++|++++| .++...++..+.++++|++|++++| .+++. ++..
T Consensus 110 ~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~ 189 (336)
T 2ast_B 110 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVA 189 (336)
T ss_dssp HHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHH
T ss_pred HHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHH
Confidence 334677777777777777777666777777777777777777 4544345555666777777777777 66643 4555
Q ss_pred hhccC-CCCeeecccc--ccc-CCCchhhhccccccEEEeeccc-cCCcCCccccccccccEEEeeccc-cccccCCccC
Q 002061 213 ISELR-ELGTLDICRN--KIS-GEFPRSIRKLQKLWKIELYANN-LTGELPAELGNLTLLQEFDISSNQ-MYGKLPEEIG 286 (973)
Q Consensus 213 ~~~l~-~L~~L~L~~N--~l~-~~~~~~l~~l~~L~~L~L~~N~-l~~~~~~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~ 286 (973)
+..++ +|++|+|++| .++ +.++..+..+++|++|++++|. +++..+..+..+++|++|++++|. +.......+.
T Consensus 190 ~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~ 269 (336)
T 2ast_B 190 VAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELG 269 (336)
T ss_dssp HHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGG
T ss_pred HHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHh
Confidence 66666 6777777666 343 3445555666666666666666 555555566666666666666663 2211112345
Q ss_pred CCCCccEEEcccC
Q 002061 287 NLKNLTVFQCFKN 299 (973)
Q Consensus 287 ~l~~L~~L~l~~N 299 (973)
++++|+.|++++|
T Consensus 270 ~~~~L~~L~l~~~ 282 (336)
T 2ast_B 270 EIPTLKTLQVFGI 282 (336)
T ss_dssp GCTTCCEEECTTS
T ss_pred cCCCCCEEeccCc
Confidence 5555555555555
No 332
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=7.3e-25 Score=256.81 Aligned_cols=184 Identities=20% Similarity=0.202 Sum_probs=144.2
Q ss_pred cccCcccccCceEEEEEEecCCCcEEEEEeeecc----------ccHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeeEE
Q 002061 679 EEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----------DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 679 ~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----------~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
...+.||+|+||+||+|... ++.+|+|+.... ...+++.+|++++++++||||+++..++..++..|+
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l 416 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSYL--DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI 416 (540)
T ss_dssp ---------CCEEEEEEECS--SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred CCCCEEeeCCCEEEEEEEEC--CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence 44678999999999999544 778999975431 113457899999999999999966666667778899
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCccc
Q 002061 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++.. +..++.|+++||+||| +++|+||||||+||+++. .+||+|||+++.
T Consensus 417 VmE~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~ 478 (540)
T 3en9_A 417 MMSYINGKLAKDVIED-------------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKI 478 (540)
T ss_dssp EEECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEE
T ss_pred EEECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEE
Confidence 9999999999998863 3578999999999999 789999999999999999 999999999987
Q ss_pred ccCCCCcc-----cccccCCcccccccccccc--CCCCccchHHHHHHHHHHHHhCCCCCC
Q 002061 829 AENSPKVS-----DYSCFAGTHGYIAPELAYT--CKVSEKSDVFSFGVVLLELVTGRKPVE 882 (973)
Q Consensus 829 ~~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~~l~el~tg~~pf~ 882 (973)
........ ......||+.|+|||++.. ..|+..+|+|+..+-..+-+.++.+|.
T Consensus 479 ~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 479 SNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 75432111 1124578999999999976 568888999999999888888877764
No 333
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=6.8e-25 Score=245.82 Aligned_cols=260 Identities=16% Similarity=0.174 Sum_probs=135.2
Q ss_pred EeecCCCCCccccccccCCccCcEeeCCCCcccCcCC----hhhhCCC-CCcEEEecCCcccCCCC-cccCC-----CCC
Q 002061 78 ISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLP----LELSNCS-NLKVLNVTGNAMVGSVP-DLSAL-----KNL 146 (973)
Q Consensus 78 l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p----~~l~~l~-~L~~L~L~~n~l~~~~~-~l~~l-----~~L 146 (973)
.+++.++++|.+|..+...++|++|+|++|.+++..+ ..|..++ +|++|+|++|.+.+..+ .+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4566667776666666666667777777777665544 5566666 67777777776665433 24333 666
Q ss_pred CEEeccCccCCCccccccccc-----cccceEEccCCcCCCCCCccc----ccC-CCCCCEEEcccCCCCCCCChh----
Q 002061 147 EIFDLSINYFTGRFPRWVVNL-----TQLVSLSIGDNVYDEAEIPES----IGN-LKNLTYLFLAHCNLRGRIPES---- 212 (973)
Q Consensus 147 ~~L~Ls~n~l~~~~~~~~~~l-----~~L~~L~l~~n~l~~~~ip~~----~~~-l~~L~~L~L~~n~l~~~~~~~---- 212 (973)
++|+|++|.+++..+..+... ++|++|++++|.++... +.. +.. .++|++|+|++|++++..+..
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~-~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKS-SSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSC-HHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHH-HHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 666666666665555433332 55555555555554322 111 222 135555555555555322222
Q ss_pred hhccC-CCCeeecccccccCCCchhhhccccccEEEeeccccCCcCCcccccc-ccccEEEeeccccccc----cCCccC
Q 002061 213 ISELR-ELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNL-TLLQEFDISSNQMYGK----LPEEIG 286 (973)
Q Consensus 213 ~~~l~-~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l-~~L~~L~Ls~N~l~~~----~p~~~~ 286 (973)
+..++ +|++|+|++|+|++..+..+... +..+ ++|++|+|++|.+++. ++..+.
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~--------------------l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~ 221 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKF--------------------LASIPASVTSLDLSANLLGLKSYAELAYIFS 221 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHH--------------------HHTSCTTCCEEECTTSCGGGSCHHHHHHHHH
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHH--------------------HHhCCCCCCEEECCCCCCChhHHHHHHHHHh
Confidence 22332 45555555555544444333322 1112 3444444444444431 222222
Q ss_pred C-CCCccEEEcccCCCCCCCC----CCcCCcccceeeeccCCccCCCC-------CccccccccccccccccccccccCC
Q 002061 287 N-LKNLTVFQCFKNNFSGEFP----SGFGDMRKLFAFSIYGNRFSGPF-------PENLGRYTALTDVDISENQFSGSFP 354 (973)
Q Consensus 287 ~-l~~L~~L~l~~N~l~~~~p----~~~~~l~~L~~L~l~~N~l~~~~-------~~~l~~l~~L~~L~Ls~N~l~~~~p 354 (973)
. .++|+.|++++|.+++..+ ..+..+++|+.|++++|.+.+.. +..+..+++|+.||+++|++.+..+
T Consensus 222 ~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 222 SIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred cCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 2 2345555555555544322 22344555666666666543322 2356677788888888888886655
Q ss_pred hhhh
Q 002061 355 KYLC 358 (973)
Q Consensus 355 ~~~~ 358 (973)
..+.
T Consensus 302 ~~~~ 305 (362)
T 3goz_A 302 IPIS 305 (362)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 334
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=2.7e-23 Score=224.53 Aligned_cols=201 Identities=23% Similarity=0.260 Sum_probs=103.3
Q ss_pred hhCCCCCcEEEecCCcccCCCCcccCCCCCCEEeccCccCCCccccccccccccceEEccCCcCCCCCCcccccCCCCCC
Q 002061 117 LSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLT 196 (973)
Q Consensus 117 l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~ 196 (973)
++++++|+.+++++|.++..|+.+. +++++|+|++|.+++..+..|..+++|++|++++|.++. ++.. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~-~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK--LQVD-GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCSSCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE--EECC-SCCTTCC
T ss_pred ccccCCccEEECCCCCCCcCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc--ccCC-CCCCcCC
Confidence 4455555555555555555554443 456666666666665555555555555555555555542 2222 4555666
Q ss_pred EEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccccCCcCCccccccccccEEEeeccc
Q 002061 197 YLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQ 276 (973)
Q Consensus 197 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~ 276 (973)
+|+|++|+++ .+|..+..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 6666666665 445555555555555555555554444445555555555555555554444444555555555555555
Q ss_pred cccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCc
Q 002061 277 MYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNR 324 (973)
Q Consensus 277 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 324 (973)
+++..+..+..+++|+.|++++|+++ .+|..+..+.+|+.|++++|.
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np 206 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNP 206 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCC
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCC
Confidence 55333333444455555555555444 333333333333333333333
No 335
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=4.7e-23 Score=218.18 Aligned_cols=158 Identities=25% Similarity=0.254 Sum_probs=75.8
Q ss_pred CcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcC
Q 002061 410 NVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLE 489 (973)
Q Consensus 410 ~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 489 (973)
+++.|+|++|++++..+..|..+++|++|+|++|+|++..|..|..+++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 44444444444444444444444444444444444444444444444445555555554444444444444555555555
Q ss_pred CcccccCCCccccccccccchhccccccccCCCccccccCCCCeeecCCCccCCCCChhhhccc-CceEEccCCccccc
Q 002061 490 ENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGS 567 (973)
Q Consensus 490 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-L~~l~ls~N~l~~~ 567 (973)
+|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..|..+..++ |+.|+|++|+|+|.
T Consensus 116 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 116 GNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 5555444444444445555555555555444444444555555555555555544444444443 55555555555544
No 336
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=7.6e-23 Score=216.54 Aligned_cols=178 Identities=20% Similarity=0.247 Sum_probs=164.3
Q ss_pred HhhhccCCCCccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCC
Q 002061 367 LALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFS 446 (973)
Q Consensus 367 l~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~ 446 (973)
+..+++-...+|..+. +++++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+++
T Consensus 19 l~~~~~~l~~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 96 (251)
T 3m19_A 19 VDCQGKSLDSVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA 96 (251)
T ss_dssp EECTTCCCSSCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCC
T ss_pred EecCCCCccccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCccc
Confidence 3445666677887766 68999999999999998999999999999999999999999999999999999999999999
Q ss_pred CCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhccccccccCCCcccc
Q 002061 447 GELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLS 526 (973)
Q Consensus 447 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 526 (973)
+..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|+.+++|+.|+|++|+|++..+..|.
T Consensus 97 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 176 (251)
T 3m19_A 97 SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFD 176 (251)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred ccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHh
Confidence 88888999999999999999999988888899999999999999999988888999999999999999999988888999
Q ss_pred ccCCCCeeecCCCccCCCCC
Q 002061 527 LLSSLNALNLSGNKLTGSIP 546 (973)
Q Consensus 527 ~l~~L~~L~L~~N~l~~~~p 546 (973)
.+++|+.|+|++|++++...
T Consensus 177 ~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 177 RLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp TCTTCCEEECCSCCBCTTST
T ss_pred CCCCCCEEEeeCCceeCCcc
Confidence 99999999999999997633
No 337
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=2.5e-24 Score=238.98 Aligned_cols=252 Identities=15% Similarity=0.182 Sum_probs=214.9
Q ss_pred cCcEeeCCCCcccCcCChhhhCC--CCCcEEEecCCcccCCCCcccCCCCCCEEeccCccCCCc-cccccccccccceEE
Q 002061 98 SLTVLSLPFNVLSGKLPLELSNC--SNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGR-FPRWVVNLTQLVSLS 174 (973)
Q Consensus 98 ~L~~L~Ls~n~l~~~~p~~l~~l--~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~ 174 (973)
.++.|++++|.+. |..+..+ ++++.|++++|.+.+.++.+..+++|++|+|++|.+++. ++..+..+++|++|+
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 4789999999887 5678888 999999999999999988888999999999999999876 888999999999999
Q ss_pred ccCCcCCCCCCcccccCCCCCCEEEcccC-CCCCC-CChhhhccCCCCeeecccc-cccCC-Cchhhhccc-cccEEEee
Q 002061 175 IGDNVYDEAEIPESIGNLKNLTYLFLAHC-NLRGR-IPESISELRELGTLDICRN-KISGE-FPRSIRKLQ-KLWKIELY 249 (973)
Q Consensus 175 l~~n~l~~~~ip~~~~~l~~L~~L~L~~n-~l~~~-~~~~~~~l~~L~~L~L~~N-~l~~~-~~~~l~~l~-~L~~L~L~ 249 (973)
+++|.++. ..|..++.+++|++|+|++| .+++. ++..+..+++|++|+|++| .+++. ++..+..++ +|++|+|+
T Consensus 125 L~~~~l~~-~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 125 LEGLRLSD-PIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp CTTCBCCH-HHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred CcCcccCH-HHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 99998764 35778899999999999999 67753 6777899999999999999 99865 677889999 99999999
Q ss_pred cc--ccC-CcCCccccccccccEEEeeccc-cccccCCccCCCCCccEEEcccCC-CCCCCCCCcCCcccceeeeccCCc
Q 002061 250 AN--NLT-GELPAELGNLTLLQEFDISSNQ-MYGKLPEEIGNLKNLTVFQCFKNN-FSGEFPSGFGDMRKLFAFSIYGNR 324 (973)
Q Consensus 250 ~N--~l~-~~~~~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l~~L~~L~l~~N~ 324 (973)
+| .++ +.++..+..+++|++|++++|. +++..+..+.++++|+.|++++|. +.......++.+++|+.|++++|
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~- 282 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI- 282 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-
Confidence 99 555 4567778899999999999999 777888899999999999999995 43333336888999999999999
Q ss_pred cCCCCCcccccc-ccccccccccccccccCChhh
Q 002061 325 FSGPFPENLGRY-TALTDVDISENQFSGSFPKYL 357 (973)
Q Consensus 325 l~~~~~~~l~~l-~~L~~L~Ls~N~l~~~~p~~~ 357 (973)
++ .+.+..+ .+|+.|++++|++++..|..+
T Consensus 283 i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~ 313 (336)
T 2ast_B 283 VP---DGTLQLLKEALPHLQINCSHFTTIARPTI 313 (336)
T ss_dssp SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSC
T ss_pred cC---HHHHHHHHhhCcceEEecccCccccCCcc
Confidence 43 3345555 358889999999998777654
No 338
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=2.9e-24 Score=240.61 Aligned_cols=232 Identities=19% Similarity=0.218 Sum_probs=183.5
Q ss_pred CceEEEeecCCCCCcccc----ccccCCc-cCcEeeCCCCcccCcCChhhhCC-----CCCcEEEecCCcccCCCCc---
Q 002061 73 GRVTEISFDNKSLSGEIS----SSISALQ-SLTVLSLPFNVLSGKLPLELSNC-----SNLKVLNVTGNAMVGSVPD--- 139 (973)
Q Consensus 73 ~~v~~l~l~~~~l~~~~~----~~l~~l~-~L~~L~Ls~n~l~~~~p~~l~~l-----~~L~~L~L~~n~l~~~~~~--- 139 (973)
..++.|+|+++.+++..+ ..+..++ +|++|+|++|.+++..+..+..+ ++|++|+|++|.+++..+.
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 459999999999998777 7788898 99999999999998888888776 9999999999999877654
Q ss_pred --ccCC-CCCCEEeccCccCCCcccccccc-----ccccceEEccCCcCCCCC---CcccccCCC-CCCEEEcccCCCCC
Q 002061 140 --LSAL-KNLEIFDLSINYFTGRFPRWVVN-----LTQLVSLSIGDNVYDEAE---IPESIGNLK-NLTYLFLAHCNLRG 207 (973)
Q Consensus 140 --l~~l-~~L~~L~Ls~n~l~~~~~~~~~~-----l~~L~~L~l~~n~l~~~~---ip~~~~~l~-~L~~L~L~~n~l~~ 207 (973)
+..+ ++|++|+|++|.+++..+..+.. .++|++|+|++|.++... ++..+..++ +|++|+|++|++++
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~ 181 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLAS 181 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCch
Confidence 4555 89999999999999877766554 369999999999997533 334456665 99999999999998
Q ss_pred CCChhhhcc-----CCCCeeecccccccCC----Cchhhhcc-ccccEEEeeccccCCcCC----ccccccccccEEEee
Q 002061 208 RIPESISEL-----RELGTLDICRNKISGE----FPRSIRKL-QKLWKIELYANNLTGELP----AELGNLTLLQEFDIS 273 (973)
Q Consensus 208 ~~~~~~~~l-----~~L~~L~L~~N~l~~~----~~~~l~~l-~~L~~L~L~~N~l~~~~~----~~l~~l~~L~~L~Ls 273 (973)
..+..+... ++|++|+|++|+|++. ++..+..+ ++|++|+|++|.+++..+ ..+..+++|+.|+|+
T Consensus 182 ~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~ 261 (362)
T 3goz_A 182 KNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLD 261 (362)
T ss_dssp SCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEE
T ss_pred hhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEec
Confidence 777655544 6999999999999864 45566664 589999999999986554 335677889999999
Q ss_pred ccccccc-------cCCccCCCCCccEEEcccCCCCCC
Q 002061 274 SNQMYGK-------LPEEIGNLKNLTVFQCFKNNFSGE 304 (973)
Q Consensus 274 ~N~l~~~-------~p~~~~~l~~L~~L~l~~N~l~~~ 304 (973)
+|.+.+. ++..+.++++|+.|++++|++.+.
T Consensus 262 ~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 262 YDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred cCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 9985432 233455566666666666666544
No 339
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=1.2e-22 Score=213.48 Aligned_cols=195 Identities=14% Similarity=0.108 Sum_probs=112.3
Q ss_pred cCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCc-ccCCCC-cccCCCCCCEEeccC-ccCCCccccccccccccceEE
Q 002061 98 SLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNA-MVGSVP-DLSALKNLEIFDLSI-NYFTGRFPRWVVNLTQLVSLS 174 (973)
Q Consensus 98 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~-l~~~~~-~l~~l~~L~~L~Ls~-n~l~~~~~~~~~~l~~L~~L~ 174 (973)
+|++|+|++|++++..+..|+.+++|++|+|++|+ +++.++ .|+++++|++|++++ |.+++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 78888888888886656678888888888888886 766665 477778888888877 777755555555555555555
Q ss_pred ccCCcCCCCCCcccccCCCCCC---EEEcccC-CCCCCCChhhhccCCCCeeecccccccCCCchhhhcccccc-EEEee
Q 002061 175 IGDNVYDEAEIPESIGNLKNLT---YLFLAHC-NLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLW-KIELY 249 (973)
Q Consensus 175 l~~n~l~~~~ip~~~~~l~~L~---~L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~-~L~L~ 249 (973)
+++|.++. +|. ++.+++|+ +|++++| ++++..+..|.. +++|+ +|+++
T Consensus 112 l~~n~l~~--lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~------------------------l~~L~~~L~l~ 164 (239)
T 2xwt_C 112 IFNTGLKM--FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQG------------------------LCNETLTLKLY 164 (239)
T ss_dssp EEEECCCS--CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTT------------------------TBSSEEEEECC
T ss_pred CCCCCCcc--ccc-cccccccccccEEECCCCcchhhcCcccccc------------------------hhcceeEEEcC
Confidence 55555542 333 44444444 5555555 444433344444 44444 55555
Q ss_pred ccccCCcCCccccccccccEEEeeccc-cccccCCccCCC-CCccEEEcccCCCCCCCCCCcCCcccceeeeccCC
Q 002061 250 ANNLTGELPAELGNLTLLQEFDISSNQ-MYGKLPEEIGNL-KNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGN 323 (973)
Q Consensus 250 ~N~l~~~~~~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 323 (973)
+|+++ .+|......++|++|+|++|+ +++..+..|..+ ++|+.|++++|++++..+. .+++|+.|++.++
T Consensus 165 ~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 165 NNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp SCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 55444 233222222455555555553 554444455555 5555555555555533222 3445555555443
No 340
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=1.1e-24 Score=246.71 Aligned_cols=190 Identities=17% Similarity=0.230 Sum_probs=123.7
Q ss_pred ccccccceEEccCCcCCCC---CCcccccCCCCCCEEEcccCCCCCCCChhh----hcc---------CCCCeeeccccc
Q 002061 165 VNLTQLVSLSIGDNVYDEA---EIPESIGNLKNLTYLFLAHCNLRGRIPESI----SEL---------RELGTLDICRNK 228 (973)
Q Consensus 165 ~~l~~L~~L~l~~n~l~~~---~ip~~~~~l~~L~~L~L~~n~l~~~~~~~~----~~l---------~~L~~L~L~~N~ 228 (973)
..+++|++|+|++|.+... .+|..+..+++|++|+|++|.+++..+..+ ..+ ++|++|+|++|+
T Consensus 91 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~ 170 (386)
T 2ca6_A 91 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNR 170 (386)
T ss_dssp TTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSC
T ss_pred hhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCC
Confidence 4455555555555555432 244555666666666666666653333333 233 677777777777
Q ss_pred cc-CCCc---hhhhccccccEEEeeccccCC-----cCCccccccccccEEEeeccccc----cccCCccCCCCCccEEE
Q 002061 229 IS-GEFP---RSIRKLQKLWKIELYANNLTG-----ELPAELGNLTLLQEFDISSNQMY----GKLPEEIGNLKNLTVFQ 295 (973)
Q Consensus 229 l~-~~~~---~~l~~l~~L~~L~L~~N~l~~-----~~~~~l~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~ 295 (973)
++ +.++ ..+..+++|++|+|++|+++. ..+..+..+++|++|+|++|.++ ..+|..+..+++|+.|+
T Consensus 171 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~ 250 (386)
T 2ca6_A 171 LENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELG 250 (386)
T ss_dssp CTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEE
T ss_pred CCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEE
Confidence 76 2333 355667777777777777762 23336677777777777777775 45666777777788888
Q ss_pred cccCCCCCC----CCCCc--CCcccceeeeccCCccCC----CCCccc-cccccccccccccccccccCC
Q 002061 296 CFKNNFSGE----FPSGF--GDMRKLFAFSIYGNRFSG----PFPENL-GRYTALTDVDISENQFSGSFP 354 (973)
Q Consensus 296 l~~N~l~~~----~p~~~--~~l~~L~~L~l~~N~l~~----~~~~~l-~~l~~L~~L~Ls~N~l~~~~p 354 (973)
+++|.+++. ++..+ +.+++|+.|+|++|.+++ .+|..+ .++++|++|+|++|++++..|
T Consensus 251 L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 251 LNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp CTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred CCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 888877754 34445 347788888888888876 366666 567888999999998886654
No 341
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=2.8e-23 Score=227.33 Aligned_cols=225 Identities=15% Similarity=0.133 Sum_probs=184.2
Q ss_pred CccCcEeeCCCCcccCcCCh---hhhCCCCCcEEEecCCcccCCCCc-c--cCCCCCCEEeccCccCCCccc----cccc
Q 002061 96 LQSLTVLSLPFNVLSGKLPL---ELSNCSNLKVLNVTGNAMVGSVPD-L--SALKNLEIFDLSINYFTGRFP----RWVV 165 (973)
Q Consensus 96 l~~L~~L~Ls~n~l~~~~p~---~l~~l~~L~~L~L~~n~l~~~~~~-l--~~l~~L~~L~Ls~n~l~~~~~----~~~~ 165 (973)
-..++.|.++++.++...-. .+..+++|++|+|++|.+.+..+. + +.+++|++|+|++|.+++..+ ..+.
