Query 002063
Match_columns 973
No_of_seqs 900 out of 6171
Neff 9.5
Searched_HMMs 46136
Date Thu Mar 28 15:40:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002063.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002063hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 2E-112 4E-117 1080.2 66.7 895 29-957 27-955 (968)
2 PLN00113 leucine-rich repeat r 100.0 3.7E-57 7.9E-62 574.5 30.5 489 97-588 69-585 (968)
3 KOG1187 Serine/threonine prote 100.0 2.2E-46 4.8E-51 411.5 25.2 287 662-956 62-355 (361)
4 KOG0581 Mitogen-activated prot 100.0 3.2E-46 6.9E-51 383.4 19.5 256 675-952 78-338 (364)
5 KOG0615 Serine/threonine prote 100.0 3.5E-45 7.6E-50 377.1 15.3 255 674-951 170-439 (475)
6 KOG0192 Tyrosine kinase specif 100.0 6.2E-44 1.3E-48 388.5 22.2 254 677-955 42-305 (362)
7 KOG0595 Serine/threonine-prote 100.0 9.8E-44 2.1E-48 367.6 21.0 201 673-884 7-217 (429)
8 KOG0591 NIMA (never in mitosis 100.0 5E-45 1.1E-49 357.0 8.6 262 672-951 15-283 (375)
9 KOG0575 Polo-like serine/threo 100.0 2.9E-43 6.2E-48 382.3 22.2 248 676-950 18-270 (592)
10 KOG0197 Tyrosine kinases [Sign 100.0 1.9E-43 4.2E-48 380.7 16.8 256 678-957 208-465 (468)
11 KOG0598 Ribosomal protein S6 k 100.0 8.1E-43 1.7E-47 358.4 18.3 243 673-941 22-269 (357)
12 KOG0593 Predicted protein kina 100.0 4E-43 8.6E-48 347.3 14.3 262 676-949 2-284 (396)
13 KOG0472 Leucine-rich repeat pr 100.0 1.6E-46 3.5E-51 383.9 -12.4 475 75-570 47-544 (565)
14 KOG1026 Nerve growth factor re 100.0 1.2E-41 2.5E-46 384.4 17.6 265 676-959 486-768 (774)
15 KOG0661 MAPK related serine/th 100.0 3.4E-42 7.3E-47 361.2 12.1 265 674-951 8-293 (538)
16 KOG0592 3-phosphoinositide-dep 100.0 1.4E-41 3E-46 362.2 16.8 253 673-950 70-339 (604)
17 KOG0472 Leucine-rich repeat pr 100.0 9.1E-45 2E-49 371.1 -11.5 457 74-547 69-545 (565)
18 KOG0582 Ste20-like serine/thre 100.0 4.8E-40 1E-44 342.4 23.2 262 675-949 25-293 (516)
19 KOG3653 Transforming growth fa 100.0 4.5E-40 9.8E-45 345.0 22.9 276 676-965 210-516 (534)
20 KOG0659 Cdk activating kinase 100.0 7.9E-41 1.7E-45 325.9 14.8 263 676-949 2-281 (318)
21 KOG0600 Cdc2-related protein k 100.0 1.2E-40 2.6E-45 352.2 16.2 265 672-949 113-400 (560)
22 KOG0597 Serine-threonine prote 100.0 1.4E-40 3.1E-45 353.7 14.7 248 676-951 2-253 (808)
23 KOG4194 Membrane glycoprotein 100.0 1.4E-41 3.1E-46 362.4 6.9 399 124-572 55-459 (873)
24 KOG0616 cAMP-dependent protein 100.0 4.2E-40 9.1E-45 325.6 16.3 238 673-940 41-283 (355)
25 KOG0193 Serine/threonine prote 100.0 2.5E-40 5.3E-45 356.9 16.0 260 674-956 390-656 (678)
26 KOG0196 Tyrosine kinase, EPH ( 100.0 8.1E-41 1.8E-45 368.3 12.0 257 677-957 630-895 (996)
27 KOG0198 MEKK and related serin 100.0 3.5E-40 7.5E-45 347.2 16.3 260 676-956 17-283 (313)
28 KOG0583 Serine/threonine prote 100.0 3.7E-39 8.1E-44 355.0 24.2 251 673-949 14-275 (370)
29 KOG0585 Ca2+/calmodulin-depend 100.0 1.1E-39 2.3E-44 341.7 17.0 262 671-955 92-378 (576)
30 KOG4194 Membrane glycoprotein 100.0 3E-41 6.5E-46 359.9 5.4 385 100-511 55-445 (873)
31 KOG0605 NDR and related serine 100.0 7.7E-39 1.7E-43 342.1 23.1 252 674-949 139-445 (550)
32 KOG0658 Glycogen synthase kina 100.0 8.2E-40 1.8E-44 335.3 12.4 263 676-949 24-306 (364)
33 KOG0578 p21-activated serine/t 100.0 1.6E-39 3.5E-44 350.3 15.0 249 676-950 273-524 (550)
34 KOG0580 Serine/threonine prote 100.0 1.6E-39 3.4E-44 312.4 12.3 252 674-952 20-276 (281)
35 cd05102 PTKc_VEGFR3 Catalytic 100.0 9.7E-39 2.1E-43 356.8 19.9 262 675-954 6-335 (338)
36 KOG2345 Serine/threonine prote 100.0 2.3E-39 5.1E-44 312.5 12.1 265 675-954 20-301 (302)
37 KOG1095 Protein tyrosine kinas 100.0 7E-39 1.5E-43 375.4 16.8 261 676-955 692-963 (1025)
38 KOG0663 Protein kinase PITSLRE 100.0 1.9E-38 4.2E-43 318.4 17.0 267 673-950 73-362 (419)
39 KOG0201 Serine/threonine prote 100.0 2E-39 4.3E-44 338.1 9.8 247 677-949 14-263 (467)
40 KOG4721 Serine/threonine prote 100.0 3.5E-39 7.7E-44 342.5 11.7 244 679-955 127-370 (904)
41 KOG0588 Serine/threonine prote 100.0 1.9E-38 4.1E-43 345.0 17.6 253 674-954 10-268 (786)
42 KOG0694 Serine/threonine prote 100.0 3.3E-38 7.2E-43 346.6 18.1 243 673-943 365-613 (694)
43 KOG1094 Discoidin domain recep 100.0 6E-38 1.3E-42 334.9 18.9 261 677-953 539-804 (807)
44 KOG0610 Putative serine/threon 100.0 6.7E-38 1.5E-42 324.1 18.7 254 675-949 76-392 (459)
45 cd05096 PTKc_DDR1 Catalytic do 100.0 1.8E-37 3.8E-42 341.2 23.3 265 676-952 5-304 (304)
46 KOG0660 Mitogen-activated prot 100.0 7.1E-38 1.5E-42 320.5 18.2 262 676-950 22-311 (359)
47 cd05104 PTKc_Kit Catalytic dom 100.0 1E-37 2.3E-42 352.0 20.8 261 675-953 34-374 (375)
48 cd05631 STKc_GRK4 Catalytic do 100.0 2.2E-37 4.8E-42 336.9 22.7 251 677-949 1-261 (285)
49 KOG0611 Predicted serine/threo 100.0 2E-38 4.4E-43 324.1 13.1 249 674-951 51-305 (668)
50 cd05106 PTKc_CSF-1R Catalytic 100.0 1.5E-37 3.2E-42 350.3 19.8 261 675-953 37-372 (374)
51 KOG1989 ARK protein kinase fam 100.0 1.9E-37 4.1E-42 352.5 20.5 257 676-955 37-313 (738)
52 KOG0194 Protein tyrosine kinas 100.0 4.7E-38 1E-42 345.4 14.7 258 677-958 158-425 (474)
53 KOG0589 Serine/threonine prote 100.0 6E-38 1.3E-42 337.7 13.7 251 675-949 3-258 (426)
54 cd06649 PKc_MEK2 Catalytic dom 100.0 1E-36 2.3E-41 338.8 24.2 263 676-951 5-303 (331)
55 cd05048 PTKc_Ror Catalytic Dom 100.0 6E-37 1.3E-41 333.6 21.7 260 675-953 4-283 (283)
56 PTZ00263 protein kinase A cata 100.0 5.4E-37 1.2E-41 340.5 21.4 247 674-950 16-272 (329)
57 cd05612 STKc_PRKX_like Catalyt 100.0 3.3E-37 7.2E-42 336.4 19.3 246 676-951 1-256 (291)
58 cd07871 STKc_PCTAIRE3 Catalyti 100.0 5.9E-37 1.3E-41 334.0 21.0 263 675-949 4-285 (288)
59 cd05571 STKc_PKB Catalytic dom 100.0 5.6E-37 1.2E-41 339.7 20.4 241 682-949 1-251 (323)
60 PHA02988 hypothetical protein; 100.0 8.8E-37 1.9E-41 331.2 21.2 244 682-954 26-280 (283)
61 KOG0033 Ca2+/calmodulin-depend 100.0 9.3E-39 2E-43 306.6 4.9 255 675-953 10-271 (355)
62 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 7.6E-37 1.7E-41 340.5 21.1 253 676-950 1-258 (333)
63 cd05064 PTKc_EphR_A10 Catalyti 100.0 9.9E-37 2.1E-41 328.4 20.8 254 676-953 5-265 (266)
64 cd07848 STKc_CDKL5 Catalytic d 100.0 1.4E-36 3E-41 331.4 21.7 263 676-949 1-284 (287)
65 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.3E-36 2.9E-41 343.5 22.0 263 675-955 36-399 (400)
66 KOG0594 Protein kinase PCTAIRE 100.0 8.6E-37 1.9E-41 314.5 18.6 272 675-954 10-309 (323)
67 PTZ00267 NIMA-related protein 100.0 1.5E-36 3.2E-41 352.9 22.2 253 677-949 68-323 (478)
68 KOG4717 Serine/threonine prote 100.0 7.2E-37 1.6E-41 321.3 17.0 249 674-949 16-270 (864)
69 cd05052 PTKc_Abl Catalytic dom 100.0 2.3E-36 4.9E-41 325.1 21.3 255 676-953 6-262 (263)
70 cd08228 STKc_Nek6 Catalytic do 100.0 4.9E-36 1.1E-40 323.4 23.9 260 676-954 2-266 (267)
71 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2.9E-36 6.2E-41 331.4 22.3 264 676-949 5-288 (303)
72 PF07714 Pkinase_Tyr: Protein 100.0 7.8E-37 1.7E-41 327.4 17.3 249 680-950 3-259 (259)
73 cd05108 PTKc_EGFR Catalytic do 100.0 1.8E-36 3.8E-41 335.1 20.4 257 675-955 6-270 (316)
74 PHA03212 serine/threonine kina 100.0 4.9E-36 1.1E-40 338.8 24.1 263 675-951 91-378 (391)
75 cd05595 STKc_PKB_beta Catalyti 100.0 2.6E-36 5.7E-41 334.1 21.3 241 682-949 1-251 (323)
76 cd05593 STKc_PKB_gamma Catalyt 100.0 2.7E-36 5.8E-41 334.6 21.3 242 682-950 1-252 (328)
77 PTZ00283 serine/threonine prot 100.0 3.5E-36 7.6E-41 349.5 23.1 256 674-949 30-297 (496)
78 cd06650 PKc_MEK1 Catalytic dom 100.0 8.6E-36 1.9E-40 331.3 25.2 263 676-951 5-301 (333)
79 PTZ00426 cAMP-dependent protei 100.0 2.2E-36 4.7E-41 336.2 20.2 246 674-949 28-284 (340)
80 cd05084 PTKc_Fes Catalytic dom 100.0 4E-36 8.6E-41 321.1 21.4 248 682-952 1-252 (252)
81 PLN00034 mitogen-activated pro 100.0 2.3E-36 5E-41 339.2 20.6 250 675-951 73-330 (353)
82 cd05585 STKc_YPK1_like Catalyt 100.0 2.8E-36 6E-41 332.6 20.8 239 684-949 1-247 (312)
83 cd05049 PTKc_Trk Catalytic dom 100.0 3.3E-36 7.3E-41 327.2 21.0 259 675-952 4-280 (280)
84 cd05033 PTKc_EphR Catalytic do 100.0 4.8E-36 1E-40 323.3 21.8 255 676-953 4-265 (266)
85 KOG4278 Protein tyrosine kinas 100.0 3.7E-37 7.9E-42 329.5 12.6 254 677-953 268-523 (1157)
86 cd05054 PTKc_VEGFR Catalytic d 100.0 2.5E-36 5.4E-41 335.8 19.7 262 676-955 7-335 (337)
87 cd05608 STKc_GRK1 Catalytic do 100.0 6.4E-36 1.4E-40 324.5 22.3 247 684-949 1-257 (280)
88 KOG2052 Activin A type IB rece 100.0 1.1E-35 2.5E-40 309.6 22.9 267 676-957 211-507 (513)
89 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3E-36 6.4E-41 337.1 20.1 263 677-950 1-291 (338)
90 cd05605 STKc_GRK4_like Catalyt 100.0 6E-36 1.3E-40 325.6 21.9 251 677-949 1-261 (285)
91 cd05062 PTKc_IGF-1R Catalytic 100.0 4E-36 8.7E-41 325.9 20.4 260 674-952 4-277 (277)
92 cd05072 PTKc_Lyn Catalytic dom 100.0 5.7E-36 1.2E-40 321.7 21.3 255 675-953 5-261 (261)
93 cd05036 PTKc_ALK_LTK Catalytic 100.0 5.3E-36 1.2E-40 324.8 21.0 260 674-952 4-277 (277)
94 cd05114 PTKc_Tec_Rlk Catalytic 100.0 6.7E-36 1.4E-40 320.1 21.5 251 676-951 4-256 (256)
95 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.2E-36 2.5E-41 342.0 16.3 253 676-950 1-286 (350)
96 KOG0574 STE20-like serine/thre 100.0 4.8E-38 1E-42 309.7 4.2 251 677-950 34-284 (502)
97 cd05093 PTKc_TrkB Catalytic do 100.0 5.9E-36 1.3E-40 326.4 21.1 261 676-955 5-281 (288)
98 cd05090 PTKc_Ror1 Catalytic do 100.0 6.5E-36 1.4E-40 325.4 21.3 259 675-952 4-282 (283)
99 cd05626 STKc_LATS2 Catalytic d 100.0 3.7E-36 8.1E-41 340.8 20.1 253 677-950 2-306 (381)
100 cd07862 STKc_CDK6 Catalytic do 100.0 9.5E-36 2.1E-40 325.4 22.3 261 677-949 2-287 (290)
101 KOG0032 Ca2+/calmodulin-depend 100.0 1E-35 2.2E-40 327.0 22.5 254 673-951 32-295 (382)
102 KOG0577 Serine/threonine prote 100.0 2.6E-37 5.7E-42 329.6 9.5 246 677-951 27-280 (948)
103 cd05107 PTKc_PDGFR_beta Cataly 100.0 6.7E-36 1.4E-40 337.5 21.2 261 675-953 36-399 (401)
104 cd05596 STKc_ROCK Catalytic do 100.0 3.2E-36 6.9E-41 339.3 18.5 254 674-950 41-305 (370)
105 cd05111 PTK_HER3 Pseudokinase 100.0 8.9E-36 1.9E-40 323.3 21.3 258 676-957 7-272 (279)
106 cd05628 STKc_NDR1 Catalytic do 100.0 6.4E-36 1.4E-40 336.8 20.7 201 676-884 1-239 (363)
107 cd05094 PTKc_TrkC Catalytic do 100.0 7.9E-36 1.7E-40 325.9 20.6 262 676-956 5-285 (291)
108 cd05053 PTKc_FGFR Catalytic do 100.0 5.8E-36 1.3E-40 327.6 19.3 261 675-954 11-292 (293)
109 cd05045 PTKc_RET Catalytic dom 100.0 9.1E-36 2E-40 325.4 20.8 259 677-954 1-287 (290)
110 cd05589 STKc_PKN Catalytic dom 100.0 9.4E-36 2E-40 330.2 21.2 245 678-950 1-258 (324)
111 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.9E-35 6.3E-40 317.4 24.3 260 676-954 2-266 (267)
112 cd05607 STKc_GRK7 Catalytic do 100.0 1.7E-35 3.7E-40 320.6 22.5 246 684-950 1-251 (277)
113 cd05621 STKc_ROCK2 Catalytic d 100.0 6.4E-36 1.4E-40 336.2 19.8 254 674-950 41-305 (370)
114 PRK13184 pknD serine/threonine 100.0 1.2E-35 2.5E-40 351.9 22.9 261 676-953 2-290 (932)
115 cd05592 STKc_nPKC_theta_delta 100.0 1.3E-35 2.8E-40 327.5 21.9 240 682-948 1-247 (316)
116 cd05051 PTKc_DDR Catalytic dom 100.0 1.8E-35 4E-40 324.2 22.9 266 675-952 4-296 (296)
117 cd08229 STKc_Nek7 Catalytic do 100.0 1.4E-35 3E-40 320.0 21.5 260 676-954 2-266 (267)
118 cd05068 PTKc_Frk_like Catalyti 100.0 1.7E-35 3.7E-40 318.0 22.1 255 675-953 5-261 (261)
119 cd05148 PTKc_Srm_Brk Catalytic 100.0 6.7E-36 1.4E-40 321.2 18.9 255 674-953 4-261 (261)
120 cd05035 PTKc_Axl_like Catalyti 100.0 1.9E-35 4.1E-40 320.0 22.4 257 678-953 1-272 (273)
121 cd05594 STKc_PKB_alpha Catalyt 100.0 5.3E-36 1.2E-40 332.3 18.4 242 682-949 1-252 (325)
122 cd05599 STKc_NDR_like Catalyti 100.0 8.5E-36 1.8E-40 336.6 20.3 253 676-950 1-297 (364)
123 KOG0667 Dual-specificity tyros 100.0 5.4E-36 1.2E-40 329.9 18.1 265 675-952 185-505 (586)
124 cd05590 STKc_nPKC_eta Catalyti 100.0 1.2E-35 2.7E-40 328.3 21.1 241 682-949 1-253 (320)
125 cd05109 PTKc_HER2 Catalytic do 100.0 1.5E-35 3.2E-40 321.8 21.4 259 675-957 6-272 (279)
126 cd05614 STKc_MSK2_N N-terminal 100.0 9.7E-36 2.1E-40 331.6 20.4 252 677-950 1-268 (332)
127 cd05055 PTKc_PDGFR Catalytic d 100.0 1.7E-35 3.6E-40 324.7 21.6 258 675-953 34-301 (302)
128 cd05587 STKc_cPKC Catalytic do 100.0 1.8E-35 4E-40 327.9 22.1 246 677-949 1-257 (324)
129 cd05032 PTKc_InsR_like Catalyt 100.0 1.2E-35 2.6E-40 322.3 20.2 259 675-952 5-277 (277)
130 PTZ00036 glycogen synthase kin 100.0 1.2E-35 2.6E-40 341.2 21.2 266 675-951 65-353 (440)
131 cd05601 STKc_CRIK Catalytic do 100.0 5.1E-36 1.1E-40 333.6 17.5 252 676-949 1-263 (330)
132 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.8E-35 3.9E-40 316.6 20.9 251 676-951 4-256 (256)
133 cd05618 STKc_aPKC_iota Catalyt 100.0 1.4E-35 3.1E-40 328.9 20.8 247 682-949 1-262 (329)
134 cd05629 STKc_NDR_like_fungal C 100.0 5.6E-36 1.2E-40 339.3 17.8 253 676-950 1-306 (377)
135 cd05075 PTKc_Axl Catalytic dom 100.0 2.3E-35 5E-40 319.1 21.8 257 678-953 1-271 (272)
136 cd06625 STKc_MEKK3_like Cataly 100.0 3.4E-35 7.4E-40 316.1 22.9 252 676-950 2-261 (263)
137 cd05588 STKc_aPKC Catalytic do 100.0 1.5E-35 3.4E-40 328.9 20.8 247 682-949 1-262 (329)
138 cd05061 PTKc_InsR Catalytic do 100.0 3E-35 6.5E-40 320.8 22.2 264 674-956 4-281 (288)
139 cd05584 STKc_p70S6K Catalytic 100.0 2.1E-35 4.5E-40 327.1 21.2 242 682-950 2-257 (323)
140 cd08529 STKc_FA2-like Catalyti 100.0 3.5E-35 7.7E-40 314.6 22.4 249 677-949 1-253 (256)
141 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.9E-35 4.2E-40 325.1 20.8 263 675-956 14-299 (304)
142 cd05619 STKc_nPKC_theta Cataly 100.0 4.9E-35 1.1E-39 322.7 24.0 240 682-948 1-247 (316)
143 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.1E-35 4.5E-40 321.3 20.7 266 679-954 7-282 (283)
144 cd05097 PTKc_DDR_like Catalyti 100.0 3E-35 6.5E-40 322.0 21.9 265 676-952 5-295 (295)
145 cd07876 STKc_JNK2 Catalytic do 100.0 4.2E-35 9.1E-40 330.0 23.6 264 673-951 18-317 (359)
146 cd05591 STKc_nPKC_epsilon Cata 100.0 3.2E-35 6.9E-40 325.5 22.2 242 682-950 1-255 (321)
147 cd06646 STKc_MAP4K5 Catalytic 100.0 3.6E-35 7.9E-40 316.6 22.1 254 675-950 8-266 (267)
148 cd05620 STKc_nPKC_delta Cataly 100.0 3.7E-35 7.9E-40 323.9 22.4 240 682-948 1-247 (316)
149 cd05598 STKc_LATS Catalytic do 100.0 5.6E-36 1.2E-40 339.4 16.3 251 677-949 2-301 (376)
150 cd05091 PTKc_Ror2 Catalytic do 100.0 1.5E-35 3.2E-40 322.6 18.9 258 676-952 5-282 (283)
151 cd05095 PTKc_DDR2 Catalytic do 100.0 4E-35 8.7E-40 321.2 22.5 265 676-952 5-296 (296)
152 cd05088 PTKc_Tie2 Catalytic do 100.0 1.6E-35 3.4E-40 325.3 19.2 261 673-955 4-282 (303)
153 cd05616 STKc_cPKC_beta Catalyt 100.0 3E-35 6.5E-40 326.0 21.7 246 677-949 1-257 (323)
154 cd05570 STKc_PKC Catalytic dom 100.0 3.3E-35 7.2E-40 324.7 21.7 241 682-949 1-252 (318)
155 cd05625 STKc_LATS1 Catalytic d 100.0 1.2E-35 2.5E-40 337.4 18.3 251 677-949 2-305 (382)
156 PHA03211 serine/threonine kina 100.0 4.2E-35 9E-40 334.6 22.9 262 676-949 169-455 (461)
157 cd05082 PTKc_Csk Catalytic dom 100.0 4.7E-35 1E-39 313.6 22.0 250 675-953 5-256 (256)
158 PF00069 Pkinase: Protein kina 100.0 3.9E-35 8.4E-40 315.0 21.3 252 678-949 1-257 (260)
159 cd05059 PTKc_Tec_like Catalyti 100.0 3.5E-35 7.7E-40 314.5 20.9 251 676-951 4-256 (256)
160 cd07872 STKc_PCTAIRE2 Catalyti 100.0 4.5E-35 9.8E-40 322.8 22.3 265 675-951 5-288 (309)
161 KOG0599 Phosphorylase kinase g 100.0 4.1E-36 8.9E-41 292.7 12.2 254 674-951 15-285 (411)
162 cd06654 STKc_PAK1 Catalytic do 100.0 5.2E-35 1.1E-39 320.0 22.5 249 676-949 20-270 (296)
163 cd05050 PTKc_Musk Catalytic do 100.0 3.1E-35 6.7E-40 320.9 20.7 259 675-952 4-288 (288)
164 cd05071 PTKc_Src Catalytic dom 100.0 5.4E-35 1.2E-39 314.1 21.8 253 676-953 6-260 (262)
165 cd05098 PTKc_FGFR1 Catalytic d 100.0 3E-35 6.6E-40 323.9 20.3 262 675-955 17-301 (307)
166 cd06619 PKc_MKK5 Catalytic dom 100.0 5.2E-35 1.1E-39 317.4 21.7 249 677-951 2-255 (279)
167 KOG0618 Serine/threonine phosp 100.0 7.4E-38 1.6E-42 352.1 -0.9 463 75-564 23-488 (1081)
168 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 4E-35 8.7E-40 319.4 20.4 267 677-953 5-283 (284)
169 KOG0199 ACK and related non-re 100.0 6.3E-36 1.4E-40 325.1 13.9 249 679-950 113-369 (1039)
170 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 7.2E-35 1.6E-39 312.9 22.1 253 676-953 6-260 (260)
171 cd05100 PTKc_FGFR3 Catalytic d 100.0 6.1E-35 1.3E-39 325.3 22.3 260 676-954 12-294 (334)
172 cd05089 PTKc_Tie1 Catalytic do 100.0 4.1E-35 8.8E-40 321.2 20.2 260 676-957 2-279 (297)
173 KOG4257 Focal adhesion tyrosin 100.0 2E-35 4.2E-40 317.3 17.0 252 678-954 391-650 (974)
174 cd05575 STKc_SGK Catalytic dom 100.0 3.7E-35 8E-40 325.3 19.9 241 682-949 1-251 (323)
175 cd05063 PTKc_EphR_A2 Catalytic 100.0 7.1E-35 1.5E-39 314.5 21.6 255 676-953 5-267 (268)
176 cd05103 PTKc_VEGFR2 Catalytic 100.0 3.7E-35 7.9E-40 327.9 19.9 262 676-955 7-341 (343)
177 cd05622 STKc_ROCK1 Catalytic d 100.0 2.9E-35 6.3E-40 331.3 19.1 254 674-950 41-305 (371)
178 cd08219 STKc_Nek3 Catalytic do 100.0 6.9E-35 1.5E-39 312.1 21.1 249 677-949 1-252 (255)
179 cd05630 STKc_GRK6 Catalytic do 100.0 8.7E-35 1.9E-39 316.3 22.2 251 677-949 1-261 (285)
180 cd05617 STKc_aPKC_zeta Catalyt 100.0 6.5E-35 1.4E-39 323.6 21.5 247 682-949 1-260 (327)
181 cd05092 PTKc_TrkA Catalytic do 100.0 5.5E-35 1.2E-39 317.4 20.5 258 676-952 5-280 (280)
182 cd05067 PTKc_Lck_Blk Catalytic 100.0 9.5E-35 2.1E-39 312.0 22.0 253 675-952 5-259 (260)
183 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 7.6E-35 1.7E-39 314.4 21.3 255 682-951 1-268 (269)
184 cd07863 STKc_CDK4 Catalytic do 100.0 1E-34 2.3E-39 316.8 22.5 262 677-949 1-285 (288)
185 cd05099 PTKc_FGFR4 Catalytic d 100.0 4.4E-35 9.6E-40 323.6 19.8 262 676-956 12-296 (314)
186 cd07868 STKc_CDK8 Catalytic do 100.0 1.2E-34 2.7E-39 320.7 23.4 200 681-884 6-219 (317)
187 cd06637 STKc_TNIK Catalytic do 100.0 6.8E-35 1.5E-39 315.4 20.7 252 675-949 5-269 (272)
188 cd05065 PTKc_EphR_B Catalytic 100.0 5.6E-35 1.2E-39 315.5 20.0 255 676-953 4-268 (269)
189 KOG0444 Cytoskeletal regulator 100.0 1.2E-37 2.7E-42 333.6 -0.7 363 143-539 6-372 (1255)
190 cd06612 STKc_MST1_2 Catalytic 100.0 1.1E-34 2.4E-39 310.8 22.0 251 676-949 3-253 (256)
191 cd07874 STKc_JNK3 Catalytic do 100.0 4.3E-35 9.4E-40 329.5 19.8 263 673-950 14-312 (355)
192 cd05632 STKc_GRK5 Catalytic do 100.0 1.2E-34 2.7E-39 315.3 22.7 250 678-949 2-261 (285)
193 cd05615 STKc_cPKC_alpha Cataly 100.0 8.7E-35 1.9E-39 322.0 21.8 240 677-943 1-246 (323)
194 cd05069 PTKc_Yes Catalytic dom 100.0 1.6E-34 3.4E-39 310.2 23.0 252 676-952 6-259 (260)
195 cd05039 PTKc_Csk_like Catalyti 100.0 1.4E-34 3E-39 310.0 22.4 250 675-953 5-256 (256)
196 PHA03209 serine/threonine kina 100.0 1.1E-34 2.3E-39 325.7 22.5 192 675-881 65-256 (357)
197 cd05044 PTKc_c-ros Catalytic d 100.0 9E-35 2E-39 313.9 20.9 252 682-952 1-269 (269)
198 PTZ00266 NIMA-related protein 100.0 8.7E-35 1.9E-39 345.6 22.4 258 672-949 9-295 (1021)
199 cd05115 PTKc_Zap-70 Catalytic 100.0 1.3E-34 2.9E-39 309.9 21.8 247 683-953 2-255 (257)
200 cd05597 STKc_DMPK_like Catalyt 100.0 1.2E-34 2.6E-39 322.1 22.1 255 676-950 1-267 (331)
201 cd05043 PTK_Ryk Pseudokinase d 100.0 9.2E-35 2E-39 315.8 20.6 262 675-955 5-278 (280)
202 KOG0444 Cytoskeletal regulator 100.0 7.9E-38 1.7E-42 335.1 -3.4 363 73-492 7-373 (1255)
203 cd05602 STKc_SGK1 Catalytic do 100.0 6.7E-35 1.4E-39 323.5 19.8 239 682-947 1-245 (325)
204 KOG1025 Epidermal growth facto 100.0 2.6E-35 5.7E-40 325.7 16.3 255 677-955 697-959 (1177)
205 cd05116 PTKc_Syk Catalytic dom 100.0 1.2E-34 2.6E-39 310.5 21.1 246 683-953 2-255 (257)
206 cd05066 PTKc_EphR_A Catalytic 100.0 1.1E-34 2.3E-39 312.9 20.8 255 676-953 4-266 (267)
207 cd05627 STKc_NDR2 Catalytic do 100.0 3.1E-35 6.8E-40 331.0 17.1 251 677-949 2-293 (360)
208 cd05623 STKc_MRCK_alpha Cataly 100.0 1.6E-34 3.5E-39 321.4 22.5 254 676-949 1-266 (332)
209 cd07875 STKc_JNK1 Catalytic do 100.0 1.4E-34 2.9E-39 326.5 22.2 262 674-950 22-319 (364)
210 cd07853 STKc_NLK Catalytic dom 100.0 8.3E-35 1.8E-39 329.1 20.5 262 677-950 1-289 (372)
211 cd06615 PKc_MEK Catalytic doma 100.0 2.2E-34 4.9E-39 316.9 23.4 262 677-951 2-289 (308)
212 PHA03207 serine/threonine kina 100.0 1.6E-34 3.4E-39 328.4 22.8 265 675-951 91-377 (392)
213 cd06656 STKc_PAK3 Catalytic do 100.0 1.7E-34 3.7E-39 316.0 22.3 250 675-949 18-269 (297)
214 cd05060 PTKc_Syk_like Catalyti 100.0 1.9E-34 4.2E-39 309.0 22.2 247 682-953 1-255 (257)
215 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.2E-34 2.5E-39 318.4 20.8 264 674-949 4-286 (301)
216 cd05047 PTKc_Tie Catalytic dom 100.0 1.6E-34 3.4E-39 312.0 21.4 250 682-953 1-268 (270)
217 cd05582 STKc_RSK_N N-terminal 100.0 3.9E-35 8.5E-40 324.5 16.9 237 682-945 2-245 (318)
218 cd05034 PTKc_Src_like Catalyti 100.0 1.9E-34 4.1E-39 309.9 21.8 254 675-952 5-260 (261)
219 cd08227 PK_STRAD_alpha Pseudok 100.0 2.8E-34 6E-39 319.0 23.6 263 680-949 2-307 (327)
220 cd05604 STKc_SGK3 Catalytic do 100.0 6.9E-35 1.5E-39 323.4 18.5 237 682-945 1-243 (325)
221 cd05603 STKc_SGK2 Catalytic do 100.0 9.5E-35 2.1E-39 321.9 19.6 236 682-944 1-242 (321)
222 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.7E-34 3.8E-39 314.2 21.3 261 675-956 4-273 (284)
223 KOG4279 Serine/threonine prote 100.0 1.8E-35 4E-40 320.4 13.2 247 682-949 581-832 (1226)
224 cd05624 STKc_MRCK_beta Catalyt 100.0 1.6E-34 3.6E-39 320.9 21.3 254 676-949 1-266 (331)
225 cd00192 PTKc Catalytic domain 100.0 2.6E-34 5.7E-39 308.8 22.2 251 682-951 1-262 (262)
226 cd08221 STKc_Nek9 Catalytic do 100.0 3.2E-34 7E-39 307.2 22.7 250 677-950 1-254 (256)
227 cd07861 STKc_CDK1_euk Catalyti 100.0 1.7E-34 3.7E-39 314.7 20.8 264 677-949 1-282 (285)
228 cd06640 STKc_MST4 Catalytic do 100.0 4.2E-34 9.2E-39 309.9 23.6 249 676-951 4-255 (277)
229 cd05110 PTKc_HER4 Catalytic do 100.0 1.6E-34 3.5E-39 317.4 20.4 259 675-957 6-272 (303)
230 cd06651 STKc_MEKK3 Catalytic d 100.0 4.1E-34 8.8E-39 308.2 23.1 249 677-949 3-261 (266)
231 cd06628 STKc_MAPKKK_Byr2_like 100.0 2.9E-34 6.4E-39 309.6 21.9 249 677-949 1-264 (267)
232 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.2E-34 2.6E-39 315.5 19.1 259 677-953 5-283 (284)
233 cd06609 STKc_MST3_like Catalyt 100.0 2.5E-34 5.5E-39 311.3 21.4 247 677-949 2-251 (274)
234 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.5E-34 3.3E-39 314.8 19.8 260 676-953 4-283 (284)
235 cd07867 STKc_CDC2L6 Catalytic 100.0 4.8E-34 1E-38 316.2 24.0 200 681-884 6-219 (317)
236 cd06638 STKc_myosinIIIA Cataly 100.0 2.5E-34 5.5E-39 313.4 21.4 258 673-950 15-284 (286)
237 PTZ00284 protein kinase; Provi 100.0 3.7E-34 8E-39 333.0 24.0 263 674-951 127-440 (467)
238 cd05057 PTKc_EGFR_like Catalyt 100.0 2.5E-34 5.4E-39 312.2 21.1 257 675-955 6-270 (279)
239 cd06655 STKc_PAK2 Catalytic do 100.0 2.6E-34 5.6E-39 314.3 21.3 250 676-950 19-270 (296)
240 cd08223 STKc_Nek4 Catalytic do 100.0 4.2E-34 9.1E-39 306.4 22.5 249 677-949 1-254 (257)
241 cd06645 STKc_MAP4K3 Catalytic 100.0 1.8E-34 3.9E-39 311.2 19.5 252 676-949 9-265 (267)
242 cd06643 STKc_SLK Catalytic dom 100.0 3.1E-34 6.7E-39 311.9 21.3 251 678-951 7-264 (282)
243 cd05042 PTKc_Aatyk Catalytic d 100.0 2.7E-34 6E-39 310.1 20.7 254 682-950 1-267 (269)
244 cd05112 PTKc_Itk Catalytic dom 100.0 3.5E-34 7.5E-39 306.9 21.3 251 676-951 4-256 (256)
245 cd06644 STKc_STK10_LOK Catalyt 100.0 5.1E-34 1.1E-38 311.9 23.0 253 676-951 12-271 (292)
246 cd05073 PTKc_Hck Catalytic dom 100.0 3.9E-34 8.5E-39 307.1 21.6 253 675-952 5-259 (260)
247 cd05085 PTKc_Fer Catalytic dom 100.0 4.5E-34 9.9E-39 304.8 21.8 245 682-951 1-249 (250)
248 cd08528 STKc_Nek10 Catalytic d 100.0 5.5E-34 1.2E-38 307.8 22.5 255 677-952 1-269 (269)
249 cd06605 PKc_MAPKK Catalytic do 100.0 3.5E-34 7.6E-39 308.6 20.8 252 677-949 2-257 (265)
250 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.8E-34 6.1E-39 321.4 20.7 259 675-950 14-299 (343)
251 cd08217 STKc_Nek2 Catalytic do 100.0 5.9E-34 1.3E-38 306.7 22.3 254 677-949 1-262 (265)
252 KOG0983 Mitogen-activated prot 100.0 3.5E-35 7.6E-40 286.5 11.4 253 676-951 92-351 (391)
253 cd05041 PTKc_Fes_like Catalyti 100.0 6.3E-34 1.4E-38 303.9 22.2 247 682-952 1-251 (251)
254 cd06613 STKc_MAP4K3_like Catal 100.0 8E-34 1.7E-38 305.2 23.1 253 676-949 3-260 (262)
255 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.3E-33 2.8E-38 307.8 25.0 262 677-951 2-268 (287)
256 cd07847 STKc_CDKL1_4 Catalytic 100.0 8.6E-34 1.9E-38 309.3 23.6 262 676-949 1-283 (286)
257 cd06624 STKc_ASK Catalytic dom 100.0 6.8E-34 1.5E-38 306.8 22.6 253 676-949 8-265 (268)
258 cd05083 PTKc_Chk Catalytic dom 100.0 3.6E-34 7.9E-39 306.3 20.3 247 676-952 6-253 (254)
259 cd06642 STKc_STK25-YSK1 Cataly 100.0 2.4E-34 5.2E-39 311.9 19.0 247 677-950 5-254 (277)
260 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 5.4E-34 1.2E-38 310.8 21.9 253 677-950 2-263 (286)
261 cd08218 STKc_Nek1 Catalytic do 100.0 8.6E-34 1.9E-38 303.8 22.8 249 677-949 1-253 (256)
262 KOG0596 Dual specificity; seri 100.0 5.3E-35 1.1E-39 311.7 13.1 253 675-951 360-629 (677)
263 cd06629 STKc_MAPKKK_Bck1_like 100.0 6E-34 1.3E-38 308.0 21.6 254 677-949 2-269 (272)
264 cd07839 STKc_CDK5 Catalytic do 100.0 2.6E-34 5.6E-39 313.0 18.7 262 677-949 1-281 (284)
265 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.3E-33 2.7E-38 304.6 23.9 257 676-949 1-264 (267)
266 cd06652 STKc_MEKK2 Catalytic d 100.0 9.6E-34 2.1E-38 305.1 22.9 250 676-949 2-261 (265)
267 cd05040 PTKc_Ack_like Catalyti 100.0 5.5E-34 1.2E-38 305.5 20.8 249 682-952 1-257 (257)
268 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.1E-33 2.3E-38 303.8 23.0 239 682-951 1-262 (262)
269 KOG0986 G protein-coupled rece 100.0 4.6E-35 1E-39 304.7 11.7 254 674-949 183-446 (591)
270 cd06632 STKc_MEKK1_plant Catal 100.0 6.3E-34 1.4E-38 305.2 20.9 247 677-949 1-255 (258)
271 cd06617 PKc_MKK3_6 Catalytic d 100.0 6.1E-34 1.3E-38 309.9 20.9 251 677-949 2-261 (283)
272 cd05586 STKc_Sck1_like Catalyt 100.0 1.1E-34 2.4E-39 322.6 15.3 240 684-949 1-253 (330)
273 cd05574 STKc_phototropin_like 100.0 6.6E-34 1.4E-38 314.8 21.4 252 677-949 2-289 (316)
274 cd08220 STKc_Nek8 Catalytic do 100.0 1.3E-33 2.7E-38 302.5 22.9 248 677-949 1-253 (256)
275 cd05058 PTKc_Met_Ron Catalytic 100.0 7.7E-34 1.7E-38 305.4 20.8 250 682-954 1-260 (262)
276 cd06611 STKc_SLK_like Catalyti 100.0 5.2E-34 1.1E-38 309.9 19.5 253 676-951 5-264 (280)
277 cd06636 STKc_MAP4K4_6 Catalyti 100.0 7.4E-34 1.6E-38 309.0 20.7 253 674-949 14-279 (282)
278 KOG0666 Cyclin C-dependent kin 100.0 8.5E-35 1.8E-39 288.8 12.0 207 674-884 22-243 (438)
279 cd06631 STKc_YSK4 Catalytic do 100.0 9.8E-34 2.1E-38 305.1 21.4 250 677-949 1-262 (265)
280 cd07844 STKc_PCTAIRE_like Cata 100.0 9.1E-34 2E-38 309.8 21.4 264 675-949 4-288 (291)
281 cd07832 STKc_CCRK Catalytic do 100.0 1.3E-33 2.7E-38 308.0 22.2 262 677-949 1-282 (286)
