Query 002062
Match_columns 973
No_of_seqs 325 out of 1289
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 10:45:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002062.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002062hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ayd_A WRKY transcription fact 91.8 0.48 1.6E-05 41.2 7.5 30 267-296 43-74 (76)
2 1wj2_A Probable WRKY transcrip 90.4 0.36 1.2E-05 42.1 5.4 29 267-295 46-76 (78)
3 2rpr_A Flywch-type zinc finger 76.5 3.3 0.00011 36.5 5.3 24 268-296 51-74 (87)
4 3kks_A Integrase, IN; beta-str 69.6 13 0.00046 34.6 8.2 66 405-480 2-67 (152)
5 3hph_A Integrase, IN; protein- 44.9 52 0.0018 33.0 8.0 66 406-481 61-126 (219)
6 1cxq_A Avian sarcoma virus int 39.7 1.1E+02 0.0036 29.0 9.0 71 405-480 11-81 (162)
7 3l3u_A POL polyprotein; DNA in 39.4 69 0.0024 30.2 7.6 64 405-478 9-72 (163)
8 1c0m_A Protein (integrase); HI 39.2 82 0.0028 32.2 8.6 71 405-480 10-80 (238)
9 3hot_A Transposable element ma 29.0 2.3E+02 0.0077 30.3 10.4 56 418-476 186-252 (345)
10 2x78_A Integrase; viral protei 27.1 1.6E+02 0.0053 28.7 8.0 70 405-480 13-83 (200)
11 3av9_A Integrase, IN; protein- 26.9 1.4E+02 0.0047 28.9 7.5 66 405-480 29-94 (183)
12 1bco_A MUA domain II, bacterio 26.9 1.3E+02 0.0044 32.4 7.9 72 404-478 15-94 (327)
13 1c6v_A Protein (SIV integrase) 20.8 2.4E+02 0.0084 25.9 7.7 63 405-477 9-71 (164)
No 1
>2ayd_A WRKY transcription factor 1; beta strands, zinc finger; 1.60A {Arabidopsis thaliana}
Probab=91.83 E-value=0.48 Score=41.19 Aligned_cols=30 Identities=23% Similarity=0.553 Sum_probs=26.0
Q ss_pred cCCcceEEEEEe--cceEEEEEeecCCCCCCC
Q 002062 267 TGCDAMVEFTVE--NGKWMISGFTPEHNHDLE 296 (973)
Q Consensus 267 tgCpA~m~vk~~--~gkW~V~~f~~eHNH~L~ 296 (973)
.||||+=.|.+. +....++.+..+|||++.
T Consensus 43 ~gC~a~K~Ver~~~d~~~~~~tY~G~H~H~~p 74 (76)
T 2ayd_A 43 PGCPVKKHVERSSHDTKLLITTYEGKHDHDMP 74 (76)
T ss_dssp TTCCCEEEEEECSSSTTEEEEEEESCCSSCCC
T ss_pred CCCCceeeEEEECCCCCEEEEEEccCcCCCCC
Confidence 379999999987 667889999999999873
No 2
>1wj2_A Probable WRKY transcription factor 4; DNA-binding domain, zinc-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.79.1.1 PDB: 2lex_A*
Probab=90.42 E-value=0.36 Score=42.10 Aligned_cols=29 Identities=28% Similarity=0.550 Sum_probs=25.5
Q ss_pred cCCcceEEEEEe--cceEEEEEeecCCCCCC
Q 002062 267 TGCDAMVEFTVE--NGKWMISGFTPEHNHDL 295 (973)
Q Consensus 267 tgCpA~m~vk~~--~gkW~V~~f~~eHNH~L 295 (973)
.||+|+=.|.+. +....++.+..+|||++
T Consensus 46 ~gC~a~K~Ver~~~d~~~~~~tY~G~H~H~~ 76 (78)
T 1wj2_A 46 PGCGVRKHVERAATDPKAVVTTYEGKHNHDL 76 (78)
T ss_dssp SSCEEEEEEEEETTTTSEEEEEEESCCSSCC
T ss_pred CCCCcEeeEEEEcCCCCEEEEEEeeEcCCCC
Confidence 479999999987 67788889999999987
No 3
>2rpr_A Flywch-type zinc finger-containing protein 1; flywch domain, alternative splicing, DNA-binding, metal- binding, nucleus, metal binding protein; NMR {Homo sapiens}
Probab=76.47 E-value=3.3 Score=36.53 Aligned_cols=24 Identities=21% Similarity=0.361 Sum_probs=16.6
Q ss_pred CCcceEEEEEecceEEEEEeecCCCCCCC
Q 002062 268 GCDAMVEFTVENGKWMISGFTPEHNHDLE 296 (973)
Q Consensus 268 gCpA~m~vk~~~gkW~V~~f~~eHNH~L~ 296 (973)
+|+|++.... + . |. +...||||+.