T Consensus 63 ~~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~ 142 (310)
T 4glp_A 63 ALRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQW 142 (310)
T ss_dssp SCCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTT
T ss_pred hcceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhh
Confidence 34578888888887642111 233457799999999999887664 5 899999999999999997655 4556
Q ss_pred cccccceEEccCCcCCCCCCcccccCCCCCCEEEcccCCCCCC--C--ChhhhccCCCCeeecccccccCCCch----hh
Q 002061 166 NLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGR--I--PESISELRELGTLDICRNKISGEFPR----SI 237 (973)
Q Consensus 166 ~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~--~--~~~~~~l~~L~~L~L~~N~l~~~~~~----~l 237 (973)
.+++|++|++++|.+.. ..|..++.+++|++|+|++|++.+. + +..++.+++|++|+|++|+++ .++. .+
T Consensus 143 ~~~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~ 220 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPA-FSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALA 220 (310)
T ss_dssp BCSCCCEEEEECCSSCC-CCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHH
T ss_pred hccCCCEEEeeCCCcch-hhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHH
Confidence 89999999999999964 3457889999999999999998752 2 233478999999999999997 3333 35
Q ss_pred hccccccEEEeeccccCCcCCcccccc---ccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccc
Q 002061 238 RKLQKLWKIELYANNLTGELPAELGNL---TLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRK 314 (973)
Q Consensus 238 ~~l~~L~~L~L~~N~l~~~~~~~l~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 314 (973)
+.+++|++|+|++|++++..|..+..+ ++|++|+|++|+++ .+|..+. ++|+.|++++|+|++. |. +..+++
T Consensus 221 ~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~ 295 (310)
T 4glp_A 221 AAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPE 295 (310)
T ss_dssp HHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCC
T ss_pred hcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCC
Confidence 788999999999999998878887776 69999999999999 6788775 7999999999999964 33 688899
Q ss_pred ceeeeccCCccCC
Q 002061 315 LFAFSIYGNRFSG 327 (973)
Q Consensus 315 L~~L~l~~N~l~~ 327 (973)
|+.|++++|++++
T Consensus 296 L~~L~L~~N~l~~ 308 (310)
T 4glp_A 296 VDNLTLDGNPFLV 308 (310)
T ss_dssp CSCEECSSTTTSC
T ss_pred ccEEECcCCCCCC
Confidence 9999999999974
No 342
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=1.4e-22 Score=212.77 Aligned_cols=196 Identities=16% Similarity=0.163 Sum_probs=97.6
Q ss_pred cccEEEeeccccccccCCccCCCCCccEEEcccCC-CCCCCCCCcCCcccceeeeccC-CccCCCCCccccccccccccc
Q 002061 266 LLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNN-FSGEFPSGFGDMRKLFAFSIYG-NRFSGPFPENLGRYTALTDVD 343 (973)
Q Consensus 266 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~~~~l~~l~~L~~L~ 343 (973)
+|++|++++|++++..+..|.++++|++|++++|+ ++...+..|..+++|++|++++ |++++..+..|..+++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 44455555555544333344444455555555443 4433333444445555555544 444444444455555555555
Q ss_pred cccccccccCChhhhhhhhHHHHHhhhccCCCCccccccCccccc---eEecccc-ccccCCCccccCCCCcc-eEeccC
Q 002061 344 ISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQ---RLRISDN-HLSGKIPDGLWALPNVG-MLDFGD 418 (973)
Q Consensus 344 Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~---~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~L~~ 418 (973)
+++|++++ +|. +..+++|+ +|++++| ++++..+..|..+++|+ .|++++
T Consensus 112 l~~n~l~~-------------------------lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~ 165 (239)
T 2xwt_C 112 IFNTGLKM-------------------------FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYN 165 (239)
T ss_dssp EEEECCCS-------------------------CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCS
T ss_pred CCCCCCcc-------------------------ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCC
Confidence 55555542 111 33334444 6666666 66555555555555555 555555
Q ss_pred CcCCCCCCCCCCCCCCCCEEEcccCC-CCCCCChhhhcC-CCCCEEEccCCcCCCCccccccccccCCEEEcCCc
Q 002061 419 NDFTGGISPLIGLSTSLSQLVLQNNR-FSGELPSELGRL-TNLERLILTNNNFSGKIPSALGALRQLSSLHLEEN 491 (973)
Q Consensus 419 N~l~~~~~~~~~~~~~L~~L~L~~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 491 (973)
|+++.+++..|.. ++|+.|+|++|+ +++..+..|.++ ++|+.|+|++|++++..+. .+++|+.|+++++
T Consensus 166 n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 166 NGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 5555444444433 455555665553 554444555555 5555566655555532222 3445555555544
No 343
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=2.3e-22 Score=220.04 Aligned_cols=206 Identities=16% Similarity=0.140 Sum_probs=100.4
Q ss_pred cccEEEeeccccCCcCCccc--cccccccEEEeeccccccccC----CccCCCCCccEEEcccCCCCCCCCCCcCCcccc
Q 002061 242 KLWKIELYANNLTGELPAEL--GNLTLLQEFDISSNQMYGKLP----EEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKL 315 (973)
Q Consensus 242 ~L~~L~L~~N~l~~~~~~~l--~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 315 (973)
+|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..+++|++|++++|++.+..+..|+.+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 34444444444444444444 444445555555554443222 122334455555555555544444445555555
Q ss_pred eeeeccCCccCCC----CCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEe
Q 002061 316 FAFSIYGNRFSGP----FPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLR 391 (973)
Q Consensus 316 ~~L~l~~N~l~~~----~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~ 391 (973)
++|++++|++.+. .+..++.+++|++|+|++|+++ .+|.... ..++.+++|++|+
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~--------------------~l~~~l~~L~~L~ 230 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCA--------------------ALAAAGVQPHSLD 230 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHH--------------------HHHHHTCCCSSEE
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHH--------------------HHHhcCCCCCEEE
Confidence 5555555554321 1222355667777777777775 1111100 0134556777777
Q ss_pred ccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCC
Q 002061 392 ISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSG 471 (973)
Q Consensus 392 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 471 (973)
|++|+|++..|..+..+. .+++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++
T Consensus 231 Ls~N~l~~~~p~~~~~~~---------------------~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~ 286 (310)
T 4glp_A 231 LSHNSLRATVNPSAPRCM---------------------WSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNR 286 (310)
T ss_dssp CTTSCCCCCCCSCCSSCC---------------------CCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCS
T ss_pred CCCCCCCccchhhHHhcc---------------------CcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCC
Confidence 777777766666654441 1134444444444444 3333332 455555555555553
Q ss_pred CccccccccccCCEEEcCCcccc
Q 002061 472 KIPSALGALRQLSSLHLEENALT 494 (973)
Q Consensus 472 ~~p~~~~~l~~L~~L~Ls~N~l~ 494 (973)
. |. +..+++|+.|+|++|+++
T Consensus 287 ~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 287 A-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp C-CC-TTSCCCCSCEECSSTTTS
T ss_pred C-ch-hhhCCCccEEECcCCCCC
Confidence 2 22 444555555555555554
No 344
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=1.7e-24 Score=245.16 Aligned_cols=221 Identities=16% Similarity=0.203 Sum_probs=138.7
Q ss_pred cCChhhhCCCCCcEEEecCCcccCCC-----CcccCCCCCCEEeccCccCC---CccccccccccccceEEccCCcCCCC
Q 002061 112 KLPLELSNCSNLKVLNVTGNAMVGSV-----PDLSALKNLEIFDLSINYFT---GRFPRWVVNLTQLVSLSIGDNVYDEA 183 (973)
Q Consensus 112 ~~p~~l~~l~~L~~L~L~~n~l~~~~-----~~l~~l~~L~~L~Ls~n~l~---~~~~~~~~~l~~L~~L~l~~n~l~~~ 183 (973)
.++..+..+++|++|+|++|.+.... ..+..+++|++|+|++|.+. +.+|..+..
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~----------------- 85 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRL----------------- 85 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHH-----------------
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHH-----------------
Confidence 45666777777777777777765432 12556666666666665432 222222111
Q ss_pred CCcccccCCCCCCEEEcccCCCCC----CCChhhhccCCCCeeecccccccCCCchhhhc----c---------ccccEE
Q 002061 184 EIPESIGNLKNLTYLFLAHCNLRG----RIPESISELRELGTLDICRNKISGEFPRSIRK----L---------QKLWKI 246 (973)
Q Consensus 184 ~ip~~~~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~----l---------~~L~~L 246 (973)
+...+..+++|++|+|++|++++ .+|..+..+++|++|+|++|.+++..+..+.. + ++|++|
T Consensus 86 -l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L 164 (386)
T 2ca6_A 86 -LLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSI 164 (386)
T ss_dssp -HHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEE
T ss_pred -HHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEE
Confidence 12334788999999999999987 36778888999999999999987554444443 3 788888
Q ss_pred EeeccccC-CcCC---ccccccccccEEEeecccccc-----ccCCccCCCCCccEEEcccCCCC----CCCCCCcCCcc
Q 002061 247 ELYANNLT-GELP---AELGNLTLLQEFDISSNQMYG-----KLPEEIGNLKNLTVFQCFKNNFS----GEFPSGFGDMR 313 (973)
Q Consensus 247 ~L~~N~l~-~~~~---~~l~~l~~L~~L~Ls~N~l~~-----~~p~~~~~l~~L~~L~l~~N~l~----~~~p~~~~~l~ 313 (973)
+|++|+++ +.++ ..+..+++|++|+|++|+++. ..|..+..+++|+.|++++|.++ ..+|..+..++
T Consensus 165 ~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~ 244 (386)
T 2ca6_A 165 ICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWP 244 (386)
T ss_dssp ECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCT
T ss_pred ECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCC
Confidence 88888887 3344 356677788888888887762 33446666777777777777764 34444555555
Q ss_pred cceeeeccCCccCCC----CCcccc--cccccccccccccccc
Q 002061 314 KLFAFSIYGNRFSGP----FPENLG--RYTALTDVDISENQFS 350 (973)
Q Consensus 314 ~L~~L~l~~N~l~~~----~~~~l~--~l~~L~~L~Ls~N~l~ 350 (973)
+|+.|+|++|.+++. ++..+. .+++|++|+|++|.++
T Consensus 245 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~ 287 (386)
T 2ca6_A 245 NLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIE 287 (386)
T ss_dssp TCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCB
T ss_pred CcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCC
Confidence 555555555555433 223331 2444555555555544
No 345
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=5e-22 Score=216.81 Aligned_cols=194 Identities=22% Similarity=0.302 Sum_probs=102.5
Q ss_pred ccCCccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCCCCcccCCCCCCEEeccCccCCCccccccccccccce
Q 002061 93 ISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVS 172 (973)
Q Consensus 93 l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 172 (973)
...+++|++|++++|.++. +| .+..+++|++|+|++|.+.+.++ +..+++|++|+|++|.+++. ..+..+++|++
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~-~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~ 111 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP-LKNLTKITELELSGNPLKNV--SAIAGLQSIKT 111 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCE
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh-HccCCCCCEEEccCCcCCCc--hhhcCCCCCCE
Confidence 3456666666666666653 34 46666666666666666666555 66666666666666666542 24555555555
Q ss_pred EEccCCcCCCCCCcccccCCCCCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccc
Q 002061 173 LSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANN 252 (973)
Q Consensus 173 L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~ 252 (973)
|++++|.++. ++ .+..+++|++|++++|++++..+ +..+++|++|+|++|++++..+ +..+++|++|+|++|+
T Consensus 112 L~l~~n~l~~--~~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 112 LDLTSTQITD--VT-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNK 184 (308)
T ss_dssp EECTTSCCCC--CG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EECCCCCCCC--ch-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCc
Confidence 5555555542 22 25555555555555555553322 5555555555555555553222 4455555555555555
Q ss_pred cCCcCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCC
Q 002061 253 LTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFS 302 (973)
Q Consensus 253 l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 302 (973)
+++..+ +..+++|++|+|++|++++.. .+..+++|+.|++++|.++
T Consensus 185 l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 185 ISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp CCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEE
T ss_pred cCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeee
Confidence 543222 444455555555555544322 1444444444444444443
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=2.6e-22 Score=219.06 Aligned_cols=213 Identities=19% Similarity=0.279 Sum_probs=168.8
Q ss_pred ccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCCCCcccCCCCCCEEeccCccCCCccccccccccccceEEcc
Q 002061 97 QSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIG 176 (973)
Q Consensus 97 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~ 176 (973)
..+..+.+..+.+++.+ .+..+++|++|++++|.+...+ .+..+++|++|+|++|.+++..+ +..+++|++|+++
T Consensus 19 ~~~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~ 93 (308)
T 1h6u_A 19 ANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTTIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELS 93 (308)
T ss_dssp HHHHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECC
T ss_pred HHHHHHHhCCCCcCcee--cHHHcCCcCEEEeeCCCccCch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEcc
Confidence 33445566677776543 3567889999999999998754 78999999999999999986554 8899999999999
Q ss_pred CCcCCCCCCcccccCCCCCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccccCCc
Q 002061 177 DNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGE 256 (973)
Q Consensus 177 ~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 256 (973)
+|.+.. + +.+..+++|++|+|++|++++. + .+..+++|++|++++|++++..+ +..+++|++|+|++|++++.
T Consensus 94 ~n~l~~--~-~~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~ 166 (308)
T 1h6u_A 94 GNPLKN--V-SAIAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDL 166 (308)
T ss_dssp SCCCSC--C-GGGTTCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred CCcCCC--c-hhhcCCCCCCEEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCC
Confidence 998864 3 3688899999999999999853 3 38888999999999999885433 88888888888888888854
Q ss_pred CCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCC
Q 002061 257 LPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSG 327 (973)
Q Consensus 257 ~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 327 (973)
+. +..+++|+.|++++|++++..+ +..+++|++|++++|++++..+ +..+++|+.|++++|++++
T Consensus 167 -~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 167 -TP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp -GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred -hh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 33 7888888888888888875443 7778888888888888886543 6777888888888887764
No 347
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=3.7e-23 Score=241.96 Aligned_cols=218 Identities=22% Similarity=0.319 Sum_probs=137.9
Q ss_pred cccccCCCCCCCCCC-----Cccee-eeCCCCCceEEEeecCCCCCccccccccCCccCcEeeCCCCcccCcCChhhhCC
Q 002061 47 HGVLDSWKESADSPC-----GFSGI-TCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNC 120 (973)
Q Consensus 47 ~~~~~~W~~~~~~~c-----~w~gv-~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l 120 (973)
...+.+|..+. .+| .|.|+ .|.. ++++.|+|+++++++ +|..+. ++|++|+|++|.|+ .+| ..+
T Consensus 30 ~~~l~~W~~~~-~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l 99 (571)
T 3cvr_A 30 FSAWDKWEKQA-LPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELP 99 (571)
T ss_dssp HHHHHHHHTTC-CTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCC
T ss_pred HHHHHHHhccC-Cccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---ccc
Confidence 34567786654 467 79999 7863 578999999999987 777664 78999999999988 677 457
Q ss_pred CCCcEEEecCCcccCCCCcccCCCCCCEEeccCccCCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEc
Q 002061 121 SNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFL 200 (973)
Q Consensus 121 ~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L 200 (973)
++|++|+|++|++++.+. +.. +|++|+|++|.+++ +|. .+++|+.|++++|.++. +|. .+++|++|+|
T Consensus 100 ~~L~~L~Ls~N~l~~ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~--lp~---~l~~L~~L~L 167 (571)
T 3cvr_A 100 ASLEYLDACDNRLSTLPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM--LPE---LPTSLEVLSV 167 (571)
T ss_dssp TTCCEEECCSSCCSCCCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC--CCC---CCTTCCEEEC
T ss_pred CCCCEEEccCCCCCCcch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc--CCC---cCCCcCEEEC
Confidence 888888888888888665 655 88888888888876 444 46666666666666653 444 4556666666
Q ss_pred ccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccccCCcCCccccccccccEEEeeccccccc
Q 002061 201 AHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGK 280 (973)
Q Consensus 201 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 280 (973)
++|+|++ +|. |. ++|++|+|++|+|+ .+|. +.. +| +...+.|+.|+|++|+|+ .
T Consensus 168 s~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L-----------------~~~~~~L~~L~Ls~N~l~-~ 221 (571)
T 3cvr_A 168 RNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RN-----------------HHSEETEIFFRCRENRIT-H 221 (571)
T ss_dssp CSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC---------------------------CCEEEECCSSCCC-C
T ss_pred CCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hh-----------------hcccccceEEecCCCcce-e
Confidence 6666664 444 44 56666666666665 3443 332 33 000011255555555555 3
Q ss_pred cCCccCCCCCccEEEcccCCCCCCCCCCcCCc
Q 002061 281 LPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDM 312 (973)
Q Consensus 281 ~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l 312 (973)
+|..+..+++|+.|++++|.+++.+|..++.+
T Consensus 222 lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 222 IPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp CCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred cCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 45555555555555555555555555444443
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.85 E-value=7.6e-21 Score=211.70 Aligned_cols=217 Identities=16% Similarity=0.055 Sum_probs=116.8
Q ss_pred cEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCCCCc-ccCCCCCCEEeccCccCCCccccccccccccceEEccCC
Q 002061 100 TVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPD-LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDN 178 (973)
Q Consensus 100 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n 178 (973)
++++-++++++ .+|..+ .+++++|+|++|+|+..++. |+++++|++|+|++|++.+.+|.
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~---------------- 72 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEA---------------- 72 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECT----------------
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccCh----------------
Confidence 44555566665 455544 24566666666666555542 55666666666666655433321
Q ss_pred cCCCCCCcccccCCCCCCE-EEcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeec-cccCCc
Q 002061 179 VYDEAEIPESIGNLKNLTY-LFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYA-NNLTGE 256 (973)
Q Consensus 179 ~l~~~~ip~~~~~l~~L~~-L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~-N~l~~~ 256 (973)
..|.++++|++ +.+++|+++...|..|..+++|++|++++|+|+...+..+....++..|++.+ |+++..
T Consensus 73 --------~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l 144 (350)
T 4ay9_X 73 --------DVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTI 144 (350)
T ss_dssp --------TSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEE
T ss_pred --------hHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccc
Confidence 23444554443 34445555555555566666666666666666544444455555555666543 445533
Q ss_pred CCccccccc-cccEEEeeccccccccCCccCCCCCccEEEccc-CCCCCCCCCCcCCcccceeeeccCCccCCCCCcccc
Q 002061 257 LPAELGNLT-LLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFK-NNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLG 334 (973)
Q Consensus 257 ~~~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~ 334 (973)
.+..|..+. .++.|+|++|+++ .+|.......+|+.|++++ |.++...+..|..+++|+.|++++|+|+...+..+.
T Consensus 145 ~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~ 223 (350)
T 4ay9_X 145 ERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLE 223 (350)
T ss_dssp CTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCT
T ss_pred cccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhc
Confidence 334444443 4666666666666 3444444445666666654 344433334566666666666666666654444555
Q ss_pred cccccccccc
Q 002061 335 RYTALTDVDI 344 (973)
Q Consensus 335 ~l~~L~~L~L 344 (973)
++++|+.+++
T Consensus 224 ~L~~L~~l~~ 233 (350)
T 4ay9_X 224 NLKKLRARST 233 (350)
T ss_dssp TCCEEECTTC
T ss_pred cchHhhhccC
Confidence 5555554443
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.85 E-value=1.5e-20 Score=209.41 Aligned_cols=242 Identities=16% Similarity=0.116 Sum_probs=126.0
Q ss_pred CEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccccCCcCC-ccccccccccE-EEee
Q 002061 196 TYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELP-AELGNLTLLQE-FDIS 273 (973)
Q Consensus 196 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~-L~Ls 273 (973)
++++.++++++ .+|..+ .+++++|+|++|+|+...+.+|.++++|++|+|++|++.+.+| ..|.+++++++ +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 34555555555 444443 2355566666666653333445555566666666665544333 34555555543 4445
Q ss_pred ccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccC-CccCCCCCcccccccccccccccccccccc
Q 002061 274 SNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYG-NRFSGPFPENLGRYTALTDVDISENQFSGS 352 (973)
Q Consensus 274 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 352 (973)
+|+++...|..|..+++|++|++++|++....+..+....++..|++.+ |++....+..|..+.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~--------------- 153 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS--------------- 153 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSB---------------
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcc---------------
Confidence 5666555555556666666666666665544444444444444444433 233322222222221
Q ss_pred CChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCccccCCCCcceEecc-CCcCCCCCCCCCCC
Q 002061 353 FPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFG-DNDFTGGISPLIGL 431 (973)
Q Consensus 353 ~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~-~N~l~~~~~~~~~~ 431 (973)
..++.|+|++|+|+. +|...+...+|+.|+++ +|.++.+++..|..
T Consensus 154 --------------------------------~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~ 200 (350)
T 4ay9_X 154 --------------------------------FESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHG 200 (350)
T ss_dssp --------------------------------SSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTT
T ss_pred --------------------------------hhhhhhccccccccC-CChhhccccchhHHhhccCCcccCCCHHHhcc
Confidence 235556666666653 33333344556666665 35555555556666
Q ss_pred CCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcc
Q 002061 432 STSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENA 492 (973)
Q Consensus 432 ~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 492 (973)
+++|++|+|++|+|+...+..| .+|+.|.+.++.--..+| .+.++++|+.++++++.
T Consensus 201 l~~L~~LdLs~N~l~~lp~~~~---~~L~~L~~l~~~~l~~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 201 ASGPVILDISRTRIHSLPSYGL---ENLKKLRARSTYNLKKLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp EECCSEEECTTSCCCCCCSSSC---TTCCEEECTTCTTCCCCC-CTTTCCSCCEEECSCHH
T ss_pred CcccchhhcCCCCcCccChhhh---ccchHhhhccCCCcCcCC-CchhCcChhhCcCCCCc
Confidence 7777777777777764333333 344444443333222555 36777777888777653
No 350
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.84 E-value=8.5e-22 Score=211.31 Aligned_cols=142 Identities=17% Similarity=0.157 Sum_probs=115.4
Q ss_pred CCcccCcccccCceEEEEEEecCCCcEEEEEeeeccc--------------------cHHHHHHHHHHHHhcCCCceeeE
Q 002061 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD--------------------GVKVFAAEMEILGKIRHRNILKL 736 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--------------------~~~~~~~E~~~l~~l~hpniv~l 736 (973)
.|++.+.||+|+||.||+|++ .+|+.||||++.... ....+.+|++++++++| +++
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~---~~v 166 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG---LAV 166 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT---SSS
T ss_pred EEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC---CCc
Confidence 456779999999999999999 779999999985421 24568899999999994 555
Q ss_pred EEEEEeCCeeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCC
Q 002061 737 YACLLKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY 816 (973)
Q Consensus 737 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~ 816 (973)
.+++.. +..|+||||+++|+|.+ +.. .....++.|++.|++||| +.+|+||||||+||+++ ++
T Consensus 167 ~~~~~~-~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~-~~ 229 (282)
T 1zar_A 167 PKVYAW-EGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS-EE 229 (282)
T ss_dssp CCEEEE-ETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE-TT
T ss_pred CeEEec-cceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE-CC
Confidence 555443 45699999999999987 421 123468999999999999 78999999999999999 99
Q ss_pred CeEEecccCcccccCCCCcccccccCCccccccccccc
Q 002061 817 EPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAY 854 (973)
Q Consensus 817 ~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 854 (973)
.+||+|||+++. +..|+|||++.
T Consensus 230 ~vkl~DFG~a~~---------------~~~~~a~e~l~ 252 (282)
T 1zar_A 230 GIWIIDFPQSVE---------------VGEEGWREILE 252 (282)
T ss_dssp EEEECCCTTCEE---------------TTSTTHHHHHH
T ss_pred cEEEEECCCCeE---------------CCCCCHHHHHH
Confidence 999999999862 34578999874
No 351
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=1e-20 Score=194.04 Aligned_cols=179 Identities=22% Similarity=0.240 Sum_probs=151.5
Q ss_pred ceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCC
Q 002061 388 QRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNN 467 (973)
Q Consensus 388 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 467 (973)
+.++.+++.++ .+|..+ .++|++|++++|++++.++..|..+++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 56788888887 455544 458899999999998888888888999999999999999777777888999999999999
Q ss_pred cCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhccccccccCCCccccccCCCCeeecCCCccCCCCCh
Q 002061 468 NFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPD 547 (973)
Q Consensus 468 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 547 (973)
++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++.+..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~- 165 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP- 165 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT-
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC-
Confidence 9997777778899999999999999998888888999999999999999997777778899999999999999887655
Q ss_pred hhhcccCceEEccCCccccccCcccccC
Q 002061 548 NLMKLKLSSIDLSENQLSGSVPLDFLRM 575 (973)
Q Consensus 548 ~l~~l~L~~l~ls~N~l~~~~p~~~~~~ 575 (973)
.++.|+++.|+++|.+|..+...
T Consensus 166 -----~l~~L~~~~n~~~g~ip~~~~~l 188 (208)
T 2o6s_A 166 -----GIRYLSEWINKHSGVVRNSAGSV 188 (208)
T ss_dssp -----TTHHHHHHHHHCTTTBBCTTSSB
T ss_pred -----CHHHHHHHHHhCCceeeccCccc
Confidence 36788899999999999765443
No 352
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=1.4e-20 Score=192.96 Aligned_cols=162 Identities=20% Similarity=0.185 Sum_probs=149.6
Q ss_pred cccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEc
Q 002061 385 KTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLIL 464 (973)
Q Consensus 385 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 464 (973)
++|++|+|++|++++..+..|..+++|++|++++|++++.++..|..+++|++|+|++|++++..+..|..+++|++|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 107 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELAL 107 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEc
Confidence 58999999999999887888899999999999999999988888999999999999999999877778899999999999
Q ss_pred cCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhccccccccCCCccccccCCCCeeecCCCccCCC
Q 002061 465 TNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGS 544 (973)
Q Consensus 465 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 544 (973)
++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|.+.+ .+++|+.|+++.|+++|.
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ 180 (208)
T 2o6s_A 108 NTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGV 180 (208)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTT
T ss_pred CCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCce
Confidence 9999998888889999999999999999998888889999999999999998874 466899999999999999
Q ss_pred CChhhhccc
Q 002061 545 IPDNLMKLK 553 (973)
Q Consensus 545 ~p~~l~~l~ 553 (973)
+|..+..+.
T Consensus 181 ip~~~~~l~ 189 (208)
T 2o6s_A 181 VRNSAGSVA 189 (208)
T ss_dssp BBCTTSSBC
T ss_pred eeccCcccc
Confidence 999887654
No 353
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=7.4e-21 Score=196.48 Aligned_cols=158 Identities=22% Similarity=0.275 Sum_probs=113.2
Q ss_pred CCCEEEcccCCCCCCCC-hhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhc
Q 002061 434 SLSQLVLQNNRFSGELP-SELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNL 512 (973)
Q Consensus 434 ~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 512 (973)
.+++|+|++|+|++..| ..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|+.|+|
T Consensus 33 ~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 112 (220)
T 2v70_A 33 YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLML 112 (220)
T ss_dssp TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEEC
T ss_pred CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEEC
Confidence 45677777777765533 34677777777777777777666667777777777888878777777777777788888888
Q ss_pred cccccccCCCccccccCCCCeeecCCCccCCCCChhhhccc-CceEEccCCccccccCcccc-c-CCCCccccCCCCCcc
Q 002061 513 ARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLDFL-R-MGGDGAFAGNEGLCL 589 (973)
Q Consensus 513 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-L~~l~ls~N~l~~~~p~~~~-~-~~~~~~~~~n~~lc~ 589 (973)
++|+|++..|..|..+++|+.|+|++|+|++..|..+..++ |+.|+|++|+|+|.|+..|. . +.....+.+++ .|+
T Consensus 113 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~l~~~~~~~~~~~~~~-~C~ 191 (220)
T 2v70_A 113 RSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNP-RCQ 191 (220)
T ss_dssp TTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGGHHHHHHHHHSCCBCCCC-EEE
T ss_pred CCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCchHHHHHHHHhcCccccCC-ccC
Confidence 88888877777788888888888888888877777777775 88888888888888886422 1 11112234443 677
Q ss_pred Ccc
Q 002061 590 DQS 592 (973)
Q Consensus 590 ~~~ 592 (973)
.|.