282 cd05046 PTK_CCK4 Pseudokinase 100.0 9.7E-34 2.1E-38 306.9 21.1 258 676-952 5-275 (275)
283 cd06608 STKc_myosinIII_like Ca 100.0 9.8E-34 2.1E-38 306.8 21.2 256 674-949 4-272 (275)
284 cd05056 PTKc_FAK Catalytic dom 100.0 8.9E-34 1.9E-38 306.3 20.6 255 676-955 6-267 (270)
285 cd06630 STKc_MEKK1 Catalytic d 100.0 1.1E-33 2.4E-38 305.2 21.3 253 677-949 1-264 (268)
286 KOG4250 TANK binding protein k 100.0 1.2E-34 2.6E-39 319.4 13.7 270 677-954 14-311 (732)
287 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.6E-34 5.7E-39 308.0 16.1 239 682-951 1-258 (258)
288 cd06639 STKc_myosinIIIB Cataly 100.0 1.5E-33 3.3E-38 308.0 22.4 256 674-949 20-287 (291)
289 cd07842 STKc_CDK8_like Catalyt 100.0 1.2E-33 2.6E-38 313.0 21.6 269 677-949 1-313 (316)
290 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.5E-33 3.2E-38 302.6 21.6 238 682-951 1-259 (259)
291 smart00219 TyrKc Tyrosine kina 100.0 1.7E-33 3.7E-38 301.9 21.9 250 678-950 1-258 (258)
292 cd06917 STKc_NAK1_like Catalyt 100.0 1.6E-33 3.6E-38 305.5 21.5 248 677-950 2-256 (277)
293 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 2E-33 4.3E-38 303.8 22.0 238 683-951 2-274 (274)
294 cd06641 STKc_MST3 Catalytic do 100.0 2.4E-33 5.2E-38 304.0 22.6 246 677-949 5-253 (277)
295 cd06647 STKc_PAK_I Catalytic d 100.0 1.8E-33 4E-38 307.2 21.8 250 675-949 18-269 (293)
296 cd07846 STKc_CDKL2_3 Catalytic 100.0 5E-34 1.1E-38 311.1 17.3 262 676-949 1-283 (286)
297 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.4E-33 3.1E-38 305.3 20.6 257 678-953 1-272 (273)
298 cd06607 STKc_TAO Catalytic dom 100.0 2.6E-33 5.7E-38 308.5 23.0 247 676-951 15-269 (307)
299 cd06616 PKc_MKK4 Catalytic dom 100.0 1.7E-33 3.8E-38 307.1 20.9 256 677-949 5-267 (288)
300 cd05580 STKc_PKA Catalytic dom 100.0 4E-33 8.6E-38 304.4 23.7 245 676-950 1-255 (290)
301 cd07841 STKc_CDK7 Catalytic do 100.0 3.5E-33 7.5E-38 306.4 23.2 261 677-949 1-282 (298)
302 cd07870 STKc_PFTAIRE2 Catalyti 100.0 4.5E-33 9.7E-38 304.3 23.7 264 675-949 4-288 (291)
303 KOG4645 MAPKKK (MAP kinase kin 100.0 2.4E-35 5.2E-40 342.2 5.6 252 677-951 1236-1496(1509)
304 KOG0618 Serine/threonine phosp 100.0 3.7E-36 8.1E-41 338.4 -1.1 442 75-562 47-510 (1081)
305 KOG0584 Serine/threonine prote 100.0 2.8E-34 6.1E-39 312.7 13.5 245 679-949 43-296 (632)
306 cd05086 PTKc_Aatyk2 Catalytic 100.0 4.1E-33 8.8E-38 300.6 22.5 253 683-951 2-267 (268)
307 cd06623 PKc_MAPKK_plant_like C 100.0 6.4E-33 1.4E-37 298.5 23.9 250 677-949 2-256 (264)
308 KOG0690 Serine/threonine prote 100.0 1.5E-34 3.2E-39 288.1 10.2 251 672-949 164-424 (516)
309 cd05609 STKc_MAST Catalytic do 100.0 5.1E-33 1.1E-37 305.9 23.5 254 677-952 2-273 (305)
310 cd07833 STKc_CDKL Catalytic do 100.0 3E-33 6.5E-38 305.3 21.4 262 677-949 2-285 (288)
311 cd07860 STKc_CDK2_3 Catalytic 100.0 1.7E-33 3.7E-38 306.6 19.1 262 677-949 1-281 (284)
312 cd08225 STKc_Nek5 Catalytic do 100.0 2.9E-33 6.2E-38 300.0 20.4 249 677-949 1-254 (257)
313 cd06658 STKc_PAK5 Catalytic do 100.0 1.5E-33 3.2E-38 307.7 18.3 247 678-949 24-272 (292)
314 cd06659 STKc_PAK6 Catalytic do 100.0 2E-33 4.4E-38 307.4 19.2 247 679-950 24-272 (297)
315 cd06635 STKc_TAO1 Catalytic do 100.0 8E-33 1.7E-37 305.9 24.0 250 677-955 26-283 (317)
316 KOG0579 Ste20-like serine/thre 100.0 1.8E-34 3.9E-39 309.5 9.9 252 677-951 33-291 (1187)
317 cd06626 STKc_MEKK4 Catalytic d 100.0 6.5E-33 1.4E-37 298.5 22.1 252 677-949 1-261 (264)
318 cd07850 STKc_JNK Catalytic dom 100.0 5.8E-33 1.3E-37 311.8 22.5 264 673-950 13-312 (353)
319 cd07837 STKc_CdkB_plant Cataly 100.0 4.6E-33 1E-37 305.0 21.1 267 676-949 1-291 (295)
320 cd07843 STKc_CDC2L1 Catalytic 100.0 4.7E-33 1E-37 304.5 21.1 264 675-949 4-290 (293)
321 KOG1035 eIF-2alpha kinase GCN2 100.0 6.6E-34 1.4E-38 329.0 14.5 254 673-948 476-870 (1351)
322 cd05578 STKc_Yank1 Catalytic d 100.0 3.3E-33 7.1E-38 299.7 19.1 247 677-948 1-254 (258)
323 cd08530 STKc_CNK2-like Catalyt 100.0 4.7E-33 1E-37 298.1 20.0 249 677-949 1-253 (256)
324 cd06606 STKc_MAPKKK Catalytic 100.0 1E-32 2.2E-37 296.0 22.4 251 677-949 1-257 (260)
325 cd07836 STKc_Pho85 Catalytic d 100.0 8.7E-33 1.9E-37 301.0 22.0 264 677-949 1-281 (284)
326 KOG0612 Rho-associated, coiled 100.0 2.8E-34 6.1E-39 329.2 10.6 272 675-969 74-368 (1317)
327 PHA03390 pk1 serine/threonine- 100.0 1.5E-32 3.2E-37 295.8 23.2 245 675-949 13-262 (267)
328 cd05122 PKc_STE Catalytic doma 100.0 1.3E-32 2.8E-37 293.8 22.5 249 677-949 1-251 (253)
329 cd06614 STKc_PAK Catalytic dom 100.0 1.1E-32 2.4E-37 300.4 22.4 257 674-953 17-274 (286)
330 cd05577 STKc_GRK Catalytic dom 100.0 1.1E-32 2.3E-37 299.0 21.9 244 684-949 1-254 (277)
331 cd06648 STKc_PAK_II Catalytic 100.0 1.6E-32 3.4E-37 298.8 23.1 247 678-949 21-269 (285)
332 cd07845 STKc_CDK10 Catalytic d 100.0 9.9E-33 2.2E-37 304.3 21.8 268 674-953 5-294 (309)
333 cd05633 STKc_GRK3 Catalytic do 100.0 9.5E-33 2.1E-37 299.3 21.1 242 683-950 1-256 (279)
334 cd07831 STKc_MOK Catalytic dom 100.0 1.3E-32 2.8E-37 299.3 22.2 258 678-949 1-279 (282)
335 PLN00009 cyclin-dependent kina 100.0 1.5E-32 3.2E-37 300.7 22.6 264 676-949 2-284 (294)
336 cd08226 PK_STRAD_beta Pseudoki 100.0 2E-32 4.3E-37 304.3 23.9 263 682-951 4-310 (328)
337 KOG4236 Serine/threonine prote 100.0 5.7E-34 1.2E-38 300.2 10.7 246 680-950 568-820 (888)
338 cd05572 STKc_cGK_PKG Catalytic 100.0 8.9E-33 1.9E-37 297.1 20.4 242 684-949 1-252 (262)
339 cd07849 STKc_ERK1_2_like Catal 100.0 6.3E-33 1.4E-37 309.4 19.8 267 676-954 5-299 (336)
340 cd07835 STKc_CDK1_like Catalyt 100.0 6E-33 1.3E-37 302.1 19.2 262 678-949 1-280 (283)
341 PHA03210 serine/threonine kina 100.0 5.2E-33 1.1E-37 324.1 19.8 274 672-950 144-455 (501)
342 KOG0586 Serine/threonine prote 100.0 4E-33 8.6E-38 303.7 17.0 252 673-952 53-309 (596)
343 KOG0604 MAP kinase-activated p 100.0 2E-33 4.4E-38 278.0 12.7 258 676-954 61-327 (400)
344 cd07852 STKc_MAPK15 Catalytic 100.0 1.7E-32 3.7E-37 306.2 21.8 265 673-949 4-295 (337)
345 cd08215 STKc_Nek Catalytic dom 100.0 1.7E-32 3.8E-37 293.9 21.0 251 677-949 1-255 (258)
346 cd06653 STKc_MEKK3_like_1 Cata 100.0 2.7E-32 5.7E-37 293.7 22.3 249 677-949 3-261 (264)
347 cd07865 STKc_CDK9 Catalytic do 100.0 3E-32 6.6E-37 300.8 23.2 266 674-949 10-307 (310)
348 KOG1006 Mitogen-activated prot 100.0 5.2E-35 1.1E-39 284.5 0.5 255 679-949 67-327 (361)
349 PHA02882 putative serine/threo 100.0 2.9E-32 6.3E-37 297.8 22.0 258 676-951 12-294 (294)
350 cd06657 STKc_PAK4 Catalytic do 100.0 2.4E-32 5.2E-37 298.0 20.4 245 680-949 24-270 (292)
351 cd07864 STKc_CDK12 Catalytic d 100.0 3.5E-32 7.6E-37 299.1 21.7 267 672-949 3-299 (302)
352 cd05118 STKc_CMGC Catalytic do 100.0 4E-32 8.6E-37 295.7 21.5 260 678-949 1-280 (283)
353 cd06633 STKc_TAO3 Catalytic do 100.0 5.6E-32 1.2E-36 298.4 22.9 243 678-949 23-273 (313)
354 cd06634 STKc_TAO2 Catalytic do 100.0 3.3E-32 7.1E-37 299.7 20.7 249 677-954 16-272 (308)
355 cd07840 STKc_CDK9_like Catalyt 100.0 6.5E-32 1.4E-36 294.6 22.7 261 678-949 1-284 (287)
356 KOG0662 Cyclin-dependent kinas 100.0 1.4E-32 3E-37 251.8 14.1 262 677-949 3-283 (292)
357 cd06627 STKc_Cdc7_like Catalyt 100.0 6E-32 1.3E-36 289.1 21.5 247 677-949 1-251 (254)
358 cd07855 STKc_ERK5 Catalytic do 100.0 2.5E-32 5.5E-37 304.3 18.9 266 676-952 5-297 (334)
359 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2.6E-32 5.7E-37 304.4 19.0 266 676-954 5-298 (337)
360 cd07838 STKc_CDK4_6_like Catal 100.0 1.7E-31 3.7E-36 291.3 24.7 261 678-949 1-284 (287)
361 cd08216 PK_STRAD Pseudokinase 100.0 7.4E-32 1.6E-36 298.2 22.0 257 688-951 12-297 (314)
362 cd06618 PKc_MKK7 Catalytic dom 100.0 4.9E-32 1.1E-36 296.7 20.0 255 674-951 13-275 (296)
363 cd07830 STKc_MAK_like Catalyti 100.0 5.6E-32 1.2E-36 294.4 20.3 260 678-949 1-280 (283)
364 cd05606 STKc_beta_ARK Catalyti 100.0 7.5E-32 1.6E-36 292.2 21.2 242 683-950 1-256 (278)
365 cd05579 STKc_MAST_like Catalyt 100.0 2.9E-32 6.2E-37 293.5 17.8 245 684-951 1-256 (265)
366 KOG0200 Fibroblast/platelet-de 100.0 2.9E-32 6.3E-37 322.1 19.4 258 678-953 298-579 (609)
367 cd05581 STKc_PDK1 Catalytic do 100.0 4.5E-32 9.8E-37 294.7 19.4 249 676-949 1-277 (280)
368 cd07834 STKc_MAPK Catalytic do 100.0 1.1E-31 2.4E-36 299.0 22.7 270 677-957 1-299 (330)
369 PTZ00024 cyclin-dependent prot 100.0 9.2E-32 2E-36 300.1 21.6 265 676-951 8-315 (335)
370 cd05611 STKc_Rim15_like Cataly 100.0 1.1E-31 2.3E-36 288.3 21.1 240 682-948 2-247 (260)
371 cd07866 STKc_BUR1 Catalytic do 100.0 5.8E-32 1.3E-36 298.7 19.4 267 674-949 6-308 (311)
372 KOG0607 MAP kinase-interacting 100.0 7.4E-33 1.6E-37 275.8 10.8 256 682-950 84-362 (463)
373 cd07879 STKc_p38delta_MAPK13 C 100.0 1.3E-31 2.8E-36 299.3 21.6 265 676-957 15-307 (342)
374 cd08222 STKc_Nek11 Catalytic d 100.0 1.3E-31 2.8E-36 287.7 19.8 250 677-949 1-257 (260)
375 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.4E-31 3E-36 299.1 20.6 263 676-949 5-300 (342)
376 cd07880 STKc_p38gamma_MAPK12 C 100.0 2.5E-31 5.4E-36 297.0 22.4 258 675-949 14-298 (343)
377 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.7E-31 5.9E-36 296.9 22.4 262 674-951 15-302 (345)
378 cd05583 STKc_MSK_N N-terminal 100.0 2.1E-31 4.6E-36 290.6 21.0 254 677-952 1-266 (288)
379 cd05613 STKc_MSK1_N N-terminal 100.0 3E-31 6.6E-36 289.7 22.1 251 677-949 1-268 (290)
380 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 5.4E-31 1.2E-35 292.2 24.2 259 674-949 8-288 (328)
381 cd07829 STKc_CDK_like Catalyti 100.0 1.8E-31 4E-36 290.2 19.9 260 678-949 1-279 (282)
382 cd07851 STKc_p38 Catalytic dom 100.0 1.2E-31 2.5E-36 299.8 18.4 258 675-949 14-298 (343)
383 KOG1290 Serine/threonine prote 100.0 2.9E-31 6.4E-36 279.2 19.6 153 655-813 56-222 (590)
384 cd07857 STKc_MPK1 Catalytic do 100.0 3.3E-31 7.1E-36 295.1 20.4 263 677-950 1-293 (332)
385 cd05123 STKc_AGC Catalytic dom 100.0 6.9E-31 1.5E-35 280.2 21.5 238 684-948 1-246 (250)
386 cd05610 STKc_MASTL Catalytic d 100.0 6.7E-31 1.4E-35 315.8 23.5 145 675-827 3-152 (669)
387 KOG0671 LAMMER dual specificit 100.0 4.1E-32 8.9E-37 278.7 10.6 265 672-950 85-407 (415)
388 KOG1024 Receptor-like protein 100.0 2.1E-31 4.5E-36 272.3 14.6 260 676-954 284-556 (563)
389 cd05576 STKc_RPK118_like Catal 100.0 5.7E-31 1.2E-35 278.1 18.0 220 687-943 4-223 (237)
390 KOG0696 Serine/threonine prote 100.0 7.2E-32 1.6E-36 276.8 10.6 243 672-941 345-593 (683)
391 KOG0603 Ribosomal protein S6 k 100.0 2.4E-31 5.1E-36 291.5 13.2 244 675-952 321-566 (612)
392 KOG0587 Traf2- and Nck-interac 100.0 1.4E-30 3.1E-35 292.5 19.0 254 675-950 18-283 (953)
393 KOG0669 Cyclin T-dependent kin 100.0 5.7E-33 1.2E-37 267.9 -0.3 269 674-952 15-318 (376)
394 KOG1151 Tousled-like protein k 100.0 1.6E-31 3.5E-36 276.3 8.6 257 675-948 462-740 (775)
395 KOG0695 Serine/threonine prote 100.0 1.2E-30 2.6E-35 261.0 13.0 201 674-884 248-454 (593)
396 KOG0984 Mitogen-activated prot 100.0 1E-30 2.2E-35 245.5 10.2 202 676-884 46-255 (282)
397 PLN03225 Serine/threonine-prot 100.0 6.2E-30 1.3E-34 299.3 18.2 266 674-950 130-451 (566)
398 KOG0614 cGMP-dependent protein 100.0 1.6E-31 3.4E-36 281.4 3.7 254 672-951 416-679 (732)
399 KOG0608 Warts/lats-like serine 100.0 7.7E-30 1.7E-34 274.6 16.5 203 676-886 629-876 (1034)
400 KOG1027 Serine/threonine prote 100.0 2E-30 4.3E-35 290.0 8.4 247 679-949 512-767 (903)
401 smart00220 S_TKc Serine/Threon 100.0 5.1E-29 1.1E-33 264.2 18.8 238 688-949 1-241 (244)
402 KOG0664 Nemo-like MAPK-related 100.0 5.7E-31 1.2E-35 256.6 0.6 265 678-952 55-346 (449)
403 PLN03224 probable serine/threo 100.0 1.5E-28 3.2E-33 279.6 19.8 261 675-950 144-501 (507)
404 KOG0668 Casein kinase II, alph 100.0 2.9E-29 6.3E-34 239.1 10.9 262 674-950 36-323 (338)
405 KOG1152 Signal transduction se 100.0 6.1E-29 1.3E-33 266.1 9.9 199 672-882 557-770 (772)
406 KOG0665 Jun-N-terminal kinase 100.0 1.2E-28 2.5E-33 247.4 10.6 256 676-950 17-311 (369)
407 KOG0670 U4/U6-associated splic 99.9 2.9E-28 6.2E-33 257.6 9.9 279 662-950 418-747 (752)
408 cd00180 PKc Catalytic domain o 99.9 2.6E-26 5.7E-31 237.5 22.1 210 684-950 1-215 (215)
409 KOG1167 Serine/threonine prote 99.9 2.6E-27 5.6E-32 247.3 9.3 265 675-950 35-382 (418)
410 KOG1345 Serine/threonine kinas 99.9 2.3E-27 5E-32 231.9 8.2 249 675-946 23-281 (378)
411 KOG0576 Mitogen-activated prot 99.9 1.3E-27 2.8E-32 260.4 3.1 252 676-949 15-271 (829)
412 KOG4237 Extracellular matrix p 99.9 9.3E-28 2E-32 246.7 -1.5 417 66-515 51-498 (498)
413 smart00221 STYKc Protein kinas 99.9 7.6E-25 1.7E-29 229.3 19.0 198 678-883 1-202 (225)
414 PLN03210 Resistant to P. syrin 99.9 9.6E-24 2.1E-28 268.3 27.7 363 72-515 531-903 (1153)
415 PLN03210 Resistant to P. syrin 99.9 4.5E-24 9.7E-29 271.3 23.3 346 161-563 551-904 (1153)
416 PLN00181 protein SPA1-RELATED; 99.9 2.5E-24 5.3E-29 266.0 9.5 199 727-951 28-267 (793)
417 KOG4237 Extracellular matrix p 99.9 1.3E-25 2.8E-30 231.0 -1.5 405 112-562 60-498 (498)
418 PRK15387 E3 ubiquitin-protein 99.9 2.2E-23 4.7E-28 245.0 16.7 264 194-549 202-465 (788)
419 smart00750 KIND kinase non-cat 99.9 5.4E-23 1.2E-27 206.4 15.6 167 756-953 1-169 (176)
420 PRK15387 E3 ubiquitin-protein 99.9 5.2E-23 1.1E-27 241.8 15.7 263 245-575 205-468 (788)
421 KOG1165 Casein kinase (serine/ 99.9 2.4E-22 5.2E-27 202.6 18.0 205 677-889 29-244 (449)
422 KOG0195 Integrin-linked kinase 99.9 5.8E-24 1.3E-28 207.8 4.7 249 676-954 190-447 (448)
423 PRK15370 E3 ubiquitin-protein 99.9 3.3E-22 7.1E-27 237.1 19.0 305 13-350 46-380 (754)
424 KOG1163 Casein kinase (serine/ 99.9 1.4E-22 3E-27 195.3 11.6 206 673-886 12-226 (341)
425 PRK09188 serine/threonine prot 99.9 3.1E-22 6.7E-27 218.4 14.3 165 673-855 15-194 (365)
426 KOG1164 Casein kinase (serine/ 99.9 3.7E-21 8E-26 211.8 20.2 260 677-955 19-299 (322)
427 KOG0590 Checkpoint kinase and 99.8 5.5E-22 1.2E-26 231.1 7.1 254 679-949 321-585 (601)
428 PRK15370 E3 ubiquitin-protein 99.8 3.7E-21 8.1E-26 228.2 13.7 245 195-494 180-428 (754)
429 COG0515 SPS1 Serine/threonine 99.8 2.6E-19 5.6E-24 199.9 23.6 258 678-949 2-275 (384)
430 PF14531 Kinase-like: Kinase-l 99.8 1.7E-19 3.6E-24 188.1 13.3 233 678-940 14-288 (288)
431 KOG1240 Protein kinase contain 99.8 2.3E-20 4.9E-25 214.8 6.4 248 677-952 24-294 (1431)
432 cd05147 RIO1_euk RIO kinase fa 99.8 4.1E-19 8.8E-24 178.6 12.1 139 681-830 2-168 (190)
433 PRK10359 lipopolysaccharide co 99.8 2.6E-19 5.7E-24 181.1 9.8 169 674-875 29-216 (232)
434 KOG0617 Ras suppressor protein 99.8 5.9E-21 1.3E-25 174.5 -4.3 158 124-287 36-194 (264)
435 cd05145 RIO1_like RIO kinase f 99.8 3.6E-18 7.8E-23 172.7 15.0 139 681-831 2-169 (190)
436 KOG4158 BRPK/PTEN-induced prot 99.8 7.8E-19 1.7E-23 181.1 10.0 195 729-948 274-509 (598)
437 PRK12274 serine/threonine prot 99.8 4E-18 8.6E-23 168.3 13.9 185 679-884 5-210 (218)
438 KOG0603 Ribosomal protein S6 k 99.8 2.7E-19 5.9E-24 197.1 3.5 224 683-943 1-232 (612)
439 KOG0617 Ras suppressor protein 99.8 2.7E-20 5.8E-25 170.3 -3.7 168 92-264 28-195 (264)
440 cd00116 LRR_RI Leucine-rich re 99.8 5E-20 1.1E-24 204.1 -2.7 273 77-349 2-319 (319)
441 cd00116 LRR_RI Leucine-rich re 99.7 5.3E-20 1.1E-24 203.9 -2.9 107 148-254 2-121 (319)
442 KOG1023 Natriuretic peptide re 99.7 8.6E-18 1.9E-22 186.3 12.2 218 725-956 1-227 (484)
443 KOG1166 Mitotic checkpoint ser 99.7 1.9E-17 4.1E-22 196.0 13.5 195 675-879 697-901 (974)
444 PRK10345 hypothetical protein; 99.7 9.8E-17 2.1E-21 162.5 14.5 134 679-826 5-156 (210)
445 smart00090 RIO RIO-like kinase 99.7 2.2E-16 4.7E-21 164.4 12.5 141 678-831 30-200 (237)
446 KOG1033 eIF-2alpha kinase PEK/ 99.6 9.3E-17 2E-21 174.0 4.2 176 744-946 329-509 (516)
447 KOG0606 Microtubule-associated 99.6 2E-16 4.4E-21 182.8 6.6 214 676-946 83-309 (1205)
448 PRK14879 serine/threonine prot 99.6 2.5E-15 5.5E-20 155.5 14.1 132 682-828 2-143 (211)
449 TIGR03724 arch_bud32 Kae1-asso 99.6 3E-15 6.6E-20 153.3 13.3 128 683-828 1-138 (199)
450 PRK09605 bifunctional UGMP fam 99.6 5.7E-15 1.2E-19 174.0 16.6 135 675-828 332-476 (535)
451 PLN03150 hypothetical protein; 99.6 2.7E-15 5.8E-20 178.3 13.3 148 29-179 370-526 (623)
452 cd05144 RIO2_C RIO kinase fami 99.6 3.2E-15 6.9E-20 152.7 11.9 134 678-830 17-176 (198)
453 cd05120 APH_ChoK_like Aminogly 99.5 7.9E-14 1.7E-18 135.9 12.3 135 680-828 2-138 (155)
454 cd05119 RIO RIO kinase family, 99.5 1.3E-13 2.7E-18 139.7 12.0 134 681-830 2-165 (187)
455 KOG0590 Checkpoint kinase and 99.5 1.7E-15 3.7E-20 177.0 -2.3 257 675-949 19-286 (601)
456 PRK01723 3-deoxy-D-manno-octul 99.5 2.9E-13 6.2E-18 141.4 13.6 133 681-828 36-191 (239)
457 COG4886 Leucine-rich repeat (L 99.4 1.9E-13 4E-18 156.0 9.7 198 125-355 97-295 (394)
458 KOG0532 Leucine-rich repeat (L 99.4 1.8E-14 3.9E-19 156.0 0.2 179 339-551 77-255 (722)
459 KOG0532 Leucine-rich repeat (L 99.4 8.2E-15 1.8E-19 158.6 -2.7 151 192-350 74-224 (722)
460 PLN03150 hypothetical protein; 99.4 2.5E-13 5.5E-18 161.5 9.1 93 459-551 420-512 (623)
461 COG4886 Leucine-rich repeat (L 99.4 4.2E-13 9.1E-18 153.0 8.2 158 187-350 110-268 (394)
462 KOG1243 Protein kinase [Genera 99.3 1.7E-11 3.7E-16 137.2 14.9 168 694-877 30-199 (690)
463 TIGR01982 UbiB 2-polyprenylphe 99.3 1.3E-11 2.9E-16 140.3 12.8 142 676-830 118-308 (437)
464 KOG0601 Cyclin-dependent kinas 99.3 4.9E-12 1.1E-16 140.7 7.3 247 677-948 115-378 (524)
465 KOG1266 Protein kinase [Signal 99.3 7.8E-12 1.7E-16 127.1 7.7 208 725-953 121-335 (458)
466 PRK04750 ubiB putative ubiquin 99.2 9.8E-12 2.1E-16 142.4 7.2 146 674-831 118-316 (537)
467 KOG1259 Nischarin, modulator o 99.2 3E-12 6.6E-17 128.1 1.8 127 194-326 285-412 (490)
468 KOG1259 Nischarin, modulator o 99.2 3.4E-12 7.4E-17 127.7 0.3 136 381-547 280-416 (490)
469 cd05151 ChoK Choline Kinase (C 99.2 1E-10 2.2E-15 116.4 9.7 126 681-827 3-135 (170)
470 KOG3207 Beta-tubulin folding c 99.1 9.6E-12 2.1E-16 131.4 1.2 161 118-278 118-284 (505)
471 KOG0531 Protein phosphatase 1, 99.1 1E-11 2.2E-16 141.7 1.2 251 94-358 69-326 (414)
472 KOG1909 Ran GTPase-activating 99.1 6.6E-12 1.4E-16 129.2 -0.4 233 73-325 30-310 (382)
473 KOG1909 Ran GTPase-activating 99.1 2E-12 4.3E-17 133.0 -4.6 240 89-350 22-311 (382)
474 KOG3207 Beta-tubulin folding c 99.1 9.9E-12 2.1E-16 131.3 -0.8 207 94-302 118-339 (505)
475 PF14580 LRR_9: Leucine-rich r 99.1 1E-10 2.3E-15 113.8 5.9 108 96-206 18-126 (175)
476 cd05146 RIO3_euk RIO kinase fa 99.1 2.4E-09 5.1E-14 106.5 14.0 135 682-830 3-175 (197)
477 KOG0531 Protein phosphatase 1, 99.0 3E-11 6.4E-16 137.9 -0.4 127 217-350 49-175 (414)
478 KOG4658 Apoptotic ATPase [Sign 99.0 3E-10 6.5E-15 137.9 7.8 292 97-438 523-824 (889)
479 KOG0601 Cyclin-dependent kinas 99.0 2E-10 4.2E-15 128.1 4.3 250 672-954 261-519 (524)
480 PF14580 LRR_9: Leucine-rich r 99.0 3.2E-10 7E-15 110.4 4.9 38 119-157 17-55 (175)
481 PF08263 LRRNT_2: Leucine rich 99.0 3.8E-10 8.2E-15 82.4 3.9 40 30-69 2-43 (43)
482 KOG0606 Microtubule-associated 99.0 1.2E-10 2.5E-15 135.9 1.8 248 674-944 802-1084(1205)
483 KOG4658 Apoptotic ATPase [Sign 99.0 5E-10 1.1E-14 136.0 6.4 105 194-299 546-652 (889)
484 COG3642 Mn2+-dependent serine/ 98.9 1.4E-08 3E-13 96.8 11.9 128 682-827 2-139 (204)
485 cd05154 ACAD10_11_like Acyl-Co 98.9 1E-08 2.2E-13 106.9 10.9 139 682-827 4-205 (223)
486 KOG3087 Serine/threonine prote 98.9 2.9E-08 6.3E-13 93.9 12.5 140 680-827 11-164 (229)
487 COG4248 Uncharacterized protei 98.9 7.2E-08 1.6E-12 102.1 16.5 265 679-953 14-300 (637)
488 PF13855 LRR_8: Leucine rich r 98.8 3.1E-09 6.7E-14 85.0 2.4 60 482-541 2-61 (61)
489 KOG3741 Poly(A) ribonuclease s 98.7 2.5E-07 5.5E-12 100.8 15.9 170 688-879 288-474 (655)
490 PF13855 LRR_8: Leucine rich r 98.7 4.8E-09 1.1E-13 83.9 2.2 59 434-492 2-60 (61)
491 KOG1859 Leucine-rich repeat pr 98.7 4.7E-10 1E-14 125.2 -5.1 107 430-542 184-292 (1096)
492 PRK15123 lipopolysaccharide co 98.7 3.1E-07 6.8E-12 96.9 14.6 137 683-827 29-193 (268)
493 KOG4579 Leucine-rich repeat (L 98.7 1.6E-09 3.5E-14 96.6 -2.2 139 434-576 28-170 (177)
494 COG0478 RIO-like serine/threon 98.6 2.6E-07 5.5E-12 93.7 10.8 133 679-829 94-252 (304)
495 KOG2137 Protein kinase [Signal 98.6 1.3E-08 2.9E-13 114.9 1.2 151 783-948 106-264 (700)
496 PF01163 RIO1: RIO1 family; I 98.6 5.4E-07 1.2E-11 89.5 12.1 124 691-830 1-157 (188)
497 KOG1859 Leucine-rich repeat pr 98.5 7.9E-09 1.7E-13 115.7 -3.8 127 385-518 164-292 (1096)
498 COG5238 RNA1 Ran GTPase-activa 98.5 2.2E-08 4.7E-13 99.7 -1.3 236 93-350 26-316 (388)
499 KOG2982 Uncharacterized conser 98.4 3.9E-08 8.4E-13 99.2 -0.3 19 380-398 244-262 (418)
500 KOG2982 Uncharacterized conser 98.4 2.4E-08 5.2E-13 100.7 -2.6 61 96-156 70-133 (418)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2e-112 Score=1080.17 Aligned_cols=895 Identities=34% Similarity=0.614 Sum_probs=658.2
Q ss_pred chHHHHHHHHHHHhcCCCcccccCCCCCCCCCCCcceeeeCCCCCceEEEeecCCCCCccccccccCCCCCcEEeCCCCc
Q 002063 29 LNVETQALIQFKSKLKDPHGVLDSWKESADSPCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNV 108 (973)
Q Consensus 29 ~~~~~~aLl~~k~~~~d~~~~l~~W~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~ 108 (973)
.+.|++||++||+++.||.+.+++|+.. ++||.|.||+|++ .++|+.|+|++++++|.+++.+..+++|++|+|++|+
T Consensus 27 ~~~~~~~l~~~~~~~~~~~~~~~~w~~~-~~~c~w~gv~c~~-~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~ 104 (968)
T PLN00113 27 HAEELELLLSFKSSINDPLKYLSNWNSS-ADVCLWQGITCNN-SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQ 104 (968)
T ss_pred CHHHHHHHHHHHHhCCCCcccCCCCCCC-CCCCcCcceecCC-CCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCc
Confidence 4689999999999999998889999754 4589999999986 5799999999999999999999999999999999999
Q ss_pred ccCccCcccc-CCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCccccccccccccceEEccCCcCCC-----
Q 002063 109 LSGKLPLELS-NCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDE----- 182 (973)
Q Consensus 109 l~~~~p~~l~-~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~----- 182 (973)
+++.+|..+. .+++|++|+|++|++.+.+|. +.+++|++|+|++|.+++.+|..++++++|++|++++|.+..
T Consensus 105 ~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~-~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~ 183 (968)
T PLN00113 105 LSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR-GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNS 183 (968)
T ss_pred cCCcCChHHhccCCCCCEEECcCCccccccCc-cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChh
Confidence 9999998765 888888888888887654442 334455555555555554555555555555555555554432
Q ss_pred ------------------CCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhcccccc
Q 002063 183 ------------------AEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLW 244 (973)
Q Consensus 183 ------------------~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 244 (973)
..+|..++++++|++|+|++|++++.+|..++++++|++|++++|++++.+|..++++++|+
T Consensus 184 ~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 263 (968)
T PLN00113 184 LTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQ 263 (968)
T ss_pred hhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCC
Confidence 12344445555555555555555555555555555555555555555555555555555555
Q ss_pred EEEeecccCCCCCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccc
Q 002063 245 KIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNR 324 (973)
Q Consensus 245 ~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 324 (973)
+|+|++|.+++.+|..+.++++|++|++++|.+.+.+|..+.++++|+.|++++|.+.+.+|..++.+++|+.|++++|.
T Consensus 264 ~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~ 343 (968)
T PLN00113 264 YLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNK 343 (968)
T ss_pred EEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCC
Confidence 55555555555555555555555555555555555555555666666666666666666666666666666666666666
Q ss_pred cCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCcc
Q 002063 325 FSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDG 404 (973)
Q Consensus 325 l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 404 (973)
+.+.+|..++.+++|+.|++++|++++.+|..++....+..+...+|++.+.+|..+..+++|+.|+|++|++++.+|..
T Consensus 344 l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~ 423 (968)
T PLN00113 344 FSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSE 423 (968)
T ss_pred CcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChh
Confidence 66666666666777777777777777777777766665555555567777788888888888899999999888888888
Q ss_pred ccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCC
Q 002063 405 LWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLS 484 (973)
Q Consensus 405 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 484 (973)
|..++.|+.|++++|++++.++..+..+++|+.|+|++|++.+.+|..+ ..++|+.|+|++|++++.+|..+.++++|+
T Consensus 424 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~ 502 (968)
T PLN00113 424 FTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELM 502 (968)
T ss_pred HhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccC
Confidence 8889999999999999988888888888899999999999988888765 458899999999999999999999999999
Q ss_pred EEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCccCCCCCchhhccc-CceEEccCCc
Q 002063 485 SLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQ 563 (973)
Q Consensus 485 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~l~ls~N~ 563 (973)
.|+|++|++++.+|..++++++|+.|+|++|.+++.+|..|..+++|+.|+|++|+++|.+|..+..+. |+.+++++|+
T Consensus 503 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~ 582 (968)
T PLN00113 503 QLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNH 582 (968)
T ss_pred EEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999886 9999999999
Q ss_pred cccccCcc--cccCCCCccccCCCCCccCcccccccCCCCCCCccccccCCCCcCcchhhHHHHHHHHHHHHHHHHhhee
Q 002063 564 LSGSVPLD--FLRMGGDGAFAGNEGLCLDQSTKMLMNSKLTACPAIQKQKGGFKDKLVLFCIIAVALAAFLAGLLLVSYK 641 (973)
Q Consensus 564 l~~~~p~~--~~~~~~~~~~~~n~~lc~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (973)
+.|.+|.. |..+.. .++.||+.+||.+... ..++|..... ...+..++.+++++++.+++++++++.++
T Consensus 583 l~~~~p~~~~~~~~~~-~~~~~n~~lc~~~~~~-----~~~~c~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (968)
T PLN00113 583 LHGSLPSTGAFLAINA-SAVAGNIDLCGGDTTS-----GLPPCKRVRK---TPSWWFYITCTLGAFLVLALVAFGFVFIR 653 (968)
T ss_pred ceeeCCCcchhcccCh-hhhcCCccccCCcccc-----CCCCCccccc---cceeeeehhHHHHHHHHHHHHHHHHHHHH
Confidence 99999974 444443 7899999999975431 1344543211 11122222222222222222222222222
Q ss_pred cccccccccccccccccccccccccc-----cccCHHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHH
Q 002063 642 NFKLSADMENGEKEVSSKWKLASFHH-----IDIDAEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVK 716 (973)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~ 716 (973)
+++. ...+..+.+ ...|+...+.. ... ......|...+.||+|+||+||+|++..++..||||++......