T Consensus 51 kCrARi~T~~-~-~--~~-~~~~HnH~p~ 74 (87)
T 2rpr_A 51 GCRSRAITQG-H-R--IM-VMRSHCHQPD 74 (87)
T ss_dssp CCCCEEEEET-T-E--EE-ECSCCSSCCC
T ss_pred CCCEEEEEcC-C-C--EE-CCCCcCCCCc
Confidence 6999987653 2 2 32 5678999874
No 4
>3kks_A Integrase, IN; beta-strands flanked by alpha-helices, DNA binding protein; 2.20A {Bovine immunodeficiency virus} PDB: 3kkr_A
Probab=69.56 E-value=13 Score=34.56 Aligned_cols=66 Identities=6% Similarity=0.086 Sum_probs=47.8
Q ss_pred CcEEEEeeeeeeccCCccccceeeeecCcceeEEEEEEecCCchhhHHHHHHHHHhhhCCCCCcEEecCCchHHHH
Q 002062 405 GDVVILDTTFRIEANNMIYAPFLGLNHHRQYVLFGGAFLLDDSKDSFIWLLRTFLDSMGRRQPSTIFTDGYQAMAD 480 (973)
Q Consensus 405 gDVV~~DtTy~tNky~~pL~~fvGvn~~gq~~~fg~ALl~dEt~esf~Wlf~~fl~~m~~~~P~tIITD~d~am~~ 480 (973)
++++.+|.|+..++ +.++.+|..-+.+ +++.+ .+++.+...-+|..+....| |++|.||+......
T Consensus 2 n~~w~~D~t~~~~~-----y~~~~iD~~sr~~-~~~~~-~~~~~~~~~~~l~~~~~~~g---p~~i~sDnG~~f~s 67 (152)
T 3kks_A 2 SHLWQMDNTHWNKT-----IIWVAVETNSGLV-EAQVI-PEETALQVALCILQLIQRYT---VLHLHSDNGPCFTA 67 (152)
T ss_dssp CCEEEEEEEEETTE-----EEEEEEETTTCCE-EEEEE-SSSCHHHHHHHHHHHHHHSC---CSEEEECSCHHHHS
T ss_pred CcEEEEeeeeeCCE-----EEEEEEEcCCCcE-EEEEe-CCcCHHHHHHHHHHHHHHhC---CcEEecCCchHhhH
Confidence 46788999988443 5667778777665 55544 57777777777766666655 99999999887754
No 5
>3hph_A Integrase, IN; protein-protein complex, tetramer, DNA integration, endonucl magnesium, metal-binding, multifunctional enzyme; 2.64A {Maedi visna virus} PDB: 3hpg_A
Probab=44.87 E-value=52 Score=32.98 Aligned_cols=66 Identities=11% Similarity=0.155 Sum_probs=46.0
Q ss_pred cEEEEeeeeeeccCCccccceeeeecCcceeEEEEEEecCCchhhHHHHHHHHHhhhCCCCCcEEecCCchHHHHH
Q 002062 406 DVVILDTTFRIEANNMIYAPFLGLNHHRQYVLFGGAFLLDDSKDSFIWLLRTFLDSMGRRQPSTIFTDGYQAMADA 481 (973)
Q Consensus 406 DVV~~DtTy~tNky~~pL~~fvGvn~~gq~~~fg~ALl~dEt~esf~Wlf~~fl~~m~~~~P~tIITD~d~am~~A 481 (973)
+++.+|.|+..++ +.++.+|..-+.+ ++.. +.+.+.....-+|..+....| |.+|.||+.......