T Consensus 192 ~P~ 194 (220)
T 2v70_A 192 KPY 194 (220)
T ss_dssp ESG
T ss_pred CCh
Confidence 665
No 354
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.83 E-value=1.2e-20 Score=211.03 Aligned_cols=181 Identities=25% Similarity=0.251 Sum_probs=160.7
Q ss_pred cceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCC-CCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEcc
Q 002061 387 IQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIG-LSTSLSQLVLQNNRFSGELPSELGRLTNLERLILT 465 (973)
Q Consensus 387 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 465 (973)
-+.+++++|.|+ .+|..+. +.++.|+|++|+|++..+..+. .+++|+.|+|++|+|++..+..|.++++|++|+|+
T Consensus 20 ~~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 20 SNILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TTEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 468999999998 5676553 4689999999999999988887 89999999999999998888899999999999999
Q ss_pred CCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhccccccccCCCccc---cccCCCCeeecCCCccC
Q 002061 466 NNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSL---SLLSSLNALNLSGNKLT 542 (973)
Q Consensus 466 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~---~~l~~L~~L~L~~N~l~ 542 (973)
+|+|++..+..|..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 999998778889999999999999999999999999999999999999999996555556 67999999999999999
Q ss_pred CCCChhhhccc---CceEEccCCccccccCc
Q 002061 543 GSIPDNLMKLK---LSSIDLSENQLSGSVPL 570 (973)
Q Consensus 543 ~~~p~~l~~l~---L~~l~ls~N~l~~~~p~ 570 (973)
+..+..+..++ ++.|+|++|+|.|.|..
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~l 207 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLECDCKL 207 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEECCHHH
T ss_pred ccCHHHhhhccHhhcceEEecCCCccCCcCc
Confidence 76667777765 58999999999999875
No 355
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.83 E-value=1.2e-21 Score=237.95 Aligned_cols=233 Identities=15% Similarity=0.167 Sum_probs=121.7
Q ss_pred chHHHHHHHHHHHhcCCC-cccccCCCCCCCCCCCcceeeeCCCCCceEEEeecCCCCCccccccccCCccCcEe-----
Q 002061 29 LNVETQALIQFKSKLKDP-HGVLDSWKESADSPCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVL----- 102 (973)
Q Consensus 29 ~~~~~~aLl~~k~~~~d~-~~~~~~W~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L----- 102 (973)
...++++|+++......+ ...-..|.......+.|.+++++. .+++.++|.++++.. ++..+.....|+.+
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~ 206 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDED 206 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC--CccceEEeeCCCCCc-chhhHhhcCccCcccccCc
Confidence 467899999999887422 333457765555568899999874 789999999998886 34433333333332
Q ss_pred eCCCCcccCcCChhhhCCCCCcEEEecCCcccCCCCcccCCCCCCEEeccCccCCCccccccccccccceEEccCCcCCC
Q 002061 103 SLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDE 182 (973)
Q Consensus 103 ~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 182 (973)
+++.|.+. ..|..+..+.+|+.|+|++|.+...++.+..+++|++|+|++|.|+ .+|..|.++++|++|+|++|.++
T Consensus 207 ~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~- 283 (727)
T 4b8c_D 207 DDIENRMV-MPKDSKYDDQLWHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT- 283 (727)
T ss_dssp ----------------CCCCCCEEECTTSCCSCCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-
T ss_pred ccccccee-cChhhhccCCCCcEEECCCCCCCCCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-
Confidence 23333333 4467788888888888888888877777778888888888888888 67778888888888888888886
Q ss_pred CCCcccccCCCCCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhcccc-ccEEEeeccccCCcCCccc
Q 002061 183 AEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQK-LWKIELYANNLTGELPAEL 261 (973)
Q Consensus 183 ~~ip~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~-L~~L~L~~N~l~~~~~~~l 261 (973)
.+|..+++|++|++|+|++|.|+ .+|..|+.+++|++|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|..
T Consensus 284 -~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~- 360 (727)
T 4b8c_D 284 -SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE- 360 (727)
T ss_dssp -SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-
T ss_pred -ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc-
Confidence 56788888888888888888887 66777888888888888888888777777765432 234677777777766653
Q ss_pred cccccccEEEeecc
Q 002061 262 GNLTLLQEFDISSN 275 (973)
Q Consensus 262 ~~l~~L~~L~Ls~N 275 (973)
|+.|+++.|
T Consensus 361 -----l~~l~l~~n 369 (727)
T 4b8c_D 361 -----RRFIEINTD 369 (727)
T ss_dssp --------------
T ss_pred -----cceeEeecc
Confidence 455566655
No 356
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.83 E-value=1.4e-20 Score=194.36 Aligned_cols=140 Identities=24% Similarity=0.301 Sum_probs=105.0
Q ss_pred CCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhc
Q 002061 433 TSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNL 512 (973)
Q Consensus 433 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 512 (973)
++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|+...+..|.++++|+.|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 45667777777777666666777777777777777777666777777777777777777777666666777777777777
Q ss_pred cccccccCCCccccccCCCCeeecCCCccCCCCChhhhccc-CceEEccCCccccccCccc
Q 002061 513 ARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLDF 572 (973)
Q Consensus 513 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-L~~l~ls~N~l~~~~p~~~ 572 (973)
++|+|++..|..|..+++|+.|+|++|+|++..+..+..++ |+.|+|++|+|.|.|+..|
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~l~~ 172 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKW 172 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGGGHH
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCccHH
Confidence 77777777777788888888888888888876666677665 8888888888888887643
No 357
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=1.8e-20 Score=219.28 Aligned_cols=189 Identities=22% Similarity=0.308 Sum_probs=131.8
Q ss_pred CCcEEEecCCcccCCCCcccCCCCCCEEeccCccCCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcc
Q 002061 122 NLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLA 201 (973)
Q Consensus 122 ~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~ 201 (973)
+|+.|+|++|.+++.++.+. ++|++|+|++|.|+ .+| ..+++|++|++++|.++. +|. +.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~--ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST--LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSCCCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC--CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCccCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC--cch-hhc--CCCEEECC
Confidence 55555555555555444332 45555555555555 334 334556666666665543 555 443 77777777
Q ss_pred cCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccccCCcCCccccccccccEEEeecccccccc
Q 002061 202 HCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKL 281 (973)
Q Consensus 202 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 281 (973)
+|+|++ +|. .+++|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 777775 444 56777888888888774 554 46778888888888885 665 55 78888888888888 66
Q ss_pred CCccCCCCCc-------cEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCCcccccccc
Q 002061 282 PEEIGNLKNL-------TVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTA 338 (973)
Q Consensus 282 p~~~~~l~~L-------~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~ 338 (973)
|. +.. +| +.|++++|+|+ .+|..+..+++|+.|+|++|++++..|..+..+..
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 66 554 67 99999999999 57888888999999999999999988888877654
No 358
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=5.3e-20 Score=190.05 Aligned_cols=157 Identities=20% Similarity=0.256 Sum_probs=143.6
Q ss_pred cceEeccccccccCCCccccCCCCcceEeccCCcCCCCCC-CCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEcc
Q 002061 387 IQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGIS-PLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILT 465 (973)
Q Consensus 387 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 465 (973)
-+++++++|.++ .+|..+. +.++.|+|++|++++..+ ..|..+++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 13 ~~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 13 GTTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 358999999998 5676553 456899999999998854 568899999999999999998888899999999999999
Q ss_pred CCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhccccccccCCCccccccCCCCeeecCCCccCCCC
Q 002061 466 NNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSI 545 (973)
Q Consensus 466 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 545 (973)
+|++++..+..|..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|++++..
T Consensus 90 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 90 SNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp SSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 99999888889999999999999999999999999999999999999999999988999999999999999999999766
Q ss_pred C
Q 002061 546 P 546 (973)
Q Consensus 546 p 546 (973)
+
T Consensus 170 ~ 170 (220)
T 2v70_A 170 Y 170 (220)
T ss_dssp G
T ss_pred c
Confidence 5
No 359
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=3.2e-19 Score=185.51 Aligned_cols=136 Identities=25% Similarity=0.308 Sum_probs=84.0
Q ss_pred CCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhc
Q 002061 433 TSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNL 512 (973)
Q Consensus 433 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 512 (973)
++|++|+|++|+|++..|..|.++++|++|+|++|+|+...+..|..+++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 45556666666666555555666666666666666665444455566666666666666666555555666666666666
Q ss_pred cccccccCCCccccccCCCCeeecCCCccCCCCChhhhccc-CceEEccCCccccccC
Q 002061 513 ARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVP 569 (973)
Q Consensus 513 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-L~~l~ls~N~l~~~~p 569 (973)
++|+|+ .+|..+..+++|+.|+|++|+|++..+..+..++ |+.|+|++|+|.|.|+
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 666666 5566666666666666666666655445555554 6666666677666665
No 360
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=6.7e-20 Score=198.12 Aligned_cols=170 Identities=26% Similarity=0.358 Sum_probs=77.3
Q ss_pred CCCCCcEEEecCCcccCCCCcccCCCCCCEEeccCccCCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEE
Q 002061 119 NCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYL 198 (973)
Q Consensus 119 ~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L 198 (973)
.+++|++|++++|.+... +.+..+++|++|+|++|.+++..+ +..+++|++|++++|.++. + +.+..+++|++|
T Consensus 44 ~l~~L~~L~l~~~~i~~~-~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~--~-~~l~~l~~L~~L 117 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKSV-QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD--L-SSLKDLKKLKSL 117 (291)
T ss_dssp HHHTCCEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC--G-GGGTTCTTCCEE
T ss_pred hcCcccEEEccCCCcccC-hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC--C-hhhccCCCCCEE
Confidence 344444444444444333 224444444444444444443222 4444444444444444432 1 224445555555
Q ss_pred EcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccccCCcCCccccccccccEEEeeccccc
Q 002061 199 FLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMY 278 (973)
Q Consensus 199 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~ 278 (973)
+|++|++++. ..+..+++|++|++++|++++. ..+..+++|++|+|++|++++..+ +..+++|++|+|++|.++
T Consensus 118 ~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 118 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 191 (291)
T ss_dssp ECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCC
Confidence 5555555432 2344555555555555555432 344445555555555555543322 444555555555555554
Q ss_pred cccCCccCCCCCccEEEcccCCCC
Q 002061 279 GKLPEEIGNLKNLTVFQCFKNNFS 302 (973)
Q Consensus 279 ~~~p~~~~~l~~L~~L~l~~N~l~ 302 (973)
+ ++ .+..+++|+.|++++|+++
T Consensus 192 ~-l~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 192 D-LR-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp B-CG-GGTTCTTCSEEEEEEEEEE
T ss_pred C-Ch-hhccCCCCCEEECcCCccc
Confidence 2 22 2444445555555544444
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=7.8e-20 Score=197.59 Aligned_cols=188 Identities=24% Similarity=0.324 Sum_probs=158.4
Q ss_pred EEEeecCCCCCccccccccCCccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCCCCcccCCCCCCEEeccCcc
Q 002061 76 TEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINY 155 (973)
Q Consensus 76 ~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~ 155 (973)
..+.+....+++. ..+..+++|++|++++|.++. ++ .+..+++|++|+|++|++++.++ ++.+++|++|+|++|.
T Consensus 27 ~~~~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n~ 101 (291)
T 1h6t_A 27 IKDNLKKKSVTDA--VTQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENK 101 (291)
T ss_dssp HHHHTTCSCTTSE--ECHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSC
T ss_pred HHHHhcCCCcccc--cchhhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc-cccCCCCCEEECCCCc
Confidence 3344555555543 234678999999999999974 44 58999999999999999998777 9999999999999999
Q ss_pred CCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCch
Q 002061 156 FTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPR 235 (973)
Q Consensus 156 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 235 (973)
+++. ..+..+++|++|++++|.+.. + +.+..+++|++|++++|++++. ..+..+++|++|+|++|++++..+
T Consensus 102 l~~~--~~l~~l~~L~~L~L~~n~i~~--~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~- 173 (291)
T 1h6t_A 102 VKDL--SSLKDLKKLKSLSLEHNGISD--I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP- 173 (291)
T ss_dssp CCCG--GGGTTCTTCCEEECTTSCCCC--C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-
T ss_pred CCCC--hhhccCCCCCEEECCCCcCCC--C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh-
Confidence 9863 348999999999999999875 3 5788999999999999999965 679999999999999999996554
Q ss_pred hhhccccccEEEeeccccCCcCCccccccccccEEEeecccccc
Q 002061 236 SIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYG 279 (973)
Q Consensus 236 ~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~ 279 (973)
+..+++|++|+|++|.+++ ++ .+..+++|+.|++++|++..
T Consensus 174 -l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 174 -LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp -GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred -hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 8999999999999999995 44 48999999999999999875
No 362
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=1.1e-19 Score=215.34 Aligned_cols=187 Identities=24% Similarity=0.325 Sum_probs=108.7
Q ss_pred EEeecCCCCCccccccccCCccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCCCCcccCCCCCCEEeccCccC
Q 002061 77 EISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYF 156 (973)
Q Consensus 77 ~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l 156 (973)
.+.+....+++.+ .+..|++|+.|+|++|.+.. +| .|..+++|+.|+|++|.+.+.++ +..+++|+.|+|++|.+
T Consensus 25 ~l~l~~~~i~~~~--~~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l 99 (605)
T 1m9s_A 25 KDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP-LTNLKNLGWLFLDENKI 99 (605)
T ss_dssp HHHTTCSCTTSEE--CHHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG-GGGCTTCCEEECCSSCC
T ss_pred HHhccCCCccccc--chhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh-hccCCCCCEEECcCCCC
Confidence 3344444444332 24566666777777766653 33 46666677777777776666555 66666666666666666
Q ss_pred CCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchh
Q 002061 157 TGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRS 236 (973)
Q Consensus 157 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 236 (973)
++. ..+..+++|++|+|++|.+.. + +.+..+++|+.|+|++|++++. ..+..+++|+.|+|++|+|++..|
T Consensus 100 ~~l--~~l~~l~~L~~L~Ls~N~l~~--l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-- 170 (605)
T 1m9s_A 100 KDL--SSLKDLKKLKSLSLEHNGISD--I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-- 170 (605)
T ss_dssp CCC--TTSTTCTTCCEEECTTSCCCC--C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--
T ss_pred CCC--hhhccCCCCCEEEecCCCCCC--C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--
Confidence 542 245666666666666666543 2 3455566666666666666543 455566666666666666654433
Q ss_pred hhccccccEEEeeccccCCcCCccccccccccEEEeecccccc
Q 002061 237 IRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYG 279 (973)
Q Consensus 237 l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~ 279 (973)
+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.+.+
T Consensus 171 l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 171 LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 55566666666666666532 235555666666666665553
No 363
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=1.3e-19 Score=187.19 Aligned_cols=153 Identities=20% Similarity=0.218 Sum_probs=142.0
Q ss_pred ceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCC
Q 002061 388 QRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNN 467 (973)
Q Consensus 388 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 467 (973)
+.+++++|.++ .+|..+. ++++.|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 67899999998 5676554 78999999999999988889999999999999999999888999999999999999999
Q ss_pred cCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhccccccccCCCccccccCCCCeeecCCCccCC
Q 002061 468 NFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTG 543 (973)
Q Consensus 468 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 543 (973)
+|+...+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+++.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 9997777788999999999999999999999999999999999999999998888889999999999999999985
No 364
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=1.6e-19 Score=213.79 Aligned_cols=202 Identities=22% Similarity=0.284 Sum_probs=161.9
Q ss_pred CccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCCCCcccCCCCCCEEeccCccCCCccccccccccccceEEc
Q 002061 96 LQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSI 175 (973)
Q Consensus 96 l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l 175 (973)
+..+..+.++.+.+++.++ +..|++|+.|+|++|.+...+ .++.+++|+.|+|++|.+++..+ +..+++|+.|+|
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L 94 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFL 94 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEEC
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEEC
Confidence 4556777888888876544 678999999999999998764 68999999999999999997655 889999999999
Q ss_pred cCCcCCCCCCcccccCCCCCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccccCC
Q 002061 176 GDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTG 255 (973)
Q Consensus 176 ~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 255 (973)
++|.+.. + +.+..+++|++|+|++|++++. ..+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.|++
T Consensus 95 s~N~l~~--l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~ 167 (605)
T 1m9s_A 95 DENKIKD--L-SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD 167 (605)
T ss_dssp CSSCCCC--C-TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCC
T ss_pred cCCCCCC--C-hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCC
Confidence 9998864 3 3688889999999999999853 4688889999999999988854 578888888888888888886
Q ss_pred cCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcc
Q 002061 256 ELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMR 313 (973)
Q Consensus 256 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 313 (973)
..| +..+++|+.|+|++|++++. ..+..+++|+.|+|++|++.+.....+..+.
T Consensus 168 ~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~l~ 221 (605)
T 1m9s_A 168 IVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQSNLV 221 (605)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCCSSCE
T ss_pred chh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCcccccccEE
Confidence 555 78888888888888888753 3577888888888888888765444444333
No 365
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=1.5e-19 Score=202.06 Aligned_cols=159 Identities=24% Similarity=0.168 Sum_probs=145.3
Q ss_pred cccceEeccccccccCCCcccc-CCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEE
Q 002061 385 KTIQRLRISDNHLSGKIPDGLW-ALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLI 463 (973)
Q Consensus 385 ~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 463 (973)
+.++.|+|++|+|++..+..|. .+++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..+..|.++++|++|+
T Consensus 39 ~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 118 (361)
T 2xot_A 39 SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLL 118 (361)
T ss_dssp TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEE
Confidence 4589999999999988888887 999999999999999999999999999999999999999988888999999999999
Q ss_pred ccCCcCCCCccccccccccCCEEEcCCcccccCCCccc---cccccccchhccccccccCCCccccccCC--CCeeecCC
Q 002061 464 LTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEM---GDCARIVDLNLARNSLSGNIPRSLSLLSS--LNALNLSG 538 (973)
Q Consensus 464 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~--L~~L~L~~ 538 (973)
|++|+|++..|..|..+++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|++..+..|..++. ++.|+|++
T Consensus 119 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~ 198 (361)
T 2xot_A 119 LYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHN 198 (361)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCS
T ss_pred CCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecC
Confidence 99999998889999999999999999999997766666 67999999999999999777778888887 48999999
Q ss_pred CccCC
Q 002061 539 NKLTG 543 (973)
Q Consensus 539 N~l~~ 543 (973)
|++..
T Consensus 199 N~~~C 203 (361)
T 2xot_A 199 NPLEC 203 (361)
T ss_dssp SCEEC
T ss_pred CCccC
Confidence 99984
No 366
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=1.3e-18 Score=180.90 Aligned_cols=158 Identities=22% Similarity=0.234 Sum_probs=144.0
Q ss_pred cccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEc
Q 002061 385 KTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLIL 464 (973)
Q Consensus 385 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 464 (973)
.+-+.++.+++.++ .+|..+. ++|+.|+|++|++++..+..|..+++|++|+|++|+|+...+..|..+++|++|+|
T Consensus 19 Cs~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 95 (229)
T 3e6j_A 19 CSGTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDL 95 (229)
T ss_dssp EETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred EeCCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEEC
Confidence 35678999999998 6676553 89999999999999999999999999999999999999777788899999999999
Q ss_pred cCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhccccccccCCCccccccCCCCeeecCCCccCCC
Q 002061 465 TNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGS 544 (973)
Q Consensus 465 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 544 (973)
++|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++++.
T Consensus 96 s~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 96 GTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred CCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 999999888888999999999999999999 6788899999999999999999987778899999999999999999976
Q ss_pred CC
Q 002061 545 IP 546 (973)
Q Consensus 545 ~p 546 (973)
.+
T Consensus 175 c~ 176 (229)
T 3e6j_A 175 CR 176 (229)
T ss_dssp BG
T ss_pred cc
Confidence 65
No 367
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.76 E-value=7.7e-19 Score=186.64 Aligned_cols=171 Identities=23% Similarity=0.286 Sum_probs=121.2
Q ss_pred CCccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCCCCcccCCCCCCEEeccCccCCCccccccccccccceEE
Q 002061 95 ALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLS 174 (973)
Q Consensus 95 ~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 174 (973)
.+.++..++++.|.+++ ++ .+..+++|++|++++|.++..+ .++.+++|++|+|++|.+++..+ +..+++|++|+
T Consensus 17 ~l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQSLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcccch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 45666777777777764 33 5677777888888887777654 67777788888888887775544 77777777777
Q ss_pred ccCCcCCCCCCcccccCCCCCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccccC
Q 002061 175 IGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLT 254 (973)
Q Consensus 175 l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 254 (973)
+++|.++. +|.... ++|++|+|++|++++. +.+..+++|++|+|++|+|++. + .+..+++|++|+|++|+++
T Consensus 92 L~~N~l~~--l~~~~~--~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 92 VNRNRLKN--LNGIPS--ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp CCSSCCSC--CTTCCC--SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred CCCCccCC--cCcccc--CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 77777753 333222 7788888888887753 3577778888888888887743 3 5777777777777777777
Q ss_pred CcCCccccccccccEEEeeccccccc
Q 002061 255 GELPAELGNLTLLQEFDISSNQMYGK 280 (973)
Q Consensus 255 ~~~~~~l~~l~~L~~L~Ls~N~l~~~ 280 (973)
+. ..+..+++|+.|++++|.+.+.
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred ch--HHhccCCCCCEEeCCCCcccCC
Confidence 54 5677777788888887777643
No 368
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=2.1e-18 Score=173.95 Aligned_cols=113 Identities=27% Similarity=0.389 Sum_probs=76.1
Q ss_pred CCCEEEcccCCCCCCCCh-hhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhc
Q 002061 434 SLSQLVLQNNRFSGELPS-ELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNL 512 (973)
Q Consensus 434 ~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 512 (973)
+|++|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 566666666666655443 3666677777777777777666666777777777777777777666666666667777777
Q ss_pred cccccccCCCccccccCCCCeeecCCCccCCCCC
Q 002061 513 ARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIP 546 (973)
Q Consensus 513 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 546 (973)
++|+|++..|..|..+++|++|+|++|++++..+
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 7777766666666667777777777776665544
No 369
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=8e-20 Score=215.15 Aligned_cols=216 Identities=21% Similarity=0.198 Sum_probs=153.1
Q ss_pred CCcccceeeeccCCccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCccccccCccccce
Q 002061 310 GDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQR 389 (973)
Q Consensus 310 ~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~ 389 (973)
...++|+.|+|++|+++ .+|..++.+++|+.|++++|..... +..+....+..+..|..++.+++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~-----------l~~ll~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLT-----------IILLMRALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHH-----------HHHHHHHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhh-----------HHHHHHhcccccCCHHHHHHHHhccc
Confidence 45677778888888887 6788888888888888876642111 11122234566677788888888888
Q ss_pred Ee-ccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCc
Q 002061 390 LR-ISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNN 468 (973)
Q Consensus 390 L~-Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 468 (973)
|+ ++.|.+. +|..+.+++|.++..++ ..|+.|+|++|+|++ +|. ++.+++|+.|+|++|+
T Consensus 414 L~~l~~n~~~-----------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~ 474 (567)
T 1dce_A 414 VDPMRAAYLD-----------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNR 474 (567)
T ss_dssp HCGGGHHHHH-----------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSC
T ss_pred Ccchhhcccc-----------hhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccc
Confidence 88 7777653 35555666666654332 247788888888875 555 7888888888888888
Q ss_pred CCCCccccccccccCCEEEcCCcccccCCCccccccccccchhccccccccCC-CccccccCCCCeeecCCCccCCCCCh
Q 002061 469 FSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNI-PRSLSLLSSLNALNLSGNKLTGSIPD 547 (973)
Q Consensus 469 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~p~ 547 (973)
|+ .+|..|+.+++|+.|+|++|+|++ +| .++.+++|+.|+|++|+|++.. |..|..+++|+.|+|++|+|++.+|.
T Consensus 475 l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 475 LR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred cc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 87 667788888888888888888886 45 7788888888888888888766 78888888888888888888865553
Q ss_pred h---hhccc-CceEEc
Q 002061 548 N---LMKLK-LSSIDL 559 (973)
Q Consensus 548 ~---l~~l~-L~~l~l 559 (973)
. +..++ |+.||+
T Consensus 552 ~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 552 QERLAEMLPSVSSILT 567 (567)
T ss_dssp TTHHHHHCTTCSEEEC
T ss_pred HHHHHHHCcccCccCC
Confidence 2 12233 666654
No 370
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.75 E-value=2.8e-18 Score=173.95 Aligned_cols=155 Identities=16% Similarity=0.232 Sum_probs=116.3
Q ss_pred cccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCC
Q 002061 380 SYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNL 459 (973)
Q Consensus 380 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L 459 (973)
..+.+++|++|++++|.|+ .+| .+..+++|++|++++|.++.. +.+..+++|++|++++|++++..|..++.+++|
T Consensus 39 ~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 114 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATNY--NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSL 114 (197)
T ss_dssp BHHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSCC--GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTC
T ss_pred ChhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCcc--hhhhcCCCCCEEEeECCccCcccChhhcCCCCC
Confidence 4477889999999999998 555 688888888888888866543 356777888888888888877677778888888
Q ss_pred CEEEccCCcCCCCccccccccccCCEEEcCCcc-cccCCCccccccccccchhccccccccCCCccccccCCCCeeecCC
Q 002061 460 ERLILTNNNFSGKIPSALGALRQLSSLHLEENA-LTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSG 538 (973)
Q Consensus 460 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 538 (973)
++|+|++|++++..|..+..+++|++|+|++|+ ++ .+| .+..+++|+.|++++|++++ ++ .+..+++|+.|++++
T Consensus 115 ~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~ 190 (197)
T 4ezg_A 115 TLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFS 190 (197)
T ss_dssp CEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECB
T ss_pred CEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeC
Confidence 888888888877677777888888888888887 55 344 57777777777777777774 33 567777777777777
Q ss_pred CccC
Q 002061 539 NKLT 542 (973)
Q Consensus 539 N~l~ 542 (973)
|++.