T Consensus 654 ~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~- 729 (968)
T PLN00113 654 GRNN-LELKRVENE-DGTWELQFFDSKVSKSITI-NDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI- 729 (968)
T ss_pred hhhc-ccccccccc-cccccccccccccchhhhH-HHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc-
Confidence 2211 111111100 01122111111 111 22345678888999999999999999888999999988653322
Q ss_pred HHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcC
Q 002063 717 VFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDC 796 (973)
Q Consensus 717 ~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~ 796 (973)
..+|++++++++||||+++++++.+++..|+||||+++|+|.++++. ++|..+.+++.|+|+|++|+|+.+
T Consensus 730 -~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~--------l~~~~~~~i~~~ia~~L~yLH~~~ 800 (968)
T PLN00113 730 -PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN--------LSWERRRKIAIGIAKALRFLHCRC 800 (968)
T ss_pred -cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc--------CCHHHHHHHHHHHHHHHHHhccCC
Confidence 24578999999999999999999999999999999999999999962 689999999999999999999877
Q ss_pred CCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh
Q 002063 797 SPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT 876 (973)
Q Consensus 797 ~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~ 876 (973)
+++|+||||||+||+++.++.+++. ||........ ....+++.|+|||++.+..++.++|||||||++|||++
T Consensus 801 ~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~t 873 (968)
T PLN00113 801 SPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD------TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLT 873 (968)
T ss_pred CCCeecCCCCHHhEEECCCCceEEE-eccccccccC------CCccccccccCcccccCCCCCcccchhhHHHHHHHHHh
Confidence 7899999999999999999888876 6654332111 12357899999999999999999999999999999999
Q ss_pred CCCCCCcccCCCccHHHHHHHhhcccccchhhccccccC--hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 877 GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVAS--ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 877 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
|+.||+...+.......|+....... ....++++.... ....+...++.+++.+||+.||++||+|.||+++|+++.
T Consensus 874 g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~ 952 (968)
T PLN00113 874 GKSPADAEFGVHGSIVEWARYCYSDC-HLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESAS 952 (968)
T ss_pred CCCCCCcccCCCCcHHHHHHHhcCcc-chhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhh
Confidence 99999766555666777765443222 123344443322 223455667889999999999999999999999999886
Q ss_pred CCC
Q 002063 955 PCT 957 (973)
Q Consensus 955 ~~~ 957 (973)
...
T Consensus 953 ~~~ 955 (968)
T PLN00113 953 RSS 955 (968)
T ss_pred ccc
Confidence 533
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.7e-57 Score=574.51 Aligned_cols=489 Identities=34% Similarity=0.560 Sum_probs=419.4
Q ss_pred CCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCC-C-cCCCCCCCEEeccCcccCCccccccccccccceEE
Q 002063 97 QSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP-D-LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLS 174 (973)
Q Consensus 97 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~-~-l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 174 (973)
.+++.|+|++|++++.+|..|..+++|++|+|++|++.+..| . +..+++|++|+|++|.+++.+|. +.+++|++|+
T Consensus 69 ~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~ 146 (968)
T PLN00113 69 SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLD 146 (968)
T ss_pred CcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEE
Confidence 468999999999999999999999999999999999987665 4 55999999999999999988875 5689999999
Q ss_pred ccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCC
Q 002063 175 IGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLT 254 (973)
Q Consensus 175 l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 254 (973)
+++|.++. .+|..++++++|++|+|++|.+.+.+|..++++++|++|+|++|++.+.+|..++++++|++|+|++|+++
T Consensus 147 Ls~n~~~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 225 (968)
T PLN00113 147 LSNNMLSG-EIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLS 225 (968)
T ss_pred CcCCcccc-cCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccC
Confidence 99999863 57899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCcccc
Q 002063 255 GELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLG 334 (973)
Q Consensus 255 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~ 334 (973)
+.+|..++++++|++|++++|.+.+.+|..++++++|+.|++++|++.+.+|..+.++++|+.|++++|.+.+.+|..+.
T Consensus 226 ~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~ 305 (968)
T PLN00113 226 GEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVI 305 (968)
T ss_pred CcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccCCCCcceE
Q 002063 335 RYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGML 414 (973)
Q Consensus 335 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 414 (973)
.+++|+.|++++|.+.+.+|..++.++++..+.+.+|++.+.+|..++.+++|+.|+|++|++.+.+|..++.+++|+.|
T Consensus 306 ~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L 385 (968)
T PLN00113 306 QLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKL 385 (968)
T ss_pred CCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEE
Confidence 99999999999999999999888888877666666778888888888888889999999888888888777777777777
Q ss_pred eccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccc---------------
Q 002063 415 DFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGA--------------- 479 (973)
Q Consensus 415 ~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~--------------- 479 (973)
++++|++.+..+..++.+++|+.|+|++|++++.+|..+..+++|+.|++++|++++.+|..+..
T Consensus 386 ~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~ 465 (968)
T PLN00113 386 ILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFF 465 (968)
T ss_pred ECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceee
Confidence 77777776666666666666666666666666666666655555555555555555544443332
Q ss_pred --------cccCCEEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCccCCCCCchhhc
Q 002063 480 --------LRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMK 551 (973)
Q Consensus 480 --------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 551 (973)
.++|+.|+|++|++++.+|..+.++++|+.|+|++|++++.+|..+..+++|++|+|++|+++|.+|..+..
T Consensus 466 ~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 545 (968)
T PLN00113 466 GGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSE 545 (968)
T ss_pred eecCcccccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhC
Confidence 356777777788888888888889999999999999999999999999999999999999999999999998
Q ss_pred cc-CceEEccCCccccccCcccccCCC--CccccCCCCCc
Q 002063 552 LK-LSSIDLSENQLSGSVPLDFLRMGG--DGAFAGNEGLC 588 (973)
Q Consensus 552 l~-L~~l~ls~N~l~~~~p~~~~~~~~--~~~~~~n~~lc 588 (973)
++ |+.|||++|+++|.+|..+..+.. .-.+.+|+..+
T Consensus 546 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~ 585 (968)
T PLN00113 546 MPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHG 585 (968)
T ss_pred cccCCEEECCCCcccccCChhHhcCcccCEEeccCCccee
Confidence 86 999999999999999987655433 23556776554
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-46 Score=411.54 Aligned_cols=287 Identities=47% Similarity=0.748 Sum_probs=245.0
Q ss_pred cccccccccCHHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecccc--HHHHHHHHHHHHhcCCCceeeEeEE
Q 002063 662 LASFHHIDIDAEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDG--VKVFAAEMEILGKIRHRNILKLYAC 739 (973)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~ 739 (973)
...|.+.++ ..++++|...+.||+|+||.||+|...+ ++.||||++..... ..+|.+|++++.+++|||+|+++||
T Consensus 62 ~~~fs~~el-~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 62 LRSFSYDEL-RKATNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred cceeeHHHH-HHHHhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEE
Confidence 445667777 7889999999999999999999999987 58999998877544 5679999999999999999999999
Q ss_pred EEeCC-eeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCce
Q 002063 740 LLKGG-SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEP 818 (973)
Q Consensus 740 ~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 818 (973)
|.+++ +.++|||||++|+|.++++... .. .++|..|++||.++|+||+|||+.+..+||||||||+|||+|+++.+
T Consensus 140 C~e~~~~~~LVYEym~nGsL~d~L~~~~--~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~a 216 (361)
T KOG1187|consen 140 CLEGGEHRLLVYEYMPNGSLEDHLHGKK--GE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNA 216 (361)
T ss_pred EecCCceEEEEEEccCCCCHHHHhCCCC--CC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCE
Confidence 99988 5999999999999999998641 11 78999999999999999999999888899999999999999999999
Q ss_pred EEecccCCccccCCCCccccccc-CcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccc-CCCccHHHHHH
Q 002063 819 KIADFGVAKIAENSPKVSDYSCF-AGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEY-GDGKDIVYWVS 896 (973)
Q Consensus 819 kl~Dfgl~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~-~~~~~~~~~~~ 896 (973)
||+|||+|+..... ....... .||.+|+|||++..+..++++|||||||++.|+++|+.|.+... .....+..|+.
T Consensus 217 KlsDFGLa~~~~~~--~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~ 294 (361)
T KOG1187|consen 217 KLSDFGLAKLGPEG--DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAK 294 (361)
T ss_pred EccCccCcccCCcc--ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHH
Confidence 99999999654331 1111112 79999999999999999999999999999999999999988654 34455888886
Q ss_pred Hhhcccccchhhcccccc-ChhhH-HHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCC
Q 002063 897 THLNNHENVLKVLDCEVA-SESIK-EDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPC 956 (973)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 956 (973)
...... .+.+++|+... ..... +...++.+++.+|++.+|.+||+|.||+++|+.+...
T Consensus 295 ~~~~~~-~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 295 PLLEEG-KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HHHHCc-chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 666665 58899999876 44443 6788899999999999999999999999999665544
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-46 Score=383.43 Aligned_cols=256 Identities=31% Similarity=0.419 Sum_probs=217.1
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec---cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCC-eeEEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK---GDGVKVFAAEMEILGKIRHRNILKLYACLLKGG-SSFLVL 750 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-~~~lv~ 750 (973)
..+.+..+.||+|..|+|||++++.+++.+|+|++.- +...+++.+|++++++.+||+||+++++|..+. ..+++|
T Consensus 78 ~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~m 157 (364)
T KOG0581|consen 78 LSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICM 157 (364)
T ss_pred HHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeeh
Confidence 3456778899999999999999999999999999843 445678899999999999999999999999988 599999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
|||++|+|.+++... ..+++....+++.++++||.|||+ +++||||||||+|||+...|+|||||||.+....
T Consensus 158 EYMDgGSLd~~~k~~-----g~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lv 230 (364)
T KOG0581|consen 158 EYMDGGSLDDILKRV-----GRIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILV 230 (364)
T ss_pred hhcCCCCHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhh
Confidence 999999999999853 458899999999999999999995 4899999999999999999999999999998775
Q ss_pred CCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcc
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
+. ....++||..|||||.+.+..|+.++||||||++++|+.+|+.||........++...........+
T Consensus 231 nS----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~pp------- 299 (364)
T KOG0581|consen 231 NS----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPP------- 299 (364)
T ss_pred hh----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCC-------
Confidence 54 2234789999999999999999999999999999999999999998753333444444333332222
Q ss_pred ccccChhhH-HHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 911 CEVASESIK-EDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 911 ~~~~~~~~~-~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
+..+. .+.+++.+|+..|+++||.+||++.|+++|-.-
T Consensus 300 ----P~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi 338 (364)
T KOG0581|consen 300 ----PRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFI 338 (364)
T ss_pred ----CCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHH
Confidence 11222 467789999999999999999999999987543
No 5
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.5e-45 Score=377.10 Aligned_cols=255 Identities=30% Similarity=0.349 Sum_probs=209.3
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc---------cHHHHHHHHHHHHhcCCCceeeEeEEEEeCC
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD---------GVKVFAAEMEILGKIRHRNILKLYACLLKGG 744 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~---------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 744 (973)
..+.|.+.+.||+|+||.|-+|..+.+|+.||||++.+.. ......+|+++|++++|||||+++++|+.++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 4456788999999999999999999999999999997621 1223579999999999999999999999999
Q ss_pred eeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCC---CceEEe
Q 002063 745 SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED---YEPKIA 821 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~---~~~kl~ 821 (973)
..||||||++||+|.+.+-.+ ..+....-..+++|++.|+.||| ++||+||||||+|||+..+ ..+||+
T Consensus 250 s~YmVlE~v~GGeLfd~vv~n-----k~l~ed~~K~~f~Qll~avkYLH---~~GI~HRDiKPeNILl~~~~e~~llKIt 321 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVAN-----KYLREDLGKLLFKQLLTAVKYLH---SQGIIHRDIKPENILLSNDAEDCLLKIT 321 (475)
T ss_pred ceEEEEEEecCccHHHHHHhc-----cccccchhHHHHHHHHHHHHHHH---HcCcccccCCcceEEeccCCcceEEEec
Confidence 999999999999999999754 23455556789999999999999 8999999999999999766 679999
Q ss_pred cccCCccccCCCCcccccccCcccccccccccccCC--CC-ccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHh
Q 002063 822 DFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCK--VS-EKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTH 898 (973)
Q Consensus 822 Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~-~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~ 898 (973)
|||+|+..+.. .-....+||+.|.|||++.++. +. .++|+||+||+||-+++|..||.+.+.+..-..+...+.
T Consensus 322 DFGlAK~~g~~---sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~ 398 (475)
T KOG0615|consen 322 DFGLAKVSGEG---SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGR 398 (475)
T ss_pred ccchhhccccc---eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCc
Confidence 99999977643 3344578999999999997664 33 478999999999999999999988754332211111111
Q ss_pred hcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 899 LNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
. .+.+..+.+..++.++++.+|+..||++||+++|+++|-+
T Consensus 399 y------------~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW 439 (475)
T KOG0615|consen 399 Y------------AFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPW 439 (475)
T ss_pred c------------cccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChh
Confidence 1 1223456677888999999999999999999999998755
No 6
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-44 Score=388.46 Aligned_cols=254 Identities=37% Similarity=0.518 Sum_probs=208.6
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCce-EEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCC-eeEEEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGT-VAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGG-SSFLVL 750 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~-vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-~~~lv~ 750 (973)
.....+.||+|+||+||+|.+. |+. ||||++... ...++|.+|+.++.+++|||||+++|++.++. ..++||
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVt 119 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVT 119 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEE
Confidence 3345566999999999999998 455 999998762 22568999999999999999999999999887 799999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCC-eEecCCCCCCeeecCCC-ceEEecccCCcc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPP-IIHRDIKSSNILLDEDY-EPKIADFGVAKI 828 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~-ivH~Dlkp~Nill~~~~-~~kl~Dfgl~~~ 828 (973)
||+++|+|.++++.. ....+++..+..+|.|||+||+||| +.+ ||||||||+|||++.++ ++||+|||+++.
T Consensus 120 Ey~~~GsL~~~l~~~---~~~~l~~~~~l~~aldiArGm~YLH---~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~ 193 (362)
T KOG0192|consen 120 EYMPGGSLSVLLHKK---RKRKLPLKVRLRIALDIARGMEYLH---SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSRE 193 (362)
T ss_pred EeCCCCcHHHHHhhc---ccCCCCHHHHHHHHHHHHHHHHHHh---cCCCeeecccChhhEEEcCCCCEEEECCCcccee
Confidence 999999999999863 3567999999999999999999999 666 99999999999999998 999999999986
Q ss_pred ccCCCCcccccccCcccccccccccc--cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAY--TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
..... ...+...||+.|||||++. ...|+.++||||||+++|||+||+.||..... ......+
T Consensus 194 ~~~~~--~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~--~~~~~~v----------- 258 (362)
T KOG0192|consen 194 KVISK--TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP--VQVASAV----------- 258 (362)
T ss_pred ecccc--ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH--HHHHHHH-----------
Confidence 65432 2333467999999999999 66999999999999999999999999987532 1111111
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
......+..+..+...+..++.+||+.||.+||++.+++..|+.+..
T Consensus 259 --~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~ 305 (362)
T KOG0192|consen 259 --VVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS 305 (362)
T ss_pred --HhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence 11111122223356678899999999999999999999999997654
No 7
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-44 Score=367.56 Aligned_cols=201 Identities=32% Similarity=0.512 Sum_probs=181.5
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc----cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
....+|...+.||+|+||+||+|+++.++..||||.+.+.. ..+-+..|+.+|+.++|||||++++++..++..|+
T Consensus 7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~l 86 (429)
T KOG0595|consen 7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYL 86 (429)
T ss_pred cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEE
Confidence 44578999999999999999999999999999999987643 45567889999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCC------CceEEec
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED------YEPKIAD 822 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~------~~~kl~D 822 (973)
|||||+||+|.+|++++ ..+++.....++.|+|.||++|| +++||||||||+|||++.. -.+||+|
T Consensus 87 VMEyC~gGDLs~yi~~~-----~~l~e~t~r~Fm~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIAD 158 (429)
T KOG0595|consen 87 VMEYCNGGDLSDYIRRR-----GRLPEATARHFMQQLASALQFLH---ENNIIHRDLKPQNILLSTTARNDTSPVLKIAD 158 (429)
T ss_pred EEEeCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCCCceEEecc
Confidence 99999999999999975 36889999999999999999999 8999999999999999865 4589999
Q ss_pred ccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcc
Q 002063 823 FGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEE 884 (973)
Q Consensus 823 fgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~ 884 (973)
||+|+.+.+... ....+|++.|||||+++..+|+.|+|+||+|+++|+|++|+.||+..
T Consensus 159 FGfAR~L~~~~~---a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 159 FGFARFLQPGSM---AETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred cchhhhCCchhH---HHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 999998875432 23468999999999999999999999999999999999999999743
No 8
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5e-45 Score=357.05 Aligned_cols=262 Identities=22% Similarity=0.340 Sum_probs=215.1
Q ss_pred HHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec----cccHHHHHHHHHHHHhcCCCceeeEeE-EEEeCCe-
Q 002063 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK----GDGVKVFAAEMEILGKIRHRNILKLYA-CLLKGGS- 745 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~-~~~~~~~- 745 (973)
.....+|++.++||+|.||+||++.+..+|..||.|.+.. ....++...|+.+|++++|||||++++ .|.++..
T Consensus 15 ~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~ev 94 (375)
T KOG0591|consen 15 QKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEV 94 (375)
T ss_pred cccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchh
Confidence 3455688999999999999999999999999999998875 345567889999999999999999998 4555555
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCC-CeEecCCCCCCeeecCCCceEEeccc
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSP-PIIHRDIKSSNILLDEDYEPKIADFG 824 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~-~ivH~Dlkp~Nill~~~~~~kl~Dfg 824 (973)
.++|||||++|+|...++.. +.....+++..+++++.|++.||.++|....+ -|+||||||.||+++.+|.+|++|||
T Consensus 95 lnivmE~c~~GDLsqmIk~~-K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfG 173 (375)
T KOG0591|consen 95 LNIVMELCDAGDLSQMIKHF-KKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFG 173 (375)
T ss_pred hHHHHHhhcccCHHHHHHHH-HhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccch
Confidence 89999999999999999875 55667799999999999999999999953222 38899999999999999999999999
Q ss_pred CCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccccc
Q 002063 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
+++.+.... ......+|||.||+||.+.+.+|+.++||||+||++|||+.-+.||.+. .+...-
T Consensus 174 L~r~l~s~~--tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~L~--------- 237 (375)
T KOG0591|consen 174 LGRFLSSKT--TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLSLC--------- 237 (375)
T ss_pred hHhHhcchh--HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHHHH---------
Confidence 999886542 2334578999999999999999999999999999999999999999764 221111
Q ss_pred chhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.++..+++.+-...-++..+.+++..|+..||+.||+...+++.+.
T Consensus 238 -~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 238 -KKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred -HHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 1222233333333567788999999999999999998555554443
No 9
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.9e-43 Score=382.30 Aligned_cols=248 Identities=27% Similarity=0.386 Sum_probs=212.4
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec-----cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~-----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
.+|+..+.||+|||++||.+++..+|+.||+|++.+ ....+...+|+++.+.++|||||+++++|++.+.+|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 679999999999999999999999999999999876 455677889999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
|+|++++|..++++ +..+++.+++.+..||+.|+.||| +++|+|||||..|+|++++.++||+|||+|..+.
T Consensus 98 ELC~~~sL~el~Kr-----rk~ltEpEary~l~QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le 169 (592)
T KOG0575|consen 98 ELCHRGSLMELLKR-----RKPLTEPEARYFLRQIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLE 169 (592)
T ss_pred EecCCccHHHHHHh-----cCCCCcHHHHHHHHHHHHHHHHHH---hcCceecccchhheeecCcCcEEecccceeeeec
Confidence 99999999999984 356899999999999999999999 8899999999999999999999999999999887
Q ss_pred CCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcc
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
.... .....+||+.|.|||++....++..+||||+||++|.|+.|++||+.. ++...........
T Consensus 170 ~~~E--rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk-----~vkety~~Ik~~~-------- 234 (592)
T KOG0575|consen 170 YDGE--RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK-----TVKETYNKIKLNE-------- 234 (592)
T ss_pred Cccc--ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc-----hHHHHHHHHHhcC--------
Confidence 5432 334468999999999999999999999999999999999999999754 1222211111111
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
+ ..+.....+..++|.++++++|.+|||+++|+.+=
T Consensus 235 --Y--~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~ 270 (592)
T KOG0575|consen 235 --Y--SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHP 270 (592)
T ss_pred --c--ccccccCHHHHHHHHHHhcCCcccCCCHHHHhcCH
Confidence 1 11223445567899999999999999999999763
No 10
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-43 Score=380.68 Aligned_cols=256 Identities=32% Similarity=0.417 Sum_probs=214.8
Q ss_pred CcccCeecccCcEEEEEEEEcCCCceEEEEEeec-cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCC
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNG 756 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 756 (973)
+..++.||+|.||+||.|.+.. ...||+|.++. ....++|.+|+++|++++|++||++++++..++.+|||||||+.|
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~G 286 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKG 286 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcC-CCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccC
Confidence 4678899999999999999985 45899999887 445688999999999999999999999999988999999999999
Q ss_pred chHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcc
Q 002063 757 NLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVS 836 (973)
Q Consensus 757 sL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 836 (973)
+|.+||+.. ....+...+...++.|||+||+||+ ++++|||||.++||||+++..+||+|||+|+....... .
T Consensus 287 sLl~yLr~~---~~~~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y-~ 359 (468)
T KOG0197|consen 287 SLLDYLRTR---EGGLLNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEY-T 359 (468)
T ss_pred cHHHHhhhc---CCCccchHHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeeccCceEEEcccccccccCCCce-e
Confidence 999999862 4566888999999999999999999 88999999999999999999999999999995443322 2
Q ss_pred cccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhccccccC
Q 002063 837 DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVAS 915 (973)
Q Consensus 837 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
......-+..|.|||++..++++.++|||||||+|||++| |+.||.... .... .+.++...+-
T Consensus 360 ~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms-----n~ev-----------~~~le~GyRl 423 (468)
T KOG0197|consen 360 ASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS-----NEEV-----------LELLERGYRL 423 (468)
T ss_pred ecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCC-----HHHH-----------HHHHhccCcC
Confidence 2222344678999999999999999999999999999999 999987641 1111 1222233333
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCC
Q 002063 916 ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCT 957 (973)
Q Consensus 916 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 957 (973)
..+..++..+++++..||+.+|++|||+..+...++++....
T Consensus 424 p~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~ 465 (468)
T KOG0197|consen 424 PRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTST 465 (468)
T ss_pred CCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence 445567778999999999999999999999999998876543
No 11
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-43 Score=358.44 Aligned_cols=243 Identities=30% Similarity=0.374 Sum_probs=204.9
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeE
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
...++|++.++||+|+||+||+++.+++++.+|+|++++. .+.+...+|..++.+++||+||+++..|++++..|
T Consensus 22 ~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLy 101 (357)
T KOG0598|consen 22 VGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLY 101 (357)
T ss_pred CChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEE
Confidence 4467899999999999999999999999999999999873 35667889999999999999999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+|+||+.||.|+..|++. ..+++..+.-++.+|+.||.||| +.+|||||+||+|||++.+|+++|+|||+++
T Consensus 102 lVld~~~GGeLf~hL~~e-----g~F~E~~arfYlaEi~lAL~~LH---~~gIiyRDlKPENILLd~~GHi~LtDFgL~k 173 (357)
T KOG0598|consen 102 LVLDYLNGGELFYHLQRE-----GRFSEDRARFYLAEIVLALGYLH---SKGIIYRDLKPENILLDEQGHIKLTDFGLCK 173 (357)
T ss_pred EEEeccCCccHHHHHHhc-----CCcchhHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHeeecCCCcEEEeccccch
Confidence 999999999999999853 46888888899999999999999 8999999999999999999999999999998
Q ss_pred cccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 828 IAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
...... ......+||+.|||||++.+..|+.++|+||+|+++|||++|..||... +...+........-
T Consensus 174 ~~~~~~--~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~-----~~~~~~~~I~~~k~---- 242 (357)
T KOG0598|consen 174 EDLKDG--DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAE-----DVKKMYDKILKGKL---- 242 (357)
T ss_pred hcccCC--CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCc-----cHHHHHHHHhcCcC----
Confidence 543321 2233478999999999999999999999999999999999999999654 33344443333320
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCC
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRP 941 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp 941 (973)
...+.-......+++.+.+..||++|.
T Consensus 243 -------~~~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 243 -------PLPPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred -------CCCCccCCHHHHHHHHHHhccCHHHhc
Confidence 111112344567888899999999995
No 12
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=4e-43 Score=347.28 Aligned_cols=262 Identities=23% Similarity=0.329 Sum_probs=205.0
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecccc----HHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDG----VKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
+.|+...++|+|+||+|||++++++|+.||||++...++ .+-..||++++++++|||+|.++++|......++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 468888899999999999999999999999999876333 3446789999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
||+. ++.+-+.++ ....+...+..+.+|++.|+.|+| ++++|||||||+|||++.+|.+|+||||+|+....
T Consensus 82 ~~dh-TvL~eLe~~----p~G~~~~~vk~~l~Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~ 153 (396)
T KOG0593|consen 82 YCDH-TVLHELERY----PNGVPSELVKKYLYQLLKAIHFCH---KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA 153 (396)
T ss_pred ecch-HHHHHHHhc----cCCCCHHHHHHHHHHHHHHhhhhh---hcCeecccCChhheEEecCCcEEeccchhhHhhcC
Confidence 9977 444555543 223678889999999999999999 88999999999999999999999999999998763
Q ss_pred CCCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhc----------
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLN---------- 900 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~---------- 900 (973)
. ...++..+.|.+|+|||.+.| .+|+.++||||+||++.||++|...|.+. .+.|-.+.+...+.
T Consensus 154 p--gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~--SDiDQLy~I~ktLG~L~prhq~iF 229 (396)
T KOG0593|consen 154 P--GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGR--SDIDQLYLIRKTLGNLIPRHQSIF 229 (396)
T ss_pred C--cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCc--chHHHHHHHHHHHcccCHHHHHHh
Confidence 2 234556788999999999887 68999999999999999999999988654 22222222211111
Q ss_pred -ccccchh-----hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 901 -NHENVLK-----VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 901 -~~~~~~~-----~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
..+.... .-+.+......+.....+++++.+|++.||++|++-++++.|
T Consensus 230 ~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 230 SSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred ccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 1111111 111111112233344568899999999999999999988754
No 13
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=1.6e-46 Score=383.90 Aligned_cols=475 Identities=27% Similarity=0.391 Sum_probs=403.9
Q ss_pred eEEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCc
Q 002063 75 VTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSIN 154 (973)
Q Consensus 75 v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n 154 (973)
...+++++|.+. .+.+.+.+|..|++|++++|+++ ..|.+++.+..++.|+.++|+++..|+.++.+.+|..|+.+.|
T Consensus 47 l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls~lp~~i~s~~~l~~l~~s~n 124 (565)
T KOG0472|consen 47 LQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLSELPEQIGSLISLVKLDCSSN 124 (565)
T ss_pred hhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHhhccHHHhhhhhhhhhhcccc
Confidence 466888899887 67788999999999999999998 7899999999999999999999999999999999999999999
Q ss_pred ccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccc
Q 002063 155 YFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFP 234 (973)
Q Consensus 155 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p 234 (973)
.+. ..|..++.+-.|+.|+..+|+++ .+|+.++++.+|..|++.+|+++...|..+ .++.|++||..+|.++ .+|
T Consensus 125 ~~~-el~~~i~~~~~l~dl~~~~N~i~--slp~~~~~~~~l~~l~~~~n~l~~l~~~~i-~m~~L~~ld~~~N~L~-tlP 199 (565)
T KOG0472|consen 125 ELK-ELPDSIGRLLDLEDLDATNNQIS--SLPEDMVNLSKLSKLDLEGNKLKALPENHI-AMKRLKHLDCNSNLLE-TLP 199 (565)
T ss_pred cee-ecCchHHHHhhhhhhhccccccc--cCchHHHHHHHHHHhhccccchhhCCHHHH-HHHHHHhcccchhhhh-cCC
Confidence 999 78899999999999999999997 578999999999999999999995555444 4999999999999998 899
Q ss_pred hhhhccccccEEEeecccCCCCCCccccccccccEEEeeccccccccCCccC-CCCCccEEEcccCCCCCCCCCCcCCcc
Q 002063 235 RSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIG-NLKNLTVFQCFKNNFSGEFPSGFGDMR 313 (973)
Q Consensus 235 ~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~l~ 313 (973)
..++.+.+|..|+|.+|+|. .+| +|.+++.|.+|+++.|+++ .+|.... ++.+|.+||+.+|++. +.|+.++-++
T Consensus 200 ~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLr 275 (565)
T KOG0472|consen 200 PELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLR 275 (565)
T ss_pred hhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhh
Confidence 99999999999999999999 677 8999999999999999998 7887765 8999999999999999 8899999999
Q ss_pred ccceeeccccccCCCCCccccccccccccccccccccccCChhhhh--hhhHHHHHhh-------hccCCC-----C-CC
Q 002063 314 KLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCE--KRKLLNLLAL-------SNNFSG-----E-VP 378 (973)
Q Consensus 314 ~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~--~~~ll~ll~l-------~nn~~~-----~-~p 378 (973)
+|++|++++|.|+ ..|..++++ +|+.|-+.+|.+. .+-..+-+ -...++.+-. ++.-.| . .+
T Consensus 276 sL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlr-TiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~ 352 (565)
T KOG0472|consen 276 SLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLR-TIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPS 352 (565)
T ss_pred hhhhhcccCCccc-cCCcccccc-eeeehhhcCCchH-HHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCC
Confidence 9999999999999 688899999 9999999999997 33333322 1222333222 122111 1 11
Q ss_pred Cc---ccCccccceEecccccccccCCccccCCCC---cceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChh
Q 002063 379 NS---YADCKTIQRLRISDNHLSGKIPDGLWALPN---VGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSE 452 (973)
Q Consensus 379 ~~---~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~ 452 (973)
.. .-..-+.+.|++++-+++ .+|+..|.-.+ .+.++++.|++...+......-..++.+++++|.+. .+|..
T Consensus 353 ~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~is-fv~~~ 430 (565)
T KOG0472|consen 353 ESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKIS-FVPLE 430 (565)
T ss_pred Ccccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccc-cchHH
Confidence 11 223467899999999998 77777776655 889999999998766443222223445677777776 89999
Q ss_pred hhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCC
Q 002063 453 LGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLN 532 (973)
Q Consensus 453 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 532 (973)
++.+++|..|+|++|-+. .+|..++.+..|+.||+|.|++. .+|..+..+..++.+-.++|++....|..+.+|.+|.
T Consensus 431 l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~ 508 (565)
T KOG0472|consen 431 LSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLT 508 (565)
T ss_pred HHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcc
Confidence 999999999999999998 78999999999999999999998 7888888888888888888999866666699999999
Q ss_pred eeecCCCccCCCCCchhhccc-CceEEccCCccccccCc
Q 002063 533 ALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPL 570 (973)
Q Consensus 533 ~L~L~~N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~p~ 570 (973)
+|||.+|.|. .+|..++++. |+.|++++|++. .|+
T Consensus 509 tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr--~Pr 544 (565)
T KOG0472|consen 509 TLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR--QPR 544 (565)
T ss_pred eeccCCCchh-hCChhhccccceeEEEecCCccC--CCH
Confidence 9999999998 8999999986 999999999998 554
No 14
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.2e-41 Score=384.37 Aligned_cols=265 Identities=26% Similarity=0.405 Sum_probs=219.8
Q ss_pred cCCcccCeecccCcEEEEEEEEc-----CCCceEEEEEeeccc---cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLK-----KNAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~-----~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
.+....+.||+|+||+||+|+.. ++...||||.++... ..++|+||++.+..++|||||+++|+|.+++..+
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~ 565 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC 565 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence 34567889999999999999875 234569999998743 4578999999999999999999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhcCC---------CCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCce
Q 002063 748 LVLEYMPNGNLFQALHKRVKEG---------KPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEP 818 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~---------~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 818 (973)
||+|||..|||.++|..+.... .++++..+.+.||.|||.||+||- ++.+|||||..+|+||.++..|
T Consensus 566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs---~~~FVHRDLATRNCLVge~l~V 642 (774)
T KOG1026|consen 566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS---SHHFVHRDLATRNCLVGENLVV 642 (774)
T ss_pred EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCcccccchhhhhceeccceEE
Confidence 9999999999999998653211 234788999999999999999999 8899999999999999999999
Q ss_pred EEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHH
Q 002063 819 KIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVST 897 (973)
Q Consensus 819 kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~ 897 (973)
||+|||+++..-..+.........-+++|||||.+..++|++++|||||||+|||+++ |+.||.+.. .++..+.+.
T Consensus 643 KIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glS--n~EVIe~i~- 719 (774)
T KOG1026|consen 643 KISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLS--NQEVIECIR- 719 (774)
T ss_pred EecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccc--hHHHHHHHH-
Confidence 9999999997766555443333445789999999999999999999999999999999 999997652 122222221
Q ss_pred hhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCCCC
Q 002063 898 HLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCTDK 959 (973)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~ 959 (973)
+... -..+..++.++++|+..||+..|.+||+++||-..|.......++
T Consensus 720 ------------~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~~ 768 (774)
T KOG1026|consen 720 ------------AGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASPK 768 (774)
T ss_pred ------------cCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCcc
Confidence 1111 344567788899999999999999999999999999887665543
No 15
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-42 Score=361.24 Aligned_cols=265 Identities=23% Similarity=0.319 Sum_probs=211.3
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcC-CCceeeEeEEEEeCC-eeEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIR-HRNILKLYACLLKGG-SSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~-~~~l 748 (973)
..++|.+.++||.|.||+||+|+...+++.||||++++. .+.-.-.||++.|+++. ||||+++.+++.+.+ ..|+
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 467899999999999999999999999999999988763 12223468999999998 999999999998887 9999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
|||||+ .+|++.++.+ +..+++..+..|+.||++||+|+| ++|+.|||+||+|||+.....+||+|||+|+.
T Consensus 88 VfE~Md-~NLYqLmK~R----~r~fse~~irnim~QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKiaDFGLARe 159 (538)
T KOG0661|consen 88 VFEFMD-CNLYQLMKDR----NRLFSESDIRNIMYQILQGLAHIH---KHGFFHRDLKPENILISGNDVIKIADFGLARE 159 (538)
T ss_pred eHHhhh-hhHHHHHhhc----CCcCCHHHHHHHHHHHHHHHHHHH---hcCcccccCChhheEecccceeEecccccccc
Confidence 999994 6999999864 567999999999999999999999 89999999999999999989999999999997
Q ss_pred ccCCCCcccccccCccccccccccc-ccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccccc---
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELA-YTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN--- 904 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--- 904 (973)
+.... .++..+.|..|+|||++ +.+.|+.++||||+|||++|+.+-+..|.+. .+.|-.+.+-..+....+
T Consensus 160 v~Skp---PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~--sE~Dqi~KIc~VLGtP~~~~~ 234 (538)
T KOG0661|consen 160 VRSKP---PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGA--SEIDQIYKICEVLGTPDKDSW 234 (538)
T ss_pred cccCC---CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCC--cHHHHHHHHHHHhCCCccccc
Confidence 76543 35567889999999987 5677999999999999999999999988654 222222222111111100
Q ss_pred -----chhhcc-------ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 905 -----VLKVLD-------CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 905 -----~~~~~~-------~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
+...+. +............+..+++.+|++|||.+|||+.+++++--
T Consensus 235 ~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pf 293 (538)
T KOG0661|consen 235 PEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPF 293 (538)
T ss_pred hhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcc
Confidence 000111 11111222335677889999999999999999999998753
No 16
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-41 Score=362.20 Aligned_cols=253 Identities=30% Similarity=0.401 Sum_probs=211.2
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec-----cccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCee
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-----GDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSS 746 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~-----~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 746 (973)
+...+|.+++.||+|+|++||+|+.+.+++.||||++.+ +..++-+.+|-.+|.++ .||.|++++..|.++...
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 344678899999999999999999999999999999876 34455678899999999 899999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
|+|+||+++|+|.+++++. ..+++...+.+|.+|+.|++||| ++|||||||||+|||++.||+++|+|||.|
T Consensus 150 YFvLe~A~nGdll~~i~K~-----Gsfde~caR~YAAeIldAleylH---~~GIIHRDlKPENILLd~dmhikITDFGsA 221 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKY-----GSFDETCARFYAAEILDALEYLH---SNGIIHRDLKPENILLDKDGHIKITDFGSA 221 (604)
T ss_pred EEEEEecCCCcHHHHHHHh-----CcchHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeEcCCCcEEEeecccc
Confidence 9999999999999999975 35888888899999999999999 899999999999999999999999999999
Q ss_pred ccccCCCCc-----------ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHH
Q 002063 827 KIAENSPKV-----------SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWV 895 (973)
Q Consensus 827 ~~~~~~~~~-----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~ 895 (973)
+.+.+.... .+...++||..|.+||++.....++++|+|+|||++|.|+.|++||...- +..-+
T Consensus 222 K~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N----eyliF- 296 (604)
T KOG0592|consen 222 KILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN----EYLIF- 296 (604)
T ss_pred ccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc----HHHHH-
Confidence 877543221 11245899999999999999999999999999999999999999997641 11111
Q ss_pred HHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 896 STHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.++++..+ ..++...+...+|+.+.+..||.+|+|..+|.+|.
T Consensus 297 ----------qkI~~l~y--~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp 339 (604)
T KOG0592|consen 297 ----------QKIQALDY--EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHP 339 (604)
T ss_pred ----------HHHHHhcc--cCCCCCCHHHHHHHHHHHccCccccccHHHHhhCc
Confidence 11222111 11222235577888899999999999999998874
No 17
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=9.1e-45 Score=371.10 Aligned_cols=457 Identities=25% Similarity=0.348 Sum_probs=383.0
Q ss_pred ceEEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccC
Q 002063 74 RVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSI 153 (973)
Q Consensus 74 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~ 153 (973)
-.+.++++++.++ ++|++++.+..++.|+.++|+++ ++|.+++++.+|+.|+++.|.+...+++++.+..|+.||..+
T Consensus 69 ~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~el~~~i~~~~~l~dl~~~~ 146 (565)
T KOG0472|consen 69 CLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELKELPDSIGRLLDLEDLDATN 146 (565)
T ss_pred ceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhccccceeecCchHHHHhhhhhhhccc
Confidence 4688899999998 88999999999999999999998 899999999999999999999999999999999999999999
Q ss_pred cccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeecccccccccc
Q 002063 154 NYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEF 233 (973)
Q Consensus 154 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~ 233 (973)
|+++ ..|..+..+.+|..|++.+|.+. .+|+..-+++.|++|+...|-++ .+|+.++.+.+|+.|||.+|+|. .+
T Consensus 147 N~i~-slp~~~~~~~~l~~l~~~~n~l~--~l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~l 221 (565)
T KOG0472|consen 147 NQIS-SLPEDMVNLSKLSKLDLEGNKLK--ALPENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FL 221 (565)
T ss_pred cccc-cCchHHHHHHHHHHhhccccchh--hCCHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cC
Confidence 9999 78999999999999999999997 56666666999999999999998 88999999999999999999998 67
Q ss_pred chhhhccccccEEEeecccCCCCCCcccc-ccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCc
Q 002063 234 PRSIRKLQKLWKIELYANNLTGELPAELG-NLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDM 312 (973)
Q Consensus 234 p~~l~~l~~L~~L~L~~n~l~~~~~~~l~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l 312 (973)
| .|..+..|++|+++.|+|. .+|.+.. ++++|..|||..|++. ..|+.++-+.+|+.||+++|.|+ ..|..+++|
T Consensus 222 P-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl 297 (565)
T KOG0472|consen 222 P-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL 297 (565)
T ss_pred C-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc
Confidence 7 8999999999999999999 6776655 8999999999999998 89999999999999999999999 678899999
Q ss_pred cccceeeccccccCCCCCcccccc--ccccccc-------cccccc----cccCChhhh---hhhhHHHHHhhhccCCCC
Q 002063 313 RKLFAFSIYGNRFSGPFPENLGRY--TALTDVD-------ISENQF----SGSFPKYLC---EKRKLLNLLALSNNFSGE 376 (973)
Q Consensus 313 ~~L~~L~l~~N~l~~~~~~~l~~l--~~L~~L~-------Ls~N~l----~~~~p~~~~---~~~~ll~ll~l~nn~~~~ 376 (973)
.|+.|.+.||.+...--+.+..- .-|++|. +|.-.= .+..|.+.+ ......+.+..+....+.