T Consensus 61 ~~w~~D~t~~~~~-----y~~~~iD~~Sr~~-~~~~-~~~~~~~~~~~~l~~~~~~~g---p~~i~sDnG~~F~s~ 126 (219)
T 3hph_A 61 DHWQVDYTHYEDK-----IILVWVETNSGLI-YAER-VKGETGQEFRVQTMKWYAMFA---PKSLQSDNGPAFVAE 126 (219)
T ss_dssp CEEEEEEEEETTE-----EEEEEEETTTCCE-EEEE-ESCCCHHHHHHHHHHHHHHHC---CCEEEECCCHHHHSH
T ss_pred ceEEEEEecCCCE-----EEEEEEeCCCCcE-EEEE-eCCCCHHHHHHHHHHHHHHhC---CcEEEeCCCchhhhH
Confidence 5677888876543 4567778777766 4444 566777776666666665554 999999999877543
No 6
>1cxq_A Avian sarcoma virus integrase; mixed beta-sheet surrounded by alpha-helices, transferase; HET: EPE; 1.02A {Avian sarcoma virus} SCOP: c.55.3.2 PDB: 1cxu_A* 1czb_A* 1cz9_A* 1asu_A* 1asw_A* 1asv_A 1a5v_A* 1a5w_A* 1a5x_A* 1vsf_A* 1vse_A* 3o4n_A* 1vsm_A 3o4q_A* 1vsd_A* 1vsh_A* 1vsi_A* 1vsj_A* 1vsk_A 1vsl_A
Probab=39.74 E-value=1.1e+02 Score=28.99 Aligned_cols=71 Identities=11% Similarity=-0.018 Sum_probs=47.9
Q ss_pred CcEEEEeeeeeeccCCccccceeeeecCcceeEEEEEEecCCchhhHHHHHHHHHhhhCCCCCcEEecCCchHHHH
Q 002062 405 GDVVILDTTFRIEANNMIYAPFLGLNHHRQYVLFGGAFLLDDSKDSFIWLLRTFLDSMGRRQPSTIFTDGYQAMAD 480 (973)
Q Consensus 405 gDVV~~DtTy~tNky~~pL~~fvGvn~~gq~~~fg~ALl~dEt~esf~Wlf~~fl~~m~~~~P~tIITD~d~am~~ 480 (973)
.+++.+|.||..... +-.+.++.+|..-+.+ +|+.+- +.+.+...-+|+.+....+ .|.+|.||+......
T Consensus 11 ~~~~~~D~~~~~~~~-g~~yl~~~iD~~Sr~i-~~~~~~-~~~~~~v~~~l~~~~~~~g--~p~~i~sDnG~~f~s 81 (162)
T 1cxq_A 11 LQIWQTDFTLEPRMA-PRSWLAVTVDTASSAI-VVTQHG-RVTSVAAQHHWATAIAVLG--RPKAIKTDNGSCFTS 81 (162)
T ss_dssp CCEEEEEEEECGGGT-TSCEEEEEEETTTCCE-EEEEES-SCCHHHHHHHHHHHHHHHC--CCSEEECCSCHHHHS
T ss_pred CCEEEeeeeecccCC-CCEEEEEEEEcCCCeE-EEEECC-CccHHHHHHHHHHHHHHHC--CCeEEEeCCchhhhh
Confidence 468889999865433 3355667788776655 456554 6777766666666555554 488999999987754
No 7
>3l3u_A POL polyprotein; DNA integration, AIDS, integrase, endonuclease, polynucleotidyl transferase, DNA binding, viral protein; 1.40A {Human immunodeficiency virus 1} PDB: 3ao1_A 3l3v_A* 3ovn_A* 3ao2_A* 3ao3_A* 3ao4_A* 3ao5_A* 2itg_A 1biz_A 1biu_A 1b9d_A 4dmn_A* 2b4j_A 1itg_A 1b92_A 1bl3_A 1bi4_A 1bis_A 1b9f_A 1bi4_B ...
Probab=39.43 E-value=69 Score=30.20 Aligned_cols=64 Identities=13% Similarity=0.126 Sum_probs=44.7
Q ss_pred CcEEEEeeeeeeccCCccccceeeeecCcceeEEEEEEecCCchhhHHHHHHHHHhhhCCCCCcEEecCCchHH
Q 002062 405 GDVVILDTTFRIEANNMIYAPFLGLNHHRQYVLFGGAFLLDDSKDSFIWLLRTFLDSMGRRQPSTIFTDGYQAM 478 (973)
Q Consensus 405 gDVV~~DtTy~tNky~~pL~~fvGvn~~gq~~~fg~ALl~dEt~esf~Wlf~~fl~~m~~~~P~tIITD~d~am 478 (973)
.+++.+|.||..++ +.++.+|..-+.+ +++.+ .+++.+...-++..+...++ |++|.||+....