T Consensus 191 N~i~ 194 (197)
T 4ezg_A 191 QTIG 194 (197)
T ss_dssp C---
T ss_pred cccC
Confidence 7765
No 371
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.75 E-value=7.2e-20 Score=215.53 Aligned_cols=190 Identities=18% Similarity=0.203 Sum_probs=158.2
Q ss_pred cccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccc-------------cccC
Q 002061 334 GRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNH-------------LSGK 400 (973)
Q Consensus 334 ~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~-------------l~~~ 400 (973)
..+++|+.|+|++|+|+ .+|..+..+.. |+.|++++|. +.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~------------------------L~~L~l~~n~~l~~l~~ll~~~~~~~~ 400 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKE------------------------LQELEPENKWCLLTIILLMRALDPLLY 400 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHH------------------------HHHHCTTCHHHHHHHHHHHHHHCTGGG
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHH------------------------HHHhccccchhhhhHHHHHHhcccccC
Confidence 56789999999999997 56666555544 4444443332 5567
Q ss_pred CCccccCCCCcceEe-ccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccc
Q 002061 401 IPDGLWALPNVGMLD-FGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGA 479 (973)
Q Consensus 401 ~p~~~~~l~~L~~L~-L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 479 (973)
+|..+..+++|+.|+ ++.|.+ .+|+.+.+++|.++.. |. ..|+.|+|++|+|++ +|. |+.
T Consensus 401 ~~~~l~~l~~L~~L~~l~~n~~-----------~~L~~l~l~~n~i~~l-~~-----~~L~~L~Ls~n~l~~-lp~-~~~ 461 (567)
T 1dce_A 401 EKETLQYFSTLKAVDPMRAAYL-----------DDLRSKFLLENSVLKM-EY-----ADVRVLHLAHKDLTV-LCH-LEQ 461 (567)
T ss_dssp HHHHHHHHHHHHHHCGGGHHHH-----------HHHHHHHHHHHHHHHH-HH-----TTCSEEECTTSCCSS-CCC-GGG
T ss_pred CHHHHHHHHhcccCcchhhccc-----------chhhhhhhhccccccc-Cc-----cCceEEEecCCCCCC-CcC-ccc
Confidence 888888899999998 777755 3577788888888742 21 259999999999996 676 999
Q ss_pred cccCCEEEcCCcccccCCCccccccccccchhccccccccCCCccccccCCCCeeecCCCccCCCC-Chhhhccc-CceE
Q 002061 480 LRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSI-PDNLMKLK-LSSI 557 (973)
Q Consensus 480 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~l~~l~-L~~l 557 (973)
+++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +| .|..+++|+.|+|++|+|++.+ |..+..++ |+.|
T Consensus 462 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L 538 (567)
T 1dce_A 462 LLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLL 538 (567)
T ss_dssp GTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEE
T ss_pred cccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEE
Confidence 999999999999999 789999999999999999999996 67 8999999999999999999877 99999986 9999
Q ss_pred EccCCccccccCc
Q 002061 558 DLSENQLSGSVPL 570 (973)
Q Consensus 558 ~ls~N~l~~~~p~ 570 (973)
+|++|++++.+|.
T Consensus 539 ~L~~N~l~~~~~~ 551 (567)
T 1dce_A 539 NLQGNSLCQEEGI 551 (567)
T ss_dssp ECTTSGGGGSSSC
T ss_pred EecCCcCCCCccH
Confidence 9999999998764
No 372
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=1.1e-18 Score=175.98 Aligned_cols=154 Identities=23% Similarity=0.392 Sum_probs=132.3
Q ss_pred CEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccc-cccccccCCEEEcCCcccccCCCccccccccccchhccc
Q 002061 436 SQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPS-ALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLAR 514 (973)
Q Consensus 436 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 514 (973)
+.+++++|+++ .+|..+.. +|++|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|.++++|+.|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 78899999997 66765543 899999999999977664 599999999999999999999999999999999999999
Q ss_pred cccccCCCccccccCCCCeeecCCCccCCCCChhhhccc-CceEEccCCccccccCcccc-cCCCCccccCCCCCccCcc
Q 002061 515 NSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLDFL-RMGGDGAFAGNEGLCLDQS 592 (973)
Q Consensus 515 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-L~~l~ls~N~l~~~~p~~~~-~~~~~~~~~~n~~lc~~~~ 592 (973)
|+|++..+..|..+++|++|+|++|+|++.+|..+..++ |+.|+|++|+|+|.++..|. .+-....+.++...|+.|.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~ 167 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPS 167 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSST
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCCh
Confidence 999999999999999999999999999999999998886 99999999999999996532 1111124556667787765
No 373
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=1.9e-18 Score=183.53 Aligned_cols=168 Identities=21% Similarity=0.288 Sum_probs=146.7
Q ss_pred ceEEEeecCCCCCccccccccCCccCcEeeCCCCcccCcCChhhhCCCCCcEEEecCCcccCCCCcccCCCCCCEEeccC
Q 002061 74 RVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSI 153 (973)
Q Consensus 74 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~ 153 (973)
.++.+++.++.+++.. .+..+++|++|++++|.++ .+| .++.+++|++|+|++|++++.++ ++.+++|++|+|++
T Consensus 20 ~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~L~~ 94 (263)
T 1xeu_A 20 NAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP-LKDLTKLEELSVNR 94 (263)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCEEECCS
T ss_pred HHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh-hccCCCCCEEECCC
Confidence 3566778888887543 6889999999999999998 466 79999999999999999999887 99999999999999
Q ss_pred ccCCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCC
Q 002061 154 NYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEF 233 (973)
Q Consensus 154 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 233 (973)
|.+++. |. +.. ++|++|++++|.++. + +.+..+++|++|+|++|++++. + .+..+++|++|+|++|+|++.
T Consensus 95 N~l~~l-~~-~~~-~~L~~L~L~~N~l~~--~-~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~- 165 (263)
T 1xeu_A 95 NRLKNL-NG-IPS-ACLSRLFLDNNELRD--T-DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT- 165 (263)
T ss_dssp SCCSCC-TT-CCC-SSCCEEECCSSCCSB--S-GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC-
T ss_pred CccCCc-Cc-ccc-CcccEEEccCCccCC--C-hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch-
Confidence 999864 33 233 999999999999975 3 4699999999999999999964 4 799999999999999999966
Q ss_pred chhhhccccccEEEeeccccCCc
Q 002061 234 PRSIRKLQKLWKIELYANNLTGE 256 (973)
Q Consensus 234 ~~~l~~l~~L~~L~L~~N~l~~~ 256 (973)
..+..+++|++|++++|.+++.
T Consensus 166 -~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 166 -GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -TTSTTCCCCCEEEEEEEEEECC
T ss_pred -HHhccCCCCCEEeCCCCcccCC
Confidence 7799999999999999999955
No 374
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.73 E-value=1.2e-18 Score=211.82 Aligned_cols=154 Identities=21% Similarity=0.259 Sum_probs=115.9
Q ss_pred CccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhc
Q 002061 376 EVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGR 455 (973)
Q Consensus 376 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~ 455 (973)
..|..+..++.|+.|+|++|.|. .+|..++.+++|++|+|++|+|+ .+|..|+.+++|++|+|++|+|+ .+|..|++
T Consensus 215 ~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 291 (727)
T 4b8c_D 215 MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGS 291 (727)
T ss_dssp -------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGG
T ss_pred cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcC
Confidence 55677888899999999999998 67777778999999999999988 55677788889999999999998 67888888
Q ss_pred CCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCcccccccc-ccchhccccccccCCCccccccCCCCee
Q 002061 456 LTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCAR-IVDLNLARNSLSGNIPRSLSLLSSLNAL 534 (973)
Q Consensus 456 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 534 (973)
+++|++|+|++|.|+ .+|..|+.+++|+.|+|++|+|++.+|..+..+.. +..|+|++|.+++.+|.. |+.|
T Consensus 292 l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l 364 (727)
T 4b8c_D 292 CFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFI 364 (727)
T ss_dssp GTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----------
T ss_pred CCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------ccee
Confidence 999999999999887 67777888999999999999998888888766533 245788899888877764 4556
Q ss_pred ecCCC
Q 002061 535 NLSGN 539 (973)
Q Consensus 535 ~L~~N 539 (973)
++++|
T Consensus 365 ~l~~n 369 (727)
T 4b8c_D 365 EINTD 369 (727)
T ss_dssp -----
T ss_pred Eeecc
Confidence 67666
No 375
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.73 E-value=7.6e-18 Score=170.80 Aligned_cols=152 Identities=18% Similarity=0.237 Sum_probs=73.5
Q ss_pred hCCCCCcEEEecCCcccCCCCcccCCCCCCEEeccCccCCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCE
Q 002061 118 SNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTY 197 (973)
Q Consensus 118 ~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~ 197 (973)
+.+++|++|++++|.+...+ .+..+++|++|++++|.++. +..+..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~l~~n~~~~---------------------------~~~l~~l~~L~~ 92 (197)
T 4ezg_A 41 AQMNSLTYITLANINVTDLT-GIEYAHNIKDLTINNIHATN---------------------------YNPISGLSNLER 92 (197)
T ss_dssp HHHHTCCEEEEESSCCSCCT-TGGGCTTCSEEEEESCCCSC---------------------------CGGGTTCTTCCE
T ss_pred hhcCCccEEeccCCCccChH-HHhcCCCCCEEEccCCCCCc---------------------------chhhhcCCCCCE
Confidence 45556666666666665433 45555666666666654431 123444444444
Q ss_pred EEcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccc-cCCcCCccccccccccEEEeeccc
Q 002061 198 LFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANN-LTGELPAELGNLTLLQEFDISSNQ 276 (973)
Q Consensus 198 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~-l~~~~~~~l~~l~~L~~L~Ls~N~ 276 (973)
|++++|++++..+..++.+++|++|+|++|++++..|..++.+++|++|+|++|. ++ .+| .+..+++|++|++++|+
T Consensus 93 L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~ 170 (197)
T 4ezg_A 93 LRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDG 170 (197)
T ss_dssp EEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBC
T ss_pred EEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCC
Confidence 4444444444344444455555555555555544444444445555555555554 33 222 34445555555555555
Q ss_pred cccccCCccCCCCCccEEEcccCCC
Q 002061 277 MYGKLPEEIGNLKNLTVFQCFKNNF 301 (973)
Q Consensus 277 l~~~~p~~~~~l~~L~~L~l~~N~l 301 (973)
+++ ++ .+..+++|+.|++++|+|
T Consensus 171 i~~-~~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 171 VHD-YR-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp CCC-CT-TGGGCSSCCEEEECBC--
T ss_pred CcC-hH-HhccCCCCCEEEeeCccc
Confidence 442 22 344444444444444444
No 376
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.71 E-value=2.8e-18 Score=189.16 Aligned_cols=287 Identities=12% Similarity=0.048 Sum_probs=147.0
Q ss_pred CCCCCEEEcccCCCCCCCChhhhc-cCCCCeeeccccccc--CCCchhhhccccccEEEeeccccCCcCCccccc-----
Q 002061 192 LKNLTYLFLAHCNLRGRIPESISE-LRELGTLDICRNKIS--GEFPRSIRKLQKLWKIELYANNLTGELPAELGN----- 263 (973)
Q Consensus 192 l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~N~l~--~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~----- 263 (973)
+.+++.|.++++ +...-...+.. +++|++|||++|+|. ...... ++.++.+.+..|.|. +..|.+
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~---~~~~~~~~~~~~~I~---~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGT---YPNGKFYIYMANFVP---AYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSS---SGGGCCEEECTTEEC---TTTTEEEETTE
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCcccc---ccccccccccccccC---HHHhccccccc
Confidence 456777777654 22111123333 566777777777766 211111 222444455555332 234555
Q ss_pred ---cccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCcc----CCCCCcccccc
Q 002061 264 ---LTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRF----SGPFPENLGRY 336 (973)
Q Consensus 264 ---l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l----~~~~~~~l~~l 336 (973)
+++|+.|+|.+ .++...+..|.++++|+.+++.+|.+....+.+|.++.++..+.+..+.. .......|..+
T Consensus 97 ~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~ 175 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEG 175 (329)
T ss_dssp EEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEES
T ss_pred ccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccc
Confidence 66666666666 56555555566666666666666666655555666665555555444211 11222333334
Q ss_pred cccc-ccccccccccccCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCccccCCCCcceEe
Q 002061 337 TALT-DVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLD 415 (973)
Q Consensus 337 ~~L~-~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 415 (973)
..|+ .+.+.... .++..+. ..-....++..+.+.++-.. .....+.
T Consensus 176 ~~L~~~i~~~~~~---~l~~~~~--------------------~~~~~~~~~~~l~~~~~l~~-~~~~~l~--------- 222 (329)
T 3sb4_A 176 EPLETTIQVGAMG---KLEDEIM--------------------KAGLQPRDINFLTIEGKLDN-ADFKLIR--------- 222 (329)
T ss_dssp CCCEEEEEECTTC---CHHHHHH--------------------HTTCCGGGCSEEEEEECCCH-HHHHHHH---------
T ss_pred cccceeEEecCCC---cHHHHHh--------------------hcccCccccceEEEeeeecH-HHHHHHH---------
Confidence 4443 22222111 1111100 00012233444444433111 0000000
Q ss_pred ccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCC-EEEcCCcccc
Q 002061 416 FGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLS-SLHLEENALT 494 (973)
Q Consensus 416 L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~ 494 (973)
..+++|+.|+|++|+++.+.+..|.++++|+.|+|.+| ++.+.+.+|.++++|+ .|++.+ .++
T Consensus 223 --------------~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~ 286 (329)
T 3sb4_A 223 --------------DYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVT 286 (329)
T ss_dssp --------------HHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCC
T ss_pred --------------HhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cce
Confidence 12455666666666666555556666666666666666 5545555666666666 666666 565
Q ss_pred cCCCccccccccccchhccccccccCCCccccccCCCCeee
Q 002061 495 GSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALN 535 (973)
Q Consensus 495 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 535 (973)
.+.+.+|.+|++|+.+++++|+++...+.+|.++++|+.++
T Consensus 287 ~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 287 AIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 56666677777777777777777666666677777777665
No 377
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.71 E-value=5.7e-18 Score=186.75 Aligned_cols=292 Identities=10% Similarity=0.033 Sum_probs=190.6
Q ss_pred Ccccccccc--ccccceEEccCCcCCCCCCcccccC-CCCCCEEEcccCCCC--CCCChhhhccCCCCeeecccccccCC
Q 002061 158 GRFPRWVVN--LTQLVSLSIGDNVYDEAEIPESIGN-LKNLTYLFLAHCNLR--GRIPESISELRELGTLDICRNKISGE 232 (973)
Q Consensus 158 ~~~~~~~~~--l~~L~~L~l~~n~l~~~~ip~~~~~-l~~L~~L~L~~n~l~--~~~~~~~~~l~~L~~L~L~~N~l~~~ 232 (973)
|.++..+.. +.+|++|.++++- ....+ ..+.. +++|++|+|++|++. ...+. .++.+..+.+..|.|.
T Consensus 13 g~l~~~l~~~~~~~l~~L~l~g~i-~~~~~-~~l~~~l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~I~-- 85 (329)
T 3sb4_A 13 GTLISMMTEEEANSITHLTLTGKL-NAEDF-RHLRDEFPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANFVP-- 85 (329)
T ss_dssp TCGGGGSCHHHHHHCSEEEEEEEE-CHHHH-HHHHHSCTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTEEC--
T ss_pred CcHHhhccchhhCceeEEEEeccc-cHHHH-HHHHHhhccCeEEecCcceeEEecCccc---cccccccccccccccC--
Confidence 344444543 7889999998752 21122 23434 889999999999998 22222 2233556666666543
Q ss_pred Cchhhhc--------cccccEEEeeccccCCcCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCC----
Q 002061 233 FPRSIRK--------LQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNN---- 300 (973)
Q Consensus 233 ~~~~l~~--------l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~---- 300 (973)
+.+|.+ +++|+.|+|.+ .++...+..|.++++|+.|+++.|.+....+..|.++.++..+....+.
T Consensus 86 -~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~ 163 (329)
T 3sb4_A 86 -AYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRF 163 (329)
T ss_dssp -TTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHT
T ss_pred -HHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhc
Confidence 456777 99999999999 8887777889999999999999999987888889998888888776632
Q ss_pred CCCCCCCCcCCcccce-eeeccCCccCCCCCccc----cccccccccccccccccccCChhhhhhhhHHHHHhhhccCCC
Q 002061 301 FSGEFPSGFGDMRKLF-AFSIYGNRFSGPFPENL----GRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSG 375 (973)
Q Consensus 301 l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~~~~l----~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~ 375 (973)
........|.++..|+ .+.+.... .++..+ ....+++.+.+.++-.. . .+ .
T Consensus 164 ~~~i~~~~f~~~~~L~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~-~---~~---~-------------- 219 (329)
T 3sb4_A 164 KNRWEHFAFIEGEPLETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDN-A---DF---K-------------- 219 (329)
T ss_dssp STTTTTSCEEESCCCEEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCH-H---HH---H--------------
T ss_pred cccccccccccccccceeEEecCCC---cHHHHHhhcccCccccceEEEeeeecH-H---HH---H--------------
Confidence 2333445677777777 45443321 112111 12344455555443211 0 00 0
Q ss_pred CccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCC-EEEcccCCCCCCCChhhh
Q 002061 376 EVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLS-QLVLQNNRFSGELPSELG 454 (973)
Q Consensus 376 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~-~L~L~~N~l~~~~p~~~~ 454 (973)
.....+++|++|+|++|+++.+.+..|.++++|+.|+|.+| ++.+....|.++++|+ .+++.+ +++.+.+.+|.
T Consensus 220 ---~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~ 294 (329)
T 3sb4_A 220 ---LIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFM 294 (329)
T ss_dssp ---HHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTT
T ss_pred ---HHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhh
Confidence 00113688999999999998777777877877777777776 6666666677777776 777666 55555556666
Q ss_pred cCCCCCEEEccCCcCCCCccccccccccCCEEE
Q 002061 455 RLTNLERLILTNNNFSGKIPSALGALRQLSSLH 487 (973)
Q Consensus 455 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 487 (973)
++++|+.|++++|+++.+.+.+|.++++|+.|+
T Consensus 295 ~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 295 GCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp TCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred CCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 666666666666666655555666666666655
No 378
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.71 E-value=1.8e-17 Score=167.08 Aligned_cols=132 Identities=23% Similarity=0.368 Sum_probs=98.2
Q ss_pred CEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhcccc
Q 002061 436 SQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARN 515 (973)
Q Consensus 436 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 515 (973)
+.+++++|+++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 45666667666 4454332 46777777777776 56677777777777777777777777777777778888888888
Q ss_pred ccccCCCccccccCCCCeeecCCCccCCCCChhhhccc-CceEEccCCccccccCcc
Q 002061 516 SLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLD 571 (973)
Q Consensus 516 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-L~~l~ls~N~l~~~~p~~ 571 (973)
+|++..|..|..+++|+.|+|++|+|++..+..+..++ |+.|+|++|+|.|.|...
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l~ 145 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQ 145 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGGH
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcCH
Confidence 88777777788888888888888888865555676665 888888899998888764
No 379
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.70 E-value=1.7e-17 Score=175.71 Aligned_cols=136 Identities=17% Similarity=0.204 Sum_probs=104.7
Q ss_pred CcccCcccccCceEEEEEEecCCCcE--EEEEeeeccc-c-------------------------HHHHHHHHHHHHhcC
Q 002061 678 LEEDNLIGSGGTGKVYRLDLKKNAGT--VAVKQLWKGD-G-------------------------VKVFAAEMEILGKIR 729 (973)
Q Consensus 678 ~~~~~~lG~G~~g~V~~a~~~~~~~~--vavK~~~~~~-~-------------------------~~~~~~E~~~l~~l~ 729 (973)
|++.+.||+|+||.||+|.+..+|+. ||||+++... . ...+.+|+++++++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999999666888 9999864321 0 125788999999998
Q ss_pred CCce--eeEEEEEEeCCeeEEEEEccCC-C----chHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEe
Q 002061 730 HRNI--LKLYACLLKGGSSFLVLEYMPN-G----NLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIH 802 (973)
Q Consensus 730 hpni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH 802 (973)
|+++ ..++++ ...++||||+.+ | +|.++... .++.....++.|++.|++|||. +.+|+|
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~--~~givH 194 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQ--EAELVH 194 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHH--TSCEEC
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHH--HCCEEe
Confidence 8764 333332 356899999942 4 66655432 1233556889999999999994 459999
Q ss_pred cCCCCCCeeecCCCCeEEecccCcccc
Q 002061 803 RDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 803 ~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||||+|||++. .++|+|||+|...
T Consensus 195 rDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 195 ADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SSCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCCHHHEEEcC--cEEEEECcccccC
Confidence 999999999998 9999999999754
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.68 E-value=1.5e-16 Score=156.79 Aligned_cols=135 Identities=21% Similarity=0.232 Sum_probs=101.6
Q ss_pred CCccCcEeeCCCCccc-CcCChhhhCCCCCcEEEecCCcccCCCCcccCCCCCCEEeccCccCCCccccccccccccceE
Q 002061 95 ALQSLTVLSLPFNVLS-GKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSL 173 (973)
Q Consensus 95 ~l~~L~~L~Ls~n~l~-~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 173 (973)
..++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. +.++.+++|++|+|++|.+++.+|..+..+++|++|
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 3477888888888887 77888888888888899888888877 778888888888888888887677777777777777
Q ss_pred EccCCcCCCCCCcccccCCCCCCEEEcccCCCCCCCC---hhhhccCCCCeeeccccccc
Q 002061 174 SIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIP---ESISELRELGTLDICRNKIS 230 (973)
Q Consensus 174 ~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~~---~~~~~l~~L~~L~L~~N~l~ 230 (973)
++++|.++....+..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 7777777643333566777777777777777775444 36666777777777776665
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=2.5e-16 Score=155.20 Aligned_cols=133 Identities=20% Similarity=0.163 Sum_probs=108.7
Q ss_pred ccccceEeccccccc-cCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEE
Q 002061 384 CKTIQRLRISDNHLS-GKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERL 462 (973)
Q Consensus 384 l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 462 (973)
.++|++|+|++|+++ +.+|..+..+++|+.|++++|++++. ..+..+++|++|+|++|++++.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 378999999999998 67888888899999999999998876 677888889999999998887788888888888888
Q ss_pred EccCCcCCCCc-cccccccccCCEEEcCCcccccCCC---ccccccccccchhccccccc
Q 002061 463 ILTNNNFSGKI-PSALGALRQLSSLHLEENALTGSIP---NEMGDCARIVDLNLARNSLS 518 (973)
Q Consensus 463 ~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~ 518 (973)
+|++|++++.. +..+..+++|++|++++|++++..+ ..+..+++|+.|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 88888888543 2678888888888888888886555 46777777777777777776
No 382
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.66 E-value=3.7e-16 Score=157.35 Aligned_cols=111 Identities=26% Similarity=0.316 Sum_probs=101.4
Q ss_pred CCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhc
Q 002061 433 TSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNL 512 (973)
Q Consensus 433 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 512 (973)
++|++|+|++|+|+ .+|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|+.|+|
T Consensus 31 ~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 57889999999998 67789999999999999999999888889999999999999999999988899999999999999
Q ss_pred cccccccCCCccccccCCCCeeecCCCccCCC
Q 002061 513 ARNSLSGNIPRSLSLLSSLNALNLSGNKLTGS 544 (973)
Q Consensus 513 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 544 (973)
++|+|++..+..|..+++|+.|+|++|++...