T Consensus 298 -hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~ 376 (565)
T KOG0472|consen 298 -HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTL 376 (565)
T ss_pred -eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhccccccccc
Confidence 99999999999873222211110 1122221 111100 011111111 112223445556666677
Q ss_pred CCCcccCccc---cceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhh
Q 002063 377 VPNSYADCKT---IQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSEL 453 (973)
Q Consensus 377 ~p~~~~~l~~---L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~ 453 (973)
+|........ .+..+++.|++. .+|..+..+..+...-+..|+..+.++..+..+++|..|+|++|-+. .+|.++
T Consensus 377 VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~ 454 (565)
T KOG0472|consen 377 VPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEM 454 (565)
T ss_pred CCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhh
Confidence 7765544444 889999999998 78888877776655444444455577778889999999999999998 799999
Q ss_pred hcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCe
Q 002063 454 GRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNA 533 (973)
Q Consensus 454 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 533 (973)
+.+..|+.|++++|+|. .+|..+..+..|+.+-.++|++..+.|..+.+|.+|..|||.+|.|. .+|..+++|++|++
T Consensus 455 ~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~h 532 (565)
T KOG0472|consen 455 GSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRH 532 (565)
T ss_pred hhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeE
Confidence 99999999999999998 89999988888888888999999888888999999999999999999 88889999999999
Q ss_pred eecCCCccCCCCCc
Q 002063 534 LNLSGNKLTGSIPD 547 (973)
Q Consensus 534 L~L~~N~l~~~~p~ 547 (973)
|+|+||+++ .++.
T Consensus 533 LeL~gNpfr-~Pr~ 545 (565)
T KOG0472|consen 533 LELDGNPFR-QPRH 545 (565)
T ss_pred EEecCCccC-CCHH
Confidence 999999999 4443
No 18
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-40 Score=342.41 Aligned_cols=262 Identities=26% Similarity=0.390 Sum_probs=215.1
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
.+.|++..+||.|..++||+|+....++.||||++.-+ .+.+.+.+|++.++.++||||++++..|..+...|+||+
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 35789999999999999999999999999999998653 446788999999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
||.+|++.+.++.....+ +++..+..|..+++.||.||| .+|.||||||+.|||++.+|.|||+|||.+..+..
T Consensus 105 fMa~GS~ldIik~~~~~G---l~E~~Ia~iLre~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYPDG---LEEASIATILREVLKALDYLH---QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFD 178 (516)
T ss_pred hhcCCcHHHHHHHHcccc---ccHHHHHHHHHHHHHHHHHHH---hcCceecccccccEEEcCCCcEEEcCceeeeeecc
Confidence 999999999998875443 788899999999999999999 88999999999999999999999999998876543
Q ss_pred CCCcc--cccccCcccccccccccc--cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 832 SPKVS--DYSCFAGTHGYIAPELAY--TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 832 ~~~~~--~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
..... +....+||+.|||||++. ...|+.|+||||||++..|+.+|..||.... ..++.-..++..++...
T Consensus 179 ~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~p-----PmkvLl~tLqn~pp~~~ 253 (516)
T KOG0582|consen 179 SGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYP-----PMKVLLLTLQNDPPTLL 253 (516)
T ss_pred cCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCC-----hHHHHHHHhcCCCCCcc
Confidence 32211 114568999999999953 4469999999999999999999999997542 22233333333332111
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
-.....+........+.+++..|+++||.+|||+++++++
T Consensus 254 --t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 254 --TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred --cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 1222333444556689999999999999999999999875
No 19
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-40 Score=345.01 Aligned_cols=276 Identities=29% Similarity=0.406 Sum_probs=216.8
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHh--cCCCceeeEeEEEEeCC----eeEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGK--IRHRNILKLYACLLKGG----SSFLV 749 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~--l~hpniv~l~~~~~~~~----~~~lv 749 (973)
...+..+.||+|.||.||||+.. ++.||||++ .....+.|.+|.++.+. ++|+||++++++.+.++ ++++|
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~--~~~VAVKif-p~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV 286 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD--NRLVAVKIF-PEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV 286 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc--CceeEEEec-CHHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence 34466788999999999999998 589999976 45567788999888765 58999999999887665 78999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhc------CCCCeEecCCCCCCeeecCCCceEEecc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHD------CSPPIIHRDIKSSNILLDEDYEPKIADF 823 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~------~~~~ivH~Dlkp~Nill~~~~~~kl~Df 823 (973)
+||.+.|+|.+||..+ .++|....+|+..+++||+|||++ .+++|+|||||.+||||..|+++.|+||
T Consensus 287 t~fh~kGsL~dyL~~n------tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDF 360 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLKAN------TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADF 360 (534)
T ss_pred eeeccCCcHHHHHHhc------cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecc
Confidence 9999999999999976 689999999999999999999975 3568999999999999999999999999
Q ss_pred cCCccccCCCCcccccccCcccccccccccccCC-CC-----ccchHHHHHHHHHHHHhCCC------------CCCccc
Q 002063 824 GVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCK-VS-----EKSDVFSFGVVLLELVTGRK------------PVEEEY 885 (973)
Q Consensus 824 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-----~~~DvwslG~~l~ell~g~~------------pf~~~~ 885 (973)
|+|..+.+.....+....+||.+|||||++.+.. +. .+.||||+|.|+|||+++-. ||+..-
T Consensus 361 GLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ev 440 (534)
T KOG3653|consen 361 GLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEV 440 (534)
T ss_pred ceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHh
Confidence 9999998777777777789999999999987653 22 36899999999999999533 333333
Q ss_pred CCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCCCC-CCCCC
Q 002063 886 GDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCTDK-SPDNS 964 (973)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~-~~~~~ 964 (973)
+....+.++....+.+.. ...+.+.-. ....+..+.+.+..||+.||+.|.|+.=|.+.+.++....+. ..+.+
T Consensus 441 G~hPt~e~mq~~VV~kK~-RP~~p~~W~----~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~~~~~s~ 515 (534)
T KOG3653|consen 441 GNHPTLEEMQELVVRKKQ-RPKIPDAWR----KHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWEDSSGESS 515 (534)
T ss_pred cCCCCHHHHHHHHHhhcc-CCCChhhhh----cCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCccCCccc
Confidence 334445555444433322 111111111 113455688899999999999999999999999888765543 33443
Q ss_pred C
Q 002063 965 S 965 (973)
Q Consensus 965 s 965 (973)
+
T Consensus 516 ~ 516 (534)
T KOG3653|consen 516 S 516 (534)
T ss_pred c
Confidence 3
No 20
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=7.9e-41 Score=325.92 Aligned_cols=263 Identities=24% Similarity=0.318 Sum_probs=206.5
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc----cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
.+|...+++|+|.||.||+|++.++|+.||||+++..+ -.....||++.++.++||||+.++++|...+..-+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 46888899999999999999999999999999997632 23456899999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
||+ .+|+..++.. ...+...++..++.++++|++||| ++.|+||||||.|+|++++|.+||+|||+|+.+..
T Consensus 82 fm~-tdLe~vIkd~----~i~l~pa~iK~y~~m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~ 153 (318)
T KOG0659|consen 82 FMP-TDLEVVIKDK----NIILSPADIKSYMLMTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGS 153 (318)
T ss_pred ecc-ccHHHHhccc----ccccCHHHHHHHHHHHHHHHHHHH---hhhhhcccCCccceEEcCCCcEEeecccchhccCC
Confidence 995 5999888753 456788899999999999999999 88999999999999999999999999999998876
Q ss_pred CCCcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHH---hhccc-----
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVST---HLNNH----- 902 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~---~~~~~----- 902 (973)
......+ .+-|..|+|||.++|. .|+..+||||.||++.||+-|.+-|.+.. +-+++...+.. ...+.
T Consensus 154 p~~~~~~--~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~s-DidQL~~If~~LGTP~~~~WP~~~ 230 (318)
T KOG0659|consen 154 PNRIQTH--QVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDS-DIDQLSKIFRALGTPTPDQWPEMT 230 (318)
T ss_pred CCccccc--ceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCc-hHHHHHHHHHHcCCCCcccCcccc
Confidence 6554433 3679999999998865 59999999999999999999877665431 11111111111 00000
Q ss_pred --ccchhh--ccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 903 --ENVLKV--LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 903 --~~~~~~--~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
+.+.++ .................++++.+|+..+|.+|++++|+++|
T Consensus 231 ~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 231 SLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred ccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 000000 00111111233445667899999999999999999999876
No 21
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-40 Score=352.21 Aligned_cols=265 Identities=26% Similarity=0.338 Sum_probs=209.8
Q ss_pred HHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeC--Ce
Q 002063 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKG--GS 745 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~ 745 (973)
....+.|+.+++||+|.||.||+|++..+|+.||+|++..+ .......||+.+|++++||||+++.+...+. ..
T Consensus 113 ~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~s 192 (560)
T KOG0600|consen 113 PRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGS 192 (560)
T ss_pred ccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCce
Confidence 34455788889999999999999999999999999998753 3344457999999999999999999988776 68
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccC
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
.|||+|||++ +|.-++.. ....++..++..++.|+++||+|+| .++|+|||||.+||||+.+|.+||+|||+
T Consensus 193 iYlVFeYMdh-DL~GLl~~----p~vkft~~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKiaDFGL 264 (560)
T KOG0600|consen 193 IYLVFEYMDH-DLSGLLSS----PGVKFTEPQIKCYMKQLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIADFGL 264 (560)
T ss_pred EEEEEecccc-hhhhhhcC----CCcccChHHHHHHHHHHHHHHHHHh---hcCeeeccccccceEEcCCCCEEeccccc
Confidence 9999999987 77777653 4567899999999999999999999 89999999999999999999999999999
Q ss_pred CccccCCCCcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCC-----------CccHHH
Q 002063 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGD-----------GKDIVY 893 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~-----------~~~~~~ 893 (973)
|+++..... ..++..+-|..|+|||.+.|. .|+.++|+||.|||+.||++|+..|.+...- .....+
T Consensus 265 Ar~y~~~~~-~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~ 343 (560)
T KOG0600|consen 265 ARFYTPSGS-APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDY 343 (560)
T ss_pred eeeccCCCC-cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhc
Confidence 998765433 336667889999999998765 6999999999999999999999999765211 112222
Q ss_pred HHHHhhcccccchhhccc-----cccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 894 WVSTHLNNHENVLKVLDC-----EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
|....+... ..+.+ ....+.........++++..+|..||++|.|+.++++.
T Consensus 344 W~~~kLP~~----~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 344 WPVSKLPHA----TIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred cccccCCcc----cccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 321111110 11111 11112233344567889999999999999999999864
No 22
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.4e-40 Score=353.68 Aligned_cols=248 Identities=27% Similarity=0.385 Sum_probs=214.3
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec----cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
++|.+.+.||+|+||+||||+.+.+.+.||+|.+.+ +++.+.+.+|++++++++||||+.++++|+...+.++|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 578888999999999999999999999999999876 3455668899999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|+.| +|+.++.. +..++++.+..++.++..||.||| +.+|+|||+||+||+++..|.+|+||||+|+-+..
T Consensus 82 ~a~g-~L~~il~~-----d~~lpEe~v~~~a~~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~ 152 (808)
T KOG0597|consen 82 YAVG-DLFTILEQ-----DGKLPEEQVRAIAYDLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMST 152 (808)
T ss_pred hhhh-hHHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHH---hcCcccccCCcceeeecCCCceeechhhhhhhccc
Confidence 9976 99999975 456899999999999999999999 89999999999999999999999999999987654
Q ss_pred CCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccc
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDC 911 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
. ..-.+...||+-|||||+..+..|+..+|+||+||++||+++|++||... ++.+.++........
T Consensus 153 ~--t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~-----si~~Lv~~I~~d~v~------- 218 (808)
T KOG0597|consen 153 N--TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR-----SITQLVKSILKDPVK------- 218 (808)
T ss_pred C--ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-----HHHHHHHHHhcCCCC-------
Confidence 3 23344578999999999999999999999999999999999999999543 444454444433321
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 912 EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 912 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.+......+..++...+.+||.+|.+..+++.|--
T Consensus 219 -----~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF 253 (808)
T KOG0597|consen 219 -----PPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHPF 253 (808)
T ss_pred -----CcccccHHHHHHHHHHhhcChhhcccHHHHhcChH
Confidence 12255667889999999999999999999988754
No 23
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-41 Score=362.36 Aligned_cols=399 Identities=21% Similarity=0.246 Sum_probs=271.7
Q ss_pred cEEEecCCcccCCCC-CcCCC--CCCCEEeccCcccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEc
Q 002063 124 KVLNVTGNAMVGSVP-DLSAL--KNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFL 200 (973)
Q Consensus 124 ~~L~L~~n~l~~~~~-~l~~l--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L 200 (973)
+.||.+++.+..... .+.++ +.-++||+|+|.++.+.+..|.++++|+++++.+|.++ .||...+...+|+.|+|
T Consensus 55 ~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt--~IP~f~~~sghl~~L~L 132 (873)
T KOG4194|consen 55 RLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT--RIPRFGHESGHLEKLDL 132 (873)
T ss_pred eeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh--hcccccccccceeEEee
Confidence 456778877755322 12222 23456888888888777777777777777777777765 45555555556777777
Q ss_pred ccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEeeccccccc
Q 002063 201 AHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGK 280 (973)
Q Consensus 201 ~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 280 (973)
.+|.|+..-.+++..++.|+.||||.|.|+..--..|..-.++++|+|+.|.|+..--..|.++.+|..|.|+.|+++..
T Consensus 133 ~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittL 212 (873)
T KOG4194|consen 133 RHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTL 212 (873)
T ss_pred eccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCccccc
Confidence 77777666666666666666666666666633333444445555555555555544445555555555555555555533
Q ss_pred cCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCccccccccccccccccccccccCChhhhhh
Q 002063 281 LPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEK 360 (973)
Q Consensus 281 ~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 360 (973)
.+..|.+|++|+.|+|..|+|.-..-.+ |.++++|+.|.|..|.+..
T Consensus 213 p~r~Fk~L~~L~~LdLnrN~irive~lt------------------------FqgL~Sl~nlklqrN~I~k--------- 259 (873)
T KOG4194|consen 213 PQRSFKRLPKLESLDLNRNRIRIVEGLT------------------------FQGLPSLQNLKLQRNDISK--------- 259 (873)
T ss_pred CHHHhhhcchhhhhhccccceeeehhhh------------------------hcCchhhhhhhhhhcCccc---------
Confidence 3334444555555555555554322333 4444555555555554441
Q ss_pred hhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEc
Q 002063 361 RKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVL 440 (973)
Q Consensus 361 ~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L 440 (973)
.-...|-.+.++++|+|+.|++...-..++++++.|+.|+||+|.|..+........++|++|+|
T Consensus 260 ---------------L~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdL 324 (873)
T KOG4194|consen 260 ---------------LDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDL 324 (873)
T ss_pred ---------------ccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEec
Confidence 11234556666777777777777666677777777777777777777777777777788888888
Q ss_pred ccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCc---cccCccccchhhcccccc
Q 002063 441 QNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPN---EMGDCARIVDLNLARNSL 517 (973)
Q Consensus 441 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~---~~~~l~~L~~L~Ls~N~l 517 (973)
++|+|+...+..|..+..|++|+|++|++...--.+|..+++|++|||++|.|...+.+ .|.+|++|+.|+|.+|+|
T Consensus 325 s~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNql 404 (873)
T KOG4194|consen 325 SSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQL 404 (873)
T ss_pred cccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCcee
Confidence 88888877777888888888888888888866667888888888888888888765554 367788888888888888
Q ss_pred ccCCCccccccCCCCeeecCCCccCCCCCchhhcccCceEEccCCccccccCccc
Q 002063 518 SGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLKLSSIDLSENQLSGSVPLDF 572 (973)
Q Consensus 518 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~L~~l~ls~N~l~~~~p~~~ 572 (973)
..+....|.++..|+.|||.+|.|....|..|..+.|+.|-++.-.+-|+|...|
T Consensus 405 k~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m~Lk~Lv~nSssflCDCql~W 459 (873)
T KOG4194|consen 405 KSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPMELKELVMNSSSFLCDCQLKW 459 (873)
T ss_pred eecchhhhccCcccceecCCCCcceeecccccccchhhhhhhcccceEEeccHHH
Confidence 8666678888899999999999888888888888888888888888888888764
No 24
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-40 Score=325.60 Aligned_cols=238 Identities=26% Similarity=0.355 Sum_probs=200.2
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc-----cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeE
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
....+|+..+.||.|+||+|.+++.+.+|..+|+|++.+++ ..+...+|..+++.+.||+++++++.+.+.+..|
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ly 120 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLY 120 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEE
Confidence 34568899999999999999999999999999999998753 3455778999999999999999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
|||||++||.|+.++++. ..++....+-+|.||+.|++||| +.+|++||+||+|||+|++|.+||+|||.|+
T Consensus 121 mvmeyv~GGElFS~Lrk~-----~rF~e~~arFYAAeivlAleylH---~~~iiYRDLKPENiLlD~~G~iKitDFGFAK 192 (355)
T KOG0616|consen 121 MVMEYVPGGELFSYLRKS-----GRFSEPHARFYAAEIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKITDFGFAK 192 (355)
T ss_pred EEEeccCCccHHHHHHhc-----CCCCchhHHHHHHHHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEEEeccceE
Confidence 999999999999999864 35788888899999999999999 8899999999999999999999999999998
Q ss_pred cccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 828 IAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
.+... ....+||+.|+|||+++++.|..++|.|||||++|||+.|..||..... ... +.+
T Consensus 193 ~v~~r-----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~-----~~i----------Y~K 252 (355)
T KOG0616|consen 193 RVSGR-----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP-----IQI----------YEK 252 (355)
T ss_pred EecCc-----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh-----HHH----------HHH
Confidence 77533 3346899999999999999999999999999999999999999976421 111 122
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCC
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLR 940 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 940 (973)
++...+ ..+.-....+.+++.+.++.|-.+|
T Consensus 253 I~~~~v--~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 253 ILEGKV--KFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred HHhCcc--cCCcccCHHHHHHHHHHHhhhhHhh
Confidence 222222 1222334456677777888888887
No 25
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-40 Score=356.89 Aligned_cols=260 Identities=29% Similarity=0.413 Sum_probs=207.9
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec----cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
..+.+.+...||+|.||+||+|++-. .||||++.. ++..+.|++|+.++++-+|.||+-+.||+..+.. .||
T Consensus 390 p~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIi 465 (678)
T KOG0193|consen 390 PPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AII 465 (678)
T ss_pred CHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eee
Confidence 34455788999999999999999974 799999875 3466789999999999999999999999998877 999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
+.||+|.+|+.+++.. +.+++..+...||.|||+||.||| .++|||||+|..|||+.+++.|||+|||++..-
T Consensus 466 TqwCeGsSLY~hlHv~----etkfdm~~~idIAqQiaqGM~YLH---AK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 466 TQWCEGSSLYTHLHVQ----ETKFDMNTTIDIAQQIAQGMDYLH---AKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVK 538 (678)
T ss_pred ehhccCchhhhhccch----hhhhhHHHHHHHHHHHHHhhhhhh---hhhhhhhhccccceEEccCCcEEEecccceeee
Confidence 9999999999999864 356888899999999999999999 889999999999999999999999999998643
Q ss_pred cCCCCcccccccCcccccccccccccC---CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYTC---KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
..-..........|...|||||+++.. +|++++||||||+|+|||++|..||... ....+..++......
T Consensus 539 ~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~--~~dqIifmVGrG~l~----- 611 (678)
T KOG0193|consen 539 TRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQ--NRDQIIFMVGRGYLM----- 611 (678)
T ss_pred eeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCC--ChhheEEEecccccC-----
Confidence 221112222234578899999998643 6899999999999999999999999732 111111111110000
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCC
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPC 956 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 956 (973)
.| .......+.+++.+|+..||..++++||.+.+|+..|+++.+.
T Consensus 612 --pd---~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 612 --PD---LSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred --cc---chhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 00 0112335566888999999999999999999999999988774
No 26
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-41 Score=368.31 Aligned_cols=257 Identities=27% Similarity=0.453 Sum_probs=218.6
Q ss_pred CCcccCeecccCcEEEEEEEEcCCC---ceEEEEEeec---cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNA---GTVAVKQLWK---GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~---~~vavK~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
...+.++||.|.||+|++|+.+..+ ..||||.++. ++...+|..|+.||.+++||||+++.++......++||+
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiT 709 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIIT 709 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEh
Confidence 4467899999999999999998655 4699999987 455677999999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
|||++|+|+.+|+.+ +.++.+.+...|..+||.||+||. +.++|||||.++||||+.+-.+|++|||+++..+
T Consensus 710 EyMENGsLDsFLR~~----DGqftviQLVgMLrGIAsGMkYLs---dm~YVHRDLAARNILVNsnLvCKVsDFGLSRvle 782 (996)
T KOG0196|consen 710 EYMENGSLDSFLRQN----DGQFTVIQLVGMLRGIASGMKYLS---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 782 (996)
T ss_pred hhhhCCcHHHHHhhc----CCceEeehHHHHHHHHHHHhHHHh---hcCchhhhhhhhheeeccceEEEeccccceeecc
Confidence 999999999999875 466999999999999999999999 8899999999999999999999999999999775
Q ss_pred CCCCcccccccCc--ccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 831 NSPKVSDYSCFAG--THGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 831 ~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
++. ...++...| +.+|.|||++..++++.++||||+|++|||.++ |.+||.+. ..++.. +
T Consensus 783 dd~-~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdm--SNQdVI--------------k 845 (996)
T KOG0196|consen 783 DDP-EAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM--SNQDVI--------------K 845 (996)
T ss_pred cCC-CccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCccccc--chHHHH--------------H
Confidence 544 333443334 469999999999999999999999999999988 99999765 222222 2
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCC
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCT 957 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 957 (973)
-++..+.-..+.+++..|.+|+..||++|-.+||.+.+|+.+|.++.+.+
T Consensus 846 aIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP 895 (996)
T KOG0196|consen 846 AIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNP 895 (996)
T ss_pred HHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCc
Confidence 22233333445677888999999999999999999999999999986544
No 27
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-40 Score=347.22 Aligned_cols=260 Identities=28% Similarity=0.383 Sum_probs=207.2
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc--cHHHHHHHHHHHHhcCCCceeeEeEEEEeCC--eeEEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD--GVKVFAAEMEILGKIRHRNILKLYACLLKGG--SSFLVLE 751 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--~~~lv~e 751 (973)
.+|...+.||+|+||+||++...++|...|||...... ..+.+.+|++++++++|||||+.++...... .+++.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 45778899999999999999999989999999876541 1556899999999999999999999855444 6899999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC-CCceEEecccCCcccc
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE-DYEPKIADFGVAKIAE 830 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~Dfgl~~~~~ 830 (973)
|+++|+|.+++.+. +. .++...+..++.||++||+||| ++++|||||||+|||++. ++.+||+|||.+....
T Consensus 97 y~~~GsL~~~~~~~---g~-~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~ 169 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRY---GG-KLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLE 169 (313)
T ss_pred ccCCCcHHHHHHHc---CC-CCCHHHHHHHHHHHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEeccCccccccc
Confidence 99999999999875 22 6899999999999999999999 899999999999999999 7999999999998765
Q ss_pred C-CCCcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhh
Q 002063 831 N-SPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 831 ~-~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
. ...........||+.|||||++..+ ....++||||+||++.||+||+.||... .....++-......
T Consensus 170 ~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~----~~~~~~~~~ig~~~------ 239 (313)
T KOG0198|consen 170 SKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF----FEEAEALLLIGRED------ 239 (313)
T ss_pred cccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh----cchHHHHHHHhccC------
Confidence 4 1112223347899999999999853 3345999999999999999999999763 01111111111111
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCC
Q 002063 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPC 956 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 956 (973)
..+..+.....+..+++.+|+..+|++|||+.++++|.......
T Consensus 240 ----~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 240 ----SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNS 283 (313)
T ss_pred ----CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence 11122333455678899999999999999999999998765543
No 28
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-39 Score=355.01 Aligned_cols=251 Identities=27% Similarity=0.382 Sum_probs=208.2
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-------ccHHHHHHHHHHHHhcC-CCceeeEeEEEEeCC
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-------DGVKVFAAEMEILGKIR-HRNILKLYACLLKGG 744 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-------~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~ 744 (973)
...+.|.+.+.||+|+||+|+.|++..+++.||||++.+. ...+.+.+|+.++++++ ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 4567899999999999999999999999999999976653 23456678999999998 999999999999999
Q ss_pred eeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCC-CceEEecc
Q 002063 745 SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED-YEPKIADF 823 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~Df 823 (973)
..|+||||+.+|+|++++... ..+.+.....++.|+++|++|+| +++|+||||||+||+++.+ +.+||+||
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~-----g~l~E~~ar~~F~Qlisav~y~H---~~gi~HRDLK~ENilld~~~~~~Kl~DF 165 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNK-----GRLKEDEARKYFRQLISAVAYCH---SRGIVHRDLKPENILLDGNEGNLKLSDF 165 (370)
T ss_pred eEEEEEEecCCccHHHHHHHc-----CCCChHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEecCCCCCEEEecc
Confidence 999999999999999999863 35677889999999999999999 8899999999999999999 99999999
Q ss_pred cCCccccCCCCcccccccCcccccccccccccCC-CC-ccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcc
Q 002063 824 GVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCK-VS-EKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNN 901 (973)
Q Consensus 824 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 901 (973)
|++.... .........+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||++. +...........
T Consensus 166 G~s~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~-----~~~~l~~ki~~~ 238 (370)
T KOG0583|consen 166 GLSAISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDS-----NVPNLYRKIRKG 238 (370)
T ss_pred ccccccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCc-----cHHHHHHHHhcC
Confidence 9998774 1222344578999999999999887 86 7899999999999999999999863 222222222111
Q ss_pred cccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 902 HENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.-.+...+ . ...+..++.+|+..+|.+|+++.+++++
T Consensus 239 ~~~~p~~~----------~-S~~~~~Li~~mL~~~P~~R~t~~~i~~h 275 (370)
T KOG0583|consen 239 EFKIPSYL----------L-SPEARSLIEKMLVPDPSTRITLLEILEH 275 (370)
T ss_pred CccCCCCc----------C-CHHHHHHHHHHcCCCcccCCCHHHHhhC
Confidence 11111111 0 5668899999999999999999999944
No 29
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=341.69 Aligned_cols=262 Identities=29% Similarity=0.344 Sum_probs=210.5
Q ss_pred CHHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc----------------cHHHHHHHHHHHHhcCCCcee
Q 002063 671 DAEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----------------GVKVFAAEMEILGKIRHRNIL 734 (973)
Q Consensus 671 ~~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~----------------~~~~~~~E~~~l~~l~hpniv 734 (973)
+.+.++.|++.+.||+|.||.|-+|++..+++.||||++.+.. ..+...+|+.++++++|||||
T Consensus 92 ~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV 171 (576)
T KOG0585|consen 92 DRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVV 171 (576)
T ss_pred cceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCee
Confidence 3567889999999999999999999999999999999986521 124678999999999999999
Q ss_pred eEeEEEEe--CCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeee
Q 002063 735 KLYACLLK--GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL 812 (973)
Q Consensus 735 ~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill 812 (973)
+++++..+ .+..|||+|||..|.+.+. ....+.+...+.+.++.++..||+||| .++||||||||+|+|+
T Consensus 172 ~LiEvLDDP~s~~~YlVley~s~G~v~w~-----p~d~~els~~~Ar~ylrDvv~GLEYLH---~QgiiHRDIKPsNLLl 243 (576)
T KOG0585|consen 172 KLIEVLDDPESDKLYLVLEYCSKGEVKWC-----PPDKPELSEQQARKYLRDVVLGLEYLH---YQGIIHRDIKPSNLLL 243 (576)
T ss_pred EEEEeecCcccCceEEEEEeccCCccccC-----CCCcccccHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEE
Confidence 99999876 4678999999999876432 222334889999999999999999999 7899999999999999
Q ss_pred cCCCceEEecccCCccccCCCC---cccccccCcccccccccccccCC----CCccchHHHHHHHHHHHHhCCCCCCccc
Q 002063 813 DEDYEPKIADFGVAKIAENSPK---VSDYSCFAGTHGYIAPELAYTCK----VSEKSDVFSFGVVLLELVTGRKPVEEEY 885 (973)
Q Consensus 813 ~~~~~~kl~Dfgl~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwslG~~l~ell~g~~pf~~~~ 885 (973)
+++|++||+|||.+........ .......+||+.|+|||...++. .+.+.||||+||+||.|+.|+.||-+..
T Consensus 244 ~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~ 323 (576)
T KOG0585|consen 244 SSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF 323 (576)
T ss_pred cCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch
Confidence 9999999999999986632211 11223468999999999987632 3467899999999999999999997642
Q ss_pred CCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 886 GDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
. ... ..+++...+.....++..+.+.+++.+++.+||++|.+..+|..|..-...
T Consensus 324 ~-----~~l----------~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 324 E-----LEL----------FDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred H-----HHH----------HHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 1 001 122333333333334556778899999999999999999999999987766
No 30
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=3e-41 Score=359.89 Aligned_cols=385 Identities=21% Similarity=0.219 Sum_probs=288.8
Q ss_pred cEEeCCCCcccCccCccccCC--CCCcEEEecCCcccCCCC-CcCCCCCCCEEeccCcccCCccccccccccccceEEcc
Q 002063 100 TVLSLPFNVLSGKLPLELSNC--SNLKVLNVTGNAMVGSVP-DLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIG 176 (973)
Q Consensus 100 ~~L~Ls~n~l~~~~p~~l~~l--~~L~~L~L~~n~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~ 176 (973)
+.||.+.+.+...--..+... +.-+.||+++|+++.... .|.++++|+++++..|.++ .+|.......+|+.|+|.
T Consensus 55 ~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~ 133 (873)
T KOG4194|consen 55 RLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLR 133 (873)
T ss_pred eeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeee
Confidence 457888887764322222222 234679999999988766 4899999999999999999 788888888899999999
Q ss_pred CCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCC
Q 002063 177 DNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGE 256 (973)
Q Consensus 177 ~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 256 (973)
+|.|+... .+++.-++.|+.||||.|.|+...-.+|..=.++++|+|++|+|+......|..+.+|..|.|++|+++..
T Consensus 134 ~N~I~sv~-se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittL 212 (873)
T KOG4194|consen 134 HNLISSVT-SEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTL 212 (873)
T ss_pred cccccccc-HHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCccccc
Confidence 99997654 46788899999999999999966666787778999999999999988889999999999999999999977
Q ss_pred CCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCcccccc
Q 002063 257 LPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRY 336 (973)
Q Consensus 257 ~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l 336 (973)
.+..|.++++|+.|+|..|+|.-.---.|..|++|+.|.|..|.|...-...|..|.++++|+|..|+++..-..++-++
T Consensus 213 p~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgL 292 (873)
T KOG4194|consen 213 PQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGL 292 (873)
T ss_pred CHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhccccccc
Confidence 77788999999999999999973335668899999999999999997777789999999999999999887777777788
Q ss_pred ccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccCCCCcceEec
Q 002063 337 TALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDF 416 (973)
Q Consensus 337 ~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 416 (973)
+.|+.|+||+|.|.. .-+++...+++|++|+|++|+|+...+..|..+..|+.|+|
T Consensus 293 t~L~~L~lS~NaI~r------------------------ih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnL 348 (873)
T KOG4194|consen 293 TSLEQLDLSYNAIQR------------------------IHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNL 348 (873)
T ss_pred chhhhhccchhhhhe------------------------eecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcc
Confidence 888888888887762 22345556677777777777777777777777777777777
Q ss_pred cCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCCh---hhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCccc
Q 002063 417 GDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPS---ELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENAL 493 (973)
Q Consensus 417 ~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~---~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 493 (973)
++|++..+....|..+++|+.|||++|.|+..+.+ .|.++++|+.|.|.+|++..+.-.+|.++..|+.|||.+|.|
T Consensus 349 s~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~Nai 428 (873)
T KOG4194|consen 349 SHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAI 428 (873)
T ss_pred cccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcc
Confidence 77766665555666666666666666666543332 344455555555555555533334455555555555555555
Q ss_pred ccCCCccccCccccchhh
Q 002063 494 TGSIPNEMGDCARIVDLN 511 (973)
Q Consensus 494 ~~~~p~~~~~l~~L~~L~ 511 (973)
..+-|++|..+ .|++|-
T Consensus 429 aSIq~nAFe~m-~Lk~Lv 445 (873)
T KOG4194|consen 429 ASIQPNAFEPM-ELKELV 445 (873)
T ss_pred eeecccccccc-hhhhhh
Confidence 44444444444 444443
No 31
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=7.7e-39 Score=342.06 Aligned_cols=252 Identities=26% Similarity=0.339 Sum_probs=204.7
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
.+++|+.++.||+|+||+||+|+-+.+|..+|+|++++. ..++.+..|-.+|...++|+||+++..|++.+..|+
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 567899999999999999999999999999999999873 456778899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||++||++..+|.+. ..++......++.+++-|++.+| +.|+|||||||+|+|||..|++||+|||++.-
T Consensus 219 iMEylPGGD~mTLL~~~-----~~L~e~~arfYiaE~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~g 290 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRK-----DTLTEDWARFYIAETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTG 290 (550)
T ss_pred EEEecCCccHHHHHHhc-----CcCchHHHHHHHHHHHHHHHHHH---HcCcccccCChhheeecCCCCEeeccccccch
Confidence 99999999999999753 45778888889999999999999 89999999999999999999999999999853
Q ss_pred ccC----------------------CCCcc----ccc-------------------ccCcccccccccccccCCCCccch
Q 002063 829 AEN----------------------SPKVS----DYS-------------------CFAGTHGYIAPELAYTCKVSEKSD 863 (973)
Q Consensus 829 ~~~----------------------~~~~~----~~~-------------------~~~gt~~y~aPE~~~~~~~~~~~D 863 (973)
... .+... ... ..+|||.|+|||++.+..|+..+|
T Consensus 291 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cD 370 (550)
T KOG0605|consen 291 LDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECD 370 (550)
T ss_pred hhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCcccc
Confidence 211 00000 000 246999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcccCC--CccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCC
Q 002063 864 VFSFGVVLLELVTGRKPVEEEYGD--GKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRP 941 (973)
Q Consensus 864 vwslG~~l~ell~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp 941 (973)
+||||||+|||+.|.+||..+... .+.+..|........+ .....+..++|.+|+. ||++|.
T Consensus 371 wWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~---------------~~~s~eA~DLI~rll~-d~~~RL 434 (550)
T KOG0605|consen 371 WWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEE---------------VDLSDEAKDLITRLLC-DPENRL 434 (550)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCc---------------CcccHHHHHHHHHHhc-CHHHhc
Confidence 999999999999999999765211 2233333222211111 1122567788999998 999997
Q ss_pred C---HHHHHHH
Q 002063 942 P---MREVVKM 949 (973)
Q Consensus 942 t---~~evl~~ 949 (973)
- +.||-+|
T Consensus 435 G~~G~~EIK~H 445 (550)
T KOG0605|consen 435 GSKGAEEIKKH 445 (550)
T ss_pred CcccHHHHhcC
Confidence 5 6666655
No 32
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.2e-40 Score=335.33 Aligned_cols=263 Identities=27% Similarity=0.376 Sum_probs=203.3
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEEEEeCC-----eeEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKGG-----SSFLVL 750 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-----~~~lv~ 750 (973)
-.|+..+++|+|+||.||+|+..++++.||||+.+.+...+ .+|+++|++++|||||++..+|.... ...+||
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k--nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVl 101 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK--NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVL 101 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC--cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHH
Confidence 35777899999999999999999999999999998866554 68999999999999999999886532 235899
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCC-CceEEecccCCccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED-YEPKIADFGVAKIA 829 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~Dfgl~~~~ 829 (973)
|||+. +|+++++.. ...+..++...+.-+..|+++||+||| +.+|+||||||.|+|+|.+ |.+||||||.|+..
T Consensus 102 eymP~-tL~~~~r~~-~~~~~~mp~~~iKLYt~Qlfrgl~yLh---~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 102 EYMPE-TLYRVIRHY-TRANQRMPLLEIKLYTYQLFRGLAYLH---SHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HhchH-HHHHHHHHH-hhcCCCCceeeeHHHHHHHHHHHHHHH---hcCcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 99965 999999864 233456788888899999999999999 7899999999999999976 89999999999988
Q ss_pred cCCCCcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHH--------hhc
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVST--------HLN 900 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~--------~~~ 900 (973)
..+..... ...|..|+|||.+.|. .|+.+.||||.|||+.||+-|+.-|.+..+ ..+++..++- ...
T Consensus 177 ~~~epniS---YicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~-~dQL~eIik~lG~Pt~e~I~~ 252 (364)
T KOG0658|consen 177 VKGEPNIS---YICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSS-VDQLVEIIKVLGTPTREDIKS 252 (364)
T ss_pred ccCCCcee---EEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCH-HHHHHHHHHHhCCCCHHHHhh
Confidence 76655433 3458899999998876 599999999999999999999999976422 1112211110 000
Q ss_pred ccccchhhccccccCh-----hhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 901 NHENVLKVLDCEVASE-----SIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 901 ~~~~~~~~~~~~~~~~-----~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
....+.+...+.+... .......+..+++.++++++|.+|.++.|+++|
T Consensus 253 mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 253 MNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred cCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 1111111111221111 233445678899999999999999999999865
No 33
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-39 Score=350.30 Aligned_cols=249 Identities=25% Similarity=0.364 Sum_probs=210.8
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec--cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK--GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
..|+.-.+||+|+.|.||.|+...+++.||||++.. ....+-+.+|+.+|+..+|+|||++++.|..+++.|+|||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 457777899999999999999999999999999865 334455789999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
+||+|.+.+... .+++.++..|..++++||+||| .++|+|||||.+|||++.+|.+||+|||++..+....
T Consensus 353 ~ggsLTDvVt~~------~~~E~qIA~Icre~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~ 423 (550)
T KOG0578|consen 353 EGGSLTDVVTKT------RMTEGQIAAICREILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ 423 (550)
T ss_pred CCCchhhhhhcc------cccHHHHHHHHHHHHHHHHHHH---hcceeeeccccceeEeccCCcEEEeeeeeeecccccc
Confidence 999999999754 4789999999999999999999 8999999999999999999999999999998776543
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcc-cc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD-CE 912 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 912 (973)
. ....-+||+.|||||+...+.|++++||||||++++||+-|+.||-.+ ..+... .-+.+ ..