T Consensus 9 ~~~w~~D~t~~~g~-----y~~~~iD~~sr~~-~~~~~-~~~~~~~~~~~l~~~~~~~~---~~~i~sD~G~~f 72 (163)
T 3l3u_A 9 PGIWQLDCTHLEGK-----VILVAVHVASGYI-EAEVI-PAETGQETAYFLLKLAGRWP---VKTVHTDNGSNF 72 (163)
T ss_dssp TTEEEEEEEEETTE-----EEEEEEETTTCCE-EEEEE-SSCCHHHHHHHHHHHHHHSC---CCEEEECCCGGG
T ss_pred CCEEEEEecccCCc-----EEEEEEecCCCcE-EEEEe-CCCcHHHHHHHHHHHHHHcC---CcEEeecChHhh
Confidence 36788999998653 4667778877655 55554 56677777766666555554 589999997654
No 8
>1c0m_A Protein (integrase); HIV, X-RAY crystallography, protein structure, transferase; 2.53A {Rous sarcoma virus} SCOP: b.34.7.1 c.55.3.2 PDB: 1c1a_A
Probab=39.24 E-value=82 Score=32.18 Aligned_cols=71 Identities=11% Similarity=0.000 Sum_probs=49.8
Q ss_pred CcEEEEeeeeeeccCCccccceeeeecCcceeEEEEEEecCCchhhHHHHHHHHHhhhCCCCCcEEecCCchHHHH
Q 002062 405 GDVVILDTTFRIEANNMIYAPFLGLNHHRQYVLFGGAFLLDDSKDSFIWLLRTFLDSMGRRQPSTIFTDGYQAMAD 480 (973)
Q Consensus 405 gDVV~~DtTy~tNky~~pL~~fvGvn~~gq~~~fg~ALl~dEt~esf~Wlf~~fl~~m~~~~P~tIITD~d~am~~ 480 (973)
.+++.+|.||.....+ -.+.++.+|..-+.+ +|+.+- .++.+...-+|.......+ .|.+|.||+......
T Consensus 10 ~~~w~~D~~~~~~~~g-~~yl~~~iD~~Sr~i-~~~~~~-~~~~~~v~~~l~~~~~~~g--~p~~i~sDnG~~f~s 80 (238)
T 1c0m_A 10 LQIWQTDFTLEPRMAP-RSWLAVTVDTASSAI-VVTQHG-RVTSVAVQHHWATAIAVLG--RPKAIKTDNGSCFTS 80 (238)
T ss_dssp TSEEEEEEEECGGGCS-SCEEEEEEETTTCCE-EEEEES-SCCHHHHHHHHHHHHHHHC--CCSEEEECSCHHHHS
T ss_pred CCEEEEeeccccccCC-CEEEEEEEECCCCCE-EEEEcc-CCCHHHHHHHHHHHHHHhC--CCcEEEECCCCcccc
Confidence 4688999998654333 355667777766544 456654 7888877777776666655 488999999887754
No 9
>3hot_A Transposable element mariner, complete CDS; protein-DNA complex, synaptic complex, transposase, inverted DNA, DNA binding protein-DNA complex; HET: 5IU; 3.25A {Drosophila mauritiana} PDB: 3hos_A*
Probab=29.04 E-value=2.3e+02 Score=30.26 Aligned_cols=56 Identities=5% Similarity=-0.053 Sum_probs=35.5
Q ss_pred cCCccccceeeeecCcceeEEEEEEec---CCchhhHHHHHHHHHhhh----CC----CCCcEEecCCch
Q 002062 418 ANNMIYAPFLGLNHHRQYVLFGGAFLL---DDSKDSFIWLLRTFLDSM----GR----RQPSTIFTDGYQ 476 (973)
Q Consensus 418 ky~~pL~~fvGvn~~gq~~~fg~ALl~---dEt~esf~Wlf~~fl~~m----~~----~~P~tIITD~d~ 476 (973)
.+..-+..+.+++..| ++++.++. .-+.+.|.-+|+.++..+ +. ..+.+|+.|...