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 110 HGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 99999977777899999999999999999853
No 383
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=2e-16 Score=152.35 Aligned_cols=130 Identities=22% Similarity=0.242 Sum_probs=97.8
Q ss_pred CCccCcEeeCCCCccc-CcCChhhhCCCCCcEEEecCCcccCCCCcccCCCCCCEEeccCccCCCccccccccccccceE
Q 002061 95 ALQSLTVLSLPFNVLS-GKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSL 173 (973)
Q Consensus 95 ~l~~L~~L~Ls~n~l~-~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 173 (973)
..++|++|++++|.++ +.+|..+..+++|++|+|++|.+++. +.++.+++|++|+|++|.+++.+|..+..+++|++|
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 3477889999999888 78888888889999999999988877 678888888999998888887677777777777777
Q ss_pred EccCCcCCCCCCcccccCCCCCCEEEcccCCCCCCCC---hhhhccCCCCeeecc
Q 002061 174 SIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIP---ESISELRELGTLDIC 225 (973)
Q Consensus 174 ~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~~---~~~~~l~~L~~L~L~ 225 (973)
++++|.++....+..++.+++|++|++++|++++..+ ..+..+++|++|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 7777777543333566667777777777777765544 456666666666664
No 384
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.64 E-value=6.3e-16 Score=153.66 Aligned_cols=131 Identities=21% Similarity=0.279 Sum_probs=68.5
Q ss_pred CEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhcccc
Q 002061 436 SQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARN 515 (973)
Q Consensus 436 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 515 (973)
+.+++++|+++ .+|..+ .++|+.|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|
T Consensus 10 ~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 34444455444 233222 234555555555555444444555555555555555555444444555555555555555
Q ss_pred ccccCCCccccccCCCCeeecCCCccCCCCChhhhccc-CceEEccCCccccccC
Q 002061 516 SLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVP 569 (973)
Q Consensus 516 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-L~~l~ls~N~l~~~~p 569 (973)
+|++..+..|..+++|+.|+|++|++++..+..+..++ |+.|+|++|+|.|.+|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 55554444555555666666666666544443344443 5666666666666555
No 385
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.64 E-value=5.2e-16 Score=149.45 Aligned_cols=129 Identities=21% Similarity=0.184 Sum_probs=97.7
Q ss_pred CccccceEeccccccc-cCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCE
Q 002061 383 DCKTIQRLRISDNHLS-GKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLER 461 (973)
Q Consensus 383 ~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 461 (973)
..++|++|++++|.++ +.+|..+..+++|+.|++++|++++. ..+..+++|++|+|++|++++.+|..+..+++|++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3478999999999998 77888888888888888888888876 66777788888888888887667777777788888
Q ss_pred EEccCCcCCCC-ccccccccccCCEEEcCCcccccCCC---ccccccccccchhcc
Q 002061 462 LILTNNNFSGK-IPSALGALRQLSSLHLEENALTGSIP---NEMGDCARIVDLNLA 513 (973)
Q Consensus 462 L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls 513 (973)
|++++|++++. .+..+..+++|++|++++|++++..+ ..+..+++|+.|+++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 88888887753 33667777777777777777776554 456666666666655
No 386
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=1.1e-15 Score=151.88 Aligned_cols=131 Identities=22% Similarity=0.271 Sum_probs=103.2
Q ss_pred eEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcc
Q 002061 413 MLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENA 492 (973)
Q Consensus 413 ~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 492 (973)
.+++++|+++..+.. ..++|++|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+
T Consensus 11 ~l~~~~~~l~~~p~~---~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 87 (177)
T 2o6r_A 11 EIRCNSKGLTSVPTG---IPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENK 87 (177)
T ss_dssp EEECCSSCCSSCCTT---CCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEecCCCCccCCCC---CCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCC
Confidence 344444444433321 23578888888888887666777888888888888888887777778888889999999998
Q ss_pred cccCCCccccccccccchhccccccccCCCccccccCCCCeeecCCCccCCCCC
Q 002061 493 LTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIP 546 (973)
Q Consensus 493 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 546 (973)
|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++++..|
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 88 LQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 888777788888999999999999987777777889999999999999997666
No 387
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.60 E-value=9.2e-15 Score=164.41 Aligned_cols=87 Identities=13% Similarity=0.175 Sum_probs=36.4
Q ss_pred ChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhccccccccCCCccccccC
Q 002061 450 PSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLS 529 (973)
Q Consensus 450 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 529 (973)
+..|.++++|+.++|. |.++.+...+|.++++|+.++|..| ++.+.+.+|.++ +|+.+++++|.+....+..|.+++
T Consensus 293 ~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~ 369 (401)
T 4fdw_A 293 PYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFP 369 (401)
T ss_dssp TTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSC
T ss_pred HHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCC
Confidence 3344444444444444 2233333344444444444444332 333334444444 444444444444433334444332
Q ss_pred -CCCeeecCCC
Q 002061 530 -SLNALNLSGN 539 (973)
Q Consensus 530 -~L~~L~L~~N 539 (973)
+++.|++..|
T Consensus 370 ~~l~~l~vp~~ 380 (401)
T 4fdw_A 370 DDITVIRVPAE 380 (401)
T ss_dssp TTCCEEEECGG
T ss_pred CCccEEEeCHH
Confidence 3444444333
No 388
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.59 E-value=1.5e-14 Score=162.63 Aligned_cols=263 Identities=8% Similarity=0.102 Sum_probs=185.0
Q ss_pred ccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCCcccccccccccccc
Q 002061 265 TLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDI 344 (973)
Q Consensus 265 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L 344 (973)
..++.+.+.. .++......|.+. +|+.+.+..| ++.....+|.+. +|+.+.+.. .++...+.+|..+.+|+.+++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 4445555443 2333444445543 5666665544 544444555553 466666654 455455566777777777777
Q ss_pred ccccccccCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCC
Q 002061 345 SENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGG 424 (973)
Q Consensus 345 s~N~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 424 (973)
++|+++ .+|. ..|. +.+|+.+.|..+ ++.+...+|.++++|+.+++..| ++.+
T Consensus 188 ~~n~l~-~I~~-----------------------~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I 240 (401)
T 4fdw_A 188 SKTKIT-KLPA-----------------------STFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTI 240 (401)
T ss_dssp TTSCCS-EECT-----------------------TTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEE
T ss_pred CCCcce-Eech-----------------------hhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCc
Confidence 777666 2221 1233 467777888744 66566777888888888888764 6666
Q ss_pred CCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCC-----CCccccccccccCCEEEcCCcccccCCCc
Q 002061 425 ISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFS-----GKIPSALGALRQLSSLHLEENALTGSIPN 499 (973)
Q Consensus 425 ~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 499 (973)
....|.. .+|+.+.| .|.++...+.+|.++++|+.+++.+|.+. .+.+.+|.++++|+.++|. |.++.+...
T Consensus 241 ~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~ 317 (401)
T 4fdw_A 241 GQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQG 317 (401)
T ss_dssp CTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTT
T ss_pred ccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhh
Confidence 6677777 78999999 45677677888999999999999988775 4567789999999999999 458878889
Q ss_pred cccccccccchhccccccccCCCccccccCCCCeeecCCCccCCCCChhhhccc--CceEEccCCcc
Q 002061 500 EMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK--LSSIDLSENQL 564 (973)
Q Consensus 500 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~--L~~l~ls~N~l 564 (973)
+|.++.+|+.++|..| ++...+.+|.++ +|+.+++++|.+....+..|..++ +..|++-.|.+
T Consensus 318 aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 318 LLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp TTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred hhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 9999999999999665 776778899999 999999999998865556666653 67777765544
No 389
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.55 E-value=7.7e-15 Score=145.59 Aligned_cols=134 Identities=22% Similarity=0.277 Sum_probs=84.5
Q ss_pred cccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCC
Q 002061 380 SYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNL 459 (973)
Q Consensus 380 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L 459 (973)
.+.++.+|++|+|++|+++. +|......++|+.|++++|++++. +.+..+++|++|+|++|+|++..+..+..+++|
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hcCCcCCceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 45667788888888888874 454332233777777777777764 456666777777777777765544555667777
Q ss_pred CEEEccCCcCCCCccc--cccccccCCEEEcCCcccccCCCc----cccccccccchhccccccc
Q 002061 460 ERLILTNNNFSGKIPS--ALGALRQLSSLHLEENALTGSIPN----EMGDCARIVDLNLARNSLS 518 (973)
Q Consensus 460 ~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~ 518 (973)
++|+|++|+|+ .+|. .+..+++|+.|++++|.++. +|. .+..+++|+.||+++|.+.
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 77777777775 3444 56666666666666666653 333 2555555555555555543
No 390
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.55 E-value=1e-15 Score=167.57 Aligned_cols=136 Identities=15% Similarity=0.118 Sum_probs=98.4
Q ss_pred CcccCcccccCceEEEEEEecCCCcEEEEEeeeccc----------------cHH--------HHHHHHHHHHhcCCCce
Q 002061 678 LEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----------------GVK--------VFAAEMEILGKIRHRNI 733 (973)
Q Consensus 678 ~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----------------~~~--------~~~~E~~~l~~l~hpni 733 (973)
|++...||+|+||.||+|.+.. |+.||||+++... ... ...+|...+.++.+.++
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~-G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEK-GKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTT-CCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEecCEeeeCCceEEEEEECCC-CCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 8899999999999999999864 8999999864310 001 12356777777755544
Q ss_pred eeEEEEEEeCCeeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeec
Q 002061 734 LKLYACLLKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD 813 (973)
Q Consensus 734 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~ 813 (973)
....-+... ..++||||++|++|.++.. . .....++.|++.+|.++| +.+||||||||.|||++
T Consensus 176 ~vp~p~~~~--~~~LVME~i~G~~L~~l~~---------~--~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~ 239 (397)
T 4gyi_A 176 PVPEPIAQS--RHTIVMSLVDALPMRQVSS---------V--PDPASLYADLIALILRLA---KHGLIHGDFNEFNILIR 239 (397)
T ss_dssp SCCCEEEEE--TTEEEEECCSCEEGGGCCC---------C--SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE
T ss_pred CCCeeeecc--CceEEEEecCCccHhhhcc---------c--HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEe
Confidence 322111111 2479999999988854321 1 123467899999999999 77999999999999998
Q ss_pred CCC----------CeEEecccCccccc
Q 002061 814 EDY----------EPKIADFGVAKIAE 830 (973)
Q Consensus 814 ~~~----------~~kl~Dfgl~~~~~ 830 (973)
+++ .+.|.||+-+....
T Consensus 240 ~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 240 EEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCCCcccccccccceEEEEeCCcccCC
Confidence 876 38999999876543
No 391
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.54 E-value=6.1e-14 Score=158.51 Aligned_cols=303 Identities=10% Similarity=0.023 Sum_probs=146.0
Q ss_pred ccCCCCCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccccCCcCCcccccccccc
Q 002061 189 IGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQ 268 (973)
Q Consensus 189 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~ 268 (973)
|.++++|+.++|.++ ++.....+|..+++|+.+.+..+ +......+|.....+..... +.+.......|.++++|+
T Consensus 90 F~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~~~~~--~~~~~i~~~aF~~c~~L~ 165 (394)
T 4fs7_A 90 FENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFKEITIP--EGVTVIGDEAFATCESLE 165 (394)
T ss_dssp TTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCSEEECC--TTCCEECTTTTTTCTTCC
T ss_pred hhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeecccccccccC--ccccccchhhhcccCCCc
Confidence 344444444444322 33233344555555555444332 22223333443332221111 111212234555666666
Q ss_pred EEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCCcccccccccccccccccc
Q 002061 269 EFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQ 348 (973)
Q Consensus 269 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~ 348 (973)
.+.+..+.. ......|.++.+|+.+.+..| ++.....+|.++..|+.+.+..+... +.+.......|+.+.+..+.
T Consensus 166 ~i~l~~~~~-~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~~ 241 (394)
T 4fs7_A 166 YVSLPDSME-TLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDSF 241 (394)
T ss_dssp EEECCTTCC-EECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTTC
T ss_pred EEecCCccc-eeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCCc
Confidence 666654432 234444555555665555443 33333445555555555554443322 11122222334444332211
Q ss_pred ccccCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCC
Q 002061 349 FSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPL 428 (973)
Q Consensus 349 l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 428 (973)
- ......|..+..|+.+.+..+... .....|.....++.+.+..+.+ ....
T Consensus 242 ~-------------------------~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~~ 292 (394)
T 4fs7_A 242 T-------------------------ELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV---PEKT 292 (394)
T ss_dssp C-------------------------EECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE---CTTT
T ss_pred e-------------------------ecccccccccccceeEEcCCCcce-eeccccccccccceeccCceee---cccc
Confidence 1 112234556666666666665443 4555566666666666555432 2334
Q ss_pred CCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCcccccccccc
Q 002061 429 IGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIV 508 (973)
Q Consensus 429 ~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 508 (973)
|....+|+.+.+.++ ++.+...+|.++.+|+.++|.++ ++.+-..+|.++.+|+.+++..| ++.+...+|.++.+|+
T Consensus 293 F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~ 369 (394)
T 4fs7_A 293 FYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLK 369 (394)
T ss_dssp TTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCC
T ss_pred ccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCC
Confidence 555666666666543 44444556666666666666533 44344556666666666666555 5545556666666666
Q ss_pred chhccccccccCCCccccccCCCCe
Q 002061 509 DLNLARNSLSGNIPRSLSLLSSLNA 533 (973)
Q Consensus 509 ~L~Ls~N~l~~~~~~~~~~l~~L~~ 533 (973)
.+++..+ ++ .+...|.++++|+.
T Consensus 370 ~i~lp~~-~~-~~~~~F~~c~~L~~ 392 (394)
T 4fs7_A 370 KVELPKR-LE-QYRYDFEDTTKFKW 392 (394)
T ss_dssp EEEEEGG-GG-GGGGGBCTTCEEEE
T ss_pred EEEECCC-CE-EhhheecCCCCCcE
Confidence 6666544 22 23345555555554
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.54 E-value=1.4e-16 Score=161.54 Aligned_cols=86 Identities=23% Similarity=0.226 Sum_probs=49.6
Q ss_pred ccCCccCcEeeCCCCcccCcCCh------hhhCCCCCcEEEecCCcccCCCCcccCCCCCCEEeccCccCCCcccccccc
Q 002061 93 ISALQSLTVLSLPFNVLSGKLPL------ELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVN 166 (973)
Q Consensus 93 l~~l~~L~~L~Ls~n~l~~~~p~------~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~ 166 (973)
+.....++.++++.+.++|.+|. .++.+++|++|+|++|.+++.+ .+..+++|++|++++|.++ .+|..+..
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~ 91 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKIS-SLSGMENLRILSLGRNLIK-KIENLDAV 91 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESCCC-CHHHHTTCCEEEEEEEEEC-SCSSHHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcccc-ccccCCCCCEEECCCCCcc-cccchhhc
Confidence 34455666666666666665554 6666666666666666666644 5666666666666666665 33444444
Q ss_pred ccccceEEccCCcC
Q 002061 167 LTQLVSLSIGDNVY 180 (973)
Q Consensus 167 l~~L~~L~l~~n~l 180 (973)
+++|++|++++|.+
T Consensus 92 ~~~L~~L~L~~N~l 105 (198)
T 1ds9_A 92 ADTLEELWISYNQI 105 (198)
T ss_dssp HHHCSEEEEEEEEC
T ss_pred CCcCCEEECcCCcC
Confidence 44444444444444
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.53 E-value=1.4e-14 Score=143.68 Aligned_cols=133 Identities=17% Similarity=0.183 Sum_probs=86.5
Q ss_pred cccCCccCcEeeCCCCcccCcCChhhhCCC-CCcEEEecCCcccCCCCcccCCCCCCEEeccCccCCCcccccccccccc
Q 002061 92 SISALQSLTVLSLPFNVLSGKLPLELSNCS-NLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQL 170 (973)
Q Consensus 92 ~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 170 (973)
.+..+.+|++|+|++|+++ .+|. +..+. +|++|+|++|.+++. +.++.+++|++|+|++|.+++..+..+..+++|
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 4556777788888888777 3454 44444 788888888877765 567777777777777777775444445666666
Q ss_pred ceEEccCCcCCCCCCcc--cccCCCCCCEEEcccCCCCCCCChh----hhccCCCCeeeccccccc
Q 002061 171 VSLSIGDNVYDEAEIPE--SIGNLKNLTYLFLAHCNLRGRIPES----ISELRELGTLDICRNKIS 230 (973)
Q Consensus 171 ~~L~l~~n~l~~~~ip~--~~~~l~~L~~L~L~~n~l~~~~~~~----~~~l~~L~~L~L~~N~l~ 230 (973)
++|++++|.+. .+|. .+..+++|++|++++|.++ .+|.. +..+++|++||+++|.+.
T Consensus 91 ~~L~L~~N~i~--~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLV--ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCC--CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCC--cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 66666666664 3444 5666666666666666665 33432 566666666666666554
No 394
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.52 E-value=3.9e-16 Score=158.29 Aligned_cols=136 Identities=22% Similarity=0.279 Sum_probs=72.1
Q ss_pred CCCCCCEEeccCccCCCcccc------ccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccCCCCCCCChhhhc
Q 002061 142 ALKNLEIFDLSINYFTGRFPR------WVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISE 215 (973)
Q Consensus 142 ~l~~L~~L~Ls~n~l~~~~~~------~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 215 (973)
...+++.++++.+.+++..|. .+..+++|++|++++|.+.. +| .+.++++|++|++++|+++ .+|..+..
T Consensus 16 ~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~--l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~ 91 (198)
T 1ds9_A 16 ERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK--IS-SLSGMENLRILSLGRNLIK-KIENLDAV 91 (198)
T ss_dssp HTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC--CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHH
T ss_pred hcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc--cc-ccccCCCCCEEECCCCCcc-cccchhhc
Confidence 344455555555555544433 45555555555555555442 34 5555555666666666555 44555555
Q ss_pred cCCCCeeecccccccCCCchhhhccccccEEEeeccccCCcCC-ccccccccccEEEeeccccccccCC
Q 002061 216 LRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELP-AELGNLTLLQEFDISSNQMYGKLPE 283 (973)
Q Consensus 216 l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~Ls~N~l~~~~p~ 283 (973)
+++|++|+|++|++++ +| .+..+++|++|+|++|++++..+ ..+..+++|++|++++|.+.+..|.
T Consensus 92 ~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 92 ADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp HHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 5566666666666653 33 45555666666666666553221 3455556666666666665544443
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.50 E-value=3.6e-14 Score=139.59 Aligned_cols=107 Identities=21% Similarity=0.262 Sum_probs=66.2
Q ss_pred CCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhccc
Q 002061 435 LSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLAR 514 (973)
Q Consensus 435 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 514 (973)
.+.+++++|+++ .+|..+ .++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|.++++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 456677777766 345444 25666666666666666666666666666666666666655555566666666666666
Q ss_pred cccccCCCccccccCCCCeeecCCCccCCC
Q 002061 515 NSLSGNIPRSLSLLSSLNALNLSGNKLTGS 544 (973)
Q Consensus 515 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 544 (973)
|+|++..+..|..+++|+.|+|++|+++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 666655555566666666666666666543
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.48 E-value=7e-14 Score=137.54 Aligned_cols=109 Identities=20% Similarity=0.249 Sum_probs=92.3
Q ss_pred CCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhccccccccCCCccccccCCCCeeecC
Q 002061 458 NLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLS 537 (973)
Q Consensus 458 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 537 (973)
..+.|++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 3578899999998 4666553 788999999999998888889999999999999999997777788889999999999
Q ss_pred CCccCCCCChhhhccc-CceEEccCCccccccC
Q 002061 538 GNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVP 569 (973)
Q Consensus 538 ~N~l~~~~p~~l~~l~-L~~l~ls~N~l~~~~p 569 (973)
+|+|++..|..+..++ |+.|+|++|+|+|.++
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9999976666777775 8999999999998887
No 397
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.48 E-value=4.1e-13 Score=151.71 Aligned_cols=310 Identities=10% Similarity=0.027 Sum_probs=185.1
Q ss_pred cccCCCCCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhhccccccEEEeeccccCCcCCccccccccc
Q 002061 188 SIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLL 267 (973)
Q Consensus 188 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L 267 (973)
.|.++++|+.+.|.. .++.+...+|.++++|+.++|.++ ++.....+|.++.+|+.+.+..+ +.......|.++..+
T Consensus 66 AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~ 142 (394)
T 4fs7_A 66 AFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFK 142 (394)
T ss_dssp TTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCS
T ss_pred HhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccccc
Confidence 355566666666653 355455567888888888888755 55455567777777777666544 333444556665443
Q ss_pred cEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccceeeeccCCccCCCCCccccccccccccccccc
Q 002061 268 QEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISEN 347 (973)
Q Consensus 268 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N 347 (973)
+..... .........|.++++|+.+.+.++. .......|.++.+|+.+.+..| ++......|..+..|+.+.+..+
T Consensus 143 ~~~~~~--~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~ 218 (394)
T 4fs7_A 143 EITIPE--GVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNS 218 (394)
T ss_dssp EEECCT--TCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTT
T ss_pred ccccCc--cccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCC
Confidence 332222 2222445567777777777776543 3344556777777777777655 44344556666777776666554
Q ss_pred cccccCChhhhhhhhHHHHHhhhccCCCCccccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCC
Q 002061 348 QFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISP 427 (973)
Q Consensus 348 ~l~~~~p~~~~~~~~ll~ll~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 427 (973)
... +.........|+.+.+..+. +.+....|.....++.+.+..+.. .+...
T Consensus 219 ~~~--------------------------i~~~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~~~-~i~~~ 270 (394)
T 4fs7_A 219 LYY--------------------------LGDFALSKTGVKNIIIPDSF-TELGKSVFYGCTDLESISIQNNKL-RIGGS 270 (394)
T ss_dssp CCE--------------------------ECTTTTTTCCCCEEEECTTC-CEECSSTTTTCSSCCEEEECCTTC-EECSC
T ss_pred ceE--------------------------eehhhcccCCCceEEECCCc-eecccccccccccceeEEcCCCcc-eeecc
Confidence 432 11222334566666665433 334455666677777777765532 34455
Q ss_pred CCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccc
Q 002061 428 LIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARI 507 (973)
Q Consensus 428 ~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 507 (973)
.|.....++.+.+..+.+ ....|..+.+|+.+.+.++ ++.+...+|.++.+|+.++|.++ ++.+-..+|.++.+|
T Consensus 271 ~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L 345 (394)
T 4fs7_A 271 LFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSL 345 (394)
T ss_dssp TTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTC
T ss_pred ccccccccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCC
Confidence 566666677766655443 2345666677777777654 44344556777777777777543 555556667777777
Q ss_pred cchhccccccccCCCccccccCCCCeeecCC
Q 002061 508 VDLNLARNSLSGNIPRSLSLLSSLNALNLSG 538 (973)
Q Consensus 508 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 538 (973)
+.+++..| ++..-..+|.++++|+.+++..
T Consensus 346 ~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~ 375 (394)
T 4fs7_A 346 SNINFPLS-LRKIGANAFQGCINLKKVELPK 375 (394)
T ss_dssp CEECCCTT-CCEECTTTBTTCTTCCEEEEEG
T ss_pred CEEEECcc-ccEehHHHhhCCCCCCEEEECC
Confidence 77777665 5545556677777777776643
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.46 E-value=1.2e-13 Score=136.36 Aligned_cols=106 Identities=25% Similarity=0.308 Sum_probs=76.9
Q ss_pred CCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhccc
Q 002061 435 LSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLAR 514 (973)
Q Consensus 435 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 514 (973)
-+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+++.+..|.++++|+.|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 367788888876 5565543 6777888888888777777777777777777777777766666667777777777777
Q ss_pred cccccCCCccccccCCCCeeecCCCccCC
Q 002061 515 NSLSGNIPRSLSLLSSLNALNLSGNKLTG 543 (973)
Q Consensus 515 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 543 (973)
|+|++..+..|..+++|+.|+|++|+++.
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccc
Confidence 77776555557777777777777777763
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.46 E-value=1.4e-13 Score=135.74 Aligned_cols=107 Identities=21% Similarity=0.257 Sum_probs=81.6
Q ss_pred CEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhccccccccCCCccccccCCCCeeecCCC
Q 002061 460 ERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGN 539 (973)
Q Consensus 460 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 539 (973)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 67888888886 5665554 67888888888888777778888888888888888888666666778888888888888
Q ss_pred ccCCCCChhhhccc-CceEEccCCccccccC
Q 002061 540 KLTGSIPDNLMKLK-LSSIDLSENQLSGSVP 569 (973)
Q Consensus 540 ~l~~~~p~~l~~l~-L~~l~ls~N~l~~~~p 569 (973)
+|++.++..+..++ |+.|+|++|+|.|.++
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 88865555576665 8888888888887776
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.38 E-value=9.3e-13 Score=146.19 Aligned_cols=93 Identities=24% Similarity=0.262 Sum_probs=44.4
Q ss_pred ccccccCCEEEcCC-cccccCCCccccccccccchhccccccccCCCccccccCCCCeeecCCCccCCCCChhhhcccCc
Q 002061 477 LGALRQLSSLHLEE-NALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLKLS 555 (973)
Q Consensus 477 ~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~L~ 555 (973)
+..+++|++|+|++ |+|++..+..|+++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.+|..+..++|+
T Consensus 27 l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~L~ 106 (347)
T 2ifg_A 27 LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQ 106 (347)
T ss_dssp SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCCCC
T ss_pred CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCCce
Confidence 44444444444443 44444444444444444444444444444444444555555555555555554333334334455
Q ss_pred eEEccCCccccccC
Q 002061 556 SIDLSENQLSGSVP 569 (973)
Q Consensus 556 ~l~ls~N~l~~~~p 569 (973)
.|+|++|+|.|.|+
T Consensus 107 ~l~l~~N~~~c~c~ 120 (347)
T 2ifg_A 107 ELVLSGNPLHCSCA 120 (347)
T ss_dssp EEECCSSCCCCCGG
T ss_pred EEEeeCCCccCCCc
Confidence 55555555555554
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.32 E-value=1.7e-14 Score=160.62 Aligned_cols=135 Identities=15% Similarity=0.134 Sum_probs=68.8
Q ss_pred CCCCcEEEecCCcccCCCC-cc----c-CCCCCCEEeccCccCCCccccccc-cccccceEEccCCcCCCCCCc---ccc
Q 002061 120 CSNLKVLNVTGNAMVGSVP-DL----S-ALKNLEIFDLSINYFTGRFPRWVV-NLTQLVSLSIGDNVYDEAEIP---ESI 189 (973)
Q Consensus 120 l~~L~~L~L~~n~l~~~~~-~l----~-~l~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~ip---~~~ 189 (973)
+++|++|+|++|.++.... .+ . ..++|++|||++|.+++.....+. .+++|++|+|++|.++..... ..+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 3567788888877754322 12 2 235777777777777654333332 355666666666665432210 111
Q ss_pred -cCCCCCCEEEcccCCCCCC----CChhhhccCCCCeeecccccccCCC----chhhhccccccEEEeeccccC
Q 002061 190 -GNLKNLTYLFLAHCNLRGR----IPESISELRELGTLDICRNKISGEF----PRSIRKLQKLWKIELYANNLT 254 (973)
Q Consensus 190 -~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~----~~~l~~l~~L~~L~L~~N~l~ 254 (973)
...++|++|+|++|.|+.. ++..+..+++|++|+|++|+|++.. +..+...++|++|+|++|.|+
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCC
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCC
Confidence 2345566666666655431 2223344555555555555554322 233334444444444444444
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.30 E-value=3.5e-14 Score=158.15 Aligned_cols=166 Identities=20% Similarity=0.212 Sum_probs=110.9
Q ss_pred CccCcEeeCCCCcccCcCChhhhCC-----CCCcEEEecCCcccCCC-Cc-ccCCCCCCEEeccCccCCCccccccc---
Q 002061 96 LQSLTVLSLPFNVLSGKLPLELSNC-----SNLKVLNVTGNAMVGSV-PD-LSALKNLEIFDLSINYFTGRFPRWVV--- 165 (973)
Q Consensus 96 l~~L~~L~Ls~n~l~~~~p~~l~~l-----~~L~~L~L~~n~l~~~~-~~-l~~l~~L~~L~Ls~n~l~~~~~~~~~--- 165 (973)
+++|++|+|++|.++......|... .+|++|+|++|.++... .. ...+++|++|+|++|.+++.....+.