T Consensus 424 ~--KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE----~PlrAl-----------yLIa~ng~ 486 (550)
T KOG0578|consen 424 S--KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNE----NPLRAL-----------YLIATNGT 486 (550)
T ss_pred C--ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCC----ChHHHH-----------HHHhhcCC
Confidence 3 344568999999999999999999999999999999999999999642 111111 11111 11
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
..-.........+.+|+.+||..||++||++.|+++|-
T Consensus 487 P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~Hp 524 (550)
T KOG0578|consen 487 PKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHP 524 (550)
T ss_pred CCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcCh
Confidence 12233445567899999999999999999999999874
No 34
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-39 Score=312.44 Aligned_cols=252 Identities=28% Similarity=0.360 Sum_probs=210.8
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
.+++|++.+.||+|.||.||+|+.++++-.||+|++.+. ....++.+|+++...++||||++++++|.+....|+
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL 99 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL 99 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence 456889999999999999999999999999999998773 345678999999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
++||.++|+++..++.. ....++......++.|+|.|+.|+| .++|+||||||+|+|++.++.+|++|||.+..
T Consensus 100 ilEya~~gel~k~L~~~---~~~~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~ 173 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEG---RMKRFDEQRAATYIKQLANALLYCH---LKRVIHRDIKPENLLLGSAGELKIADFGWSVH 173 (281)
T ss_pred EEEecCCchHHHHHHhc---ccccccccchhHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCCCCCeeccCCCceee
Confidence 99999999999999853 3345677778889999999999999 88999999999999999999999999999875
Q ss_pred ccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhh
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
... ......+||..|.+||...+..++..+|+|++|++.||++.|..||+.... +.. .+..... ++
T Consensus 174 ~p~----~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~-~et----YkrI~k~-----~~ 239 (281)
T KOG0580|consen 174 APS----NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH-SET----YKRIRKV-----DL 239 (281)
T ss_pred cCC----CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh-HHH----HHHHHHc-----cc
Confidence 532 234456899999999999999999999999999999999999999976421 111 1111111 11
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
.++ ........+++.+|+.++|.+|.+..|+++|-.-
T Consensus 240 ~~p-------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI 276 (281)
T KOG0580|consen 240 KFP-------STISGGAADLISRLLVKNPIERLALTEVMDHPWI 276 (281)
T ss_pred cCC-------cccChhHHHHHHHHhccCccccccHHHHhhhHHH
Confidence 112 2234457788999999999999999999988654
No 35
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=9.7e-39 Score=356.81 Aligned_cols=262 Identities=28% Similarity=0.401 Sum_probs=203.5
Q ss_pred hcCCcccCeecccCcEEEEEEEEc-----CCCceEEEEEeecc---ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeC-C
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLK-----KNAGTVAVKQLWKG---DGVKVFAAEMEILGKI-RHRNILKLYACLLKG-G 744 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~-----~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~-~ 744 (973)
.++|++.+.||+|+||.||+|.+. .+++.||||++... ...+.+.+|+++++++ +||||+++++++... .
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 357899999999999999999852 34568999998653 2345688999999999 899999999988764 4
Q ss_pred eeEEEEEccCCCchHHHHHhhhcC--------------------------------------------------------
Q 002063 745 SSFLVLEYMPNGNLFQALHKRVKE-------------------------------------------------------- 768 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~-------------------------------------------------------- 768 (973)
..++||||+++|+|.+++......
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 689999999999999999753110
Q ss_pred -CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcccccccCccccc
Q 002063 769 -GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGY 847 (973)
Q Consensus 769 -~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y 847 (973)
....+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++...............++..|
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y 242 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW 242 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence 0124778888999999999999999 789999999999999999999999999999865432222222233467889
Q ss_pred ccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHH
Q 002063 848 IAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLL 926 (973)
Q Consensus 848 ~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 926 (973)
+|||++.+..++.++|||||||++|||++ |..||...... .... ........ ...+......+.
T Consensus 243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~-~~~~----~~~~~~~~----------~~~~~~~~~~l~ 307 (338)
T cd05102 243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN-EEFC----QRLKDGTR----------MRAPENATPEIY 307 (338)
T ss_pred cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc-HHHH----HHHhcCCC----------CCCCCCCCHHHH
Confidence 99999999999999999999999999997 99999754211 1111 11111110 001112345688
Q ss_pred HHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 927 KIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 927 ~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
+++.+||+.||++||++.|+++.|+++.
T Consensus 308 ~li~~cl~~dp~~RPs~~el~~~l~~~~ 335 (338)
T cd05102 308 RIMLACWQGDPKERPTFSALVEILGDLL 335 (338)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 9999999999999999999999998764
No 36
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-39 Score=312.46 Aligned_cols=265 Identities=26% Similarity=0.369 Sum_probs=213.5
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec--cccHHHHHHHHHHHHhcCCCceeeEeEEEEeC-----CeeE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK--GDGVKVFAAEMEILGKIRHRNILKLYACLLKG-----GSSF 747 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~~~ 747 (973)
-++|++.+.+|+|||+.||+++.-.+++.||+|++.. .++.+...+|++..++++|||+++++++...+ .+.|
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 4589999999999999999999999999999998865 35667789999999999999999999887433 3589
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
++++|...|+|.+.+... +.....+++.+.++++.++++||++||.. ..+++||||||.||++++++.+++.|||.++
T Consensus 100 ll~Pyy~~Gsl~d~i~~~-k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERL-KIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEeehhccccHHHHHHHH-hhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCcc
Confidence 999999999999999876 44555789999999999999999999943 3459999999999999999999999999987
Q ss_pred cccCCCCcc-------cccccCcccccccccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHH
Q 002063 828 IAENSPKVS-------DYSCFAGTHGYIAPELAY---TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVST 897 (973)
Q Consensus 828 ~~~~~~~~~-------~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~ 897 (973)
...-..... +......|.-|+|||.+. +...++++|||||||++|+|+.|..||+..++.+.++..-+
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv-- 255 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAV-- 255 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEee--
Confidence 653211111 111234688999999874 55678999999999999999999999987655444432221
Q ss_pred hhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 898 HLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
..+..........++.+.+++.+|++.||.+||++.+++..+....
T Consensus 256 -----------~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 256 -----------QNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred -----------eccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 1111111122236778999999999999999999999999887653
No 37
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7e-39 Score=375.41 Aligned_cols=261 Identities=30% Similarity=0.408 Sum_probs=214.8
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCc-----eEEEEEeec---cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAG-----TVAVKQLWK---GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~-----~vavK~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
...+..+.||+|+||.||.|...+... .||||.+.+ .+...+|.+|..+|++++|||||+++|++.+....+
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~ 771 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL 771 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence 345778899999999999999875433 399998876 456778999999999999999999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhcCC--CCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccC
Q 002063 748 LVLEYMPNGNLFQALHKRVKEG--KPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~--~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
+++|||++|+|..||++..... ...+...+...++.|||+|++||+ ++++|||||.++|+|++....+||+|||+
T Consensus 772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe---~~~fvHRDLAaRNCLL~~~r~VKIaDFGl 848 (1025)
T KOG1095|consen 772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE---SKHFVHRDLAARNCLLDERRVVKIADFGL 848 (1025)
T ss_pred EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH---hCCCcCcchhhhheeecccCcEEEcccch
Confidence 9999999999999998642221 345788899999999999999999 88999999999999999999999999999
Q ss_pred CccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhccccc
Q 002063 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
|+.....+.........-+..|||||.+.++.++.|+|||||||++||++| |..||.... ..+....
T Consensus 849 ArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~--n~~v~~~---------- 916 (1025)
T KOG1095|consen 849 ARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRS--NFEVLLD---------- 916 (1025)
T ss_pred hHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcc--hHHHHHH----------
Confidence 996655554444333334569999999999999999999999999999999 999997541 1111111
Q ss_pred chhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
+.... +-+.+..++.++++++..||+.+|++||++.++++.+..+.+
T Consensus 917 ---~~~gg-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~ 963 (1025)
T KOG1095|consen 917 ---VLEGG-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISN 963 (1025)
T ss_pred ---HHhCC-ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhh
Confidence 11111 223455677789999999999999999999999998887654
No 38
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.9e-38 Score=318.36 Aligned_cols=267 Identities=25% Similarity=0.241 Sum_probs=204.9
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHH----HHHHHHHHHHhcCCCceeeEeEEEEe--CCee
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVK----VFAAEMEILGKIRHRNILKLYACLLK--GGSS 746 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~----~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~ 746 (973)
..+++|+..+.|++|+||.||+|+++.+++.||+|+++.+.+.. .-.||+.++.+.+|||||.+.++... -+.+
T Consensus 73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~i 152 (419)
T KOG0663|consen 73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKI 152 (419)
T ss_pred ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccccee
Confidence 45678999999999999999999999999999999997644322 34799999999999999999988754 4679
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
|||||||++ +|...+... ...+...++.-++.|+++|++||| .+.|+|||+|++|+|++..|.+||+|||+|
T Consensus 153 y~VMe~~Eh-DLksl~d~m----~q~F~~~evK~L~~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKiaDFGLA 224 (419)
T KOG0663|consen 153 YIVMEYVEH-DLKSLMETM----KQPFLPGEVKTLMLQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIADFGLA 224 (419)
T ss_pred eeeHHHHHh-hHHHHHHhc----cCCCchHHHHHHHHHHHHHHHHHh---hceeEecccchhheeeccCCcEEecccchh
Confidence 999999976 899999875 246788889999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHH-hhc--c-
Q 002063 827 KIAENSPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVST-HLN--N- 901 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~-~~~--~- 901 (973)
+.++... ..++..+-|..|+|||.+.+. .|++++||||+|||+.||++++..|.+...- .++...+.. ... .
T Consensus 225 R~ygsp~--k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~-dQl~~If~llGtPte~i 301 (419)
T KOG0663|consen 225 REYGSPL--KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEI-DQLDKIFKLLGTPSEAI 301 (419)
T ss_pred hhhcCCc--ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchH-HHHHHHHHHhCCCcccc
Confidence 9887653 344556779999999998765 5999999999999999999999998754211 111111110 000 0
Q ss_pred ---cccchhh--------ccccccChhhHH-HHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 902 ---HENVLKV--------LDCEVASESIKE-DMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 902 ---~~~~~~~--------~~~~~~~~~~~~-~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
......+ ....+...+... ..+.=++++...+.+||.+|.|+.|.++|=
T Consensus 302 wpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~ 362 (419)
T KOG0663|consen 302 WPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHE 362 (419)
T ss_pred CCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccc
Confidence 0000000 000111111111 224456788899999999999999998763
No 39
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-39 Score=338.10 Aligned_cols=247 Identities=31% Similarity=0.449 Sum_probs=207.9
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeec---cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK---GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.|+..+.||+|.||.||+|.+..+++.||+|++.- +.+.+++++|+.++..++++||.++++.+..+...+++||||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~ 93 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC 93 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence 56777899999999999999999999999999865 345677899999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
.||++.+.++.. ..+++....-+..++..|+.|+| ..+.+|||||+.||++..+|.+|++|||++.......
T Consensus 94 ~gGsv~~lL~~~-----~~~~E~~i~~ilre~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~ 165 (467)
T KOG0201|consen 94 GGGSVLDLLKSG-----NILDEFEIAVILREVLKGLDYLH---SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTV 165 (467)
T ss_pred cCcchhhhhccC-----CCCccceeeeehHHHHHHhhhhh---hcceecccccccceeEeccCcEEEEecceeeeeechh
Confidence 999999998743 22356666678899999999999 7899999999999999999999999999998775543
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
.. ...++||+.|||||++....|+.++||||||++.+||.+|..|+...+.- . +.-.+....
T Consensus 166 ~r--r~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPm---------------r-vlflIpk~~ 227 (467)
T KOG0201|consen 166 KR--RKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPM---------------R-VLFLIPKSA 227 (467)
T ss_pred hc--cccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcc---------------e-EEEeccCCC
Confidence 32 25689999999999999889999999999999999999999999765320 0 111111122
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.+.......+.+.+|+..|++++|+.||++.++++|
T Consensus 228 PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 228 PPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred CCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 222233667779999999999999999999999876
No 40
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-39 Score=342.51 Aligned_cols=244 Identities=31% Similarity=0.436 Sum_probs=203.6
Q ss_pred cccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCCch
Q 002063 679 EEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNGNL 758 (973)
Q Consensus 679 ~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL 758 (973)
...+-||.|+.|.||+|+.. ++.||||+++.-+ ..+++-|++++||||+.+.++|.....++||||||..|.|
T Consensus 127 sELeWlGSGaQGAVF~Grl~--netVAVKKV~elk-----ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL 199 (904)
T KOG4721|consen 127 SELEWLGSGAQGAVFLGRLH--NETVAVKKVRELK-----ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQL 199 (904)
T ss_pred hhhhhhccCcccceeeeecc--CceehhHHHhhhh-----hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccH
Confidence 44577999999999999998 6799999864322 4578899999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcccc
Q 002063 759 FQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDY 838 (973)
Q Consensus 759 ~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 838 (973)
+..|+.. ..+.......+..+||.||.||| .+.|||||||.-||||+.+..|||+|||-++..... ...
T Consensus 200 ~~VLka~-----~~itp~llv~Wsk~IA~GM~YLH---~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~---STk 268 (904)
T KOG4721|consen 200 YEVLKAG-----RPITPSLLVDWSKGIAGGMNYLH---LHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK---STK 268 (904)
T ss_pred HHHHhcc-----CccCHHHHHHHHHHhhhhhHHHH---HhhHhhhccCCCceEeeccceEEeccccchHhhhhh---hhh
Confidence 9999853 45677788899999999999999 789999999999999999999999999998866443 334
Q ss_pred cccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhh
Q 002063 839 SCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESI 918 (973)
Q Consensus 839 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (973)
..+.||..|||||+++..+.++|+||||||||||||+||..||.+-+.. ..+..+-...+.-..+
T Consensus 269 MSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss---------------AIIwGVGsNsL~LpvP 333 (904)
T KOG4721|consen 269 MSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS---------------AIIWGVGSNSLHLPVP 333 (904)
T ss_pred hhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh---------------eeEEeccCCcccccCc
Confidence 4578999999999999999999999999999999999999999764210 0011111122222334
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 919 KEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 919 ~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
..+++-|.-++..||+..|..||++++++.||+...+
T Consensus 334 stcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~p 370 (904)
T KOG4721|consen 334 STCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASP 370 (904)
T ss_pred ccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCH
Confidence 5566678889999999999999999999999987765
No 41
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-38 Score=345.00 Aligned_cols=253 Identities=27% Similarity=0.350 Sum_probs=213.0
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
.++-|+.++.||.|+.|.|-+|++..+|+.+|||++.+. .....+.+|+-+|+-+.|||+++++++|+...+.|+
T Consensus 10 tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lyl 89 (786)
T KOG0588|consen 10 TIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYL 89 (786)
T ss_pred cccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEE
Confidence 345678889999999999999999999999999998764 234568899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
|.||+++|.|++|+-++ ..+++.+..+++.||..|+.|+| ..+|+|||+||+|++++..+.+||+|||+|..
T Consensus 90 vlEyv~gGELFdylv~k-----G~l~e~eaa~ff~QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nIKIADFGMAsL 161 (786)
T KOG0588|consen 90 VLEYVPGGELFDYLVRK-----GPLPEREAAHFFRQILDGVSYCH---AFNICHRDLKPENLLLDVKNNIKIADFGMASL 161 (786)
T ss_pred EEEecCCchhHHHHHhh-----CCCCCHHHHHHHHHHHHHHHHHh---hhcceeccCCchhhhhhcccCEeeeccceeec
Confidence 99999999999999864 45788889999999999999999 78999999999999999999999999999976
Q ss_pred ccCCCCcccccccCcccccccccccccCCCC-ccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVS-EKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
..++.. ...-+|++.|.|||++.|.+|. .++||||+|||||.+++|+.||++. .+...........-
T Consensus 162 e~~gkl---LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd-----Nir~LLlKV~~G~f---- 229 (786)
T KOG0588|consen 162 EVPGKL---LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD-----NIRVLLLKVQRGVF---- 229 (786)
T ss_pred ccCCcc---ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc-----cHHHHHHHHHcCcc----
Confidence 544422 2235799999999999999986 7899999999999999999999743 33333322222111
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
+.+.....+..+++.+|+..||++|.|++||.+|..-..
T Consensus 230 --------~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g 268 (786)
T KOG0588|consen 230 --------EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSG 268 (786)
T ss_pred --------cCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhc
Confidence 122344556788999999999999999999999976543
No 42
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-38 Score=346.60 Aligned_cols=243 Identities=27% Similarity=0.379 Sum_probs=202.8
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec-----cccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCee
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-----GDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSS 746 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~-----~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 746 (973)
....+|...++||+|+||+|++|..+.+++.+|||++++ .++++....|.+++... +||.++.++.+|+..+++
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence 445688999999999999999999999999999999988 35677788899998877 599999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
|.||||+.||++..+.+ ...+++.+..-+|..|+.||.||| +++|||||||.+|||+|.+|.+||+|||++
T Consensus 445 ~fvmey~~Ggdm~~~~~------~~~F~e~rarfyaAev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh~kiADFGlc 515 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHIH------TDVFSEPRARFYAAEVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGHVKIADFGLC 515 (694)
T ss_pred EEEEEecCCCcEEEEEe------cccccHHHHHHHHHHHHHHHHHHH---hcCceeeecchhheEEcccCcEEecccccc
Confidence 99999999999655544 346889999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 827 KIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
+.--.. ....+.++||+.|||||++.+..|+.++|+|||||+||||+.|+.||.++.. . ......+....
T Consensus 516 Ke~m~~--g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddE--e---e~FdsI~~d~~--- 585 (694)
T KOG0694|consen 516 KEGMGQ--GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDE--E---EVFDSIVNDEV--- 585 (694)
T ss_pred cccCCC--CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCH--H---HHHHHHhcCCC---
Confidence 743211 2244568999999999999999999999999999999999999999976521 1 12222221111
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCH
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPM 943 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~ 943 (973)
..+.-.+.+...++.+++..+|++|.-+
T Consensus 586 ---------~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 586 ---------RYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred ---------CCCCcccHHHHHHHHHHhccCcccccCC
Confidence 1233445567788899999999999865
No 43
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=6e-38 Score=334.92 Aligned_cols=261 Identities=25% Similarity=0.350 Sum_probs=213.6
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
...+.++||+|-||+|.++.... +..||||+++.+ ....+|.+|+++|.+++||||++++++|..++..++|+|||
T Consensus 539 ~L~~~ekiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm 617 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEVEG-PLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM 617 (807)
T ss_pred heehhhhhcCcccceeEEEEecC-ceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence 34677999999999999999875 689999999874 34577999999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++|+|.+++..+.. +.+......+|+.|||+||+||. +.++||||+.++|+|++.++++||+|||+++-.-.++
T Consensus 618 EnGDLnqFl~ahea---pt~~t~~~vsi~tqiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~ 691 (807)
T KOG1094|consen 618 ENGDLNQFLSAHEL---PTAETAPGVSICTQIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGD 691 (807)
T ss_pred hcCcHHHHHHhccC---cccccchhHHHHHHHHHHHHHHH---hhchhhccccccceeecCcccEEecCcccccccccCC
Confidence 99999999987632 22455566789999999999999 8899999999999999999999999999999766555
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh--CCCCCCcccCCCccHHHHHHHhhcccccchhhccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT--GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDC 911 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
........+-+.+|||||.+.-+++++++|||+||+++||+++ ...||.+.. .++.++-......... .
T Consensus 692 yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt--~e~vven~~~~~~~~~-------~ 762 (807)
T KOG1094|consen 692 YYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLT--DEQVVENAGEFFRDQG-------R 762 (807)
T ss_pred ceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhh--HHHHHHhhhhhcCCCC-------c
Confidence 5555555667889999999999999999999999999999876 788997652 2222222222221111 1
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 912 EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 912 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
......+.-+...+++++.+||+.|-.+||+++++...|.+.
T Consensus 763 ~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 763 QVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred ceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 122233555677899999999999999999999999988764
No 44
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.7e-38 Score=324.08 Aligned_cols=254 Identities=26% Similarity=0.329 Sum_probs=210.3
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
...|+..+.||+|.-|+||+++...++..+|+|++.++ +...+...|.+||+.++||.+..+++.|+.+...|+|
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence 45678889999999999999999999999999999873 3345677899999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
||||+||+|....+++ ....++...++-+|.+++.||+||| -.|||+|||||+||||.++|++.|+||.++...
T Consensus 156 meyCpGGdL~~LrqkQ---p~~~fse~~aRFYaAEvl~ALEYLH---mlGivYRDLKPENILvredGHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQ---PGKRFSESAARFYAAEVLLALEYLH---MLGIVYRDLKPENILVREDGHIMLSDFDLSLRC 229 (459)
T ss_pred EecCCCccHHHHHhhC---CCCccchhhHHHHHHHHHHHHHHHH---hhceeeccCCcceeEEecCCcEEeeeccccccC
Confidence 9999999999988864 5667899999999999999999999 899999999999999999999999999997532
Q ss_pred cC---------------------------------CCC---------------------cccccccCccccccccccccc
Q 002063 830 EN---------------------------------SPK---------------------VSDYSCFAGTHGYIAPELAYT 855 (973)
Q Consensus 830 ~~---------------------------------~~~---------------------~~~~~~~~gt~~y~aPE~~~~ 855 (973)
.- ... ......++||-.|.|||++.|
T Consensus 230 ~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G 309 (459)
T KOG0610|consen 230 PVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG 309 (459)
T ss_pred CCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeec
Confidence 10 000 001113679999999999999
Q ss_pred CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCC
Q 002063 856 CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTK 935 (973)
Q Consensus 856 ~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~ 935 (973)
...+.++|+|+|||++|||+.|..||.+... ...+.+++.....-......+..+.++|++.+.+
T Consensus 310 ~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~---------------~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvK 374 (459)
T KOG0610|consen 310 EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNN---------------KETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVK 374 (459)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCcCCCCc---------------hhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhcc
Confidence 9999999999999999999999999987521 1122333333332222335567789999999999
Q ss_pred CCCCCCC----HHHHHHH
Q 002063 936 LPNLRPP----MREVVKM 949 (973)
Q Consensus 936 dP~~Rpt----~~evl~~ 949 (973)
||.+|.. +.||-+|
T Consensus 375 dP~kRlg~~rGA~eIK~H 392 (459)
T KOG0610|consen 375 DPSKRLGSKRGAAEIKRH 392 (459)
T ss_pred ChhhhhccccchHHhhcC
Confidence 9999998 8888776
No 45
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.8e-37 Score=341.25 Aligned_cols=265 Identities=24% Similarity=0.327 Sum_probs=203.5
Q ss_pred cCCcccCeecccCcEEEEEEEEcC----------------CCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKK----------------NAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKL 736 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~----------------~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l 736 (973)
.+|++.++||+|+||.||+|.+.. ++..||+|.+... ....++.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 478889999999999999998643 2347999988653 234568899999999999999999
Q ss_pred eEEEEeCCeeEEEEEccCCCchHHHHHhhhcC--------------CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEe
Q 002063 737 YACLLKGGSSFLVLEYMPNGNLFQALHKRVKE--------------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIH 802 (973)
Q Consensus 737 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH 802 (973)
++++.+.+..++||||+++|+|.+++...... ....+++..+..++.|++.||+||| +.+++|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS---SLNFVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH---HCCccc
Confidence 99999999999999999999999999753211 1234788899999999999999999 789999
Q ss_pred cCCCCCCeeecCCCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh--CCCC
Q 002063 803 RDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT--GRKP 880 (973)
Q Consensus 803 ~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~--g~~p 880 (973)
|||||+||+++.++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ +..|
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 99999999999999999999999986644332222223446789999999988899999999999999999987 5677
Q ss_pred CCcccCCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 881 VEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 881 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
|.... .......+............ ...+......+.+++.+||+.||++||++.+|.+.|++
T Consensus 242 ~~~~~--~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 242 YGELT--DEQVIENAGEFFRDQGRQVY-------LFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCcCC--HHHHHHHHHHHhhhcccccc-------ccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 76431 11222222111111100000 00111234568899999999999999999999998864
No 46
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-38 Score=320.51 Aligned_cols=262 Identities=24% Similarity=0.306 Sum_probs=203.5
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec----cccHHHHHHHHHHHHhcCCCceeeEeEEEEe-----CCee
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK----GDGVKVFAAEMEILGKIRHRNILKLYACLLK-----GGSS 746 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-----~~~~ 746 (973)
..|...+.||+|+||.|+.|.++.+|+.||||++.. ....++..||+++++.++|+||+.+++++.. -..+
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~Dv 101 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDV 101 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccccee
Confidence 345557899999999999999999999999999874 3456778899999999999999999999865 3468
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
|+|+|+| +.+|...++.. +.+......-+.+|+++|++|+| +.+|+|||+||.|++++.+...||||||+|
T Consensus 102 YiV~elM-etDL~~iik~~-----~~L~d~H~q~f~YQiLrgLKyiH---SAnViHRDLKPsNll~n~~c~lKI~DFGLA 172 (359)
T KOG0660|consen 102 YLVFELM-ETDLHQIIKSQ-----QDLTDDHAQYFLYQILRGLKYIH---SANVIHRDLKPSNLLLNADCDLKICDFGLA 172 (359)
T ss_pred EEehhHH-hhHHHHHHHcC-----ccccHHHHHHHHHHHHHhcchhh---cccccccccchhheeeccCCCEEeccccce
Confidence 9999999 67999988753 34778888899999999999999 889999999999999999999999999999
Q ss_pred ccccCCCCcccccccCcccccccccccc-cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCC-------------ccHH
Q 002063 827 KIAENSPKVSDYSCFAGTHGYIAPELAY-TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDG-------------KDIV 892 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~-------------~~~~ 892 (973)
+...........+..+.|..|+|||++. ...|+.+.||||+||++.||++|+.-|.+...-. .+..
T Consensus 173 R~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l 252 (359)
T KOG0660|consen 173 RYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDL 252 (359)
T ss_pred eeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHH
Confidence 9886543344456678899999999874 5679999999999999999999999996542110 0000
Q ss_pred HHH-----HHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 893 YWV-----STHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 893 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
..+ ...+.+.+.... ..+ ....+.......+++.+|+..||.+|+|+.|+++|-
T Consensus 253 ~~i~s~~ar~yi~slp~~p~---~~f-~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hP 311 (359)
T KOG0660|consen 253 QKIRSEKARPYIKSLPQIPK---QPF-SSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHP 311 (359)
T ss_pred HHhccHHHHHHHHhCCCCCC---CCH-HHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcCh
Confidence 000 001111110000 000 011123334567899999999999999999999873
No 47
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1e-37 Score=351.98 Aligned_cols=261 Identities=27% Similarity=0.392 Sum_probs=204.3
Q ss_pred hcCCcccCeecccCcEEEEEEEE-----cCCCceEEEEEeecc---ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCe
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDL-----KKNAGTVAVKQLWKG---DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGS 745 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~-----~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~ 745 (973)
.++|++.+.||+|+||+||+|++ .+++..||||++... ...+.+.+|+++++.+ +||||+++++++..++.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 34789999999999999999975 344668999998653 2345678999999999 89999999999999999
Q ss_pred eEEEEEccCCCchHHHHHhhhc----------------------------------------------------------
Q 002063 746 SFLVLEYMPNGNLFQALHKRVK---------------------------------------------------------- 767 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 767 (973)
.++||||+++|+|.++++....
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 9999999999999999975311
Q ss_pred ------------CCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc
Q 002063 768 ------------EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 768 ------------~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
.....+++..+..++.|+++||+||| +++++||||||+||+++.++.+||+|||+++........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 01124788899999999999999999 789999999999999999999999999999866433221
Q ss_pred ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhcccccc
Q 002063 836 SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVA 914 (973)
Q Consensus 836 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (973)
.......++..|+|||++.+..++.++|||||||++|||++ |..||.....+ ......+.... .
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~-~~~~~~~~~~~---~----------- 335 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD-SKFYKMIKEGY---R----------- 335 (375)
T ss_pred cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch-HHHHHHHHhCc---c-----------
Confidence 11222345678999999999999999999999999999998 88998654211 11111111110 0
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 915 SESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 915 ~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
...+.....++.+++.+||+.||++||++.||+++|++.
T Consensus 336 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 336 MLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 000111234688999999999999999999999999863
No 48
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.2e-37 Score=336.86 Aligned_cols=251 Identities=25% Similarity=0.310 Sum_probs=202.1
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
.|+..+.||+|+||+||+|.+..+++.||||++... .....+.+|++++++++|++|+++++++.+++..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 367788999999999999999999999999988652 223457789999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|+++|+|.+++... ....+++..+..++.|++.|++||| +.+|+||||||+||++++++.++|+|||++.....
T Consensus 81 ~~~~g~L~~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (285)
T cd05631 81 IMNGGDLKFHIYNM---GNPGFDEQRAIFYAAELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRISDLGLAVQIPE 154 (285)
T ss_pred ecCCCcHHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCC
Confidence 99999999888643 2335788999999999999999999 78999999999999999999999999999976533
Q ss_pred CCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccc
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDC 911 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
.. ......||..|+|||++.+..++.++||||+||++|||++|+.||...... .....+........
T Consensus 155 ~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~--~~~~~~~~~~~~~~-------- 221 (285)
T cd05631 155 GE---TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKER--VKREEVDRRVKEDQ-------- 221 (285)
T ss_pred CC---eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcc--hhHHHHHHHhhccc--------
Confidence 22 122346899999999999999999999999999999999999999754211 11111111111000
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHH
Q 002063 912 EVASESIKEDMIKLLKIAVVCTTKLPNLRPP-----MREVVKM 949 (973)
Q Consensus 912 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-----~~evl~~ 949 (973)
..........+.+++.+||+.||.+||+ +++++++
T Consensus 222 ---~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 222 ---EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred ---ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 0111223456788999999999999997 8888876
No 49
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2e-38 Score=324.08 Aligned_cols=249 Identities=24% Similarity=0.361 Sum_probs=209.3
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec-----cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~-----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
...+|++.+.||+|.||+|-+|+....|+.||||.+++ +.+.-.+.+|++||..++||||+.++++|+..+...+
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvi 130 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVI 130 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEE
Confidence 34688999999999999999999988899999998766 3445568899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||..+|.|++|+.++ ..+++.+..+++.||.+|+.|+| .++++|||+|.+|||+|+++.+||+|||++-.
T Consensus 131 vMEYaS~GeLYDYiSer-----~~LsErEaRhfFRQIvSAVhYCH---knrVvHRDLKLENILLD~N~NiKIADFGLSNl 202 (668)
T KOG0611|consen 131 VMEYASGGELYDYISER-----GSLSEREARHFFRQIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIKIADFGLSNL 202 (668)
T ss_pred EEEecCCccHHHHHHHh-----ccccHHHHHHHHHHHHHHHHHHh---hccceecccchhheeecCCCCeeeeccchhhh
Confidence 99999999999999864 46889999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCCcccccccCcccccccccccccCCCC-ccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVS-EKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
+..... .+.++|++-|.+||++.|.+|. +.+|.|||||+||.++.|..||++. +....++...... +
T Consensus 203 y~~~kf---LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~-----Dhk~lvrQIs~Ga--Y-- 270 (668)
T KOG0611|consen 203 YADKKF---LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR-----DHKRLVRQISRGA--Y-- 270 (668)
T ss_pred hccccH---HHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc-----hHHHHHHHhhccc--c--
Confidence 754422 3457899999999999999886 7899999999999999999999765 3333333221111 1
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
..+ +.+. ...-++++|+-.+|++|.|+.+|..|-+
T Consensus 271 -rEP----~~PS----dA~gLIRwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 271 -REP----ETPS----DASGLIRWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred -cCC----CCCc----hHHHHHHHHHhcCcccchhHHHHhhhhe
Confidence 111 1111 2345888999999999999999998865
No 50
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.5e-37 Score=350.31 Aligned_cols=261 Identities=26% Similarity=0.400 Sum_probs=203.9
Q ss_pred hcCCcccCeecccCcEEEEEEEEcC-----CCceEEEEEeeccc---cHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCe
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKK-----NAGTVAVKQLWKGD---GVKVFAAEMEILGKI-RHRNILKLYACLLKGGS 745 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~-----~~~~vavK~~~~~~---~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~ 745 (973)
.++|++.+.||+|+||.||+|++.. ++..||||++.... ....+.+|+++++.+ +||||+++++++..++.
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 3478999999999999999998643 34579999987532 345678899999999 89999999999999999
Q ss_pred eEEEEEccCCCchHHHHHhhhc----------------------------------------------------------
Q 002063 746 SFLVLEYMPNGNLFQALHKRVK---------------------------------------------------------- 767 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 767 (973)
.++||||+++|+|.++++....
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 9999999999999999865321
Q ss_pred -------CCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcccccc
Q 002063 768 -------EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDYSC 840 (973)
Q Consensus 768 -------~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~ 840 (973)
.....+++..+.+++.|++.||+||| +++++||||||+||+++.++.+||+|||+++.............
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~ 273 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGN 273 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccC
Confidence 01124688889999999999999999 78999999999999999999999999999976543322111122
Q ss_pred cCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhhH
Q 002063 841 FAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIK 919 (973)
Q Consensus 841 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (973)
..++..|+|||++.+..++.++|||||||++|||++ |+.||...... .......... . .. ..+.
T Consensus 274 ~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~-~~~~~~~~~~----~---~~-------~~~~ 338 (374)
T cd05106 274 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN-SKFYKMVKRG----Y---QM-------SRPD 338 (374)
T ss_pred CCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc-HHHHHHHHcc----c---Cc-------cCCC
Confidence 335678999999998899999999999999999997 99999754221 1111111110 0 00 0011
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 920 EDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 920 ~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
.....+.+++.+||+.||++||++.+|++.|+++
T Consensus 339 ~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 339 FAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1235688999999999999999999999999875
No 51
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-37 Score=352.52 Aligned_cols=257 Identities=25% Similarity=0.372 Sum_probs=213.4
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec--cccHHHHHHHHHHHHhcC-CCceeeEeEE-EEe------CCe
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK--GDGVKVFAAEMEILGKIR-HRNILKLYAC-LLK------GGS 745 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~-hpniv~l~~~-~~~------~~~ 745 (973)
.++++.+.|.+|||+.||.|++...+..||+|++.. +.......+|+++|+.++ |||||.+++. ... ..+
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 356788999999999999999998779999998765 445567889999999997 9999999993 321 246
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccC
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
+++.||||+||.|-|++..+.. ..+.+.++++|+.++|+|+++||.. +.+|||||||-+|||++.+|..||||||.
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq---~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGS 192 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQ---TRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGS 192 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHh---ccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccc
Confidence 8999999999999999987632 2389999999999999999999965 67899999999999999999999999999
Q ss_pred CccccCCCC-ccc------ccccCccccccccccc---ccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHH
Q 002063 826 AKIAENSPK-VSD------YSCFAGTHGYIAPELA---YTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWV 895 (973)
Q Consensus 826 ~~~~~~~~~-~~~------~~~~~gt~~y~aPE~~---~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~ 895 (973)
+.-.-.... ... .-...-|+.|+|||++ .+...++|+|||||||+||.++....||++..
T Consensus 193 att~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg---------- 262 (738)
T KOG1989|consen 193 ATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG---------- 262 (738)
T ss_pred cccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc----------
Confidence 874322221 110 0123568999999987 47789999999999999999999999998641
Q ss_pred HHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 896 STHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
-..+++..+.......+...+.+||+.||++||++||++.+|+.++.++..
T Consensus 263 ---------~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 263 ---------KLAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred ---------ceeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 134556666555557888899999999999999999999999999988764
No 52
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-38 Score=345.41 Aligned_cols=258 Identities=29% Similarity=0.409 Sum_probs=206.1
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCc---e-EEEEEeec-----cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAG---T-VAVKQLWK-----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~---~-vavK~~~~-----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
+....++||+|+||.||+|+.+..+. . ||||.... .....++.+|+++++.++|||||+++|+...+...|
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ 237 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLM 237 (474)
T ss_pred CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccE
Confidence 33556899999999999999985422 3 89998764 345667899999999999999999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+|||+|+||+|.+|++.. ...++..++..++.++|+||+||| +++++||||.++|+|++.++.+||+|||+++
T Consensus 238 ivmEl~~gGsL~~~L~k~----~~~v~~~ek~~~~~~AA~Gl~YLh---~k~~IHRDIAARNcL~~~~~~vKISDFGLs~ 310 (474)
T KOG0194|consen 238 LVMELCNGGSLDDYLKKN----KKSLPTLEKLRFCYDAARGLEYLH---SKNCIHRDIAARNCLYSKKGVVKISDFGLSR 310 (474)
T ss_pred EEEEecCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHhHHHHHH---HCCCcchhHhHHHheecCCCeEEeCcccccc
Confidence 999999999999999874 225899999999999999999999 8899999999999999999999999999987
Q ss_pred cccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 828 IAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
.... .........-+.+|+|||.+..+.|++++|||||||++||+++ |..||.+.. ..+...++. ..
T Consensus 311 ~~~~--~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~--~~~v~~kI~---~~----- 378 (474)
T KOG0194|consen 311 AGSQ--YVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMK--NYEVKAKIV---KN----- 378 (474)
T ss_pred CCcc--eeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCC--HHHHHHHHH---hc-----
Confidence 4431 1111111235689999999999999999999999999999999 888997652 112222220 11
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCCC
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCTD 958 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~ 958 (973)
......+...+..+..++..||..+|+.||+|.++.+.++.+.....
T Consensus 379 -----~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 379 -----GYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred -----CccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 11111122344556778889999999999999999999998765443
No 53
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6e-38 Score=337.67 Aligned_cols=251 Identities=25% Similarity=0.325 Sum_probs=213.7
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCe-eEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGS-SFLV 749 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~-~~lv 749 (973)
.++|+.++++|+|+||.++.++++.++..||+|.+.-+ ...+...+|+.++++++|||||.+.+.|.+++. .+||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 46789999999999999999999999999999988652 233456789999999999999999999998887 9999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|+|++||++.+.+.+.. ...+++.++..++.|++.|+.||| +..|+|||||+.|||++.++.|+|+|||+|+..
T Consensus 83 m~Y~eGg~l~~~i~~~k---~~~f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l 156 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQK---GVLFPEERILKWFVQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKIL 156 (426)
T ss_pred EeecCCCCHHHHHHHHh---hccccHHHHHHHHHHHHHHHHHHH---hhhhhcccchhhhhhccccCceeecchhhhhhc
Confidence 99999999999998752 466899999999999999999999 789999999999999999999999999999988
Q ss_pred cCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhc
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
.+.. ......+||+.||+||++.+.+|..++|||||||++|||++-+.+|.... ....+... .