T Consensus 186 ~~~~~~~v~~~~~~~g---~~~~~~~~~~~~~~~~~y~~~L~~~~~~~~~~~p~~~~~~~~~~~~~Dna~ 252 (345)
T 3hot_A 186 RFGKKTMLCVWWDQSG---VIYYELLKPGETVNAARYQQQLINLNRALQRKRPEYQKRQHRVIFLHDNAP 252 (345)
T ss_dssp TTCCEEEEEEEEESSS---EEEEEEECSSCCCCHHHHHHHHHHHHHHHHHHSTTCC---CCCEEECCCCT
T ss_pred CcCCcEEEEEEEcccC---ceeeEecCCCCcccHHHHHHHHHHHHHHHHHhchhhhcCCCceEEEECCCC
Confidence 3444555556666666 56666765 457788888887776554 21 235688999865
No 10
>2x78_A Integrase; viral protein, DNA-directed DNA polyme nucleotidyltransferase, DNA integration, aspartyl protease, recombination, transferase; 2.00A {Human spumaretrovirus} PDB: 2x6n_A 2x6s_A 2x74_A 3dlr_A
Probab=27.05 E-value=1.6e+02 Score=28.69 Aligned_cols=70 Identities=11% Similarity=0.010 Sum_probs=44.5
Q ss_pred CcEEEEee-eeeeccCCccccceeeeecCcceeEEEEEEecCCchhhHHHHHHHHHhhhCCCCCcEEecCCchHHHH
Q 002062 405 GDVVILDT-TFRIEANNMIYAPFLGLNHHRQYVLFGGAFLLDDSKDSFIWLLRTFLDSMGRRQPSTIFTDGYQAMAD 480 (973)
Q Consensus 405 gDVV~~Dt-Ty~tNky~~pL~~fvGvn~~gq~~~fg~ALl~dEt~esf~Wlf~~fl~~m~~~~P~tIITD~d~am~~ 480 (973)
.+++.+|. ++.... ++..+.++.+|..-+.+ +++.+ .+.+.+...-+|+.+ +.-..|++|.||+......
T Consensus 13 ~~~~~~D~~~~~~~~-~g~~y~~~~iD~~Sr~~-~~~~~-~~~~~~~~~~~l~~~---~~~g~p~~i~sDnG~~f~s 83 (200)
T 2x78_A 13 FDKFFIDYIGPLPPS-QGYLYVLVVVDGMTGFT-WLYPT-KAPSTSATVKSLNVL---TSIAIPRVIHSDQGAAFTS 83 (200)
T ss_dssp TSEEEEEEECCCSCB-TTBCEEEEEEETTTCCE-EEEEE-SSSCHHHHHHHHHHH---TTTCCCSEEEECSCHHHHS
T ss_pred ccEEEEEEeCCCccC-CCCeEEEEEEeCCCCcE-EEEEC-CCCCHHHHHHHHHHH---HHhCCCcEEEecCCcceeh
Confidence 46788887 454433 34566777788776655 45555 666666554444433 3335789999999887643
No 11
>3av9_A Integrase, IN; protein-protein interactions, HIV, recombination-inhibitor C; 1.70A {Human immunodeficiency virus type 1} PDB: 3ava_A 3avb_A 3avc_A 3avg_A 3avh_A 3avi_A 3avj_A 3avk_A 3avl_A 3avm_A 3avn_A 3nf6_A* 3nf7_A* 3nf8_A* 3nf9_A* 3nfa_A* 3avf_A
Probab=26.90 E-value=1.4e+02 Score=28.94 Aligned_cols=66 Identities=12% Similarity=0.132 Sum_probs=40.3
Q ss_pred CcEEEEeeeeeeccCCccccceeeeecCcceeEEEEEEecCCchhhHHHHHHHHHhhhCCCCCcEEecCCchHHHH
Q 002062 405 GDVVILDTTFRIEANNMIYAPFLGLNHHRQYVLFGGAFLLDDSKDSFIWLLRTFLDSMGRRQPSTIFTDGYQAMAD 480 (973)
Q Consensus 405 gDVV~~DtTy~tNky~~pL~~fvGvn~~gq~~~fg~ALl~dEt~esf~Wlf~~fl~~m~~~~P~tIITD~d~am~~ 480 (973)
++++.+|.|+..++| .++.||..-+.+ +|+. +.+.+.....-++..+.... .+++|.+|+......