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 3567778888877765443343333 67888888888774322 12 23456788888888888765554443
Q ss_pred --cccccceEEccCCcCCCCC---CcccccCCCCCCEEEcccCCCCCC----CChhhhccCCCCeeecccccccCCC---
Q 002061 166 --NLTQLVSLSIGDNVYDEAE---IPESIGNLKNLTYLFLAHCNLRGR----IPESISELRELGTLDICRNKISGEF--- 233 (973)
Q Consensus 166 --~l~~L~~L~l~~n~l~~~~---ip~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~--- 233 (973)
..++|++|+|++|.++... ++..+..+++|++|+|++|.|+.. ++..+...++|++|+|++|.|++..
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 3567888888888775422 344557788899999999988743 2456677788999999999987543
Q ss_pred -chhhhccccccEEEeeccccCCcCCccc
Q 002061 234 -PRSIRKLQKLWKIELYANNLTGELPAEL 261 (973)
Q Consensus 234 -~~~l~~l~~L~~L~L~~N~l~~~~~~~l 261 (973)
+..+...++|++|+|++|.|++.....+
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred HHHHHHhCCCCCEEeccCCCCCHHHHHHH
Confidence 3344456777778887777775444333
No 403
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.30 E-value=2.6e-12 Score=142.54 Aligned_cols=131 Identities=24% Similarity=0.223 Sum_probs=98.8
Q ss_pred EEEcccC-CCCCCCChhhhcCCCCCEEEccC-CcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhccc
Q 002061 437 QLVLQNN-RFSGELPSELGRLTNLERLILTN-NNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLAR 514 (973)
Q Consensus 437 ~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 514 (973)
.++++++ +|+ .+|. +..+++|+.|+|++ |+|++..+..|.++++|+.|+|++|+|++.+|..|.++++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4577777 777 4666 88888888888886 888877778888888888888888888888888888888888888999
Q ss_pred cccccCCCccccccCCCCeeecCCCccCCCCC-hhhhcc-cCceEEccCCccccccCc
Q 002061 515 NSLSGNIPRSLSLLSSLNALNLSGNKLTGSIP-DNLMKL-KLSSIDLSENQLSGSVPL 570 (973)
Q Consensus 515 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l-~L~~l~ls~N~l~~~~p~ 570 (973)
|+|++..+..|..++ |+.|+|++|+|..... .+|..+ ......+..++++|..|.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 988876666676666 9999999999984332 222222 133344556777777765
No 404
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.27 E-value=1.4e-10 Score=130.74 Aligned_cols=132 Identities=12% Similarity=0.253 Sum_probs=57.4
Q ss_pred ccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCC
Q 002061 379 NSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTN 458 (973)
Q Consensus 379 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~ 458 (973)
.+|.++..|+.+.+.++..+ +...+|.+++.|+.+.+. +.++.+... +|.++.+
T Consensus 259 ~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~------------------------aF~~c~~ 312 (394)
T 4gt6_A 259 HAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPES------------------------VFAGCIS 312 (394)
T ss_dssp TTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTT------------------------TTTTCTT
T ss_pred ceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCce------------------------eecCCCC
Confidence 34555555666555544332 344445455555555543 233333444 4444555
Q ss_pred CCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhccccccccCCCccccccCCCCeeecCC
Q 002061 459 LERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSG 538 (973)
Q Consensus 459 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 538 (973)
|+.++|..+ ++.+-..+|.++.+|+.+.+..+ ++.+-..+|.++.+|+.+++.+|.... ..|....+|+.+.+..
T Consensus 313 L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~ 387 (394)
T 4gt6_A 313 LKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAP 387 (394)
T ss_dssp CCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC-------
T ss_pred cCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCC
Confidence 555555432 33233344555555555555433 443444455555555555555543321 2344555555555555
Q ss_pred Ccc
Q 002061 539 NKL 541 (973)
Q Consensus 539 N~l 541 (973)
|.+
T Consensus 388 ~~~ 390 (394)
T 4gt6_A 388 GSI 390 (394)
T ss_dssp ---
T ss_pred CCE
Confidence 443
No 405
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.26 E-value=7.4e-11 Score=133.14 Aligned_cols=134 Identities=11% Similarity=0.176 Sum_probs=95.1
Q ss_pred CCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCcccccc
Q 002061 425 ISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDC 504 (973)
Q Consensus 425 ~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 504 (973)
....|..+..|+.+.+.++... ....+|.++++|+.+.+. +.++.+...+|.++.+|+.++|..+ ++.+-..+|.++
T Consensus 257 ~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C 333 (394)
T 4gt6_A 257 ETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGC 333 (394)
T ss_dssp CTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTC
T ss_pred ccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCC
Confidence 3445666777788777665443 566788889999999996 4566566779999999999999865 776778899999
Q ss_pred ccccchhccccccccCCCccccccCCCCeeecCCCccCCCCChhhhcccCceEEccCCcc
Q 002061 505 ARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLKLSSIDLSENQL 564 (973)
Q Consensus 505 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~L~~l~ls~N~l 564 (973)
.+|+.+.+..+ ++..-..+|.++++|+.+++.+|.... ........|+.+.+..|.+
T Consensus 334 ~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~--~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 334 EQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW--NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp TTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH--HTCBCCCCC----------
T ss_pred CCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh--hhhhccCCCCEEEeCCCCE
Confidence 99999999765 776667899999999999999987641 1112223477777766544
No 406
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.17 E-value=1.4e-11 Score=135.78 Aligned_cols=181 Identities=17% Similarity=0.162 Sum_probs=106.2
Q ss_pred CCceEEEeecCCCCCc-c-------ccccccCCccCcEeeCCCCccc---------CcCChhhhCCCCCcEEEecCCccc
Q 002061 72 TGRVTEISFDNKSLSG-E-------ISSSISALQSLTVLSLPFNVLS---------GKLPLELSNCSNLKVLNVTGNAMV 134 (973)
Q Consensus 72 ~~~v~~l~l~~~~l~~-~-------~~~~l~~l~~L~~L~Ls~n~l~---------~~~p~~l~~l~~L~~L~L~~n~l~ 134 (973)
..+|++|.+......| . +.+++..+++|+.|.+..+... +.++..+..+++|+.|+|++|.-.
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l 185 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL 185 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc
Confidence 4578999988766653 2 2445677899999999765431 235556788899999999887322
Q ss_pred CCCCcccCCCCCCEEeccCccCCCccccccc--cccccceEEccC--CcCC-CC---CCcccc--cCCCCCCEEEcccCC
Q 002061 135 GSVPDLSALKNLEIFDLSINYFTGRFPRWVV--NLTQLVSLSIGD--NVYD-EA---EIPESI--GNLKNLTYLFLAHCN 204 (973)
Q Consensus 135 ~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~--~l~~L~~L~l~~--n~l~-~~---~ip~~~--~~l~~L~~L~L~~n~ 204 (973)
..++ +. +++|++|+|..|.++......+. .+++|++|+|+. |... .. .+...+ ..+++|++|+|++|.
T Consensus 186 ~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~ 263 (362)
T 2ra8_A 186 SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAE 263 (362)
T ss_dssp BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCT
T ss_pred eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCC
Confidence 2222 43 78899999888887655444454 678888888753 2111 10 111122 235666666666666
Q ss_pred CCCCCChhhh---ccCCCCeeecccccccCCC----chhhhccccccEEEeeccccC
Q 002061 205 LRGRIPESIS---ELRELGTLDICRNKISGEF----PRSIRKLQKLWKIELYANNLT 254 (973)
Q Consensus 205 l~~~~~~~~~---~l~~L~~L~L~~N~l~~~~----~~~l~~l~~L~~L~L~~N~l~ 254 (973)
+++..+..+. .+++|++|+|+.|.|++.. +..+..+++|+.|+|++|.|+
T Consensus 264 i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 264 EQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp THHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 6533333332 3455666666666555432 222234455555555555554
No 407
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.10 E-value=1.9e-10 Score=121.86 Aligned_cols=143 Identities=17% Similarity=0.057 Sum_probs=111.3
Q ss_pred HHHcCCcccCcccccCceEEEEEEecCCCcEEEEEeeecc--ccHHHHHHHHHHHHhcC-CCceeeEEEEEEeCCeeEEE
Q 002061 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIR-HRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv 749 (973)
..+..|++...++.|+.+.||++... ++.+++|+.... .....+.+|+++++.+. +..+.++++++..++..|+|
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 34567888888899999999999755 679999987642 33446889999999984 67788899999888899999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhc----------------------------------
Q 002061 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHD---------------------------------- 795 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~---------------------------------- 795 (973)
|||++|.++.+... +......++.+++++++.||+-
T Consensus 89 ~e~i~G~~l~~~~~----------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (263)
T 3tm0_A 89 MSEADGVLCSEEYE----------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENW 158 (263)
T ss_dssp EECCSSEEHHHHCC----------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGG
T ss_pred EEecCCeehhhccC----------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccc
Confidence 99999999876521 0112236778899999999961
Q ss_pred ----------------------CCCCeEecCCCCCCeeecCCCCeEEecccCcc
Q 002061 796 ----------------------CSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 796 ----------------------~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
....++|+|++|.||+++++..+.|.||+.+.
T Consensus 159 ~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 159 EEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp STTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01458999999999999876556799999764
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.03 E-value=6.4e-09 Score=116.57 Aligned_cols=129 Identities=15% Similarity=0.186 Sum_probs=56.2
Q ss_pred ccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCCCCC
Q 002061 381 YADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLE 460 (973)
Q Consensus 381 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 460 (973)
+..+..|+.+.+..+ +..+....|.+...|+.+.+..+ ++.+....|....+|+.+.+..+ +.......|.++.+|+
T Consensus 213 f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~ 289 (379)
T 4h09_A 213 FSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLT 289 (379)
T ss_dssp TTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCC
T ss_pred cccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccc
Confidence 344445555554433 22233344444445555544433 33333444444444444444322 3323333444444455
Q ss_pred EEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhcc
Q 002061 461 RLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLA 513 (973)
Q Consensus 461 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 513 (973)
.+.+.++.++.+...+|.++.+|+.+.|..+ ++.+-..+|.++.+|+.+.+.
T Consensus 290 ~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 290 KVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp EEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred cccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEEC
Confidence 5444444444333344444444444444332 333333444444444444443
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.99 E-value=1.1e-08 Score=114.63 Aligned_cols=159 Identities=14% Similarity=0.116 Sum_probs=121.6
Q ss_pred cccccCccccceEeccccccccCCCccccCCCCcceEeccCCcCCCCCCCCCCCCCCCCEEEcccCCCCCCCChhhhcCC
Q 002061 378 PNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLT 457 (973)
Q Consensus 378 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~ 457 (973)
...+..+..+..+.+..+.-. .....+....+|+.+.+..+ +..+....|.....|+.+.+..+ ++.....+|.++.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~ 263 (379)
T 4h09_A 187 LESYPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCT 263 (379)
T ss_dssp EEECCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCT
T ss_pred eccccccccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceee
Confidence 344555666776666554433 55667777888888888655 55566677788889999999776 6656677888899
Q ss_pred CCCEEEccCCcCCCCccccccccccCCEEEcCCcccccCCCccccccccccchhccccccccCCCccccccCCCCeeecC
Q 002061 458 NLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLS 537 (973)
Q Consensus 458 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 537 (973)
+|+.+.+..+ ++.....+|.++.+|+.+.+.++.++.+...+|.++.+|+.++|..+ ++..-..+|.++++|+.+.+.
T Consensus 264 ~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 264 ALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp TCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred hhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEEC
Confidence 9999998754 55456678889999999999988888788888999999999999765 765667789999999998886
Q ss_pred CCccC
Q 002061 538 GNKLT 542 (973)
Q Consensus 538 ~N~l~ 542 (973)
.+ ++
T Consensus 342 ~~-v~ 345 (379)
T 4h09_A 342 KS-IT 345 (379)
T ss_dssp TT-CC
T ss_pred Cc-cC
Confidence 54 55
No 410
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.97 E-value=9e-10 Score=116.58 Aligned_cols=136 Identities=17% Similarity=0.180 Sum_probs=96.5
Q ss_pred CCcccCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhcCCCc--eeeEEEEEEeCCeeEEEEEccC
Q 002061 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRN--ILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpn--iv~l~~~~~~~~~~~lv~e~~~ 754 (973)
.+.+....+.|..+.||++... +|..+++|+.... ....+.+|+++++.+.+.+ +.+++++...++..++||||++
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~-~g~~~vlK~~~~~-~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~ 98 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQ-GRPVLFVKTDLSG-ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVP 98 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECT-TSCCEEEEEECSC-TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCS
T ss_pred CCceEecccCCCCceEEEEecC-CCCeEEEEeCCcc-cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecC
Confidence 3444333345666999999754 4678999986554 3356789999999986544 4568888887788999999999
Q ss_pred CCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcC--------------------------------------
Q 002061 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDC-------------------------------------- 796 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~-------------------------------------- 796 (973)
|.++. .. ..+ ...++.++++.++.+|+..
T Consensus 99 G~~l~--~~--------~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
T 1nd4_A 99 GQDLL--SS--------HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGL 165 (264)
T ss_dssp SEETT--TS--------CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTC
T ss_pred CcccC--cC--------cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCc
Confidence 98884 11 011 1245666777777777421
Q ss_pred -----------------CCCeEecCCCCCCeeecCCCCeEEecccCcc
Q 002061 797 -----------------SPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 797 -----------------~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
...++|+|++|.||++++++.+.|.||+.+.
T Consensus 166 ~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 166 APAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp CHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred cHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1239999999999999877667799999864
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.90 E-value=4.8e-10 Score=123.53 Aligned_cols=137 Identities=16% Similarity=0.144 Sum_probs=58.8
Q ss_pred ccccCCCCCCEEEcccCCCCCCCChhhhccCCCCeeecccccccCCCchhhh--ccccccEEEeec--cccCCc-----C
Q 002061 187 ESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIR--KLQKLWKIELYA--NNLTGE-----L 257 (973)
Q Consensus 187 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~--~l~~L~~L~L~~--N~l~~~-----~ 257 (973)
..+..+++|+.|+|++|.-. .++. + .+++|++|+|..|.++......+. .+++|++|+|+. |...+. +
T Consensus 166 ~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l 242 (362)
T 2ra8_A 166 PVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVF 242 (362)
T ss_dssp HHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGT
T ss_pred HHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHH
Confidence 33444455555555544211 1111 2 245555555555555433333333 455555555542 111100 0
Q ss_pred Cccc--cccccccEEEeeccccccccCCccC---CCCCccEEEcccCCCCCC----CCCCcCCcccceeeeccCCccC
Q 002061 258 PAEL--GNLTLLQEFDISSNQMYGKLPEEIG---NLKNLTVFQCFKNNFSGE----FPSGFGDMRKLFAFSIYGNRFS 326 (973)
Q Consensus 258 ~~~l--~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 326 (973)
...+ ..+++|+.|+|++|.+.+..+..+. .+++|++|+|+.|.+++. ++..+..+++|+.|++++|.|+
T Consensus 243 ~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 243 RPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp GGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred HHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 0111 1345566666666555432222221 345555555555555542 2222234455555555555544
No 412
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.90 E-value=2.9e-11 Score=126.16 Aligned_cols=161 Identities=17% Similarity=0.200 Sum_probs=77.9
Q ss_pred CCCcceeeeCCCCCceEEEeecC---CCCCccccc-cccCCccCcEeeCCCCcccCcCCh-hhhCCCCCcE--EEecCCc
Q 002061 60 PCGFSGITCDSVTGRVTEISFDN---KSLSGEISS-SISALQSLTVLSLPFNVLSGKLPL-ELSNCSNLKV--LNVTGNA 132 (973)
Q Consensus 60 ~c~w~gv~C~~~~~~v~~l~l~~---~~l~~~~~~-~l~~l~~L~~L~Ls~n~l~~~~p~-~l~~l~~L~~--L~L~~n~ 132 (973)
.|.|.|+.|+....+|+.+...+ ..+.|.+.+ .+..++. .|..++|.-++.+.- .|...+.|+. ++++.|.
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR 154 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTS
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCH
Confidence 48899999997666887766655 334444432 3333332 233333333322221 1333333333 4444443
Q ss_pred ccCCCC---c-ccCCCCCCEEeccCccCCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccCCCCCC
Q 002061 133 MVGSVP---D-LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGR 208 (973)
Q Consensus 133 l~~~~~---~-l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~ 208 (973)
...... . ..++++|+.|+|++|.|++.. .+|..+..+++|+.|+|++|+|++.
T Consensus 155 ~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~-----------------------~l~~~~~~l~~L~~L~Ls~N~i~~~ 211 (267)
T 3rw6_A 155 RSCMAATLRIIEENIPELLSLNLSNNRLYRLD-----------------------DMSSIVQKAPNLKILNLSGNELKSE 211 (267)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEECTTSCCCCCG-----------------------GGTTHHHHSTTCCEEECTTSCCCSG
T ss_pred HHHHHHHHHHHHhhCCCCCEEECCCCCCCCCc-----------------------cchhHHhhCCCCCEEECCCCccCCc
Confidence 221111 1 133455555555555555411 1233444555555555555555533
Q ss_pred CChhhhccC--CCCeeecccccccCCCc-------hhhhccccccEEE
Q 002061 209 IPESISELR--ELGTLDICRNKISGEFP-------RSIRKLQKLWKIE 247 (973)
Q Consensus 209 ~~~~~~~l~--~L~~L~L~~N~l~~~~~-------~~l~~l~~L~~L~ 247 (973)
..+..++ +|++|+|++|.+.+.+| ..+..+++|+.||
T Consensus 212 --~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 212 --RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp --GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred --hhhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 2333333 56666666666654443 2355666666554
No 413
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.82 E-value=2.6e-09 Score=115.73 Aligned_cols=187 Identities=21% Similarity=0.170 Sum_probs=119.2
Q ss_pred cCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhcC-CCc--eeeEEEEEEeCC---eeEEEEEccC
Q 002061 681 DNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIR-HRN--ILKLYACLLKGG---SSFLVLEYMP 754 (973)
Q Consensus 681 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~-hpn--iv~l~~~~~~~~---~~~lv~e~~~ 754 (973)
.+.++.|....||++. ..+++|+.........+.+|+++++.+. +.. +.+++.....+. ..|+||||++
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESSHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCCcchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 3568999999999863 4689998665545677899999998883 332 233444333322 3489999999
Q ss_pred CCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhc---------------------------------------
Q 002061 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHD--------------------------------------- 795 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~--------------------------------------- 795 (973)
|.++.+.... .++..++..++.++++.++.||+-
T Consensus 100 G~~l~~~~~~-------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
T 3sg8_A 100 GVPLTPLLLN-------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK 172 (304)
T ss_dssp CEECCHHHHH-------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred CeECCccccc-------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence 9988754321 245556666677777777777641
Q ss_pred ----------------CCCCeEecCCCCCCeeecC--CCCeEEecccCcccccCCCCcccccc-c---CC---------c
Q 002061 796 ----------------CSPPIIHRDIKSSNILLDE--DYEPKIADFGVAKIAENSPKVSDYSC-F---AG---------T 844 (973)
Q Consensus 796 ----------------~~~~ivH~Dlkp~Nill~~--~~~~kl~Dfgl~~~~~~~~~~~~~~~-~---~g---------t 844 (973)
....++|+|++|.||++++ +..+.+.||+.+..-.+. ....... . .+ .
T Consensus 173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~-~Dl~~~~~~~~~~~~~~~~~~l~~ 251 (304)
T 3sg8_A 173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPD-NDFISLMEDDEEYGMEFVSKILNH 251 (304)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTT-HHHHTTCCTTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChH-HHHHHHHhhccccCHHHHHHHHHH
Confidence 1235899999999999998 456789999988643221 1000000 0 00 0
Q ss_pred ccccc-ccccccCCCCccchHHHHHHHHHHHHhCCCCCC
Q 002061 845 HGYIA-PELAYTCKVSEKSDVFSFGVVLLELVTGRKPVE 882 (973)
Q Consensus 845 ~~y~a-PE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~ 882 (973)
.++.. |+.... .....+.|++|.++|.+.+|..+|-
T Consensus 252 Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 252 YKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred cCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 01111 222111 1123689999999999999987763
No 414
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.79 E-value=1.1e-08 Score=113.58 Aligned_cols=139 Identities=17% Similarity=0.272 Sum_probs=104.4
Q ss_pred cCcccccCceEEEEEEecCCCcEEEEEeee--cc---ccHHHHHHHHHHHHhcC--CCceeeEEEEEEeC---CeeEEEE
Q 002061 681 DNLIGSGGTGKVYRLDLKKNAGTVAVKQLW--KG---DGVKVFAAEMEILGKIR--HRNILKLYACLLKG---GSSFLVL 750 (973)
Q Consensus 681 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~--~~---~~~~~~~~E~~~l~~l~--hpniv~l~~~~~~~---~~~~lv~ 750 (973)
.+.++.|.++.||+.... +..+++|+.. .. .....+.+|+.+++.+. +..+.+++.++.+. +..|+||
T Consensus 43 ~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred EEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 467899999999998876 4688999876 32 22346788999999996 45577888887765 4589999
Q ss_pred EccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcC----------------------------------
Q 002061 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDC---------------------------------- 796 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~---------------------------------- 796 (973)
||++|..+.+. ....++...+..++.+++++|+.||+..
T Consensus 121 e~v~G~~l~~~-------~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (359)
T 3dxp_A 121 EFVSGRVLWDQ-------SLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETES 193 (359)
T ss_dssp ECCCCBCCCCT-------TCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSC
T ss_pred EecCCeecCCC-------ccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcC
Confidence 99998776431 1223567778888999999999999620
Q ss_pred ---------------------CCCeEecCCCCCCeeecCCCC--eEEecccCccc
Q 002061 797 ---------------------SPPIIHRDIKSSNILLDEDYE--PKIADFGVAKI 828 (973)
Q Consensus 797 ---------------------~~~ivH~Dlkp~Nill~~~~~--~kl~Dfgl~~~ 828 (973)
...++|+|+++.||+++.++. +.|.||+.+..
T Consensus 194 ~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 194 IPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred ChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 256999999999999998753 68999998863
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.56 E-value=6e-09 Score=103.52 Aligned_cols=122 Identities=12% Similarity=0.094 Sum_probs=71.8
Q ss_pred cccccccCCccCcEeeCCCC-cccCc----CChhhhCCCCCcEEEecCCcccCC-----CCcccCCCCCCEEeccCccCC
Q 002061 88 EISSSISALQSLTVLSLPFN-VLSGK----LPLELSNCSNLKVLNVTGNAMVGS-----VPDLSALKNLEIFDLSINYFT 157 (973)
Q Consensus 88 ~~~~~l~~l~~L~~L~Ls~n-~l~~~----~p~~l~~l~~L~~L~L~~n~l~~~-----~~~l~~l~~L~~L~Ls~n~l~ 157 (973)
.+...+...+.|++|+|++| .++.. +...+...++|++|+|++|.+... ...+...++|++|+|++|.|+
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 44555666777888888877 77542 334455566666777666666321 112344455666666666555
Q ss_pred CccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEc--ccCCCCCC----CChhhhccCCCCeeeccccccc
Q 002061 158 GRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFL--AHCNLRGR----IPESISELRELGTLDICRNKIS 230 (973)
Q Consensus 158 ~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L--~~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~ 230 (973)
+.... .+.+.+...++|++|+| ++|.|+.. +...+...++|++|+|++|.|.
T Consensus 107 ~~g~~---------------------~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 107 GSGIL---------------------ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHH---------------------HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHH---------------------HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 32111 12344555566777777 66777643 2344555678888888888875
No 416
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.51 E-value=3.2e-07 Score=99.90 Aligned_cols=137 Identities=16% Similarity=0.214 Sum_probs=96.6
Q ss_pred CCcccCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhcCC----CceeeEEEEEEeCCeeEEEEEc
Q 002061 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRH----RNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h----pniv~l~~~~~~~~~~~lv~e~ 752 (973)
.+...+.++.|....||+. +..+++|+.........+.+|+++++.+.+ ..+.+++++ +..|+||||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~ 108 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC-----NEQYVVKVPKRDSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKY 108 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE-----TTTEEEEEESSHHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEEC
T ss_pred ceEEEEeCCCCCCceEEEE-----CCEEEEEeCCcHHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEee
Confidence 4455678999999999998 567899987655545678999999998865 123344443 567899999
Q ss_pred cCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcC------------------------------------
Q 002061 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDC------------------------------------ 796 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~------------------------------------ 796 (973)
++|.++.+.... .++..+...++.++++.++.||+..