T Consensus 157 ~~~~--~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~-----m~~Li~ki----------~ 219 (426)
T KOG0589|consen 157 NPED--SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASN-----MSELILKI----------N 219 (426)
T ss_pred CCch--hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccc-----hHHHHHHH----------h
Confidence 6653 12334689999999999999999999999999999999999999997652 11111111 1
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
... ....+..+...+..++..|++.+|+.||++.+++.+
T Consensus 220 ~~~-~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 220 RGL-YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred hcc-CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 111 122345567789999999999999999999999987
No 54
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1e-36 Score=338.78 Aligned_cols=263 Identities=24% Similarity=0.346 Sum_probs=205.7
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
++|++.+.||+|+||.||+|++..++..||+|++..+ ...+.+.+|++++++++||||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence 5789999999999999999999999999999988653 2345688999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
+++|+|.+++... ..+++..+..++.|++.|++|||+ ..+|+||||||+||+++.++.+||+|||++......
T Consensus 85 ~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~--~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 85 MDGGSLDQVLKEA-----KRIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred CCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHhh--cCCEEcCCCChhhEEEcCCCcEEEccCccccccccc
Confidence 9999999999753 347888899999999999999994 246999999999999999999999999998755332
Q ss_pred CCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccc-cc-------
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH-EN------- 904 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~------- 904 (973)
......|+..|+|||++.+..++.++||||+||++|||++|+.||..... ......+....... ..
T Consensus 158 ----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 231 (331)
T cd06649 158 ----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDA--KELEAIFGRPVVDGEEGEPHSISP 231 (331)
T ss_pred ----ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHhcccccccccCCccccCc
Confidence 12234689999999999999999999999999999999999999964321 11111110000000 00
Q ss_pred ------------------------chh-hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 905 ------------------------VLK-VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 905 ------------------------~~~-~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
... +...............++.+++.+||++||++|||+.|++++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~ 303 (331)
T cd06649 232 RPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTF 303 (331)
T ss_pred ccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChH
Confidence 000 00000000001123457899999999999999999999998864
No 55
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=6e-37 Score=333.60 Aligned_cols=260 Identities=25% Similarity=0.399 Sum_probs=208.0
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCC-----ceEEEEEeeccc---cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCee
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNA-----GTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSS 746 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~-----~~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 746 (973)
..+|++.+.||+|+||.||+|.....+ ..||+|.+.... ....+.+|++++++++||||+++++++...+..
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPT 83 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCce
Confidence 357889999999999999999986544 679999886532 345688999999999999999999999998899
Q ss_pred EEEEEccCCCchHHHHHhhhcCCC-----------CCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGK-----------PELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED 815 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~-----------~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~ 815 (973)
+++|||+++|+|.+++........ ..+++..+..++.|++.|++||| +.+++||||||+||+++++
T Consensus 84 ~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nil~~~~ 160 (283)
T cd05048 84 CMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS---SHHFVHRDLAARNCLVGEG 160 (283)
T ss_pred EEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccccceEEEcCC
Confidence 999999999999999976422111 45788899999999999999999 7899999999999999999
Q ss_pred CceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHH
Q 002063 816 YEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYW 894 (973)
Q Consensus 816 ~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~ 894 (973)
+.++|+|||++................++..|+|||++.+..++.++|||||||++|||++ |..||.... ..++...
T Consensus 161 ~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~--~~~~~~~ 238 (283)
T cd05048 161 LTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFS--NQEVIEM 238 (283)
T ss_pred CcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHH
Confidence 9999999999876543322222223456788999999988899999999999999999998 999996531 1122221
Q ss_pred HHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 895 VSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
+.. .. ........+.++.+++.+||+.||.+||+++||+++|+.+
T Consensus 239 i~~----~~----------~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 239 IRS----RQ----------LLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HHc----CC----------cCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 111 10 0111234456788999999999999999999999999753
No 56
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=5.4e-37 Score=340.54 Aligned_cols=247 Identities=24% Similarity=0.294 Sum_probs=203.6
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
...+|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++.+++..|+
T Consensus 16 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 95 (329)
T PTZ00263 16 KLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYF 95 (329)
T ss_pred CchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEE
Confidence 356889999999999999999999999999999998753 234568899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++..
T Consensus 96 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 167 (329)
T PTZ00263 96 LLEFVVGGELFTHLRKA-----GRFPNDVAKFYHAELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKK 167 (329)
T ss_pred EEcCCCCChHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEECCCCCEEEeeccCceE
Confidence 99999999999998753 35678888899999999999999 78999999999999999999999999999986
Q ss_pred ccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhh
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
..... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.... ...............
T Consensus 168 ~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~-----~~~~~~~i~~~~~~~--- 234 (329)
T PTZ00263 168 VPDRT-----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT-----PFRIYEKILAGRLKF--- 234 (329)
T ss_pred cCCCc-----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC-----HHHHHHHHhcCCcCC---
Confidence 54321 12468999999999999999999999999999999999999996431 111111111111100
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHHh
Q 002063 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPP-----MREVVKML 950 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-----~~evl~~L 950 (973)
+......+.+++.+||+.||.+||+ +.++++|-
T Consensus 235 ---------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp 272 (329)
T PTZ00263 235 ---------PNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHP 272 (329)
T ss_pred ---------CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCC
Confidence 1112345778999999999999997 68888763
No 57
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=3.3e-37 Score=336.43 Aligned_cols=246 Identities=22% Similarity=0.273 Sum_probs=202.9
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
++|++.+.||+|+||+||+|++..+++.||+|++... ...+.+.+|++++++++||||+++++++.++...|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 3688899999999999999999988999999998652 23456788999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++|+|.+++... ..+++.....++.|++.||+||| +++++||||||+||+++.++.+||+|||++....
T Consensus 81 e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~ 152 (291)
T cd05612 81 EYVPGGELFSYLRNS-----GRFSNSTGLFYASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLR 152 (291)
T ss_pred eCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEEecCcchhcc
Confidence 999999999999753 35788888999999999999999 7899999999999999999999999999987653
Q ss_pred CCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcc
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
.. .....|++.|+|||++.+..++.++||||+||++|||++|+.||.... ..............
T Consensus 153 ~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~-----~~~~~~~i~~~~~~------ 216 (291)
T cd05612 153 DR-----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDN-----PFGIYEKILAGKLE------ 216 (291)
T ss_pred CC-----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCcC------
Confidence 32 122468999999999999889999999999999999999999996531 11111111111110
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHHhh
Q 002063 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPP-----MREVVKMLA 951 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-----~~evl~~L~ 951 (973)
.+......+.+++.+|++.||.+||+ +.|+++|-.
T Consensus 217 ------~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~ 256 (291)
T cd05612 217 ------FPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRW 256 (291)
T ss_pred ------CCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCcc
Confidence 11112345788999999999999995 999988843
No 58
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=5.9e-37 Score=334.05 Aligned_cols=263 Identities=21% Similarity=0.265 Sum_probs=200.7
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
+++|++.+.||+|+||+||+|++..+++.||+|++... .....+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE 83 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence 45789999999999999999999999999999988642 234467799999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|++ |+|.+++... ...+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++....
T Consensus 84 ~~~-~~l~~~l~~~----~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~ 155 (288)
T cd07871 84 YLD-SDLKQYLDNC----GNLMSMHNVKIFMFQLLRGLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLARAKSV 155 (288)
T ss_pred CCC-cCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEECcCcceeeccC
Confidence 996 5899888653 234688899999999999999999 78999999999999999999999999999875433
Q ss_pred CCCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcc---------
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNN--------- 901 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~--------- 901 (973)
... ......+++.|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+......
T Consensus 156 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T cd07871 156 PTK--TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVK--EELHLIFRLLGTPTEETWPGI 231 (288)
T ss_pred CCc--cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCChHHhhcc
Confidence 221 2223467899999998865 56889999999999999999999999654211 111111000000
Q ss_pred --cccchhhccccccChh----hHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 902 --HENVLKVLDCEVASES----IKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 902 --~~~~~~~~~~~~~~~~----~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.........+...... ......+..+++.+|+++||.+|||+.|+++|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 232 TSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred ccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000001111110000 11223457899999999999999999999875
No 59
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=5.6e-37 Score=339.69 Aligned_cols=241 Identities=26% Similarity=0.320 Sum_probs=197.6
Q ss_pred CeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCC
Q 002063 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNG 756 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 756 (973)
+.||+|+||+||+|++..+++.||||++... .....+.+|++++++++||||+++++++..++..|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 4689999999999999999999999998753 23456778999999999999999999999999999999999999
Q ss_pred chHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcc
Q 002063 757 NLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVS 836 (973)
Q Consensus 757 sL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 836 (973)
+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... .
T Consensus 81 ~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~--~ 150 (323)
T cd05571 81 ELFFHLSRE-----RVFSEDRARFYGAEIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG--A 150 (323)
T ss_pred cHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC--C
Confidence 999998753 35788899999999999999999 7899999999999999999999999999987532211 1
Q ss_pred cccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccCh
Q 002063 837 DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASE 916 (973)
Q Consensus 837 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (973)
......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ............. .
T Consensus 151 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~-----~~~~~~~~~~~~~------------~ 213 (323)
T cd05571 151 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HEKLFELILMEEI------------R 213 (323)
T ss_pred cccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCC-----HHHHHHHHHcCCC------------C
Confidence 2233568999999999999999999999999999999999999996531 1111111111111 0
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 002063 917 SIKEDMIKLLKIAVVCTTKLPNLRP-----PMREVVKM 949 (973)
Q Consensus 917 ~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 949 (973)
.+......+.+++.+|++.||++|| ++.++++|
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 214 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 1122345678899999999999999 89999875
No 60
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=8.8e-37 Score=331.16 Aligned_cols=244 Identities=23% Similarity=0.334 Sum_probs=196.4
Q ss_pred CeecccCcEEEEEEEEcCCCceEEEEEeeccc--c---HHHHHHHHHHHHhcCCCceeeEeEEEEe----CCeeEEEEEc
Q 002063 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD--G---VKVFAAEMEILGKIRHRNILKLYACLLK----GGSSFLVLEY 752 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~---~~~~~~E~~~l~~l~hpniv~l~~~~~~----~~~~~lv~e~ 752 (973)
..||+|++|.||+|++. |+.||||++.... . .+.+.+|++++++++||||+++++++.+ ....++||||
T Consensus 26 ~~i~~g~~~~v~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 26 VLIKENDQNSIYKGIFN--NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred eEEeeCCceEEEEEEEC--CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 67999999999999984 8899999886531 1 4667899999999999999999999876 3468999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
+++|+|.+++... ..+++.....++.|++.|++|+|+ ..+++||||||+||+++.++.+||+|||+++.....
T Consensus 104 ~~~g~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lH~--~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~ 176 (283)
T PHA02988 104 CTRGYLREVLDKE-----KDLSFKTKLDMAIDCCKGLYNLYK--YTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP 176 (283)
T ss_pred CCCCcHHHHHhhC-----CCCChhHHHHHHHHHHHHHHHHHh--cCCCCCCcCChhhEEECCCCcEEEcccchHhhhccc
Confidence 9999999999753 357888999999999999999994 247889999999999999999999999998765332
Q ss_pred CCcccccccCccccccccccccc--CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcc
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYT--CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
. ....|+..|+|||++.+ ..++.++|||||||++|||++|+.||.... ..............
T Consensus 177 ~-----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~-----~~~~~~~i~~~~~~------ 240 (283)
T PHA02988 177 P-----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLT-----TKEIYDLIINKNNS------ 240 (283)
T ss_pred c-----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhcCCC------
Confidence 1 12457899999999876 678999999999999999999999997541 11221211111110
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
...+......+.+++.+||+.||++|||++|+++.|+...
T Consensus 241 ----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 241 ----LKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred ----CCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 0111123456889999999999999999999999998764
No 61
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-39 Score=306.65 Aligned_cols=255 Identities=24% Similarity=0.303 Sum_probs=207.5
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec----cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
.+.|++.+.||+|.|+.||+..+..+|+.+|+|.+.. ..+.+.+.+|+.|-+.++||||+++.+.+.++...|+|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 4578888999999999999999999999999997754 356788999999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC---CCceEEecccCCc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE---DYEPKIADFGVAK 827 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~Dfgl~~ 827 (973)
|+|+|++|..-+-.+ ...++..+-+.+.||++|+.|+| .++|||||+||+|+++.. ...+|++|||+|.
T Consensus 90 e~m~G~dl~~eIV~R-----~~ySEa~aSH~~rQiLeal~yCH---~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi 161 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR-----EFYSEADASHCIQQILEALAYCH---SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAI 161 (355)
T ss_pred ecccchHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeeeeccCCCceeecccceEE
Confidence 999999997666443 23567778899999999999999 899999999999999954 3459999999999
Q ss_pred cccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 828 IAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
.+..+. ....++||++|||||+++..+|+.++|||+.||+||-++.|..||.++.. . ..........
T Consensus 162 ~l~~g~---~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~--~---rlye~I~~g~----- 228 (355)
T KOG0033|consen 162 EVNDGE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--H---RLYEQIKAGA----- 228 (355)
T ss_pred EeCCcc---ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH--H---HHHHHHhccc-----
Confidence 886332 23346899999999999999999999999999999999999999986411 1 1111111110
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
-.+.+..+....+...+++++|+..||.+|.|+.|.+.|-+-.
T Consensus 229 ---yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~ 271 (355)
T KOG0033|consen 229 ---YDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWIC 271 (355)
T ss_pred ---cCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhc
Confidence 0112223344556678899999999999999999999876543
No 62
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=7.6e-37 Score=340.49 Aligned_cols=253 Identities=21% Similarity=0.247 Sum_probs=204.8
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
++|++.+.||+|+||.||+|++..+++.||||++... .....+.+|+++++.++||||+++++++..++..|+||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 3688999999999999999999998999999998753 23456788999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 81 e~~~g~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~ 152 (333)
T cd05600 81 EYVPGGDFRTLLNNL-----GVLSEDHARFYMAEMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIV 152 (333)
T ss_pred eCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEEEeCcCCcccc
Confidence 999999999999753 35788889999999999999999 7899999999999999999999999999997554
Q ss_pred CCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcc
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
. ......||+.|+|||++.+..++.++||||+||++|||++|+.||.... .............. ..
T Consensus 153 ~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~~~~~----~~ 218 (333)
T cd05600 153 T-----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGST-----PNETWENLKYWKET----LQ 218 (333)
T ss_pred c-----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCC-----HHHHHHHHHhcccc----cc
Confidence 3 1223568999999999999999999999999999999999999997531 11111111110000 00
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
..............+.+++.+|++.+|++||++.+++++-
T Consensus 219 ~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~ 258 (333)
T cd05600 219 RPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHP 258 (333)
T ss_pred CCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCc
Confidence 0000000123355688999999999999999999999873
No 63
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=9.9e-37 Score=328.38 Aligned_cols=254 Identities=25% Similarity=0.364 Sum_probs=202.6
Q ss_pred cCCcccCeecccCcEEEEEEEEc---CCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLK---KNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~---~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
.+|++.+.||+|+||.||+|.+. ..+..||+|.+... .....+.+|++++++++||||+++++++..++..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 46888999999999999999875 34668999988764 2335688999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++|+|.+++... ...+++..+..++.|++.|++||| +.+++||||||+||+++.++.++++|||.+...
T Consensus 85 ~e~~~~~~L~~~l~~~----~~~l~~~~~~~~~~~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 85 TEYMSNGALDSFLRKH----EGQLVAGQLMGMLPGLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQED 157 (266)
T ss_pred EEeCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence 9999999999999753 235789999999999999999999 789999999999999999999999999987643
Q ss_pred cCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhh
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
..... .......++..|+|||++.+..++.++|||||||++||+++ |+.||.... ... ..........
T Consensus 158 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~--~~~---~~~~~~~~~~----- 226 (266)
T cd05064 158 KSEAI-YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMS--GQD---VIKAVEDGFR----- 226 (266)
T ss_pred cccch-hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCC--HHH---HHHHHHCCCC-----
Confidence 22211 11112345678999999999999999999999999999875 999996541 111 1111111100
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
...+......+.+++..||+.+|++||++.++.+.|.++
T Consensus 227 ------~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 227 ------LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred ------CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 011223445688899999999999999999999998764
No 64
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.4e-36 Score=331.44 Aligned_cols=263 Identities=22% Similarity=0.282 Sum_probs=201.6
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
++|++.+.||+|+||+||+|+++.+++.||||++... ...+.+.+|++++++++||||+++++++..++..|+|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 3688999999999999999999999999999988653 234567889999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|++++.+..+... ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++.....
T Consensus 81 ~~~~~~l~~~~~~-----~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 152 (287)
T cd07848 81 YVEKNMLELLEEM-----PNGVPPEKVRSYIYQLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSE 152 (287)
T ss_pred cCCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccCcccccc
Confidence 9998766544332 235788899999999999999999 78999999999999999999999999999986543
Q ss_pred CCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhc-----------
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLN----------- 900 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~----------- 900 (973)
... .......|++.|+|||++.+..++.++||||+||++|||++|+.||..... .+....+.....
T Consensus 153 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07848 153 GSN-ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESE--IDQLFTIQKVLGPLPAEQMKLFY 229 (287)
T ss_pred ccc-ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHhhCCCCHHHHHhhh
Confidence 221 122234689999999999988899999999999999999999999975321 110000000000
Q ss_pred ccccchhhccccc------cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 901 NHENVLKVLDCEV------ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 901 ~~~~~~~~~~~~~------~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
..........+.. ...........+.+++.+|+++||++|||++++++|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 230 SNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred ccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000000000 000011234568999999999999999999999875
No 65
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.3e-36 Score=343.47 Aligned_cols=263 Identities=25% Similarity=0.363 Sum_probs=205.9
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCC-----CceEEEEEeecc---ccHHHHHHHHHHHHhcC-CCceeeEeEEEEeCCe
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKN-----AGTVAVKQLWKG---DGVKVFAAEMEILGKIR-HRNILKLYACLLKGGS 745 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~-----~~~vavK~~~~~---~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~ 745 (973)
.++|++.+.||+|+||.||+|.+... +..||||++... ...+.+.+|+++++++. ||||+++++++.+.+.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 34778899999999999999987432 346999998653 23456889999999996 9999999999999999
Q ss_pred eEEEEEccCCCchHHHHHhhhcC---------------------------------------------------------
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKE--------------------------------------------------------- 768 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~--------------------------------------------------------- 768 (973)
.|+||||+++|+|.++++.....
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 99999999999999998754210
Q ss_pred ----------------------------------CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC
Q 002063 769 ----------------------------------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE 814 (973)
Q Consensus 769 ----------------------------------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~ 814 (973)
....+++..+..++.|+++|++||| +.+++||||||+||+++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dikp~Nill~~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA---SKNCVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHhEEEeC
Confidence 0124778888999999999999999 789999999999999999
Q ss_pred CCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHH
Q 002063 815 DYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVY 893 (973)
Q Consensus 815 ~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~ 893 (973)
++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||.....+. ...
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~-~~~- 350 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS-TFY- 350 (400)
T ss_pred CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH-HHH-
Confidence 99999999999986543322222223456788999999998899999999999999999997 999996532111 110
Q ss_pred HHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 894 WVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
....... ...........+.+++.+||+.+|++||++.+|.++|+++.+
T Consensus 351 ---~~~~~~~----------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 351 ---NKIKSGY----------RMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred ---HHHhcCC----------CCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 1111110 001112334568899999999999999999999999987643
No 66
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=8.6e-37 Score=314.53 Aligned_cols=272 Identities=21% Similarity=0.267 Sum_probs=206.4
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc----cHHHHHHHHHHHHhcCCCc-eeeEeEEEEeCC-----
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIRHRN-ILKLYACLLKGG----- 744 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~hpn-iv~l~~~~~~~~----- 744 (973)
...|+..++||+|+||+||+|+.+.+|+.||+|++.-+. ......+|+.++++++|+| |+++++++....
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 456778888999999999999999999999999987532 2344689999999999999 999999998766
Q ss_pred -eeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecc
Q 002063 745 -SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADF 823 (973)
Q Consensus 745 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 823 (973)
..++||||+ .-+|.+|+....... ..++...+..++.|++.|++||| +++|+||||||+||+++++|.+||+||
T Consensus 90 ~~l~lvfe~~-d~DL~~ymd~~~~~~-~g~~~~~ik~~m~Qll~gl~~~H---~~~IlHRDLKPQNlLi~~~G~lKlaDF 164 (323)
T KOG0594|consen 90 GKLYLVFEFL-DRDLKKYMDSLPKKP-QGLPPRLIKSFMRQLLRGLAFLH---SHGILHRDLKPQNLLISSSGVLKLADF 164 (323)
T ss_pred ceEEEEEEee-cccHHHHHHhccccc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCcceEEECCCCcEeeecc
Confidence 789999999 569999998753211 34566789999999999999999 899999999999999999999999999
Q ss_pred cCCccccCCCCcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHH-hhc-
Q 002063 824 GVAKIAENSPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVST-HLN- 900 (973)
Q Consensus 824 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~-~~~- 900 (973)
|+|+...-+ ...++..++|..|+|||++.+. .|++.+||||+||+++||++++.-|.+... ..++...... ...
T Consensus 165 GlAra~~ip--~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se-~~ql~~If~~lGtP~ 241 (323)
T KOG0594|consen 165 GLARAFSIP--MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE-IDQLFRIFRLLGTPN 241 (323)
T ss_pred chHHHhcCC--cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH-HHHHHHHHHHcCCCC
Confidence 999865433 2335567889999999999877 699999999999999999999999976532 1111111111 000
Q ss_pred -cccc-chhhccc--ccc----Ch----hhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH--hhcCC
Q 002063 901 -NHEN-VLKVLDC--EVA----SE----SIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM--LADAD 954 (973)
Q Consensus 901 -~~~~-~~~~~~~--~~~----~~----~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~--L~~~~ 954 (973)
..++ .....+- .+. .. ..+.......+++.+|++++|.+|.++..+++| +....
T Consensus 242 e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~ 309 (323)
T KOG0594|consen 242 EKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELP 309 (323)
T ss_pred ccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccc
Confidence 0000 0000000 000 00 011111357789999999999999999999988 65553
No 67
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.5e-36 Score=352.94 Aligned_cols=253 Identities=23% Similarity=0.285 Sum_probs=204.0
Q ss_pred CCcccCeecccCcEEEEEEEEcCC-CceEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKN-AGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.|.+.+.||+|+||.||+|....+ ++.||+|.+... .....+.+|+++++.++||||+++++++..++..|+||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 488899999999999999998877 778899876442 33456788999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++|+|.+++.... .....+++..+..++.|++.||+|+| +++|+||||||+||+++.++.+||+|||+++......
T Consensus 148 ~gg~L~~~l~~~~-~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~ 223 (478)
T PTZ00267 148 SGGDLNKQIKQRL-KEHLPFQEYEVGLLFYQIVLALDEVH---SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV 223 (478)
T ss_pred CCCCHHHHHHHHH-hccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence 9999999987542 23445788899999999999999999 7899999999999999999999999999998764432
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
.........||+.|+|||++.+..++.++||||+||++|||++|+.||.... .............
T Consensus 224 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~-----~~~~~~~~~~~~~---------- 288 (478)
T PTZ00267 224 SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPS-----QREIMQQVLYGKY---------- 288 (478)
T ss_pred ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCC----------
Confidence 2222334568999999999999999999999999999999999999996431 1111111111100
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
...+......+.+++.+||+.||++||++.+++++
T Consensus 289 -~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 289 -DPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred -CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 00111234568899999999999999999998753
No 68
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-37 Score=321.26 Aligned_cols=249 Identities=23% Similarity=0.333 Sum_probs=215.0
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
..+-|...+.||+|.|+.|-+|++--+|+.||||++.+. .....+.+|++.|+-++|||||++|++...+...|+|
T Consensus 16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLi 95 (864)
T KOG4717|consen 16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLI 95 (864)
T ss_pred eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEE
Confidence 345688899999999999999999999999999999873 3455678999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeee-cCCCceEEecccCCcc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL-DEDYEPKIADFGVAKI 828 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill-~~~~~~kl~Dfgl~~~ 828 (973)
.|.=++|+|++|+-++ ...+.+....+++.||..|+.|+| +..+||||+||+||.+ ..-|-+|++|||++-.
T Consensus 96 LELGD~GDl~DyImKH----e~Gl~E~La~kYF~QI~~AI~YCH---qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNk 168 (864)
T KOG4717|consen 96 LELGDGGDLFDYIMKH----EEGLNEDLAKKYFAQIVHAISYCH---QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNK 168 (864)
T ss_pred EEecCCchHHHHHHhh----hccccHHHHHHHHHHHHHHHHHHh---hhhhhcccCCcceeEEeeecCceEeeecccccc
Confidence 9999999999999876 234777888899999999999999 7899999999999765 5678999999999988
Q ss_pred ccCCCCcccccccCcccccccccccccCCCC-ccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVS-EKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
+.++.. ....+|+..|-|||++.|..|+ +++|||||||+||-+++|+.||+... ..+.+..
T Consensus 169 f~PG~k---L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAN---------------DSETLTm 230 (864)
T KOG4717|consen 169 FQPGKK---LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAN---------------DSETLTM 230 (864)
T ss_pred CCCcch---hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCcccccc---------------chhhhhh
Confidence 876644 3346799999999999999997 67999999999999999999997641 2233556
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
++|+.+. .+.....++.++|..|+..||.+|.+..||+.+
T Consensus 231 ImDCKYt--vPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 231 IMDCKYT--VPSHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred hhccccc--CchhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 7777763 345667789999999999999999999999754
No 69
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.3e-36 Score=325.12 Aligned_cols=255 Identities=26% Similarity=0.350 Sum_probs=206.5
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccC
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
.+|++.+.||+|+||.||+|.+.++++.||+|++... ...+.+.+|++++++++||||+++++++..++..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 85 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence 3578889999999999999999988999999987653 345678899999999999999999999999999999999999
Q ss_pred CCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCC
Q 002063 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~ 834 (973)
+++|.+++... ....+++..+..++.|+++|++||| +.+++||||||+||++++++.+||+|||++........
T Consensus 86 ~~~L~~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~ 159 (263)
T cd05052 86 YGNLLDYLREC---NRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 159 (263)
T ss_pred CCcHHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCcEEeCCCcccccccccee
Confidence 99999999753 2345789999999999999999999 78999999999999999999999999999876643322
Q ss_pred cccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhccccc
Q 002063 835 VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 835 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
. ......++..|+|||++.+..++.++|||||||++|||++ |..||.... ........... .
T Consensus 160 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~-----~~~~~~~~~~~-----------~ 222 (263)
T cd05052 160 T-AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKG-----------Y 222 (263)
T ss_pred e-ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHHHCC-----------C
Confidence 1 1112234568999999998899999999999999999998 999986431 11111111110 0
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
...........+.+++.+|++.+|++||++.+++++|+.+
T Consensus 223 ~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 223 RMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 0111122345688899999999999999999999999864
No 70
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=4.9e-36 Score=323.41 Aligned_cols=260 Identities=21% Similarity=0.314 Sum_probs=210.3
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec-----cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~-----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
++|++.+.||+|+||.||+|+...+++.||||.+.. ......+.+|++++++++||||+++++++...+..++||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 578999999999999999999998899999998754 223456788999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++|+|.+++.... .....++...+..++.|++.|++||| +++++||||||+||+++.++.++++|||.+....
T Consensus 82 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~ 157 (267)
T cd08228 82 ELADAGDLSQMIKYFK-KQKRLIPERTVWKYFVQLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCcHHHHHHHhh-hccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCCEEECccccceecc
Confidence 9999999999987542 22345788899999999999999999 7899999999999999999999999999987654
Q ss_pred CCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcc
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
.... ......|+..|+|||.+.+..++.++||||+|+++|||++|+.||..... +...+..... ..
T Consensus 158 ~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~---~~~~~~~~~~-~~-------- 223 (267)
T cd08228 158 SKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLFSLCQKIE-QC-------- 223 (267)
T ss_pred chhH--HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc---cHHHHHHHHh-cC--------
Confidence 3221 11234578899999999888899999999999999999999999965322 1112211111 00
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
.............+.+++.+||+.+|++||++.+|++.+++++
T Consensus 224 -~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 224 -DYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred -CCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 0111112234466889999999999999999999999998865
No 71
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2.9e-36 Score=331.37 Aligned_cols=264 Identities=21% Similarity=0.254 Sum_probs=198.7
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
++|++.+.||+|+||+||+|+...+++.||||++... .....+.+|+++++.++||||+++++++.++...++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY 84 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence 5789999999999999999999988999999988652 2234567899999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
++ ++|.+++... ...++...+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 85 ~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 156 (303)
T cd07869 85 VH-TDLCQYMDKH----PGGLHPENVKLFLFQLLRGLSYIH---QRYILHRDLKPQNLLISDTGELKLADFGLARAKSVP 156 (303)
T ss_pred CC-cCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECCCCcceeccCC
Confidence 95 6888887653 235788889999999999999999 789999999999999999999999999998754322
Q ss_pred CCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcc-cccchh---
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNN-HENVLK--- 907 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~--- 907 (973)
. .......+++.|+|||++.+ ..++.++||||+||++|||++|+.||.................... ......
T Consensus 157 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
T cd07869 157 S--HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHS 234 (303)
T ss_pred C--ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhh
Confidence 1 12233567899999999865 4578899999999999999999999975421111111111100000 000000
Q ss_pred --hcccc-c---cChhhH------HHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 908 --VLDCE-V---ASESIK------EDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 908 --~~~~~-~---~~~~~~------~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
..++. . ...... .....+.+++.+|++.||.+|||+.|+++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 235 LPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred ccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 00000 0 000000 112457789999999999999999999975
No 72
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=7.8e-37 Score=327.45 Aligned_cols=249 Identities=33% Similarity=0.516 Sum_probs=194.2
Q ss_pred ccCeecccCcEEEEEEEEc----CCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 680 EDNLIGSGGTGKVYRLDLK----KNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 680 ~~~~lG~G~~g~Vy~a~~~----~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
..+.||.|.||.||+|.+. ..+..|+||.++.. ...+.+.+|++.+++++||||+++++++...+..++||||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 4578999999999999998 44678999998653 2357889999999999999999999999988889999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
+++|+|.+++... ....+++..+..++.|+|+||+||| +.+++|+||+++||+++.++.+||+|||++......
T Consensus 83 ~~~g~L~~~L~~~---~~~~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~ 156 (259)
T PF07714_consen 83 CPGGSLDDYLKSK---NKEPLSEQQRLSIAIQIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK 156 (259)
T ss_dssp -TTEBHHHHHHHT---CTTTSBHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTS
T ss_pred ccccccccccccc---ccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc
Confidence 9999999999864 3456899999999999999999999 678999999999999999999999999999876333
Q ss_pred CCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhccc
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDC 911 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
..............|+|||.+.+..++.++||||||+++||+++ |+.||.+. ... ...... .....
T Consensus 157 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~--~~~---~~~~~~-~~~~~------- 223 (259)
T PF07714_consen 157 SKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY--DNE---EIIEKL-KQGQR------- 223 (259)
T ss_dssp SSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS--CHH---HHHHHH-HTTEE-------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccc---cccccc-ccccc-------
Confidence 22222333456789999999999889999999999999999999 78998654 111 111111 11110
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 912 EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 912 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
..........+.+++..||+.+|++||++.++++.|
T Consensus 224 ---~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 224 ---LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ---TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ---ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 011122345688999999999999999999999876
No 73
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.8e-36 Score=335.05 Aligned_cols=257 Identities=24% Similarity=0.344 Sum_probs=203.1
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCce----EEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGT----VAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~----vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
..+|+..+.||+|+||+||+|++..+++. ||||++... ...+++.+|+.+++.++||||+++++++..+ ..+
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~ 84 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 84 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cce
Confidence 34789999999999999999998765553 899987643 3346788999999999999999999988764 578
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+|+||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 85 ~v~e~~~~g~l~~~l~~~----~~~~~~~~~~~~~~qi~~~L~~LH---~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~ 157 (316)
T cd05108 85 LITQLMPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLE---ERRLVHRDLAARNVLVKTPQHVKITDFGLAK 157 (316)
T ss_pred eeeecCCCCCHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEecCCCcEEEccccccc
Confidence 999999999999999753 235788899999999999999999 7899999999999999999999999999998
Q ss_pred cccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 828 IAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
...............++..|+|||++.+..++.++|||||||++||+++ |+.||.... ...+.... ......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~--~~~~~~~~----~~~~~~- 230 (316)
T cd05108 158 LLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSIL----EKGERL- 230 (316)
T ss_pred cccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHH----hCCCCC-
Confidence 7654322222222334678999999999999999999999999999998 999996531 11111111 111100
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
..+......+.+++.+||+.+|++||++.++++++..+..
T Consensus 231 ---------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 231 ---------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred ---------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 0011123457889999999999999999999999987654
No 74
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.9e-36 Score=338.85 Aligned_cols=263 Identities=23% Similarity=0.260 Sum_probs=200.7
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccC
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
..+|++.+.||+|+||.||+|++..+++.||+|+.. ...+.+|++++++++||||+++++++..+...++|||++
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~----~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~- 165 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ----RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY- 165 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh----hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC-
Confidence 357999999999999999999999999999999653 234678999999999999999999999999999999999
Q ss_pred CCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCC
Q 002063 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~ 834 (973)
+++|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.......
T Consensus 166 ~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~ 237 (391)
T PHA03212 166 KTDLYCYLAAK-----RNIAICDILAIERSVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA 237 (391)
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccc
Confidence 47898888643 34788999999999999999999 78999999999999999999999999999875432211
Q ss_pred cccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCC------ccHHHHHHHhhccc------
Q 002063 835 VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDG------KDIVYWVSTHLNNH------ 902 (973)
Q Consensus 835 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~------~~~~~~~~~~~~~~------ 902 (973)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||-...... ..+...+...-...
T Consensus 238 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~ 316 (391)
T PHA03212 238 -NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPID 316 (391)
T ss_pred -cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcc
Confidence 12233579999999999998899999999999999999999998875432110 01111111000000
Q ss_pred --ccchhhc---------cccc--cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 903 --ENVLKVL---------DCEV--ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 903 --~~~~~~~---------~~~~--~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
....... .+.. ...........+.+++.+|++.||++|||+.|++++-.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~ 378 (391)
T PHA03212 317 AQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAA 378 (391)
T ss_pred hhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChh
Confidence 0000000 0000 00111234557889999999999999999999997543
No 75
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2.6e-36 Score=334.15 Aligned_cols=241 Identities=27% Similarity=0.330 Sum_probs=196.4
Q ss_pred CeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCC
Q 002063 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNG 756 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 756 (973)
+.||+|+||.||+|+...+++.||+|++... .....+.+|++++++++||||+++++++..++..|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 4689999999999999999999999998753 23455678999999999999999999999999999999999999
Q ss_pred chHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcc
Q 002063 757 NLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVS 836 (973)
Q Consensus 757 sL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 836 (973)
+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++....... .
T Consensus 81 ~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~--~ 150 (323)
T cd05595 81 ELFFHLSRE-----RVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--A 150 (323)
T ss_pred cHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCC--C
Confidence 999888653 35788999999999999999999 7899999999999999999999999999987432221 1
Q ss_pred cccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccCh
Q 002063 837 DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASE 916 (973)
Q Consensus 837 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (973)
......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ............. .
T Consensus 151 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~-----~~~~~~~~~~~~~--------~---- 213 (323)
T cd05595 151 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HERLFELILMEEI--------R---- 213 (323)
T ss_pred ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCC-----HHHHHHHHhcCCC--------C----
Confidence 2223568999999999999999999999999999999999999996431 1111111111110 0
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 002063 917 SIKEDMIKLLKIAVVCTTKLPNLRP-----PMREVVKM 949 (973)
Q Consensus 917 ~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 949 (973)
.+......+.+++.+|++.||++|| ++.+++++
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 214 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 1112345678899999999999998 88888875
No 76
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2.7e-36 Score=334.64 Aligned_cols=242 Identities=27% Similarity=0.331 Sum_probs=197.9
Q ss_pred CeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCC
Q 002063 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNG 756 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 756 (973)
+.||+|+||.||+|++..+++.||||++.+. .....+.+|+++++.++||||+++++++..++..|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 4689999999999999999999999998753 33456788999999999999999999999999999999999999
Q ss_pred chHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcc
Q 002063 757 NLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVS 836 (973)
Q Consensus 757 sL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 836 (973)
+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++...... .
T Consensus 81 ~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~--~ 150 (328)
T cd05593 81 ELFFHLSRE-----RVFSEDRTRFYGAEIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA--A 150 (328)
T ss_pred CHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcc--c
Confidence 999888643 35789999999999999999999 7899999999999999999999999999987532211 1
Q ss_pred cccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccCh
Q 002063 837 DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASE 916 (973)
Q Consensus 837 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (973)
......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ............. .
T Consensus 151 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~-----~~~~~~~~~~~~~--------~---- 213 (328)
T cd05593 151 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HEKLFELILMEDI--------K---- 213 (328)
T ss_pred ccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCC-----HHHHHHHhccCCc--------c----
Confidence 2233568999999999998899999999999999999999999996531 1111111111110 0
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHh
Q 002063 917 SIKEDMIKLLKIAVVCTTKLPNLRP-----PMREVVKML 950 (973)
Q Consensus 917 ~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~L 950 (973)
.+......+.+++.+|+++||++|| ++.+++++-
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~ 252 (328)
T cd05593 214 FPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHS 252 (328)
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCC
Confidence 1112345678899999999999997 899998763
No 77
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=3.5e-36 Score=349.48 Aligned_cols=256 Identities=27% Similarity=0.302 Sum_probs=206.0
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCC-----
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGG----- 744 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----- 744 (973)
...+|++.+.||+|+||+||+|++..+++.||||++... .....+.+|+..+..++|+|++++.+.+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 346899999999999999999999999999999998652 33456788999999999999999988775432
Q ss_pred ---eeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEe
Q 002063 745 ---SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIA 821 (973)
Q Consensus 745 ---~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 821 (973)
..++||||+++|+|.+++..+.. ....+++..+..++.|++.||+|+| +.+|+||||||+||+++.++.+||+
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~-~~~~l~e~~~~~i~~qll~aL~~lH---~~~IiHrDLKP~NILl~~~~~vkL~ 185 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAK-TNRTFREHEAGLLFIQVLLAVHHVH---SKHMIHRDIKSANILLCSNGLVKLG 185 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEeCCCCEEEE
Confidence 36899999999999999976432 3346888999999999999999999 7899999999999999999999999
Q ss_pred cccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcc
Q 002063 822 DFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNN 901 (973)
Q Consensus 822 Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 901 (973)
|||+++...............||+.|+|||++.+..++.++|||||||++|||++|+.||... +....+......
T Consensus 186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~-----~~~~~~~~~~~~ 260 (496)
T PTZ00283 186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGE-----NMEEVMHKTLAG 260 (496)
T ss_pred ecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHhcC
Confidence 999998665432222233457899999999999999999999999999999999999999653 222222221111
Q ss_pred cccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 902 HENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.. ...+......+.+++.+||+.||.+||++.+++++
T Consensus 261 ~~-----------~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 261 RY-----------DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CC-----------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 10 00112234568899999999999999999999876
No 78
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=8.6e-36 Score=331.34 Aligned_cols=263 Identities=25% Similarity=0.372 Sum_probs=203.3
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
++|++.+.||+|+||.||+|++..++..||+|.+... .....+.+|++++++++||||+++++++.+++..++||||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEec
Confidence 5789999999999999999999988999999987653 2345688999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
+++|+|.+++... ..+++..+..++.|++.|++|||+ ..+++||||||+||+++.++.+||+|||++......