T Consensus 29 ~~~w~~D~~~~~g~~-----~l~~vD~~Sr~~-~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~i~sDnG~ef~s 94 (183)
T 3av9_A 29 PGIWQLDCTHLEGKV-----ILVAVHVASGYI-EAEV-IPAETGQETAYFLLKLAGRW---PVKTVHTDNGSNFTS 94 (183)
T ss_dssp TTEEEEEEEEETTEE-----EEEEEETTTTEE-EEEE-ESSCCHHHHHHHHHHHHHHS---CCCEEECSSHHHHHC
T ss_pred CCEEEEeccccCCcE-----EEEEEECCCCCE-EEEE-eCCccchHHHHHHHHHHHHc---CCcEEEecCchhcch
Confidence 467888888873332 345557666655 5554 45556555554444444333 349999999887643
No 12
>1bco_A MUA domain II, bacteriophage MU transposase; polynucleotidyl transferase, DNA binding, endonuclease, integrase; 2.40A {Enterobacteria phage MU} SCOP: b.48.1.1 c.55.3.3 PDB: 1bcm_A
Probab=26.88 E-value=1.3e+02 Score=32.45 Aligned_cols=72 Identities=13% Similarity=0.047 Sum_probs=49.6
Q ss_pred cCcEEEEeeeeeecc----CCc--cccceeeeecCcceeEEEEEEecCCchhhHHHHHHHHHhhhCCCCCc--EEecCCc
Q 002062 404 FGDVVILDTTFRIEA----NNM--IYAPFLGLNHHRQYVLFGGAFLLDDSKDSFIWLLRTFLDSMGRRQPS--TIFTDGY 475 (973)
Q Consensus 404 FgDVV~~DtTy~tNk----y~~--pL~~fvGvn~~gq~~~fg~ALl~dEt~esf~Wlf~~fl~~m~~~~P~--tIITD~d 475 (973)
-++++.+|.|+..-. -+. ...+.+.+|..-. .++|+.+...++.++..-+|.......| .|. +|.+|+-
T Consensus 15 p~~~w~~D~t~~d~~~~~~~g~~~r~~l~~~iD~~SR-~ivg~~~~~~~~~~~v~~aL~~a~~~~G--~P~~~~i~sDnG 91 (327)
T 1bco_A 15 AMQWINGDGYLHNVFVRWFNGDVIRPKTWFWQDVKTR-KILGWRCDVSENIDSIRLSFMDVVTRYG--IPEDFHITIDNT 91 (327)
T ss_dssp TTTEEEEEEEECSBCEECTTSCEECCEEEEEEETTTC-CEEEEEEESSCCHHHHHHHHHHHHHHHC--EESSCEEECCCT
T ss_pred CCcEEEecCCEEEEEEECCCCccceeEEEEEEECCCC-cEEEEEEECCCCHHHHHHHHHHHHHhcC--CCCCcEEEeeCc
Confidence 468899999875432 121 2445566776655 4578998889998888877776666554 577 9999986
Q ss_pred hHH
Q 002062 476 QAM 478 (973)
Q Consensus 476 ~am 478 (973)
...
T Consensus 92 ~~f 94 (327)
T 1bco_A 92 RGA 94 (327)
T ss_dssp TST
T ss_pred hhh
Confidence 544
No 13
>1c6v_A Protein (SIV integrase); DNA integration, DNA binding protein; 3.00A {Simian immunodeficiency virus} SCOP: c.55.3.2
Probab=20.75 E-value=2.4e+02 Score=25.88 Aligned_cols=63 Identities=8% Similarity=0.038 Sum_probs=37.7
Q ss_pred CcEEEEeeeeeeccCCccccceeeeecCcceeEEEEEEecCCchhhHHHHHHHHHhhhCCCCCcEEecCCchH
Q 002062 405 GDVVILDTTFRIEANNMIYAPFLGLNHHRQYVLFGGAFLLDDSKDSFIWLLRTFLDSMGRRQPSTIFTDGYQA 477 (973)
Q Consensus 405 gDVV~~DtTy~tNky~~pL~~fvGvn~~gq~~~fg~ALl~dEt~esf~Wlf~~fl~~m~~~~P~tIITD~d~a 477 (973)
.+++.+|.|+..++ +.++.+|..-+.+ +++. +.+.+.+.+.-++..+.... .|++|.+|+...
T Consensus 9 ~~~w~~D~~~~~g~-----~~l~~iD~~Sr~~-~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~i~sDnG~~ 71 (164)
T 1c6v_A 9 LGTWQMDCTHLEGK-----IVIVAVHVASGFI-EAEV-IPQETGRQTALFLLKLAGRW---PITHLHTDNGAN 71 (164)
T ss_dssp TTEEEEEEEEETTE-----EEEEEECTTSCCE-EEEE-CSSCSHHHHHHHHHHHHTTS---CCCEEECCCCSS
T ss_pred CCEEEEeecccCCE-----EEEEEEEccCCEE-EEEE-cCCCchHHHHHHHHHHHHhc---CCCEEEeCCchh
Confidence 35778898888222 3444477766644 4554 45566665554444433333 489999998544
Done!