T Consensus 109 i~G~~l~~~~~~-------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (320)
T 3r70_A 109 IKGERITYEQYH-------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLL 181 (320)
T ss_dssp CCCBCCCHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCccccccccc-------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccc
Confidence 999988643211 2344444555555666555555321
Q ss_pred ------------------------CCCeEecCCCCCCeeecCCCCeEEecccCcccc
Q 002061 797 ------------------------SPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 797 ------------------------~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
...++|+|++|.||+++.++.+.+.||+.+..-
T Consensus 182 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 182 TDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp CHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred cccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 234699999999999999766799999988643
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.37 E-value=6.4e-08 Score=96.04 Aligned_cols=40 Identities=18% Similarity=0.157 Sum_probs=19.5
Q ss_pred CCCCCCEEEcccCCCCCC----CChhhhccCCCCeeec--cccccc
Q 002061 191 NLKNLTYLFLAHCNLRGR----IPESISELRELGTLDI--CRNKIS 230 (973)
Q Consensus 191 ~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L--~~N~l~ 230 (973)
..++|++|+|++|.|+.. +...+...++|++|+| ++|.|+
T Consensus 91 ~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 91 VNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred hCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCC
Confidence 334555555555555432 2333444455555555 455554
No 418
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.33 E-value=9.2e-08 Score=99.64 Aligned_cols=41 Identities=27% Similarity=0.341 Sum_probs=21.4
Q ss_pred cCCCCCEEEccCCcCCC--CccccccccccCCEEEcCCccccc
Q 002061 455 RLTNLERLILTNNNFSG--KIPSALGALRQLSSLHLEENALTG 495 (973)
Q Consensus 455 ~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~ 495 (973)
++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~ 210 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKS 210 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCS
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCC
Confidence 44555555555555554 223444455555555555555553
No 419
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.27 E-value=3.9e-06 Score=88.90 Aligned_cols=135 Identities=21% Similarity=0.165 Sum_probs=93.8
Q ss_pred cccccCce-EEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhcC-CCceeeEEEEEEeCCeeEEEEEccCCCchHH
Q 002061 683 LIGSGGTG-KVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIR-HRNILKLYACLLKGGSSFLVLEYMPNGNLFQ 760 (973)
Q Consensus 683 ~lG~G~~g-~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~e~~~~gsL~~ 760 (973)
.+..|..| .||+......+..++||+... .....+.+|+..++.+. +--+-++++++.+++..|+|||+++|.++.+
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~ 109 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG-SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQ 109 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET-HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC-CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccc
Confidence 34556555 699988877677899997543 34556889999998884 3335677888888899999999999988776
Q ss_pred HHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhc---------------------------------------------
Q 002061 761 ALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHD--------------------------------------------- 795 (973)
Q Consensus 761 ~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~--------------------------------------------- 795 (973)
..... ......++.+++..++.||+-
T Consensus 110 ~~~~~---------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (272)
T 4gkh_A 110 VLEEY---------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVW 180 (272)
T ss_dssp HHHHC---------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHH
T ss_pred cccCC---------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHH
Confidence 54321 011123344444444444421
Q ss_pred ----------CCCCeEecCCCCCCeeecCCCCeEEecccCcc
Q 002061 796 ----------CSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 796 ----------~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
....++|+|+.+.||+++.++.+-|.||+.+.
T Consensus 181 ~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 181 KEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 01237899999999999987777799999764
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.27 E-value=4e-06 Score=90.42 Aligned_cols=75 Identities=15% Similarity=0.106 Sum_probs=56.2
Q ss_pred cCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhcCCC---ceeeEEEEEE-eCCeeEEEEEccCCC
Q 002061 681 DNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHR---NILKLYACLL-KGGSSFLVLEYMPNG 756 (973)
Q Consensus 681 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp---niv~l~~~~~-~~~~~~lv~e~~~~g 756 (973)
.+.++.|....||+. ++.++||+.........+.+|+++++.+.+. .+-+++.+.. ..+..++||||++|.
T Consensus 24 v~~l~~G~~n~v~~v-----g~~~VlR~~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 24 VESLGEGFRNYAILV-----NGDWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEEECSSEEEEEE-----TTTEEEEEESSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eeecCCCcceeEEEE-----CCEEEEEecCCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 356788999999988 4678999864444556789999999999642 2445566554 455678999999998
Q ss_pred chHH
Q 002061 757 NLFQ 760 (973)
Q Consensus 757 sL~~ 760 (973)
++.+
T Consensus 99 ~l~~ 102 (306)
T 3tdw_A 99 ILGE 102 (306)
T ss_dssp ECHH
T ss_pred ECch
Confidence 8865
No 421
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.08 E-value=1.1e-05 Score=85.72 Aligned_cols=74 Identities=18% Similarity=0.130 Sum_probs=57.8
Q ss_pred ccCcccccCceEEEEEEecCCCcEEEEEeeecc--ccHHHHHHHHHHHHhcCCC---ceeeEEEEEEeCCeeEEEEEccC
Q 002061 680 EDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHR---NILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 680 ~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp---niv~l~~~~~~~~~~~lv~e~~~ 754 (973)
..+.|+.|.++.||++...+ |+.++||+.... .....+.+|++.++.+.+. .+.+++++. ..++||||++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~d-G~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELAD-GTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEETTEEEEEEEETT-SCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred ceeeeCCcchhheEEEEeCC-CCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 34679999999999998754 789999986432 2346789999999999765 466777653 3689999999
Q ss_pred CCch
Q 002061 755 NGNL 758 (973)
Q Consensus 755 ~gsL 758 (973)
++++
T Consensus 94 g~~~ 97 (288)
T 3d1u_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9875
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.90 E-value=4.6e-05 Score=84.03 Aligned_cols=75 Identities=7% Similarity=0.036 Sum_probs=55.9
Q ss_pred ccCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhcCCCc--eeeEEEEEEeC-CeeEEEEEccCCC
Q 002061 680 EDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRN--ILKLYACLLKG-GSSFLVLEYMPNG 756 (973)
Q Consensus 680 ~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpn--iv~l~~~~~~~-~~~~lv~e~~~~g 756 (973)
..+.++.|....+|+.... ++.+++|+.... ..+.+|+.+++.+.... +-+++.+.... +..|+||||++|.
T Consensus 45 ~i~~l~gG~~n~~y~v~~~--g~~~vlK~~~~~---~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~ 119 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDVG--GRGYVLRVNSCA---DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGV 119 (362)
T ss_dssp EEEEEEECSSEEEEEEEET--TEEEEEEEESCC---HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSE
T ss_pred eEEECCCCCcceEEEEEEC--CcEEEEEeCCch---hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCC
Confidence 4567899999999998753 778999976443 25788999999886433 44566665554 6689999999986
Q ss_pred chH
Q 002061 757 NLF 759 (973)
Q Consensus 757 sL~ 759 (973)
++.
T Consensus 120 ~l~ 122 (362)
T 3ovc_A 120 TLQ 122 (362)
T ss_dssp ETT
T ss_pred Ccc
Confidence 653
No 423
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.87 E-value=5.9e-06 Score=79.62 Aligned_cols=82 Identities=11% Similarity=0.164 Sum_probs=39.8
Q ss_pred CCCEEEcccCCCCCCCChhhhccCCCCeeeccccc-ccCCCchhhhcc----ccccEEEeeccc-cCCcCCccccccccc
Q 002061 194 NLTYLFLAHCNLRGRIPESISELRELGTLDICRNK-ISGEFPRSIRKL----QKLWKIELYANN-LTGELPAELGNLTLL 267 (973)
Q Consensus 194 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~l~~l----~~L~~L~L~~N~-l~~~~~~~l~~l~~L 267 (973)
+|++|+|++|.++..--..+..+++|++|+|++|. |++..-..++.+ ++|++|+|++|. ||+..-..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555544333444555555555555552 443333334332 245555555542 544333344455555
Q ss_pred cEEEeecc
Q 002061 268 QEFDISSN 275 (973)
Q Consensus 268 ~~L~Ls~N 275 (973)
++|+|+++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555554
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.81 E-value=8.5e-06 Score=78.50 Aligned_cols=64 Identities=14% Similarity=0.236 Sum_probs=35.8
Q ss_pred ccCCCCCCEEEcccCC-CCCCCChhhhcc----CCCCeeecccc-cccCCCchhhhccccccEEEeeccc
Q 002061 189 IGNLKNLTYLFLAHCN-LRGRIPESISEL----RELGTLDICRN-KISGEFPRSIRKLQKLWKIELYANN 252 (973)
Q Consensus 189 ~~~l~~L~~L~L~~n~-l~~~~~~~~~~l----~~L~~L~L~~N-~l~~~~~~~l~~l~~L~~L~L~~N~ 252 (973)
+.++++|++|+|++|. ++...-..++.+ ++|++|+|++| +|++..-..+.++++|++|+|+++.
T Consensus 81 L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 81 MEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp GTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTCCEEEEESCT
T ss_pred hcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCCCEEECCCCC
Confidence 4455666666666653 443322334433 24666666665 3665555556666677777776654
No 425
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.74 E-value=3.8e-05 Score=84.85 Aligned_cols=79 Identities=9% Similarity=0.155 Sum_probs=55.2
Q ss_pred cCcc-cccCceEEEEEEec--C----CCcEEEEEeeeccc-----cHHHHHHHHHHHHhcC-C--CceeeEEEEEEeC--
Q 002061 681 DNLI-GSGGTGKVYRLDLK--K----NAGTVAVKQLWKGD-----GVKVFAAEMEILGKIR-H--RNILKLYACLLKG-- 743 (973)
Q Consensus 681 ~~~l-G~G~~g~V~~a~~~--~----~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~-h--pniv~l~~~~~~~-- 743 (973)
.+.| +.|....+|+.... . +++.+++|+..... ....+.+|+.+++.+. + ..+.+++.+..++
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88889999988764 1 15678999765432 1245788999998884 3 3466777776554
Q ss_pred -CeeEEEEEccCCCchH
Q 002061 744 -GSSFLVLEYMPNGNLF 759 (973)
Q Consensus 744 -~~~~lv~e~~~~gsL~ 759 (973)
+..|+||||++|..+.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 3578999999887653
No 426
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.72 E-value=0.00025 Score=77.64 Aligned_cols=142 Identities=17% Similarity=0.206 Sum_probs=81.3
Q ss_pred CcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhcC-----CCceeeEE-E--EEEeCCeeEEEEEcc
Q 002061 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIR-----HRNILKLY-A--CLLKGGSSFLVLEYM 753 (973)
Q Consensus 682 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~-----hpniv~l~-~--~~~~~~~~~lv~e~~ 753 (973)
+.|+.|..+.||+.... +..+++|+.... ...+..|+.+++.+. .|.++... + +...++..++||||+
T Consensus 38 ~~l~gG~~n~~~~v~~~--~~~~vlk~~~~~--~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTD--SGAVCLKRIHRP--EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp EECC----CEEEEEEET--TEEEEEEEECSC--HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eeccccccCcEEEEEeC--CCCEEEEecCCC--HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 45666778999998875 346899987653 234445666665553 34444311 0 123466789999999
Q ss_pred CCCchH--------------HHHHhhhcCC--C-------CCCCHHHHH-------------------------------
Q 002061 754 PNGNLF--------------QALHKRVKEG--K-------PELDWFRRY------------------------------- 779 (973)
Q Consensus 754 ~~gsL~--------------~~l~~~~~~~--~-------~~~~~~~~~------------------------------- 779 (973)
+|.++. ..++...... . ....|....
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 986542 1122211110 0 011232110
Q ss_pred HHHHHHHHHHhhhhh----------cCCCCeEecCCCCCCeeecCCCCeEEecccCcc
Q 002061 780 KIALGAAKGIAYLHH----------DCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 780 ~i~~~ia~~l~~LH~----------~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
.+..++..++++++. .....++|+|+++.||+++.++.+.+.||+.+.
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111123345666652 025789999999999999888899999999764
No 427
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.68 E-value=0.00014 Score=81.59 Aligned_cols=74 Identities=14% Similarity=0.139 Sum_probs=49.6
Q ss_pred cCcccccCceEEEEEEecCCCcEEEEEeeecc---------ccHHHHHHHHHHHHhcCC--Ccee-eEEEEEEeCCeeEE
Q 002061 681 DNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---------DGVKVFAAEMEILGKIRH--RNIL-KLYACLLKGGSSFL 748 (973)
Q Consensus 681 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---------~~~~~~~~E~~~l~~l~h--pniv-~l~~~~~~~~~~~l 748 (973)
.+.||.|..+.||++.....++.|+||..... ....++.+|.++++.+.. |..+ +++.+ +++..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 45789999999999987655788999975431 123456789999988742 3333 44443 3455689
Q ss_pred EEEccCCC
Q 002061 749 VLEYMPNG 756 (973)
Q Consensus 749 v~e~~~~g 756 (973)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999774
No 428
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.32 E-value=4.6e-05 Score=74.83 Aligned_cols=121 Identities=12% Similarity=0.098 Sum_probs=67.9
Q ss_pred ccccccCCccCcEeeCCCC-cccCc----CChhhhCCCCCcEEEecCCcccCCC-----CcccCCCCCCEEeccCccCCC
Q 002061 89 ISSSISALQSLTVLSLPFN-VLSGK----LPLELSNCSNLKVLNVTGNAMVGSV-----PDLSALKNLEIFDLSINYFTG 158 (973)
Q Consensus 89 ~~~~l~~l~~L~~L~Ls~n-~l~~~----~p~~l~~l~~L~~L~L~~n~l~~~~-----~~l~~l~~L~~L~Ls~n~l~~ 158 (973)
+...+..-+.|++|+|++| .|... +-.++..-+.|+.|+|++|.|...- ..+..-+.|++|+|++|.|.+
T Consensus 33 l~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 33 INRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp HHHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred HHHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCH
Confidence 3344555677778888774 66532 3344555666777777777664211 123344566666666666653
Q ss_pred ccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccCCC---CC----CCChhhhccCCCCeeeccccccc
Q 002061 159 RFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNL---RG----RIPESISELRELGTLDICRNKIS 230 (973)
Q Consensus 159 ~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l---~~----~~~~~~~~l~~L~~L~L~~N~l~ 230 (973)
..... +-+.+..-+.|++|+|++|.. .. .+.+.+..-+.|+.|+++.|.+.
T Consensus 113 ~Ga~a---------------------la~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 113 ELLAR---------------------LLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHH---------------------HHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHH---------------------HHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 32221 122344445677777775532 31 13345566678888888877654
No 429
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.28 E-value=0.0033 Score=67.18 Aligned_cols=140 Identities=20% Similarity=0.242 Sum_probs=92.3
Q ss_pred cCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhcC---CCceeeEEEEEEeCCeeEEEEEccCCCc
Q 002061 681 DNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIR---HRNILKLYACLLKGGSSFLVLEYMPNGN 757 (973)
Q Consensus 681 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~---hpniv~l~~~~~~~~~~~lv~e~~~~gs 757 (973)
.+.|+.|....+|+.... ++.++||+.... ....+.+|++.++.+. ...+.+++++...++..++||||+++..
T Consensus 41 ~~~l~gG~~n~~y~v~~~--~~~~vlK~~~~~-~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~ 117 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLINDE--VQTVFVKINERS-YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSK 117 (312)
T ss_dssp EEEECCSSSSEEEEEESS--SCEEEEEEEEGG-GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred eEEeCCccceeeeEEEEC--CCeEEEEeCCcc-cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCC
Confidence 467899999999998763 678999976543 4667889999998883 3567788888887888999999999876
Q ss_pred hH--------H---HHHhhhcCC-----------------CCCCCHHHHH---HHHHH----------------HHHH-H
Q 002061 758 LF--------Q---ALHKRVKEG-----------------KPELDWFRRY---KIALG----------------AAKG-I 789 (973)
Q Consensus 758 L~--------~---~l~~~~~~~-----------------~~~~~~~~~~---~i~~~----------------ia~~-l 789 (973)
+. + .++...... ...-+|.... ++..+ ++.. .
T Consensus 118 ~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~ 197 (312)
T 3jr1_A 118 NKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVA 197 (312)
T ss_dssp CCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 52 1 122211100 0112454432 11111 1111 1
Q ss_pred hhhhh-cCCCCeEecCCCCCCeeecCCCCeEEeccc
Q 002061 790 AYLHH-DCSPPIIHRDIKSSNILLDEDYEPKIADFG 824 (973)
Q Consensus 790 ~~LH~-~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 824 (973)
..|.. .....++|+|+.+.|++++.++ +.|.|++
T Consensus 198 ~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 198 DTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 23321 1246799999999999999887 8899974
No 430
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.07 E-value=0.00067 Score=62.22 Aligned_cols=61 Identities=26% Similarity=0.336 Sum_probs=42.3
Q ss_pred chhccccccc-cCCCccccccCCCCeeecCCCccCCCCChhhhccc-CceEEccCCccccccCcc
Q 002061 509 DLNLARNSLS-GNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLD 571 (973)
Q Consensus 509 ~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-L~~l~ls~N~l~~~~p~~ 571 (973)
.++.+++.|+ ..+|..+ -++|+.|+|++|+|+...+..|..++ |+.|+|++|+|.|++...
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~l~ 74 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRLV 74 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGGGH
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCccH
Confidence 4566666665 2344332 23588888888888865555666665 888999999999988864
No 431
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.05 E-value=0.00019 Score=70.53 Aligned_cols=16 Identities=19% Similarity=0.086 Sum_probs=8.2
Q ss_pred ccccccccEEEeeccc
Q 002061 261 LGNLTLLQEFDISSNQ 276 (973)
Q Consensus 261 l~~l~~L~~L~Ls~N~ 276 (973)
+..-+.|+.|+++.|.
T Consensus 153 L~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 153 IEENESLLRVGISFAS 168 (197)
T ss_dssp HHHCSSCCEEECCCCC
T ss_pred HHhCCCcCeEeccCCC
Confidence 3344555555555554
No 432
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.00 E-value=0.0021 Score=72.35 Aligned_cols=77 Identities=14% Similarity=0.191 Sum_probs=48.3
Q ss_pred CCCeEecCCCCCCeeecCCCCeEEecccCcccccCCCCcccccccCC--ccccccccccccC---CCCccchHHHHHHHH
Q 002061 797 SPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAG--THGYIAPELAYTC---KVSEKSDVFSFGVVL 871 (973)
Q Consensus 797 ~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~---~~~~~~DvwslG~~l 871 (973)
...++|+|++|.||+++.++ +++.||+.+..-.+. .+.....+ ...|.+|+..... ......++.+....+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~---~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMG---FDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQT 306 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHH---HHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchH---HHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHH
Confidence 67899999999999999876 999999988633221 11111111 2346666654311 111234556778888
Q ss_pred HHHHhC
Q 002061 872 LELVTG 877 (973)
Q Consensus 872 ~el~tg 877 (973)
|+.+++
T Consensus 307 ~~~y~~ 312 (420)
T 2pyw_A 307 WNLFNK 312 (420)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887765
No 433
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.95 E-value=0.0024 Score=67.80 Aligned_cols=76 Identities=17% Similarity=0.154 Sum_probs=53.6
Q ss_pred CcccCcccccCceEEEEEEecCCCcEEEEEeeecc--ccHHHHHHHHHHHHhcCCC---ceeeEEEEEEeCCeeEEEEEc
Q 002061 678 LEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHR---NILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 678 ~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp---niv~l~~~~~~~~~~~lv~e~ 752 (973)
...++.+|.|..+.||+....+ |+.|+||+.... .....+.+|+..|+.+.-. -+.+++++ . ..++||||
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~D-G~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~--~~~lv~e~ 91 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELAD-GTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--D--DRTLAMEW 91 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETT-SCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--E--TTEEEEEC
T ss_pred eEEEEecCCCCCeEEEEEEECC-CCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--c--CceEEEEe
Confidence 3445778999999999998764 889999976542 2335688999999988421 23344443 2 24789999
Q ss_pred cCCCch
Q 002061 753 MPNGNL 758 (973)
Q Consensus 753 ~~~gsL 758 (973)
++++..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 987654
No 434
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.80 E-value=0.0026 Score=67.96 Aligned_cols=70 Identities=16% Similarity=0.138 Sum_probs=44.9
Q ss_pred cCcccccCceEEEEEEecCCCcEEEEEeeeccc-cHHHHHHHHHHHHhcCCCcee-eEEEEEEeCCeeEEEEEcc-CCCc
Q 002061 681 DNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-GVKVFAAEMEILGKIRHRNIL-KLYACLLKGGSSFLVLEYM-PNGN 757 (973)
Q Consensus 681 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~hpniv-~l~~~~~~~~~~~lv~e~~-~~gs 757 (973)
.+.|+.|....+|+. +.+++|+..... ..-...+|+.+++.+...++. +++++ .++.-++|+||+ ++.+
T Consensus 23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA------GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE------TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee------eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCcc
Confidence 577899999999998 468899765421 111235788888777433333 44443 343457899999 6655
Q ss_pred h
Q 002061 758 L 758 (973)
Q Consensus 758 L 758 (973)
+
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 5
No 435
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.70 E-value=0.0089 Score=64.64 Aligned_cols=142 Identities=17% Similarity=0.179 Sum_probs=81.1
Q ss_pred CcccccCceEEEEEEecCCCcEEEEEeeecc-ccHHHHHHHHHHHHhcCCCc--eeeEEEE-----EEeCCeeEEEEEcc
Q 002061 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRN--ILKLYAC-----LLKGGSSFLVLEYM 753 (973)
Q Consensus 682 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpn--iv~l~~~-----~~~~~~~~lv~e~~ 753 (973)
..++ |....||+....+ |+.+++|+.... .....+..|..+++.+.... +.+++.. ...++..+++|||+
T Consensus 32 ~~l~-g~~n~~y~v~~~~-g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDED-RRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EEEC-CSSSEEEEECCTT-CCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred Eeec-CcccceEEEEcCC-CCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 3466 8888999886643 667999987643 34566778888888774222 3333332 22355678999999
Q ss_pred CCCchH-----H------H---HHhhhcC----CCCCCCHHHH----------------------HHHHHHHHHHHhhhh
Q 002061 754 PNGNLF-----Q------A---LHKRVKE----GKPELDWFRR----------------------YKIALGAAKGIAYLH 793 (973)
Q Consensus 754 ~~gsL~-----~------~---l~~~~~~----~~~~~~~~~~----------------------~~i~~~ia~~l~~LH 793 (973)
+|..+. . . ++..... ..+..++... ...+.+++..++-.-
T Consensus 110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (328)
T 1zyl_A 110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW 189 (328)
T ss_dssp CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 876542 1 1 1211110 0112222211 011111111122111
Q ss_pred h-cCCCCeEecCCCCCCeeecCCCCeEEecccCcc
Q 002061 794 H-DCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 794 ~-~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
. .....++|+|+++.||+++ + .+.+.||+.+.
T Consensus 190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 0 1145689999999999999 4 89999999775
No 436
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.64 E-value=0.0036 Score=70.51 Aligned_cols=73 Identities=21% Similarity=0.310 Sum_probs=49.6
Q ss_pred CcccccCceEEEEEEecC-------CCcEEEEEeeeccccHHHHHHHHHHHHhcCCCce-eeEEEEEEeCCeeEEEEEcc
Q 002061 682 NLIGSGGTGKVYRLDLKK-------NAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNI-LKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 682 ~~lG~G~~g~V~~a~~~~-------~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpni-v~l~~~~~~~~~~~lv~e~~ 753 (973)
+.|+.|....||++.... .++.+++|+.........+.+|..+++.+...++ .++++.+.. .+||||+
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e~l 154 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEYI 154 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECCC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEEEe
Confidence 467888899999998753 2568999987442222556689999988853333 455655432 3899999
Q ss_pred CCCch
Q 002061 754 PNGNL 758 (973)
Q Consensus 754 ~~gsL 758 (973)
+|.++
T Consensus 155 ~G~~l 159 (429)
T 1nw1_A 155 PSRPL 159 (429)
T ss_dssp CEEEC
T ss_pred CCccc
Confidence 86444
No 437
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.64 E-value=0.0064 Score=65.59 Aligned_cols=145 Identities=14% Similarity=0.125 Sum_probs=79.8
Q ss_pred cCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhcCCCc--eeeEEE------EEEeCCeeEEEEEc
Q 002061 681 DNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRN--ILKLYA------CLLKGGSSFLVLEY 752 (973)
Q Consensus 681 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpn--iv~l~~------~~~~~~~~~lv~e~ 752 (973)
.+.|+.|....+|+....+ ..+++|+.........+..|+.+++.+.... +.+++. +...++..+++|+|
T Consensus 27 ~~~i~~G~~n~~~~v~~~~--g~~vlk~~~~~~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~ 104 (322)
T 2ppq_A 27 YKGIAEGVENSNFLLHTTK--DPLILTLYEKRVEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF 104 (322)
T ss_dssp EEEECC---EEEEEEEESS--CCEEEEEECC---CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred eeccCCCcccceEEEEeCC--ccEEEEEeCCCCCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence 3557788889999998653 3788998765333445677888887764212 222221 11234567899999
Q ss_pred cCCCchHH--------------HHHhhhcC-CCCC------CCHHHHHH------------HHHHHHHHHhhhhhc----
Q 002061 753 MPNGNLFQ--------------ALHKRVKE-GKPE------LDWFRRYK------------IALGAAKGIAYLHHD---- 795 (973)
Q Consensus 753 ~~~gsL~~--------------~l~~~~~~-~~~~------~~~~~~~~------------i~~~ia~~l~~LH~~---- 795 (973)
++|..+.. .++..... ..+. ..|..... +...+.+.+++++..
T Consensus 105 l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~ 184 (322)
T 2ppq_A 105 LEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKD 184 (322)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCS
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCccc
Confidence 98865311 12221100 0000 11322110 001133344444421
Q ss_pred CCCCeEecCCCCCCeeecCCCCeEEecccCcc
Q 002061 796 CSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 796 ~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
...+++|+|+.+.||++++++.+.+.||+.+.