T Consensus 85 ~~~~~L~~~l~~~-----~~~~~~~~~~~~~~l~~~l~~lH~--~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 85 MDGGSLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred CCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 9999999999753 247888889999999999999994 347999999999999999999999999998755322
Q ss_pred CCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccc---------
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE--------- 903 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~--------- 903 (973)
. .....|+..|+|||++.+..++.++||||+||++|||++|+.||..... ...............
T Consensus 158 ~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 231 (333)
T cd06650 158 M----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDA--KELELMFGCPVEGDPAESETSPRP 231 (333)
T ss_pred c----cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcch--hHHHHHhcCcccCCccccccCccc
Confidence 1 1234688999999999988899999999999999999999999975321 111111000000000
Q ss_pred ------------------cchhhcc---ccccChh-hHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 904 ------------------NVLKVLD---CEVASES-IKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 904 ------------------~~~~~~~---~~~~~~~-~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
......+ ....... ......++.+++.+||++||++||++.|++++-.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~ 301 (333)
T cd06650 232 RPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAF 301 (333)
T ss_pred CCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHH
Confidence 0000000 0000000 0012346889999999999999999999987644
No 79
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=2.2e-36 Score=336.18 Aligned_cols=246 Identities=24% Similarity=0.286 Sum_probs=201.4
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCC-ceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNA-GTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~-~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
..++|++.+.||+|+||+||+|++...+ ..||+|++... ...+.+.+|+++++.++||||+++++++.+++..|
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~ 107 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY 107 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence 4567899999999999999999976544 68999988652 34456788999999999999999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.
T Consensus 108 lv~Ey~~~g~L~~~i~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~ 179 (340)
T PTZ00426 108 LVLEFVIGGEFFTFLRRN-----KRFPNDVGCFYAAQIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFIKMTDFGFAK 179 (340)
T ss_pred EEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEecCCCCe
Confidence 999999999999999753 35788899999999999999999 7899999999999999999999999999997
Q ss_pred cccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 828 IAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..............
T Consensus 180 ~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-----~~~~~~~i~~~~~~--- 246 (340)
T PTZ00426 180 VVDTR-----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE-----PLLIYQKILEGIIY--- 246 (340)
T ss_pred ecCCC-----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCC-----HHHHHHHHhcCCCC---
Confidence 65322 123468999999999998889999999999999999999999997531 11111111111110
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRP-----PMREVVKM 949 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 949 (973)
.+......+.+++.+|++.||++|+ +++++++|
T Consensus 247 ---------~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 247 ---------FPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred ---------CCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 0111234577899999999999995 89999887
No 80
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=4e-36 Score=321.11 Aligned_cols=248 Identities=26% Similarity=0.345 Sum_probs=197.5
Q ss_pred CeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCCch
Q 002063 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNGNL 758 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL 758 (973)
+.||+|+||+||+|++..+++.||+|..... .....+.+|++++++++||||+++++++..+...++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 3689999999999999988999999987542 3346688999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcccc
Q 002063 759 FQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDY 838 (973)
Q Consensus 759 ~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 838 (973)
.+++... ...+++..+..++.|+++||+||| +.+++||||||+||+++.++.+|++|||++............
T Consensus 81 ~~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 153 (252)
T cd05084 81 LTFLRTE----GPRLKVKELIQMVENAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTG 153 (252)
T ss_pred HHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEEcCCCcEEECccccCcccccccccccC
Confidence 9998743 335789999999999999999999 789999999999999999999999999998754432111111
Q ss_pred cccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChh
Q 002063 839 SCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASES 917 (973)
Q Consensus 839 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (973)
....++..|+|||.+.++.++.++||||+||++|||++ |..||..... ......+. ... ....
T Consensus 154 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~--~~~~~~~~----~~~----------~~~~ 217 (252)
T cd05084 154 GMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN--QQTREAIE----QGV----------RLPC 217 (252)
T ss_pred CCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH--HHHHHHHH----cCC----------CCCC
Confidence 11223467999999998889999999999999999998 8888864311 11111111 100 0011
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 918 IKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 918 ~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
.......+.+++.+|++.+|++||++.++.++|+.
T Consensus 218 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 218 PELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 12234568899999999999999999999998863
No 81
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=2.3e-36 Score=339.20 Aligned_cols=250 Identities=28% Similarity=0.383 Sum_probs=196.8
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
..+|+..+.||+|+||+||+|++..+++.||||++... .....+.+|++++++++|+||+++++++..++..|+|||
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 152 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLE 152 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEe
Confidence 45677889999999999999999988999999998653 234568899999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|+++|+|.+.. ..++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 153 ~~~~~~L~~~~---------~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~ 220 (353)
T PLN00034 153 FMDGGSLEGTH---------IADEQFLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQ 220 (353)
T ss_pred cCCCCcccccc---------cCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEcccccceeccc
Confidence 99999985432 2456677889999999999999 78999999999999999999999999999976543
Q ss_pred CCCcccccccCccccccccccccc-----CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYT-----CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
... ......||..|+|||++.. ...+.++|||||||++|||++|+.||.... ..+............
T Consensus 221 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~--~~~~~~~~~~~~~~~---- 292 (353)
T PLN00034 221 TMD--PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGR--QGDWASLMCAICMSQ---- 292 (353)
T ss_pred ccc--cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCC--CccHHHHHHHHhccC----
Confidence 211 1223568999999998743 234568999999999999999999997321 112111111111000
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
...........+.+++.+||+.||++||++.|+++|-.
T Consensus 293 -------~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~ 330 (353)
T PLN00034 293 -------PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPF 330 (353)
T ss_pred -------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 01111233456889999999999999999999998844
No 82
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2.8e-36 Score=332.57 Aligned_cols=239 Identities=25% Similarity=0.344 Sum_probs=195.0
Q ss_pred ecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCCch
Q 002063 684 IGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNGNL 758 (973)
Q Consensus 684 lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL 758 (973)
||+|+||+||+|++..+++.||+|++... .....+.+|++++++++||||+++++++..++..|+||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 69999999999999999999999998652 3345678899999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcccc
Q 002063 759 FQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDY 838 (973)
Q Consensus 759 ~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 838 (973)
.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.++|+|||+++...... ...
T Consensus 81 ~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~ 150 (312)
T cd05585 81 FHHLQRE-----GRFDLSRARFYTAELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD--DKT 150 (312)
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC--Ccc
Confidence 9998753 35788899999999999999999 7899999999999999999999999999987542221 122
Q ss_pred cccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhh
Q 002063 839 SCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESI 918 (973)
Q Consensus 839 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (973)
....||+.|+|||++.+..++.++||||+||++|||++|+.||... +............. ..+
T Consensus 151 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~-----~~~~~~~~~~~~~~------------~~~ 213 (312)
T cd05585 151 NTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDE-----NVNEMYRKILQEPL------------RFP 213 (312)
T ss_pred ccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCC-----CHHHHHHHHHcCCC------------CCC
Confidence 3356899999999999999999999999999999999999999653 12222222211111 011
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCC---HHHHHHH
Q 002063 919 KEDMIKLLKIAVVCTTKLPNLRPP---MREVVKM 949 (973)
Q Consensus 919 ~~~~~~l~~l~~~cl~~dP~~Rpt---~~evl~~ 949 (973)
......+.+++.+||+.||.+||+ +.|++.|
T Consensus 214 ~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 214 DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 223456788999999999999975 5676665
No 83
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=3.3e-36 Score=327.18 Aligned_cols=259 Identities=27% Similarity=0.369 Sum_probs=206.3
Q ss_pred hcCCcccCeecccCcEEEEEEEEcC-----CCceEEEEEeeccc---cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCee
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKK-----NAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSS 746 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~-----~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 746 (973)
..+|.+.+.||+|+||.||+|+... +++.||||.+.... ..+.+.+|++++++++||||+++++++..+...
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 3568889999999999999998753 35789999887632 346789999999999999999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhh---------cCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCc
Q 002063 747 FLVLEYMPNGNLFQALHKRV---------KEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE 817 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~---------~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 817 (973)
++||||+++++|.+++.... ......+++..+..++.|++.|++|+| +++++||||||+||+++.++.
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA---SQHFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeeccccccceEEEcCCCe
Confidence 99999999999999997642 122345788899999999999999999 789999999999999999999
Q ss_pred eEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHH
Q 002063 818 PKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVS 896 (973)
Q Consensus 818 ~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~ 896 (973)
++|+|||++................+++.|+|||++.+..++.++||||+||++|||++ |+.||.... ... ...
T Consensus 161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~--~~~---~~~ 235 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLS--NEE---VIE 235 (280)
T ss_pred EEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCC--HHH---HHH
Confidence 99999999876533222111223345788999999999999999999999999999998 999986542 111 111
Q ss_pred HhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 897 THLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
....... ..........+.+++.+||+.||++||++.||++.|++
T Consensus 236 ~~~~~~~-----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 236 CITQGRL-----------LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HHHcCCc-----------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 1111000 01111234568899999999999999999999998863
No 84
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=4.8e-36 Score=323.26 Aligned_cols=255 Identities=27% Similarity=0.394 Sum_probs=205.0
Q ss_pred cCCcccCeecccCcEEEEEEEEcCC---CceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKN---AGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~---~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
++|++.+.||+|+||+||+|++... ...||||++... .....+.+|+.++++++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 4688999999999999999998643 457999987653 2345688899999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++++|.+++... ...+++..+..++.|++.|++||| +++++||||||+||++++++.++++|||++...
T Consensus 84 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 156 (266)
T cd05033 84 TEYMENGSLDKFLREN----DGKFTVGQLVGMLRGIASGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRL 156 (266)
T ss_pred EEcCCCCCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCCEEECccchhhcc
Confidence 9999999999999753 236889999999999999999999 789999999999999999999999999999877
Q ss_pred cCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhh
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
.............++..|+|||.+.+..++.++||||||+++|||++ |..||.... .......+. ....
T Consensus 157 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~--~~~~~~~~~---~~~~----- 226 (266)
T cd05033 157 EDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMS--NQDVIKAVE---DGYR----- 226 (266)
T ss_pred cccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCC--HHHHHHHHH---cCCC-----
Confidence 52222212222345678999999998899999999999999999998 999996431 111111111 1000
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
..........+.+++.+|++.+|++||++.+++++|.++
T Consensus 227 ------~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 227 ------LPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 001122345688999999999999999999999999865
No 85
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-37 Score=329.51 Aligned_cols=254 Identities=26% Similarity=0.372 Sum_probs=217.1
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
+....++||-|.||.||.|.|++..-.||||.++.+ ...++|..|+.+|+.++|||+|+++++|..+...|||+|||..
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~y 347 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCY 347 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccC
Confidence 446778999999999999999988889999998763 5678999999999999999999999999999999999999999
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
|+|.+|+++. .+..++....+.||.||++||+||. .+++||||+.++|.||.++..+|++|||+++.+.....
T Consensus 348 GNLLdYLRec---nr~ev~avvLlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTY- 420 (1157)
T KOG4278|consen 348 GNLLDYLREC---NRSEVPAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTY- 420 (1157)
T ss_pred ccHHHHHHHh---chhhcchhHHHHHHHHHHHHHHHHH---HhhhhhhhhhhhhccccccceEEeeccchhhhhcCCce-
Confidence 9999999875 3445677778899999999999999 88999999999999999999999999999998854422
Q ss_pred ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhcccccc
Q 002063 836 SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVA 914 (973)
Q Consensus 836 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (973)
..+....-++.|.|||-+.-..++.++|||+|||+|||+.| |-.||.+. +..+ ....+...+.
T Consensus 421 TAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi-----dlSq-----------VY~LLEkgyR 484 (1157)
T KOG4278|consen 421 TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLSQ-----------VYGLLEKGYR 484 (1157)
T ss_pred ecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCc-----cHHH-----------HHHHHhcccc
Confidence 23333344678999999988899999999999999999999 87888543 2222 2334444555
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 915 SESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 915 ~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
.+.+..++++++++++.||+|+|.+||+++|+-+.++.+
T Consensus 485 M~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtm 523 (1157)
T KOG4278|consen 485 MDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETM 523 (1157)
T ss_pred ccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHH
Confidence 566777888999999999999999999999999988864
No 86
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.5e-36 Score=335.82 Aligned_cols=262 Identities=29% Similarity=0.399 Sum_probs=204.0
Q ss_pred cCCcccCeecccCcEEEEEEEEcC-----CCceEEEEEeeccc---cHHHHHHHHHHHHhc-CCCceeeEeEEEEe-CCe
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKK-----NAGTVAVKQLWKGD---GVKVFAAEMEILGKI-RHRNILKLYACLLK-GGS 745 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~-----~~~~vavK~~~~~~---~~~~~~~E~~~l~~l-~hpniv~l~~~~~~-~~~ 745 (973)
++|++.+.||+|+||.||+|.... +++.||+|++.... ..+.+.+|+++++++ +||||+++++++.. +..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 368999999999999999997543 35789999886532 334577899999999 89999999998765 456
Q ss_pred eEEEEEccCCCchHHHHHhhhcC--------------------------------------------------------C
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKE--------------------------------------------------------G 769 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~--------------------------------------------------------~ 769 (973)
.+++|||+++|+|.+++...... .
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY 166 (337)
T ss_pred EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence 88999999999999998643110 0
Q ss_pred CCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcccccccCccccccc
Q 002063 770 KPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIA 849 (973)
Q Consensus 770 ~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~a 849 (973)
...+++..+..++.||+.|++||| +.+|+||||||+||+++.++.++|+|||++................++..|+|
T Consensus 167 ~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 243 (337)
T cd05054 167 KEPLTLEDLISYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 243 (337)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccC
Confidence 125789999999999999999999 78999999999999999999999999999987643322222233456778999
Q ss_pred ccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHH
Q 002063 850 PELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKI 928 (973)
Q Consensus 850 PE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 928 (973)
||++.+..++.++||||+||++|||++ |..||...... ....... ..... ...+.....++.++
T Consensus 244 PE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~-~~~~~~~----~~~~~----------~~~~~~~~~~~~~l 308 (337)
T cd05054 244 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID-EEFCRRL----KEGTR----------MRAPEYATPEIYSI 308 (337)
T ss_pred cHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc-HHHHHHH----hccCC----------CCCCccCCHHHHHH
Confidence 999999999999999999999999998 99999653211 1111111 11100 00111234568899
Q ss_pred HHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 929 AVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 929 ~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
+.+||+.+|++||++.|++++|+++..
T Consensus 309 ~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 309 MLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 999999999999999999999987643
No 87
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=6.4e-36 Score=324.46 Aligned_cols=247 Identities=26% Similarity=0.299 Sum_probs=197.7
Q ss_pred ecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCCch
Q 002063 684 IGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNGNL 758 (973)
Q Consensus 684 lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL 758 (973)
||+|+||+||++.+..+++.||+|++... ...+.+..|++++++++||||+++.+++..+...|+||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 69999999999999999999999998653 2335567899999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcccc
Q 002063 759 FQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDY 838 (973)
Q Consensus 759 ~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 838 (973)
.+++... ......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++|+|||.+........ ..
T Consensus 81 ~~~~~~~-~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--~~ 154 (280)
T cd05608 81 RYHIYNV-DEENPGFPEPRACFYTAQIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS--KT 154 (280)
T ss_pred HHHHHhc-cccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc--cc
Confidence 9888643 223456889999999999999999999 78999999999999999999999999999876543322 12
Q ss_pred cccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhh
Q 002063 839 SCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESI 918 (973)
Q Consensus 839 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (973)
....||+.|+|||++.+..++.++||||+||++|||++|+.||....... .......... . .. ...+
T Consensus 155 ~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~-~---------~~--~~~~ 221 (280)
T cd05608 155 KGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRIL-N---------DS--VTYP 221 (280)
T ss_pred cccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-hHHHHHHhhc-c---------cC--CCCc
Confidence 23468999999999999999999999999999999999999997542111 1111111110 0 00 0111
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 002063 919 KEDMIKLLKIAVVCTTKLPNLRP-----PMREVVKM 949 (973)
Q Consensus 919 ~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 949 (973)
......+.+++.+|++.||++|| +++++++|
T Consensus 222 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 222 DKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 23445688999999999999999 77888875
No 88
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=309.61 Aligned_cols=267 Identities=27% Similarity=0.351 Sum_probs=207.1
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHh--cCCCceeeEeEEEEeC----CeeEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGK--IRHRNILKLYACLLKG----GSSFLV 749 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~--l~hpniv~l~~~~~~~----~~~~lv 749 (973)
.+..+.+.||+|.||+||+|+++ |+.||||++...+ .+.+.+|.++++. ++|+||+.+++.-..+ ...|+|
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srd-E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLv 287 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRD-ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLV 287 (513)
T ss_pred heeEEEEEecCccccceeecccc--CCceEEEEecccc-hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEe
Confidence 45677899999999999999999 8899999876544 4556788888776 4999999999876543 357999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhc-----CCCCeEecCCCCCCeeecCCCceEEeccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHD-----CSPPIIHRDIKSSNILLDEDYEPKIADFG 824 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~-----~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 824 (973)
++|.+.|||+|||.+. .++....++++..+|.||++||.+ .++.|.|||||..||||..++.+.|+|+|
T Consensus 288 TdYHe~GSL~DyL~r~------tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLG 361 (513)
T KOG2052|consen 288 TDYHEHGSLYDYLNRN------TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 361 (513)
T ss_pred eecccCCcHHHHHhhc------cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeece
Confidence 9999999999999864 578889999999999999999963 46789999999999999999999999999
Q ss_pred CCccccCCCCc--ccccccCcccccccccccccC----CCC--ccchHHHHHHHHHHHHhC----------CCCCCcccC
Q 002063 825 VAKIAENSPKV--SDYSCFAGTHGYIAPELAYTC----KVS--EKSDVFSFGVVLLELVTG----------RKPVEEEYG 886 (973)
Q Consensus 825 l~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~----~~~--~~~DvwslG~~l~ell~g----------~~pf~~~~~ 886 (973)
+|......... ......+||.+|||||++... .+. ..+||||||.|+||++.+ +.||.+.-.
T Consensus 362 LAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp 441 (513)
T KOG2052|consen 362 LAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVP 441 (513)
T ss_pred eeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCC
Confidence 99887654322 233457899999999998532 222 358999999999999862 467766544
Q ss_pred CCccHHHHHHHhhcccccchhhcccc-ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCC
Q 002063 887 DGKDIVYWVSTHLNNHENVLKVLDCE-VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCT 957 (973)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 957 (973)
.+.++.++.+-. -.+ -..+. .......+....+.++++.||..+|..|-|+--+-+.|.++....
T Consensus 442 ~DPs~eeMrkVV-Cv~-----~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~~ 507 (513)
T KOG2052|consen 442 SDPSFEEMRKVV-CVQ-----KLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNSD 507 (513)
T ss_pred CCCCHHHHhcce-eec-----ccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcCh
Confidence 444444442211 000 00111 112234466778889999999999999999999999999887643
No 89
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=3e-36 Score=337.13 Aligned_cols=263 Identities=22% Similarity=0.325 Sum_probs=197.1
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeC-----CeeE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKG-----GSSF 747 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~~~ 747 (973)
+|++.+.||+|+||.||+|++..+++.||||++... ....++.+|++++++++||||+++++++... ...|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 578899999999999999999999999999988642 3345678999999999999999999987543 2479
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+||||++ ++|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 81 lv~e~~~-~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~ 151 (338)
T cd07859 81 VVFELME-SDLHQVIKAN-----DDLTPEHHQFFLYQLLRALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLAR 151 (338)
T ss_pred EEEecCC-CCHHHHHHhc-----ccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEccCcccc
Confidence 9999994 6898888643 35789999999999999999999 7899999999999999999999999999997
Q ss_pred cccCCCCc-ccccccCccccccccccccc--CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccc--
Q 002063 828 IAENSPKV-SDYSCFAGTHGYIAPELAYT--CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH-- 902 (973)
Q Consensus 828 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~-- 902 (973)
........ .......||..|+|||++.+ ..++.++||||+||++|||++|+.||..... ......+.......
T Consensus 152 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~--~~~~~~~~~~~~~~~~ 229 (338)
T cd07859 152 VAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV--VHQLDLITDLLGTPSP 229 (338)
T ss_pred ccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCCh--HHHHHHHHHHhCCCCH
Confidence 55322111 11233568999999999865 6789999999999999999999999965321 00000000000000
Q ss_pred -----------ccchhhcccccc---ChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 903 -----------ENVLKVLDCEVA---SESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 903 -----------~~~~~~~~~~~~---~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
............ ..........+.+++.+||+.||++||++.|++++-
T Consensus 230 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp 291 (338)
T cd07859 230 ETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADP 291 (338)
T ss_pred HHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCc
Confidence 000000000000 000111234578999999999999999999999873
No 90
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=6e-36 Score=325.57 Aligned_cols=251 Identities=26% Similarity=0.324 Sum_probs=202.7
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
+|++.+.||+|+||+||+|.+..+++.||||++... .....+.+|++++++++||||+++++++..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 478889999999999999999988999999988652 223456789999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|+++|+|.+++... ....+++..+..++.|++.|++||| +.+++||||||+||++++++.++|+|||++.....
T Consensus 81 ~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 154 (285)
T cd05605 81 LMNGGDLKFHIYNM---GNPGFDEERAVFYAAEITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPE 154 (285)
T ss_pred ccCCCcHHHHHHhc---CcCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence 99999999888643 2345889999999999999999999 78999999999999999999999999999876543
Q ss_pred CCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccc
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDC 911 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
... .....|+..|+|||++.+..++.++||||+||++|||++|+.||..... ......+........
T Consensus 155 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~-------- 221 (285)
T cd05605 155 GET---IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKE--KVKREEVERRVKEDQ-------- 221 (285)
T ss_pred CCc---cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCch--hhHHHHHHHHhhhcc--------
Confidence 221 1234689999999999988899999999999999999999999975421 111111111111100
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 002063 912 EVASESIKEDMIKLLKIAVVCTTKLPNLRP-----PMREVVKM 949 (973)
Q Consensus 912 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 949 (973)
..........+.+++.+||+.||.+|| ++.+++++
T Consensus 222 ---~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 222 ---EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred ---cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 011223455678999999999999999 88899776
No 91
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=4e-36 Score=325.89 Aligned_cols=260 Identities=22% Similarity=0.317 Sum_probs=203.7
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcC-----CCceEEEEEeeccc---cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCe
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKK-----NAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGS 745 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~-----~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 745 (973)
..++|++.+.||+|+||.||+|.+.. ++..||||++.... ...++.+|+.+++.++||||+++++++..+..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 34678999999999999999998752 35679999876432 34467899999999999999999999999999
Q ss_pred eEEEEEccCCCchHHHHHhhhcC-----CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEE
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKE-----GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKI 820 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~-----~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 820 (973)
.++||||+++|+|.+++...... .....++..+..++.|++.|++||| +.+++||||||+||++++++.+++
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCcchheEEEcCCCCEEE
Confidence 99999999999999999753211 1234578888999999999999999 789999999999999999999999
Q ss_pred ecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhh
Q 002063 821 ADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHL 899 (973)
Q Consensus 821 ~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~ 899 (973)
+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||.... .........
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~-----~~~~~~~~~ 235 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMS-----NEQVLRFVM 235 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHHH
Confidence 99999876543322222222345778999999998889999999999999999999 788986531 111111111
Q ss_pred cccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 900 NNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
.... . .........+.+++.+|++.+|++||++.|+++++++
T Consensus 236 ~~~~--~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 236 EGGL--L---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred cCCc--C---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 1110 0 0111234468899999999999999999999999864
No 92
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=5.7e-36 Score=321.69 Aligned_cols=255 Identities=26% Similarity=0.390 Sum_probs=205.5
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec-cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.++|++.++||+|+||.||+|.... +..||+|.+.. ....+.+.+|+.++++++||||+++++++..++..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNN-STKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecC-CceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 4578899999999999999999764 67899998765 334567899999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++|+|.+++... ....+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|+|||++.......
T Consensus 84 ~~~~L~~~l~~~---~~~~~~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05072 84 AKGSLLDFLKSD---EGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE 157 (261)
T ss_pred CCCcHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCCccceecCCCc
Confidence 999999999753 2345788899999999999999999 7899999999999999999999999999998664332
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
.. ......++..|+|||++.+..++.++|||||||++|+|++ |+.||.... .......+. .... .
T Consensus 158 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~--~~~~~~~~~----~~~~------~- 223 (261)
T cd05072 158 YT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMS--NSDVMSALQ----RGYR------M- 223 (261)
T ss_pred ee-ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCC--HHHHHHHHH----cCCC------C-
Confidence 11 1222345678999999988889999999999999999998 999996531 111111111 1100 0
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
........++.+++.+|++.+|++||+++++.+.|+++
T Consensus 224 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 224 ---PRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred ---CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 01112335688999999999999999999999999863
No 93
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=5.3e-36 Score=324.84 Aligned_cols=260 Identities=25% Similarity=0.309 Sum_probs=204.3
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcC-----CCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCe
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKK-----NAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGS 745 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~-----~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 745 (973)
..++|++.+.||+|+||.||+|.+.. .+..||+|..... .....+.+|+.++++++||||+++++++.+...
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 34578899999999999999999986 6788999987642 234568899999999999999999999998889
Q ss_pred eEEEEEccCCCchHHHHHhhhcC--CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCC---ceEE
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKE--GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY---EPKI 820 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~--~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~---~~kl 820 (973)
.++||||+++++|.+++...... ....+++..+..++.||+.|++||| +++++||||||+||+++.++ .+|+
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchheEEEeccCCCcceEe
Confidence 99999999999999999765221 1235889999999999999999999 78999999999999998765 5999
Q ss_pred ecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhh
Q 002063 821 ADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHL 899 (973)
Q Consensus 821 ~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~ 899 (973)
+|||+++................+..|+|||++.+..++.++|||||||++|||++ |+.||.... ....... ..
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~--~~~~~~~---~~ 235 (277)
T cd05036 161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRT--NQEVMEF---VT 235 (277)
T ss_pred ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHH---HH
Confidence 99999986643322221222234568999999998999999999999999999997 999996531 1111111 11
Q ss_pred cccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 900 NNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
.... ...+......+.+++.+|++.+|++||++.+|+++|.+
T Consensus 236 ~~~~-----------~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 236 GGGR-----------LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred cCCc-----------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 1100 01112234568899999999999999999999999863
No 94
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=6.7e-36 Score=320.13 Aligned_cols=251 Identities=25% Similarity=0.367 Sum_probs=201.4
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccC
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
++|++.+.||+|+||.||+|+++. +..+|+|.+... ...+.+.+|++++++++||||+++++++..++..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 457888999999999999998875 568999987653 345678899999999999999999999999999999999999
Q ss_pred CCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCC
Q 002063 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~ 834 (973)
+|+|.++++.. ...+++..+..++.|++.||+||| +++++||||||+||+++.++.+|++|||.++.......
T Consensus 83 ~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05114 83 NGCLLNYLRQR----QGKLSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY 155 (256)
T ss_pred CCcHHHHHHhC----ccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCCCCccccCCCce
Confidence 99999998753 235789999999999999999999 78999999999999999999999999999876543222
Q ss_pred cccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhccccc
Q 002063 835 VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 835 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
. ......++..|+|||++.+..++.++||||||+++|||++ |+.||.... ....+........ ...+
T Consensus 156 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~-----~~~~~~~i~~~~~----~~~~-- 223 (256)
T cd05114 156 T-SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS-----NYEVVEMISRGFR----LYRP-- 223 (256)
T ss_pred e-ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHHHCCCC----CCCC--
Confidence 1 1122235668999999988889999999999999999999 899996531 1111111111110 0001
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
......+.+++.+||+++|++||++.++++.|.
T Consensus 224 -----~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 224 -----KLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred -----CCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 112346889999999999999999999998863
No 95
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.2e-36 Score=342.01 Aligned_cols=253 Identities=26% Similarity=0.329 Sum_probs=205.1
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
++|++.+.||+|+||+||+|++..+++.||||++... .....+.+|++++..++||||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 3688999999999999999999999999999998753 34456888999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 81 e~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~ 152 (350)
T cd05573 81 EYMPGGDLMNLLIRK-----DVFPEETARFYIAELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMN 152 (350)
T ss_pred cCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEeecCCCCccCc
Confidence 999999999999753 35788899999999999999999 7899999999999999999999999999997654
Q ss_pred CCC---------------------------CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCc
Q 002063 831 NSP---------------------------KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEE 883 (973)
Q Consensus 831 ~~~---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~ 883 (973)
... .........||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~ 232 (350)
T cd05573 153 KAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYS 232 (350)
T ss_pred ccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCC
Confidence 332 00112235689999999999999999999999999999999999999975
Q ss_pred ccCCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCC-HHHHHHHh
Q 002063 884 EYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPP-MREVVKML 950 (973)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-~~evl~~L 950 (973)
.. ............... ...........+.+++.+|++ ||.+||+ +.+++++.
T Consensus 233 ~~-----~~~~~~~i~~~~~~~--------~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp 286 (350)
T cd05573 233 DT-----LQETYNKIINWKESL--------RFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHP 286 (350)
T ss_pred CC-----HHHHHHHHhccCCcc--------cCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCC
Confidence 42 111111111100000 000001134567889999997 9999999 99999874
No 96
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-38 Score=309.68 Aligned_cols=251 Identities=23% Similarity=0.350 Sum_probs=215.0
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCC
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNG 756 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 756 (973)
-|.+..+||+|+||.||+|.++++|+.||||++..+.+.+++..|+.++++.+.|++|++|+.|......|+|||||..|
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAG 113 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAG 113 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCC
Confidence 36788999999999999999999999999999998999999999999999999999999999999999999999999999
Q ss_pred chHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcc
Q 002063 757 NLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVS 836 (973)
Q Consensus 757 sL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 836 (973)
+..+.++.+ +..+.+.++..+....+.||+||| ...-+|||||+.|||+..+|.+|++|||.+...... -.
T Consensus 114 SiSDI~R~R----~K~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT--MA 184 (502)
T KOG0574|consen 114 SISDIMRAR----RKPLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT--MA 184 (502)
T ss_pred cHHHHHHHh----cCCccHHHHHHHHHHHHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccccchhhhh--HH
Confidence 999999864 557889999999999999999999 677899999999999999999999999998755321 12
Q ss_pred cccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccCh
Q 002063 837 DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASE 916 (973)
Q Consensus 837 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (973)
......||+.|||||++..-.|..++||||+|++..||..|+.||.+... .+....-...+.....
T Consensus 185 KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHP--------------MRAIFMIPT~PPPTF~ 250 (502)
T KOG0574|consen 185 KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHP--------------MRAIFMIPTKPPPTFK 250 (502)
T ss_pred hhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccc--------------cceeEeccCCCCCCCC
Confidence 23356899999999999999999999999999999999999999976421 0000111111222234
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 917 SIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 917 ~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.+......+-++++.|+-+.|++|.|+.++++|-
T Consensus 251 KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~ 284 (502)
T KOG0574|consen 251 KPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHT 284 (502)
T ss_pred ChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhh
Confidence 4667788899999999999999999999998874
No 97
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=5.9e-36 Score=326.38 Aligned_cols=261 Identities=26% Similarity=0.384 Sum_probs=207.0
Q ss_pred cCCcccCeecccCcEEEEEEEEc-----CCCceEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLK-----KNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~-----~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
.+|.+.+.||+|+||+||++... .++..||+|.+... ...+.+.+|++++++++||||+++++++..++..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 46888999999999999999863 34567999987653 345678999999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhc--------CCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEE
Q 002063 749 VLEYMPNGNLFQALHKRVK--------EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKI 820 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~--------~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 820 (973)
||||+++++|.+++..... .....+++..+..++.|++.||+||| +.+++||||||+||++++++.++|
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH---~~~i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCcEEe
Confidence 9999999999999975421 12235899999999999999999999 789999999999999999999999
Q ss_pred ecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhh
Q 002063 821 ADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHL 899 (973)
Q Consensus 821 ~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~ 899 (973)
+|||++................++..|+|||++.+..++.++|||||||++|||++ |..||..... ........
T Consensus 162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~-----~~~~~~i~ 236 (288)
T cd05093 162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN-----NEVIECIT 236 (288)
T ss_pred ccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHH
Confidence 99999976543322222223345778999999998899999999999999999998 9999865421 11111111
Q ss_pred cccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 900 NNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
.... . .........+.+++.+||+.+|.+||++.++.+.|+++..
T Consensus 237 ~~~~--~---------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~ 281 (288)
T cd05093 237 QGRV--L---------QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK 281 (288)
T ss_pred cCCc--C---------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 1110 0 0011123468899999999999999999999999988764
No 98
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=6.5e-36 Score=325.36 Aligned_cols=259 Identities=24% Similarity=0.361 Sum_probs=204.2
Q ss_pred hcCCcccCeecccCcEEEEEEEEc----CCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLK----KNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~----~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
..+|++.+.||+|+||+||+|... ..+..||+|.+... .....+.+|++++++++||||+++++++..+...|
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 83 (283)
T cd05090 4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC 83 (283)
T ss_pred hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence 356788899999999999999863 34678999988652 23356889999999999999999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhc------------CCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCC
Q 002063 748 LVLEYMPNGNLFQALHKRVK------------EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED 815 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~------------~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~ 815 (973)
+||||+++|+|.+++..... .....+++..+..++.|++.|++||| +++++||||||+||+++++
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~nili~~~ 160 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS---SHFFVHKDLAARNILIGEQ 160 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hcCeehhccccceEEEcCC
Confidence 99999999999999864311 01234788899999999999999999 7899999999999999999
Q ss_pred CceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHH
Q 002063 816 YEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYW 894 (973)
Q Consensus 816 ~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~ 894 (973)
+.+|++|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||.... .......
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~--~~~~~~~ 238 (283)
T cd05090 161 LHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS--NQEVIEM 238 (283)
T ss_pred CcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC--HHHHHHH
Confidence 9999999999986643332222233445778999999988889999999999999999998 999986431 1111111
Q ss_pred HHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 895 VSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
+. ..... ........++.+++.+||+.||++||++.+|.++|..
T Consensus 239 ~~----~~~~~----------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 239 VR----KRQLL----------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HH----cCCcC----------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 11 11100 0111223567889999999999999999999999875
No 99
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=3.7e-36 Score=340.83 Aligned_cols=253 Identities=23% Similarity=0.278 Sum_probs=197.3
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
.|+..+.||+|+||+||+|++..+++.||||++... .....+.+|++++++++||||+++++++.+++..|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 578899999999999999999999999999998753 234567899999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 82 ~~~gg~L~~~l~~~-----~~~~e~~~~~~~~qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~ 153 (381)
T cd05626 82 YIPGGDMMSLLIRM-----EVFPEVLARFYIAELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRW 153 (381)
T ss_pred cCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEEeeCcCCccccc
Confidence 99999999998753 34788888899999999999999 78999999999999999999999999999754311
Q ss_pred CCCc---------------------------------------------ccccccCcccccccccccccCCCCccchHHH
Q 002063 832 SPKV---------------------------------------------SDYSCFAGTHGYIAPELAYTCKVSEKSDVFS 866 (973)
Q Consensus 832 ~~~~---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws 866 (973)
.... ......+||+.|+|||++.+..++.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwS 233 (381)
T cd05626 154 THNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWS 233 (381)
T ss_pred ccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceee
Confidence 0000 0011246999999999999888999999999
Q ss_pred HHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHH--hcCCCCCCCCCHH
Q 002063 867 FGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVV--CTTKLPNLRPPMR 944 (973)
Q Consensus 867 lG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--cl~~dP~~Rpt~~ 944 (973)
+||++|||++|+.||..... ............. .. ..........+.+++.+ |+..+|..||++.
T Consensus 234 lG~il~elltG~~Pf~~~~~-----~~~~~~i~~~~~~-~~-------~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~ 300 (381)
T cd05626 234 VGVILFEMLVGQPPFLAPTP-----TETQLKVINWENT-LH-------IPPQVKLSPEAVDLITKLCCSAEERLGRNGAD 300 (381)
T ss_pred hhhHHHHHHhCCCCCcCCCH-----HHHHHHHHccccc-cC-------CCCCCCCCHHHHHHHHHHccCcccccCCCCHH
Confidence 99999999999999975421 1111111100000 00 00001123456667766 5566777799999
Q ss_pred HHHHHh
Q 002063 945 EVVKML 950 (973)
Q Consensus 945 evl~~L 950 (973)
++++|-
T Consensus 301 ~~l~hp 306 (381)
T cd05626 301 DIKAHP 306 (381)
T ss_pred HHhcCc
Confidence 999874
No 100
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=9.5e-36 Score=325.35 Aligned_cols=261 Identities=21% Similarity=0.261 Sum_probs=194.7
Q ss_pred CCcccCeecccCcEEEEEEEEcC-CCceEEEEEeecc----ccHHHHHHHHHHHHhc---CCCceeeEeEEEEe-----C
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKK-NAGTVAVKQLWKG----DGVKVFAAEMEILGKI---RHRNILKLYACLLK-----G 743 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~-~~~~vavK~~~~~----~~~~~~~~E~~~l~~l---~hpniv~l~~~~~~-----~ 743 (973)
+|++.+.||+|+||+||+|++.. .++.||||++... .....+.+|+++++.+ +||||+++++++.. +
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 68899999999999999999854 4678999987642 2234566788777765 69999999998852 4
Q ss_pred CeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecc
Q 002063 744 GSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADF 823 (973)
Q Consensus 744 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 823 (973)
...++||||++ ++|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~lH---~~~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKV---PEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEcCCCCEEEccc
Confidence 56899999995 6999998753 2345789999999999999999999 789999999999999999999999999
Q ss_pred cCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcc--
Q 002063 824 GVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNN-- 901 (973)
Q Consensus 824 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-- 901 (973)
|+++..... .......|++.|+|||++.+..++.++||||+||++|||++|+.||..... .+....+......
T Consensus 155 g~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~--~~~~~~i~~~~~~~~ 229 (290)
T cd07862 155 GLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD--VDQLGKILDVIGLPG 229 (290)
T ss_pred cceEeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCH--HHHHHHHHHHhCCCC
Confidence 999765433 122335689999999999888999999999999999999999999975421 1111111110000
Q ss_pred cccch-------hhccccc---cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 902 HENVL-------KVLDCEV---ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 902 ~~~~~-------~~~~~~~---~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
..... ..+.... ......+....+.+++.+|++.||++||++.|+++|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 230 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred hhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 00000 0000000 000011234567899999999999999999999865
No 101
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1e-35 Score=327.05 Aligned_cols=254 Identities=26% Similarity=0.316 Sum_probs=214.2
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcC-CCceeeEeEEEEeCCee
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIR-HRNILKLYACLLKGGSS 746 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~ 746 (973)
.....|++.+.||+|.||.||+++.+.+|+.+|+|.+.+. .....+.+|+++|+++. |||||.+.++|++...+
T Consensus 32 ~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~ 111 (382)
T KOG0032|consen 32 DIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSV 111 (382)
T ss_pred cccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeE
Confidence 3345788899999999999999999999999999998773 23468899999999998 99999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCC----CceEEec
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED----YEPKIAD 822 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~----~~~kl~D 822 (973)
++|||+++||.|++.+... .+++.....++.|++.|++||| +.+|+|||+||+|+|+... +.+|++|
T Consensus 112 ~lvmEL~~GGeLfd~i~~~------~~sE~da~~~~~~il~av~~lH---~~gvvHrDlKpEN~L~~~~~~~~~~ik~~D 182 (382)
T KOG0032|consen 112 YLVMELCEGGELFDRIVKK------HYSERDAAGIIRQILEAVKYLH---SLGVVHRDLKPENLLLASKDEGSGRIKLID 182 (382)
T ss_pred EEEEEecCCchHHHHHHHc------cCCHHHHHHHHHHHHHHHHHHH---hCCceeccCCHHHeeeccccCCCCcEEEee
Confidence 9999999999999999864 2888999999999999999999 8999999999999999643 5799999
Q ss_pred ccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccc
Q 002063 823 FGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH 902 (973)
Q Consensus 823 fgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~ 902 (973)
||++..... .......+||+.|+|||++....|+..+||||+||++|.|++|..||....... ... .....