T Consensus 185 ~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 185 LPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp SCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 13579999999999999987666899999764
No 438
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.35 E-value=0.023 Score=55.86 Aligned_cols=103 Identities=15% Similarity=0.135 Sum_probs=66.8
Q ss_pred CchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCCCeeecCCCCeEEecccCcccccCCCCc
Q 002061 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
-+|.+.|..+ +.++++++++.++.|.+.+|.-.-.. ..-..+=+.|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~~~----~~PlsEEqaWALc~Qc~~~L~~~~~~--~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~-------- 97 (229)
T 2yle_A 33 LSLEEILRLY----NQPINEEQAWAVCYQCCGSLRAAARR--RQPRHRVRSAAQIRVWRDGAVTLAP-AADD-------- 97 (229)
T ss_dssp EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCSGGGEEEETTSCEEECC-C-----------
T ss_pred ccHHHHHHHc----CCCcCHHHHHHHHHHHHHHHHhhhhc--ccCCceecCCcceEEecCCceeccc-cccc--------
Confidence 3899999876 56799999999999999988776211 1111233446889999999887764 1110
Q ss_pred ccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCC
Q 002061 836 SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKP 880 (973)
Q Consensus 836 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~p 880 (973)
.....+.|||... ...+.+.=|||+|+++|.-+-=..|
T Consensus 98 ------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ---------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1123466888763 3456788999999999998864343
No 439
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.35 E-value=0.0085 Score=65.84 Aligned_cols=142 Identities=18% Similarity=0.199 Sum_probs=81.7
Q ss_pred CcccccCceEEEEEEecC-------CCcEEEEEeeec-cccHHHHHHHHHHHHhcCCCc-eeeEEEEEEeCCeeEEEEEc
Q 002061 682 NLIGSGGTGKVYRLDLKK-------NAGTVAVKQLWK-GDGVKVFAAEMEILGKIRHRN-ILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 682 ~~lG~G~~g~V~~a~~~~-------~~~~vavK~~~~-~~~~~~~~~E~~~l~~l~hpn-iv~l~~~~~~~~~~~lv~e~ 752 (973)
+.+..|-...+|+..... +++.|++|+... ........+|.++++.+.-.+ ..++++++.+ .+||||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~ 131 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQY 131 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEEC
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEE
Confidence 457778888899988752 357899998633 124556678999998884222 2455555443 289999
Q ss_pred cCCCchHH--------------HH---HhhhcCCCCCCC--HHHHHHHHHHHHH-------------------HHhhhh-
Q 002061 753 MPNGNLFQ--------------AL---HKRVKEGKPELD--WFRRYKIALGAAK-------------------GIAYLH- 793 (973)
Q Consensus 753 ~~~gsL~~--------------~l---~~~~~~~~~~~~--~~~~~~i~~~ia~-------------------~l~~LH- 793 (973)
++|.++.. .+ +........... |.++.++..++.. .++.+.
T Consensus 132 i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 211 (379)
T 3feg_A 132 IPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRK 211 (379)
T ss_dssp CSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHH
T ss_pred ecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHH
Confidence 99866531 11 111000011122 3444444443321 122222
Q ss_pred ---h-cCCCCeEecCCCCCCeeecCC----CCeEEecccCcc
Q 002061 794 ---H-DCSPPIIHRDIKSSNILLDED----YEPKIADFGVAK 827 (973)
Q Consensus 794 ---~-~~~~~ivH~Dlkp~Nill~~~----~~~kl~Dfgl~~ 827 (973)
. .....++|+|+.+.||+++.+ +.+.+.||..+.
T Consensus 212 ~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 212 LLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 1 113468999999999999876 789999999875
No 440
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.30 E-value=0.0075 Score=55.14 Aligned_cols=56 Identities=27% Similarity=0.395 Sum_probs=31.0
Q ss_pred EEEcccCCCC-CCCChhhhcCCCCCEEEccCCcCCCCccccccccccCCEEEcCCcccc
Q 002061 437 QLVLQNNRFS-GELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALT 494 (973)
Q Consensus 437 ~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 494 (973)
.++.+++.++ ..+|..+ -++|+.|+|++|+|+.+.+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4455555554 1233222 124666666666666555556666666666777766654
No 441
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.11 E-value=0.023 Score=61.51 Aligned_cols=143 Identities=14% Similarity=0.149 Sum_probs=72.2
Q ss_pred CcccccCceE-EEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhcCCC--ceeeEEEEEEeCCeeEEEEEccCCCch
Q 002061 682 NLIGSGGTGK-VYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHR--NILKLYACLLKGGSSFLVLEYMPNGNL 758 (973)
Q Consensus 682 ~~lG~G~~g~-V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp--niv~l~~~~~~~~~~~lv~e~~~~gsL 758 (973)
+.|+.|+... +|+.... +++.+++|...... ...+..|+.+++.+... .+.+++.+....+ +++||++.+..+
T Consensus 24 ~~l~gg~s~~~~~r~~~~-~~~~~vlk~~~~~~-~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~l 99 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSP-TGAKAVLMDWSPEE-GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDALF 99 (333)
T ss_dssp CC--------CCEEEECT-TCCEEEEEECCTTT-TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCBH
T ss_pred eECCCCCCCceEEEEEcC-CCCeEEEEECCCCC-CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcch
Confidence 4566665554 6676542 25577777644321 13345677777776422 2345555533333 789999977676
Q ss_pred HHHHHhhhc-----------------C----CCCCCCHHHHH-------H-H------------HHHHHHHHhhhh---h
Q 002061 759 FQALHKRVK-----------------E----GKPELDWFRRY-------K-I------------ALGAAKGIAYLH---H 794 (973)
Q Consensus 759 ~~~l~~~~~-----------------~----~~~~~~~~~~~-------~-i------------~~~ia~~l~~LH---~ 794 (973)
.+++..... . ..+.++..... . + ...+...++.+. .
T Consensus 100 ~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~ 179 (333)
T 3csv_A 100 TEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQL 179 (333)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 654432100 0 01112211100 0 0 001111222221 1
Q ss_pred cCCCCeEecCCCCCCeeecCC----CCeEEecccCccc
Q 002061 795 DCSPPIIHRDIKSSNILLDED----YEPKIADFGVAKI 828 (973)
Q Consensus 795 ~~~~~ivH~Dlkp~Nill~~~----~~~kl~Dfgl~~~ 828 (973)
.....++|||+.+.||+++.+ +.+.+.||+.+..
T Consensus 180 ~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 180 EGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred cCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 114679999999999999875 6789999998863
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=95.94 E-value=0.017 Score=65.19 Aligned_cols=74 Identities=16% Similarity=0.139 Sum_probs=48.1
Q ss_pred cCcccccCceEEEEEEecCCCcEEEEEeeeccc-cHHHHHHHHHHHHhcCCCce-eeEEEEEEeCCeeEEEEEccCCCch
Q 002061 681 DNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-GVKVFAAEMEILGKIRHRNI-LKLYACLLKGGSSFLVLEYMPNGNL 758 (973)
Q Consensus 681 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~hpni-v~l~~~~~~~~~~~lv~e~~~~gsL 758 (973)
.+.|+.|-...+|++.....+..+++|+..... ..-...+|..+++.+...++ .++++++. + .+||||++|.++
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 356888999999999876545789999764321 11122589999998865444 35666552 2 359999987555
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.66 E-value=0.013 Score=64.45 Aligned_cols=73 Identities=19% Similarity=0.181 Sum_probs=43.7
Q ss_pred CcccccCceEEEEEEecC--------CCcEEEEEeeeccc-cHHHHHHHHHHHHhcCCCce-eeEEEEEEeCCeeEEEEE
Q 002061 682 NLIGSGGTGKVYRLDLKK--------NAGTVAVKQLWKGD-GVKVFAAEMEILGKIRHRNI-LKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 682 ~~lG~G~~g~V~~a~~~~--------~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~hpni-v~l~~~~~~~~~~~lv~e 751 (973)
+.++.|....+|+..... .++.+++|+..... ......+|.++++.+...++ .++++.. + -++|||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~e 114 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIEE 114 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEEE
Confidence 457888889999998753 12688899765422 11124678888888743333 3555543 2 268999
Q ss_pred ccCCCch
Q 002061 752 YMPNGNL 758 (973)
Q Consensus 752 ~~~~gsL 758 (973)
|++|.++
T Consensus 115 ~i~G~~l 121 (369)
T 3c5i_A 115 WLYGDPL 121 (369)
T ss_dssp CCCSEEC
T ss_pred EecCCcC
Confidence 9987544
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=94.95 E-value=0.082 Score=57.24 Aligned_cols=68 Identities=10% Similarity=0.120 Sum_probs=43.7
Q ss_pred cccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhcC---CCceeeEEEE------EEeCCeeEEEEEccCC
Q 002061 685 GSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIR---HRNILKLYAC------LLKGGSSFLVLEYMPN 755 (973)
Q Consensus 685 G~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~---hpniv~l~~~------~~~~~~~~lv~e~~~~ 755 (973)
|.|....||+....+ | .+++|+...... .+|+.+++.+. -|.+.+++.. ...++..+++|||++|
T Consensus 32 G~g~~N~vy~v~~~~-g-~~vLK~~~~~~~----~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G 105 (339)
T 3i1a_A 32 GADTNAFAYQADSES-K-SYFIKLKYGYHD----EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHA 105 (339)
T ss_dssp TSCSSCEEEEEECSS-C-EEEEEEEECSSC----CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCC
T ss_pred cCccccceEEEEeCC-C-CEEEEEecCccc----hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCC
Confidence 445578999998654 4 899997655331 45666666653 1224444432 2345678999999998
Q ss_pred Cch
Q 002061 756 GNL 758 (973)
Q Consensus 756 gsL 758 (973)
..+
T Consensus 106 ~~~ 108 (339)
T 3i1a_A 106 PNG 108 (339)
T ss_dssp CBT
T ss_pred CcC
Confidence 765
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.08 E-value=0.34 Score=53.25 Aligned_cols=142 Identities=18% Similarity=0.192 Sum_probs=79.7
Q ss_pred CcccccCceEEEEEEecC-------CCcEEEEEeeecccc--------------------HHHHHHHHHHHHhcCCCc-e
Q 002061 682 NLIGSGGTGKVYRLDLKK-------NAGTVAVKQLWKGDG--------------------VKVFAAEMEILGKIRHRN-I 733 (973)
Q Consensus 682 ~~lG~G~~g~V~~a~~~~-------~~~~vavK~~~~~~~--------------------~~~~~~E~~~l~~l~hpn-i 733 (973)
+.|..|-...+|++.... .+..|.+++.-...+ .+....|..+++.+...+ .
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456677888899988753 136788887643211 011224888888875333 4
Q ss_pred eeEEEEEEeCCeeEEEEEccCCCchHH--------------HH---HhhhcCCCCCCC--HHHHHHHHHHHH--------
Q 002061 734 LKLYACLLKGGSSFLVLEYMPNGNLFQ--------------AL---HKRVKEGKPELD--WFRRYKIALGAA-------- 786 (973)
Q Consensus 734 v~l~~~~~~~~~~~lv~e~~~~gsL~~--------------~l---~~~~~~~~~~~~--~~~~~~i~~~ia-------- 786 (973)
.++++++..+ +|+||++|.+|.. .+ +........... |....++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 4566665432 8999998755421 11 110001111222 223333333221
Q ss_pred --------------HHH----hhhhh-cCCCCeEecCCCCCCeeecCC------CCeEEecccCcc
Q 002061 787 --------------KGI----AYLHH-DCSPPIIHRDIKSSNILLDED------YEPKIADFGVAK 827 (973)
Q Consensus 787 --------------~~l----~~LH~-~~~~~ivH~Dlkp~Nill~~~------~~~kl~Dfgl~~ 827 (973)
..+ +++.. .....++|+|+.+.||+++.+ +.+.+.||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 111 12221 124568899999999999887 789999999875
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=92.25 E-value=0.37 Score=53.53 Aligned_cols=73 Identities=15% Similarity=0.151 Sum_probs=46.6
Q ss_pred CcccccCceEEEEEEecCC-------CcEEEEEeeecc-ccHHHHHHHHHHHHhcCCCce-eeEEEEEEeCCeeEEEEEc
Q 002061 682 NLIGSGGTGKVYRLDLKKN-------AGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNI-LKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 682 ~~lG~G~~g~V~~a~~~~~-------~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpni-v~l~~~~~~~~~~~lv~e~ 752 (973)
+.+..|-...+|+...... ++.|++|+.... ...-...+|.++++.+.-.++ .++++.+ . -++||||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~ef 151 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEEF 151 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEEC
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEEE
Confidence 4567788889999887631 468999976432 111224678888888843233 3444432 2 2789999
Q ss_pred cCCCch
Q 002061 753 MPNGNL 758 (973)
Q Consensus 753 ~~~gsL 758 (973)
++|..+
T Consensus 152 I~G~~l 157 (424)
T 3mes_A 152 IDGEPL 157 (424)
T ss_dssp CCSEEC
T ss_pred eCCccC
Confidence 998764
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=86.59 E-value=1.5 Score=48.34 Aligned_cols=29 Identities=31% Similarity=0.453 Sum_probs=24.7
Q ss_pred CeEecCCCCCCeee------cCCCCeEEecccCcc
Q 002061 799 PIIHRDIKSSNILL------DEDYEPKIADFGVAK 827 (973)
Q Consensus 799 ~ivH~Dlkp~Nill------~~~~~~kl~Dfgl~~ 827 (973)
.++|+|+.+.||++ +++..+.+.||.+|.
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 36799999999999 446679999999886
No 448
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=76.80 E-value=0.33 Score=54.82 Aligned_cols=60 Identities=8% Similarity=-0.041 Sum_probs=18.2
Q ss_pred cccCcccccCceEEEEEEecCCCcEEEE------Eeeec----cccHHHHHHHHHHHHhcCCCceeeEEEEEE
Q 002061 679 EEDNLIGSGGTGKVYRLDLKKNAGTVAV------KQLWK----GDGVKVFAAEMEILGKIRHRNILKLYACLL 741 (973)
Q Consensus 679 ~~~~~lG~G~~g~V~~a~~~~~~~~vav------K~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~ 741 (973)
.+.+.+| ||+||+|.+......||| |.... .+....+.+|..+++..+|||+++.+++..
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 3455676 999999999865568888 65543 123345778899999999999999987754
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=76.36 E-value=10 Score=37.28 Aligned_cols=116 Identities=14% Similarity=0.143 Sum_probs=78.1
Q ss_pred CCCceeeEEEEEEeCCeeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHh-hhhhcCCCCeEecCCCC
Q 002061 729 RHRNILKLYACLLKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIA-YLHHDCSPPIIHRDIKS 807 (973)
Q Consensus 729 ~hpniv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~-~LH~~~~~~ivH~Dlkp 807 (973)
.||++ -...-.+++.+.+.++.-+++-=+..++ ..+...+++++..++.... +++ .-+|--+.|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~--------~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P 112 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR--------KTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCP 112 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH--------TSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH--------hcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeC
Confidence 67888 4444467777777777654443334443 3678889999999988777 665 357888999
Q ss_pred CCeeecCCCCeEEecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCc
Q 002061 808 SNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEE 883 (973)
Q Consensus 808 ~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~ 883 (973)
+|++++.++.+++.-.|+-..+ +|.-+ ++.-=.-.+=|++..++.++..|+.
T Consensus 113 ~NL~f~~~~~p~i~hRGi~~~l-------------------pP~e~-----~ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVKESL-------------------PPDEW-----DDERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp GGEEECTTCCEEESCCEETTTB-------------------SSCSC-----CHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred ceEEEeCCCcEEEEEcCCcccC-------------------CCCCC-----CHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 9999999999999977754322 22211 1111122456777888888888754
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=68.84 E-value=8.7 Score=37.65 Aligned_cols=118 Identities=9% Similarity=0.068 Sum_probs=78.8
Q ss_pred CCCceeeEEEEEEeCCeeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeEecCCCCC
Q 002061 729 RHRNILKLYACLLKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSS 808 (973)
Q Consensus 729 ~hpniv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~ 808 (973)
.||+.++. .+-..++.+.+.|+.-+.+-=+..++ ..+...+++++..|+....++++ =+|--+.|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik--------~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~ 108 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK--------SFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPD 108 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG--------GSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH--------hcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecc
Confidence 68888876 45566666666666543221111122 36788999999999988877762 378899999
Q ss_pred CeeecCCCCeEEecccCcccccCCCCcccccccCCccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcc
Q 002061 809 NILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEE 884 (973)
Q Consensus 809 Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el~tg~~pf~~~ 884 (973)
|++++.++.+++.-.|+...+ +|.. .++..=.-.+=+++..+++++..|+.-
T Consensus 109 NL~f~~~~~p~i~~RGik~~l-------------------~P~~-----~~ee~fL~qyKAliiall~~K~~Fe~l 160 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGLQNVV-------------------DPLP-----VSEAEFLTRYKALVICAFNEKQSFDAL 160 (215)
T ss_dssp GEEECTTSCEEESCCEETTTB-------------------SCCC-----CCHHHHHHHHHHHHHHHHCTTCCHHHH
T ss_pred eEEEcCCCCEEEEEccCccCC-------------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 999999999999877754322 2221 111122334667888999999998653
No 451
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=44.07 E-value=2.6e+02 Score=31.92 Aligned_cols=86 Identities=17% Similarity=0.135 Sum_probs=50.8
Q ss_pred eeEEEEEEeCCeeEEEEEccCCCchHHHH----------HhhhcCCCCC--CCHHHHHHHHHHHH--HHHhhhhhcCCCC
Q 002061 734 LKLYACLLKGGSSFLVLEYMPNGNLFQAL----------HKRVKEGKPE--LDWFRRYKIALGAA--KGIAYLHHDCSPP 799 (973)
Q Consensus 734 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l----------~~~~~~~~~~--~~~~~~~~i~~~ia--~~l~~LH~~~~~~ 799 (973)
+..|.+........+ .|++++.++.+.+ .+........ ..+..+..++...| +.+.|+= |
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YIL-----G 475 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYIL-----G 475 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHH-----T
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheee-----e
Confidence 344555555444444 4777765555444 3332221111 23555555555554 3455554 2
Q ss_pred eEecCCCCCCeeecCCCCeEEecccCcc
Q 002061 800 IIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 800 ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
-+|=.++|||++.+|++.=+|||.+-
T Consensus 476 --igDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 476 --VGDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp --CCCCCTTSEEECTTSCEEECCCSSCT
T ss_pred --ccCCCCcceeEcCCCCEeeeehHHhh
Confidence 25667999999999999999999873
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=34.11 E-value=34 Score=28.85 Aligned_cols=47 Identities=17% Similarity=0.173 Sum_probs=28.0
Q ss_pred ccccCCCccccccccccchhccccccccCCCccccccCCCCeeecCCC
Q 002061 492 ALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGN 539 (973)
Q Consensus 492 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 539 (973)
.++.+-..+|.++.+|+.+.+-.+ ++.+-..+|.++.+|+.+.+.+.
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 344445556666666666666654 44355566777777777776543
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=33.27 E-value=60 Score=27.29 Aligned_cols=42 Identities=12% Similarity=0.142 Sum_probs=19.6
Q ss_pred CccccccccccCCEEEcCCcccccCCCccccccccccchhccc
Q 002061 472 KIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLAR 514 (973)
Q Consensus 472 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 514 (973)
+-..+|.++.+|+.+.+-.+ ++.+-..+|.++.+|+.+.+..
T Consensus 11 I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 11 MDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp SCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33344445555555554443 2223344555555555555443
No 454
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=31.21 E-value=2.1e+02 Score=33.36 Aligned_cols=85 Identities=19% Similarity=0.125 Sum_probs=47.9
Q ss_pred eEEEEEEeCCeeEEEEEccCCCchHHHHHh----------hhcCCCCCC--CHHHHHHHHHHHH--HHHhhhhhcCCCCe
Q 002061 735 KLYACLLKGGSSFLVLEYMPNGNLFQALHK----------RVKEGKPEL--DWFRRYKIALGAA--KGIAYLHHDCSPPI 800 (973)
Q Consensus 735 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~----------~~~~~~~~~--~~~~~~~i~~~ia--~~l~~LH~~~~~~i 800 (973)
+.|.+........+ .|+++..++.+.+.. ........+ ....+..++..+| +.+.|+= |
T Consensus 477 ~~Y~Vipls~~~GL-IE~V~s~tl~~i~~~~~~l~~~f~~~~p~~~~~~~~~~~ar~nF~~SlA~~Svv~YIL-----G- 549 (696)
T 2x6h_A 477 TPYKVLATSSKHGF-LQYVDSCTVAEVLAREGNIHNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYLL-----G- 549 (696)
T ss_dssp CCCCEEESSTTCEE-EECCCCEEHHHHHHHSSSHHHHHHHHSBCTTSSSSBCHHHHHHHHHHHHHHHHHHHHH-----T-
T ss_pred eccEEEeccCCCCe-eeeCCCccHHHHHHhcChHHHHHHHHCCCccchhhhHHHHHHHHHHHHHHHHHHHHHc-----c-
Confidence 33444444444443 377666566555433 211111111 1234445555543 2344444 1
Q ss_pred EecCCCCCCeeecCCCCeEEecccCcc
Q 002061 801 IHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 801 vH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
=+|=.++|||++.+|++.-+|||.+-
T Consensus 550 -lGDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 550 -VGDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp -CCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred -CCCCCCcceEEeCCCCEEEEeehhhh
Confidence 26888999999999999999999864
No 455
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=28.33 E-value=18 Score=20.17 Aligned_cols=10 Identities=30% Similarity=0.999 Sum_probs=7.6
Q ss_pred CCCCCcceee
Q 002061 58 DSPCGFSGIT 67 (973)
Q Consensus 58 ~~~c~w~gv~ 67 (973)
|-.|+|+|..
T Consensus 5 dgacswrgle 14 (23)
T 3ox7_P 5 DGACSWRGLE 14 (26)
T ss_pred Ccccccccch
Confidence 4469999975
No 456
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=24.34 E-value=68 Score=22.39 Aligned_cols=8 Identities=0% Similarity=0.380 Sum_probs=3.6
Q ss_pred hhHHHHHH
Q 002061 620 LFCIIAVA 627 (973)
Q Consensus 620 ~~~~~~~~ 627 (973)
..+++|+.
T Consensus 15 a~~vVGvl 22 (44)
T 2jwa_A 15 ISAVVGIL 22 (44)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 34445533
No 457
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=23.09 E-value=71 Score=21.49 Aligned_cols=9 Identities=22% Similarity=0.309 Sum_probs=3.6
Q ss_pred hHHHHHHHH
Q 002061 621 FCIIAVALA 629 (973)
Q Consensus 621 ~~~~~~~~~ 629 (973)
-+++++.++
T Consensus 15 GiVvG~v~g 23 (38)
T 2k1k_A 15 AVIFGLLLG 23 (38)
T ss_dssp HHHHHHHHH
T ss_pred eeehHHHHH
Confidence 344444433
No 458
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=20.73 E-value=2e+02 Score=30.04 Aligned_cols=140 Identities=13% Similarity=0.113 Sum_probs=66.7
Q ss_pred CCcccCcccccCceEEEEEEecCCCcEEEEEeeeccccHHHHHHHHHHHHhcCCCceeeEEEE-----------------
Q 002061 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYAC----------------- 739 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~----------------- 739 (973)
+++.++..-.|..| ||.+.. ++..|+||-. ..-..+.+..++...=.+.-|...-+...
T Consensus 70 ~v~~I~~s~~Gstg-vff~~t--d~~~~VVK~s-~~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~ 145 (342)
T 1cja_A 70 QFKGIERSEKGTEG-LFFVET--ESGVFIVKRS-TNIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKS 145 (342)
T ss_dssp GEEEEEECCSTTSC-EEEEEE--SSCEEEEECC-TTHHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSS
T ss_pred CeeEEEeccCCCCC-eEEEEe--CCCEEEEeCc-HHHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhh
Confidence 34555555666655 554444 3678999944 22222223333333333444443322111
Q ss_pred E-----EeCCeeEEEEEccCCCchHHHHHhhhcCCCCCCCHHHHHHHHHHH--HHHHhhhh-hcCCCCeEe-cCCCCCCe
Q 002061 740 L-----LKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGA--AKGIAYLH-HDCSPPIIH-RDIKSSNI 810 (973)
Q Consensus 740 ~-----~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i--a~~l~~LH-~~~~~~ivH-~Dlkp~Ni 810 (973)
. ......+++|||.+|..|...-.... ...+.... +.++ .-+++.+. ..+..+.+. .--.+.||
T Consensus 146 ~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~---~~~f~~~~----~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NI 218 (342)
T 1cja_A 146 FRVITTLANQANILLMELVRGITLNKLTTTSA---PEVLTKST----MQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNI 218 (342)
T ss_dssp SCHHHHHTTCSEEEEEECCCEEESTTCCSSSH---HHHSCHHH----HHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGE
T ss_pred hHHHHHhhcccceehhhhcCCCccccchhhhh---hhhcCHHH----HHhhchhheehhhhcCCccCcccccCCCChhhe
Confidence 0 01224569999998766543211000 00122222 2222 22334443 332222222 22578999
Q ss_pred eecCCCC-eEEecccCcc
Q 002061 811 LLDEDYE-PKIADFGVAK 827 (973)
Q Consensus 811 ll~~~~~-~kl~Dfgl~~ 827 (973)
|++.++. +.+.|-+.+.
T Consensus 219 L~~~~n~~~~~IDhn~af 236 (342)
T 1cja_A 219 MLSERGATVVPIDSKIIP 236 (342)
T ss_dssp EEESBTTCEEECSCCCCC
T ss_pred EEeCCCCeEEEEcCCccc
Confidence 9987555 8888988875
Done!