T Consensus 183 FGla~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~----~~~--~i~~~ 253 (382)
T KOG0032|consen 183 FGLAKFIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFE----IFL--AILRG 253 (382)
T ss_pred CCCceEccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhH----HHH--HHHcC
Confidence 999998765 234455789999999999999999999999999999999999999998652111 111 00011
Q ss_pred ccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 903 ENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
+..+..+.+........+++..|+..||.+|+|+.++++|.+
T Consensus 254 -------~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpW 295 (382)
T KOG0032|consen 254 -------DFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPW 295 (382)
T ss_pred -------CCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCcc
Confidence 012334445566777889999999999999999999999854
No 102
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-37 Score=329.58 Aligned_cols=246 Identities=30% Similarity=0.437 Sum_probs=206.3
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeec-----cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~-----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
.|.-.+.||+|+||.||-|++..+.+.||||+... .+...++..|+.++++++|||++.+.+||-.+...|+|||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 45667889999999999999999999999999865 2345678999999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|| -|+-.|.+.-+ ..++....+..|..+.++||+||| +++.||||||+.|||+++.|.||++|||.|....+
T Consensus 107 YC-lGSAsDlleVh----kKplqEvEIAAi~~gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P 178 (948)
T KOG0577|consen 107 YC-LGSASDLLEVH----KKPLQEVEIAAITHGALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP 178 (948)
T ss_pred HH-hccHHHHHHHH----hccchHHHHHHHHHHHHHHHHHHH---HhhHHhhhccccceEecCCCeeeeccccchhhcCc
Confidence 99 56888888755 346788899999999999999999 88999999999999999999999999999976654
Q ss_pred CCCcccccccCcccccccccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhh
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAY---TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
. ..++||+.|||||++. .+.|+-++||||+|++..|+...++|+-.. ...+- ++.+
T Consensus 179 A------nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnM--NAMSA-------------LYHI 237 (948)
T KOG0577|consen 179 A------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM--NAMSA-------------LYHI 237 (948)
T ss_pred h------hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCc--hHHHH-------------HHHH
Confidence 3 2478999999999984 568999999999999999999999998543 11111 1222
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
...+.......+....+..|+..|+++-|.+|||..++++|--
T Consensus 238 AQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~f 280 (948)
T KOG0577|consen 238 AQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRF 280 (948)
T ss_pred HhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcch
Confidence 2222222335577788999999999999999999999988754
No 103
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=6.7e-36 Score=337.51 Aligned_cols=261 Identities=25% Similarity=0.381 Sum_probs=203.9
Q ss_pred hcCCcccCeecccCcEEEEEEEEc-----CCCceEEEEEeeccc---cHHHHHHHHHHHHhcC-CCceeeEeEEEEeCCe
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLK-----KNAGTVAVKQLWKGD---GVKVFAAEMEILGKIR-HRNILKLYACLLKGGS 745 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~-----~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~ 745 (973)
.++|.+.+.||+|+||.||+|++. ..++.||||++.... ..+.+.+|++++.++. ||||+++++++..++.
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~ 115 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGP 115 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCC
Confidence 446788899999999999999964 335689999987532 2346889999999997 9999999999999999
Q ss_pred eEEEEEccCCCchHHHHHhhhc----------------------------------------------------------
Q 002063 746 SFLVLEYMPNGNLFQALHKRVK---------------------------------------------------------- 767 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 767 (973)
.++||||+++|+|.++++....
T Consensus 116 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (401)
T cd05107 116 IYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDM 195 (401)
T ss_pred cEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcc
Confidence 9999999999999999975321
Q ss_pred -----------------------------------CCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeee
Q 002063 768 -----------------------------------EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL 812 (973)
Q Consensus 768 -----------------------------------~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill 812 (973)
.....+++..+..++.|++.|++||| +.+++||||||+||++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrdlkp~NiLl 272 (401)
T cd05107 196 KGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA---SKNCVHRDLAARNVLI 272 (401)
T ss_pred hhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCcCcccCCcceEEE
Confidence 01124677888999999999999999 7899999999999999
Q ss_pred cCCCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccH
Q 002063 813 DEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDI 891 (973)
Q Consensus 813 ~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~ 891 (973)
++++.+|++|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 273 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~---- 348 (401)
T cd05107 273 CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN---- 348 (401)
T ss_pred eCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch----
Confidence 9999999999999976533222112223456789999999988889999999999999999998 88998643211
Q ss_pred HHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 892 VYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
........... ....+......+.+++.+||+.+|++||+++||++.|+++
T Consensus 349 -~~~~~~~~~~~----------~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 349 -EQFYNAIKRGY----------RMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred -HHHHHHHHcCC----------CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 11111111110 0001112345688999999999999999999999999875
No 104
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=3.2e-36 Score=339.27 Aligned_cols=254 Identities=23% Similarity=0.288 Sum_probs=202.5
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
..++|++.+.||+|+||+||+|++..+++.||+|++.+. ...+.+.+|+.+++.++||||+++++++.++...|+
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 346789999999999999999999999999999998652 234457789999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++... .++...+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||++..
T Consensus 121 v~Ey~~gg~L~~~l~~~------~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~ 191 (370)
T cd05596 121 VMEYMPGGDLVNLMSNY------DIPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 191 (370)
T ss_pred EEcCCCCCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCEEEEeccceee
Confidence 99999999999998753 3677778889999999999999 78999999999999999999999999999976
Q ss_pred ccCCCCcccccccCcccccccccccccC----CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccccc
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTC----KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||.... ..............
T Consensus 192 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~-----~~~~~~~i~~~~~~ 265 (370)
T cd05596 192 MDANGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS-----LVGTYSKIMDHKNS 265 (370)
T ss_pred ccCCCc-ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCC-----HHHHHHHHHcCCCc
Confidence 543221 112235689999999998653 47889999999999999999999997531 11111111111110
Q ss_pred chhhccccccChhhHHHHHHHHHHHHHhcCCCCCC--CCCHHHHHHHh
Q 002063 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNL--RPPMREVVKML 950 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rpt~~evl~~L 950 (973)
............+.+++.+|++.+|.+ ||++.|+++|-
T Consensus 266 --------~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~ 305 (370)
T cd05596 266 --------LTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHP 305 (370)
T ss_pred --------CCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCc
Confidence 000011123456788999999999998 99999998874
No 105
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=8.9e-36 Score=323.29 Aligned_cols=258 Identities=26% Similarity=0.360 Sum_probs=201.5
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCc----eEEEEEeeccc---cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAG----TVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~----~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
.+|++.+.||+|+||+||+|++..+++ .|++|.+.... ...++..|+..+++++||||+++++++. +...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence 467888999999999999999976665 47777765432 2356777888899999999999999875 456789
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
++||+++|+|.+++... ...+++..+..++.|++.|++|+| +++++||||||+||++++++.+||+|||+++.
T Consensus 86 i~e~~~~gsL~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~ 158 (279)
T cd05111 86 VTQLSPLGSLLDHVRQH----RDSLDPQRLLNWCVQIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVADL 158 (279)
T ss_pred EEEeCCCCcHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEEcCCcccee
Confidence 99999999999999753 235889999999999999999999 78999999999999999999999999999986
Q ss_pred ccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
..............++..|+|||++.+..++.++|||||||++||+++ |+.||..... ...... .......
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~--~~~~~~----~~~~~~~-- 230 (279)
T cd05111 159 LYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP--HEVPDL----LEKGERL-- 230 (279)
T ss_pred ccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHH----HHCCCcC--
Confidence 643332222233456789999999988899999999999999999998 9999965421 111111 1111100
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCC
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCT 957 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 957 (973)
..+. .....+.+++.+||..+|++||++.|+++.|..+.+.+
T Consensus 231 -~~~~-------~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~ 272 (279)
T cd05111 231 -AQPQ-------ICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDP 272 (279)
T ss_pred -CCCC-------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence 0011 12235678899999999999999999999998866533
No 106
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=6.4e-36 Score=336.79 Aligned_cols=201 Identities=27% Similarity=0.399 Sum_probs=175.4
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
++|++.+.||+|+||+||+|++..+++.||||++.+. .....+.+|+.++.+++||+|+++++++.++...|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 3688999999999999999999999999999998752 23356788999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++...
T Consensus 81 E~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~ 152 (363)
T cd05628 81 EFLPGGDMMTLLMKK-----DTLTEEETQFYIAETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLK 152 (363)
T ss_pred cCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEEEeeccCccccc
Confidence 999999999999753 35788999999999999999999 8899999999999999999999999999987543
Q ss_pred CCCCc---------------------------------ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhC
Q 002063 831 NSPKV---------------------------------SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTG 877 (973)
Q Consensus 831 ~~~~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g 877 (973)
..... .......||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G 232 (363)
T cd05628 153 KAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG 232 (363)
T ss_pred ccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhC
Confidence 21100 001134699999999999999999999999999999999999
Q ss_pred CCCCCcc
Q 002063 878 RKPVEEE 884 (973)
Q Consensus 878 ~~pf~~~ 884 (973)
+.||...
T Consensus 233 ~~Pf~~~ 239 (363)
T cd05628 233 YPPFCSE 239 (363)
T ss_pred CCCCCCC
Confidence 9999653
No 107
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=7.9e-36 Score=325.91 Aligned_cols=262 Identities=27% Similarity=0.373 Sum_probs=208.2
Q ss_pred cCCcccCeecccCcEEEEEEEEcC-----CCceEEEEEeeccc--cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKK-----NAGTVAVKQLWKGD--GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~-----~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
.+|.+.+.||+|+||.||+|+... ++..|++|.+.... ..+.+.+|++++++++||||+++++++..++..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 467888999999999999998642 35569999876533 34568899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhc-----------CCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCc
Q 002063 749 VLEYMPNGNLFQALHKRVK-----------EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE 817 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~-----------~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 817 (973)
||||+++++|.+++..+.. .....+++..+..++.|++.|++||| +++++||||||+||+++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCc
Confidence 9999999999999976421 12235789999999999999999999 789999999999999999999
Q ss_pred eEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHH
Q 002063 818 PKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVS 896 (973)
Q Consensus 818 ~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~ 896 (973)
++|+|||++................++..|+|||++.+..++.++|||||||++|||++ |+.||..... .....
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-----~~~~~ 236 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN-----TEVIE 236 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHH
Confidence 99999999976543322222233456788999999998899999999999999999999 9999865321 11111
Q ss_pred HhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCC
Q 002063 897 THLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPC 956 (973)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 956 (973)
...... . .......+..+.+++.+||+.+|++||++.+|+++|+++...
T Consensus 237 ~~~~~~--~---------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 237 CITQGR--V---------LERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred HHhCCC--C---------CCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 111100 0 011112345688999999999999999999999999988553
No 108
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=5.8e-36 Score=327.56 Aligned_cols=261 Identities=28% Similarity=0.372 Sum_probs=206.6
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCC-----CceEEEEEeecc---ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCe
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKN-----AGTVAVKQLWKG---DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGS 745 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~-----~~~vavK~~~~~---~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~ 745 (973)
..+|++.+.||+|+||.||+|..... ...||+|.+... ....++.+|+++++++ +||||+++++++..++.
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 90 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGP 90 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCC
Confidence 35688899999999999999998643 368999988653 2345678899999999 89999999999999999
Q ss_pred eEEEEEccCCCchHHHHHhhhc-----------CCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC
Q 002063 746 SFLVLEYMPNGNLFQALHKRVK-----------EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE 814 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~-----------~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~ 814 (973)
.++||||+++|+|.++++.... .....+++..+..++.|++.|++||| +.+++||||||+||+++.
T Consensus 91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~Nil~~~ 167 (293)
T cd05053 91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA---SKKCIHRDLAARNVLVTE 167 (293)
T ss_pred eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCccccccceeeEEEcC
Confidence 9999999999999999975321 23446889999999999999999999 789999999999999999
Q ss_pred CCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHH
Q 002063 815 DYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVY 893 (973)
Q Consensus 815 ~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~ 893 (973)
++.+|++|||+++...............++..|+|||++.+..++.++|||||||++||+++ |..||.... ...
T Consensus 168 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----~~~ 242 (293)
T cd05053 168 DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP-----VEE 242 (293)
T ss_pred CCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCC-----HHH
Confidence 99999999999987654332222222345678999999988899999999999999999998 999986431 111
Q ss_pred HHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 894 WVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
...... ... ....+......+.+++.+|++++|++|||+.|+++.|+.+.
T Consensus 243 ~~~~~~-~~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 243 LFKLLK-EGY----------RMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHHHH-cCC----------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 111111 100 00111223456889999999999999999999999998753
No 109
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=9.1e-36 Score=325.36 Aligned_cols=259 Identities=25% Similarity=0.376 Sum_probs=203.9
Q ss_pred CCcccCeecccCcEEEEEEEEcC-----CCceEEEEEeeccc---cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKK-----NAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~-----~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
+|++.+.||+|+||+||+|+... ....||+|.+.... ...++.+|+++++.++||||+++++++..++..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 46788999999999999998753 23578999876532 34568899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhc-------------------CCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCC
Q 002063 749 VLEYMPNGNLFQALHKRVK-------------------EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSN 809 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~-------------------~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~N 809 (973)
||||+++|+|.+++..... .....+++..+..++.|++.|++||| +.+++||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA---EMKLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH---HCCeehhhhhhhe
Confidence 9999999999999875321 11234788999999999999999999 7899999999999
Q ss_pred eeecCCCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCC
Q 002063 810 ILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDG 888 (973)
Q Consensus 810 ill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~ 888 (973)
|++++++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||.... .
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~ 235 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA--P 235 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC--H
Confidence 9999999999999999876543322222222345678999999988889999999999999999998 999996431 1
Q ss_pred ccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 889 KDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
..+..... .. .....+......+.+++.+|++.+|++||++.++++.|+++.
T Consensus 236 ~~~~~~~~----~~----------~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~ 287 (290)
T cd05045 236 ERLFNLLK----TG----------YRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM 287 (290)
T ss_pred HHHHHHHh----CC----------CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence 11111111 10 001111223456889999999999999999999999998764
No 110
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=9.4e-36 Score=330.20 Aligned_cols=245 Identities=27% Similarity=0.377 Sum_probs=195.9
Q ss_pred CcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHH---HhcCCCceeeEeEEEEeCCeeEEE
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEIL---GKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l---~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
|++.+.||+|+||+||+|.+..+++.||||++.+. ...+.+.+|++++ +.++||||+++++++..++..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 57788999999999999999999999999998753 2334566676655 566899999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++|+|..+++. ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++...
T Consensus 81 ~E~~~~~~L~~~~~~------~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~ 151 (324)
T cd05589 81 MEYAAGGDLMMHIHT------DVFSEPRAVFYAACVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEG 151 (324)
T ss_pred EcCCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCcEEeCcccCCccC
Confidence 999999999888753 25889999999999999999999 789999999999999999999999999998643
Q ss_pred cCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhc
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
.... .......|++.|+|||++.+..++.++|||||||++|||++|+.||.... .............
T Consensus 152 ~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~-----~~~~~~~i~~~~~------ 218 (324)
T cd05589 152 MGFG--DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDD-----EEEVFDSIVNDEV------ 218 (324)
T ss_pred CCCC--CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCC------
Confidence 2211 12234568999999999999899999999999999999999999997541 1111111111111
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHh
Q 002063 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRP-----PMREVVKML 950 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~L 950 (973)
..+......+.+++.+|++.||.+|| ++.+++++-
T Consensus 219 ------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~ 258 (324)
T cd05589 219 ------RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQP 258 (324)
T ss_pred ------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCC
Confidence 01112345578899999999999999 577777753
No 111
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2.9e-35 Score=317.39 Aligned_cols=260 Identities=21% Similarity=0.327 Sum_probs=211.2
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec-----cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~-----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
++|++.+.||+|+||.||+|....+++.||+|.++. ....+.+.+|++++++++|++++++++++..++..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 578999999999999999999998899999998753 223567889999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++|+|.+++... ......+++..+..++.|++.|++||| +.+++||||+|+||+++.++.++++|||.+....
T Consensus 82 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~ 157 (267)
T cd08224 82 ELADAGDLSRMIKHF-KKQKRLIPERTIWKYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred ecCCCCCHHHHHHHh-cccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecCCcChhhEEECCCCcEEEeccceeeecc
Confidence 999999999998753 223445789999999999999999999 7899999999999999999999999999987554
Q ss_pred CCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcc
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
.... ......++..|+|||++.+..++.++||||+||++|+|++|+.||.... .+..........
T Consensus 158 ~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~---------- 222 (267)
T cd08224 158 SKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLYSLCKKIEK---------- 222 (267)
T ss_pred CCCc--ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC---ccHHHHHhhhhc----------
Confidence 3221 1123457889999999998889999999999999999999999996542 122222111111
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
..............+.+++.+||+++|++||++.+|+++++++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 223 CDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred CCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 00111111234456889999999999999999999999998875
No 112
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.7e-35 Score=320.57 Aligned_cols=246 Identities=28% Similarity=0.329 Sum_probs=194.8
Q ss_pred ecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCCch
Q 002063 684 IGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNGNL 758 (973)
Q Consensus 684 lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL 758 (973)
||+|+||+||+++.+.+++.||+|++... .....+..|++++++++||||+++++++..+...|+||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 69999999999999999999999988642 1233456799999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcccc
Q 002063 759 FQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDY 838 (973)
Q Consensus 759 ~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 838 (973)
.+++... ....+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|+|||++....... ..
T Consensus 81 ~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---~~ 151 (277)
T cd05607 81 KYHIYNV---GERGLEMERVIHYSAQITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---TI 151 (277)
T ss_pred HHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc---ee
Confidence 9888643 2334788899999999999999999 7899999999999999999999999999987654322 12
Q ss_pred cccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhh
Q 002063 839 SCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESI 918 (973)
Q Consensus 839 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (973)
....|+..|+|||++.+..++.++||||+||++|||++|+.||....... ............. .. ...
T Consensus 152 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~----------~~-~~~ 219 (277)
T cd05607 152 TQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV-AKEELKRRTLEDE----------VK-FEH 219 (277)
T ss_pred eccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh-hHHHHHHHhhccc----------cc-ccc
Confidence 23468899999999998889999999999999999999999997532111 1111111111110 00 001
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 919 KEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 919 ~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.....++.+++.+||+.||++||+++|+++.+
T Consensus 220 ~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 220 QNFTEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred ccCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 12345678999999999999999996655433
No 113
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=6.4e-36 Score=336.24 Aligned_cols=254 Identities=22% Similarity=0.299 Sum_probs=200.4
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
...+|++.+.||+|+||.||+|++..+++.||+|++.+. ...+.+.+|+.+++.++||||+++++++..++..|+
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 346789999999999999999999999999999998652 234557889999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++... .++...+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++..
T Consensus 121 v~Ey~~gg~L~~~l~~~------~~~~~~~~~~~~qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~ 191 (370)
T cd05621 121 VMEYMPGGDLVNLMSNY------DVPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMK 191 (370)
T ss_pred EEcCCCCCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEEeccccee
Confidence 99999999999998643 3677888899999999999999 78999999999999999999999999999986
Q ss_pred ccCCCCcccccccCcccccccccccccC----CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccccc
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTC----KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||.... ..............
T Consensus 192 ~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~-----~~~~~~~i~~~~~~ 265 (370)
T cd05621 192 MDETGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS-----LVGTYSKIMDHKNS 265 (370)
T ss_pred cccCCc-eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCcc
Confidence 643221 112345699999999998654 37889999999999999999999996531 11111111111110
Q ss_pred chhhccccccChhhHHHHHHHHHHHHHhcCCCCCC--CCCHHHHHHHh
Q 002063 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNL--RPPMREVVKML 950 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rpt~~evl~~L 950 (973)
............+.+++..|++.+|.+ |+++.|+++|-
T Consensus 266 --------~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp 305 (370)
T cd05621 266 --------LNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHP 305 (370)
T ss_pred --------cCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCc
Confidence 000111123455677888898755544 89999999984
No 114
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.2e-35 Score=351.88 Aligned_cols=261 Identities=25% Similarity=0.298 Sum_probs=204.1
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
++|++.+.||+|+||+||+|++..+++.||||++... ...+++.+|++++++++||||+++++++.+++..|+||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 5799999999999999999999999999999998652 23456889999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCC------CCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEeccc
Q 002063 751 EYMPNGNLFQALHKRVKEG------KPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFG 824 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~------~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 824 (973)
||++||+|.+++....... ....++..+..++.|+++||+||| +.+|+||||||+||+++.++.++|+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH---HCCccccCCchheEEEcCCCCEEEEecC
Confidence 9999999999997532111 223567788899999999999999 7899999999999999999999999999
Q ss_pred CCccccCCCC----------------cccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCC
Q 002063 825 VAKIAENSPK----------------VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDG 888 (973)
Q Consensus 825 l~~~~~~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~ 888 (973)
+++....... ........||+.|+|||++.+..++.++||||+||++|||++|+.||.....
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~-- 236 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKG-- 236 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcch--
Confidence 9986521110 0011124689999999999999999999999999999999999999975321
Q ss_pred ccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCC-CHHHHHHHhhcC
Q 002063 889 KDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRP-PMREVVKMLADA 953 (973)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-t~~evl~~L~~~ 953 (973)
..... ...... +.. .....+.+..+.+++.+|++.||++|| +++++.+.|+..
T Consensus 237 ~ki~~--~~~i~~---------P~~-~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~ 290 (932)
T PRK13184 237 RKISY--RDVILS---------PIE-VAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPH 290 (932)
T ss_pred hhhhh--hhhccC---------hhh-ccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11110 000000 000 001123345678899999999999996 566677766654
No 115
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.3e-35 Score=327.47 Aligned_cols=240 Identities=30% Similarity=0.398 Sum_probs=191.4
Q ss_pred CeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
+.||+|+||+||+|++..+++.||||++... ...+.+..|..++... +||||+++++++..++..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4689999999999999998999999998753 2334456677777654 899999999999999999999999999
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
|+|.+++... ..++...+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++.......
T Consensus 81 g~L~~~~~~~-----~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-- 150 (316)
T cd05592 81 GDLMFHIQSS-----GRFDEARARFYAAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-- 150 (316)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--
Confidence 9999988753 35788889999999999999999 7899999999999999999999999999987543222
Q ss_pred ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccC
Q 002063 836 SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVAS 915 (973)
Q Consensus 836 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..............
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~-----~~~~~~~i~~~~~~----------- 214 (316)
T cd05592 151 GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGED-----EDELFDSILNDRPH----------- 214 (316)
T ss_pred CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHcCCCC-----------
Confidence 12233568999999999998899999999999999999999999997531 11121111111110
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCHH-HHHH
Q 002063 916 ESIKEDMIKLLKIAVVCTTKLPNLRPPMR-EVVK 948 (973)
Q Consensus 916 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~-evl~ 948 (973)
.+......+.+++.+||+.||++||++. ++++
T Consensus 215 -~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 215 -FPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred -CCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 1112234577899999999999999875 5544
No 116
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.8e-35 Score=324.17 Aligned_cols=266 Identities=26% Similarity=0.333 Sum_probs=205.9
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCC----------------ceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceee
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNA----------------GTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILK 735 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~----------------~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~ 735 (973)
..+|++.+.||+|+||.||+|+....+ ..||+|++... ...+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 357899999999999999999876533 45899988753 24567889999999999999999
Q ss_pred EeEEEEeCCeeEEEEEccCCCchHHHHHhhhcCC------CCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCC
Q 002063 736 LYACLLKGGSSFLVLEYMPNGNLFQALHKRVKEG------KPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSN 809 (973)
Q Consensus 736 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~------~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~N 809 (973)
+++++..++..++||||+++++|.+++....... ...+++..++.++.|++.||+||| +.+++||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH---~~~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE---SLNFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH---HcCccccccchhc
Confidence 9999999999999999999999999998653211 236899999999999999999999 7899999999999
Q ss_pred eeecCCCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh--CCCCCCcccCC
Q 002063 810 ILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT--GRKPVEEEYGD 887 (973)
Q Consensus 810 ill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~--g~~pf~~~~~~ 887 (973)
|+++.++.++++|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~-- 238 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT-- 238 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC--
Confidence 9999999999999999876543322222223456788999999988889999999999999999998 677875431
Q ss_pred CccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 888 GKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
................ .............++.+++.+|++.||++||++.|+++.|++
T Consensus 239 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 239 DQQVIENAGHFFRDDG-------RQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred hHHHHHHHHhcccccc-------ccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 1111111111100000 000011112233568999999999999999999999999864
No 117
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.4e-35 Score=319.96 Aligned_cols=260 Identities=21% Similarity=0.322 Sum_probs=210.2
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
++|++.+.||+|+||.||+|+...+++.||||.+... ...+++.+|+++++.++||||+++++++..++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4788899999999999999999888999999987542 23457888999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++++|.+++.... .....+++..+..++.|++.|++||| +++++|+||||+||+++.++.++++|||.+....
T Consensus 82 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd08229 82 ELADAGDLSRMIKHFK-KQKRLIPEKTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCCHHHHHHHhh-ccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEECcchhhhccc
Confidence 9999999999987542 23456889999999999999999999 7899999999999999999999999999987654
Q ss_pred CCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcc
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
.... ......|+..|+|||++.+..++.++||||+|+++|+|++|..||.....+ ..........
T Consensus 158 ~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~---------- 222 (267)
T cd08229 158 SKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSLCKKIEQ---------- 222 (267)
T ss_pred cCCc--ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch---HHHHhhhhhc----------
Confidence 3221 122345888999999998888999999999999999999999999653211 1111111110
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
..............+.+++.+||+.+|++|||+.+|++.++++.
T Consensus 223 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 223 CDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred CCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 00111111234557889999999999999999999999998763
No 118
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.7e-35 Score=318.00 Aligned_cols=255 Identities=29% Similarity=0.364 Sum_probs=204.7
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.++|++.+.||+|++|.||+|.+.. ++.||||.+... ...+.+.+|++++++++||||+++++++..++..|+||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNN-TTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecC-CeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 3468889999999999999999765 578999988653 34567889999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++++|.+++... ....+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|+|||++.......
T Consensus 84 ~~~~L~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05068 84 KYGSLLEYLQGG---AGRALKLPQLIDMAAQVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDI 157 (261)
T ss_pred cCCcHHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCc
Confidence 999999999753 2345789999999999999999999 7899999999999999999999999999998765321
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
.. .......+..|+|||++.+..++.++||||||+++|||++ |+.||.... .............
T Consensus 158 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-----~~~~~~~~~~~~~--------- 222 (261)
T cd05068 158 YE-AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMT-----NAEVLQQVDQGYR--------- 222 (261)
T ss_pred cc-ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHHHHcCCC---------
Confidence 11 1111223468999999998899999999999999999999 999996531 1111111111100
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
..........+.+++.+|++.+|++||++.++++.|++.
T Consensus 223 --~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 223 --MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred --CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 001112345688999999999999999999999999863
No 119
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=6.7e-36 Score=321.20 Aligned_cols=255 Identities=28% Similarity=0.361 Sum_probs=207.6
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc--cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD--GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
...+|++.+.||.|+||+||+|++.. ++.||+|++.... ....+.+|+++++.++||||+++++++..++..++|||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE 82 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence 34578899999999999999999988 8899999987643 35678899999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|+++|+|.+++... ....+++..+..++.|++.|++||| +++++||||+|+||++++++.+||+|||.+.....
T Consensus 83 ~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~ 156 (261)
T cd05148 83 LMEKGSLLAFLRSP---EGQVLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKE 156 (261)
T ss_pred ecccCCHHHHHhcC---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEccccchhhcCC
Confidence 99999999999753 2345789999999999999999999 78999999999999999999999999999876543
Q ss_pred CCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhcc
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
... ......++..|+|||++.+..++.++||||||+++|+|++ |+.||.... .............
T Consensus 157 ~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~-----~~~~~~~~~~~~~------- 222 (261)
T cd05148 157 DVY--LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN-----NHEVYDQITAGYR------- 222 (261)
T ss_pred ccc--cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC-----HHHHHHHHHhCCc-------
Confidence 211 1112345778999999988889999999999999999998 899996532 1111111111100
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
..........+.+++.+|++.||++|||++++++.|+.+
T Consensus 223 ----~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 223 ----MPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred ----CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 011123345688999999999999999999999999763
No 120
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.9e-35 Score=319.96 Aligned_cols=257 Identities=24% Similarity=0.334 Sum_probs=202.0
Q ss_pred CcccCeecccCcEEEEEEEEcCC---CceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCe-----
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKKN---AGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGS----- 745 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~~---~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~----- 745 (973)
|++.+.||+|+||.||+|....+ +..||||++..+ .....+.+|++.++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 56788999999999999998653 378999988653 234568899999999999999999998866544
Q ss_pred -eEEEEEccCCCchHHHHHhhhc-CCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecc
Q 002063 746 -SFLVLEYMPNGNLFQALHKRVK-EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADF 823 (973)
Q Consensus 746 -~~lv~e~~~~gsL~~~l~~~~~-~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 823 (973)
.++||||+++|+|..++..... .....+++..+..++.|++.||+|+| +.+++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchheEEECCCCeEEECCc
Confidence 7999999999999999865422 22346889999999999999999999 789999999999999999999999999
Q ss_pred cCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhccc
Q 002063 824 GVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNH 902 (973)
Q Consensus 824 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~ 902 (973)
|+++...............++..|+|||++.+..++.++|||||||++|||++ |..||.... ... .........
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~--~~~---~~~~~~~~~ 232 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVE--NHE---IYDYLRHGN 232 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC--HHH---HHHHHHcCC
Confidence 99986654332222222335678999999988889999999999999999999 889986431 111 111111110
Q ss_pred ccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 903 ENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
. ...+......+.+++.+|++.||++||++.|++++|+++
T Consensus 233 ~-----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 233 R-----------LKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred C-----------CCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0 011123345688999999999999999999999999875
No 121
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=5.3e-36 Score=332.32 Aligned_cols=242 Identities=26% Similarity=0.315 Sum_probs=196.0
Q ss_pred CeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCC
Q 002063 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNG 756 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 756 (973)
+.||+|+||+||+|++..+++.||+|++... .....+.+|+++++.++||||+++++++..++..|+||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4689999999999999999999999998753 23456678999999999999999999999999999999999999
Q ss_pred chHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcc
Q 002063 757 NLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVS 836 (973)
Q Consensus 757 sL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 836 (973)
+|.+++... ..+++..+..++.|++.||+|||+ ..+|+||||||+||+++.++.+||+|||+++...... .
T Consensus 81 ~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH~--~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~--~ 151 (325)
T cd05594 81 ELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG--A 151 (325)
T ss_pred cHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC--c
Confidence 999888643 357899999999999999999993 2699999999999999999999999999987532221 1
Q ss_pred cccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccCh
Q 002063 837 DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASE 916 (973)
Q Consensus 837 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (973)
......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..............
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~-----~~~~~~~i~~~~~~------------ 214 (325)
T cd05594 152 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HEKLFELILMEEIR------------ 214 (325)
T ss_pred ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCC-----HHHHHHHHhcCCCC------------
Confidence 1223468999999999999999999999999999999999999996531 11111111111100
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 002063 917 SIKEDMIKLLKIAVVCTTKLPNLRP-----PMREVVKM 949 (973)
Q Consensus 917 ~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 949 (973)
.+......+.+++.+|++.||++|+ ++.++++|
T Consensus 215 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 215 FPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 0112244678899999999999996 89999876
No 122
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=8.5e-36 Score=336.60 Aligned_cols=253 Identities=24% Similarity=0.307 Sum_probs=200.5
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
++|++.+.||+|+||+||+|++..+++.||||++... .....+.+|+++++.++||||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 3688999999999999999999999999999998753 23345778999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++|+|||++....
T Consensus 81 E~~~~g~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 152 (364)
T cd05599 81 EYLPGGDMMTLLMKK-----DTFTEEETRFYIAETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLK 152 (364)
T ss_pred CCCCCcHHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEeecccceecc
Confidence 999999999998753 35788999999999999999999 7899999999999999999999999999987543
Q ss_pred CCCCcc------------------------------------cccccCcccccccccccccCCCCccchHHHHHHHHHHH
Q 002063 831 NSPKVS------------------------------------DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLEL 874 (973)
Q Consensus 831 ~~~~~~------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~el 874 (973)
...... .....+||+.|+|||++.+..++.++||||+||++|||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el 232 (364)
T cd05599 153 KSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEM 232 (364)
T ss_pred ccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHh
Confidence 211000 00123589999999999988999999999999999999
Q ss_pred HhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCC---HHHHHHHh
Q 002063 875 VTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPP---MREVVKML 950 (973)
Q Consensus 875 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt---~~evl~~L 950 (973)
++|..||.... ............... .. + ........+.+++.+|+. +|.+|++ +.+++++-
T Consensus 233 ~~G~~Pf~~~~-----~~~~~~~i~~~~~~~-~~--~-----~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~ 297 (364)
T cd05599 233 LVGYPPFCSDN-----PQETYRKIINWKETL-QF--P-----DEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHP 297 (364)
T ss_pred hcCCCCCCCCC-----HHHHHHHHHcCCCcc-CC--C-----CCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCC
Confidence 99999996531 111111111111100 00 0 001123456788888986 9999998 99988763
No 123
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=5.4e-36 Score=329.91 Aligned_cols=265 Identities=22% Similarity=0.253 Sum_probs=206.4
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc-cHHHHHHHHHHHHhcC-C-----CceeeEeEEEEeCCeeE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-GVKVFAAEMEILGKIR-H-----RNILKLYACLLKGGSSF 747 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~-h-----pniv~l~~~~~~~~~~~ 747 (973)
..+|++.+.||+|+||.|.+|.+..+++.||||+++... -..+...|+.+|..++ | -|+|+++++|....+.|
T Consensus 185 ~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlc 264 (586)
T KOG0667|consen 185 AYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLC 264 (586)
T ss_pred EEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccccee
Confidence 348999999999999999999999999999999998754 4456678999999996 4 38999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCC--CceEEecccC
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED--YEPKIADFGV 825 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~--~~~kl~Dfgl 825 (973)
||+|.+ .-+|+++++.+ ....++...+..++.||+.||.+|| +.+|||+||||+|||+.+. ..+||+|||.
T Consensus 265 iVfELL-~~NLYellK~n---~f~Glsl~~ir~~~~Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~~vKVIDFGS 337 (586)
T KOG0667|consen 265 IVFELL-STNLYELLKNN---KFRGLSLPLVRKFAQQILTALLFLH---ELGIIHCDLKPENILLKDPKRSRIKVIDFGS 337 (586)
T ss_pred eeehhh-hhhHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCChhheeeccCCcCceeEEeccc
Confidence 999999 56999999875 3445889999999999999999999 8899999999999999764 4699999999
Q ss_pred CccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHH-----------
Q 002063 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYW----------- 894 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~----------- 894 (973)
++....... ..+.+..|+|||++.|.+|+.+.||||||||++||++|...|.++. +...+...
T Consensus 338 Sc~~~q~vy-----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~n-e~DQl~~I~e~lG~Pp~~m 411 (586)
T KOG0667|consen 338 SCFESQRVY-----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDN-EYDQLARIIEVLGLPPPKM 411 (586)
T ss_pred ccccCCcce-----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCC-HHHHHHHHHHHhCCCCHHH
Confidence 987654432 2456789999999999999999999999999999999988886431 11111111
Q ss_pred HHHhhcccccchh----------------------------hcc----c----cccChhhHHHHHHHHHHHHHhcCCCCC
Q 002063 895 VSTHLNNHENVLK----------------------------VLD----C----EVASESIKEDMIKLLKIAVVCTTKLPN 938 (973)
Q Consensus 895 ~~~~~~~~~~~~~----------------------------~~~----~----~~~~~~~~~~~~~l~~l~~~cl~~dP~ 938 (973)
+............ ..+ + .............+.+++.+|+.+||.
T Consensus 412 L~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~ 491 (586)
T KOG0667|consen 412 LDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPA 491 (586)
T ss_pred HHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCch
Confidence 1000000000000 000 0 000111224456789999999999999
Q ss_pred CCCCHHHHHHHhhc
Q 002063 939 LRPPMREVVKMLAD 952 (973)
Q Consensus 939 ~Rpt~~evl~~L~~ 952 (973)
+|+|+.++++|-.-
T Consensus 492 ~R~tp~qal~Hpfl 505 (586)
T KOG0667|consen 492 ERITPAQALNHPFL 505 (586)
T ss_pred hcCCHHHHhcCccc
Confidence 99999999998653
No 124
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.2e-35 Score=328.28 Aligned_cols=241 Identities=30% Similarity=0.401 Sum_probs=194.8
Q ss_pred CeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
+.||+|+||+||+|+++.+++.||||++.+. ...+.+.+|..+++.. +||||+++++++...+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 4689999999999999999999999998752 3445667888888876 699999999999999999999999999
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
|+|.+++... ..+++..+..++.|++.||+||| +++++||||||+||+++.++.+||+|||++.......
T Consensus 81 g~L~~~i~~~-----~~l~~~~~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~-- 150 (320)
T cd05590 81 GDLMFHIQKS-----RRFDEARARFYAAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG-- 150 (320)
T ss_pred chHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC--
Confidence 9999988753 35788899999999999999999 7899999999999999999999999999987542221
Q ss_pred ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccC
Q 002063 836 SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVAS 915 (973)
Q Consensus 836 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..............
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~-----~~~~~~~i~~~~~~----------- 214 (320)
T cd05590 151 KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN-----EDDLFEAILNDEVV----------- 214 (320)
T ss_pred CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCC-----HHHHHHHHhcCCCC-----------
Confidence 12223568999999999998899999999999999999999999996531 11222222111110
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCH------HHHHHH
Q 002063 916 ESIKEDMIKLLKIAVVCTTKLPNLRPPM------REVVKM 949 (973)
Q Consensus 916 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~------~evl~~ 949 (973)
.+......+.+++.+|++.||.+||++ .++++|
T Consensus 215 -~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 215 -YPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred -CCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence 011123467889999999999999998 666665
No 125
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.5e-35 Score=321.77 Aligned_cols=259 Identities=24% Similarity=0.337 Sum_probs=204.3
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCc----eEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAG----TVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~----~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
..+|++.+.||+|+||+||+|++..+++ .||+|++... .....+.+|+.+++.++||||+++++++... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcE
Confidence 3567889999999999999999876665 4899987643 2345678899999999999999999988754 578
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
++|||+++|+|.+++... ...+++..+..++.|+++||+||| +++++||||||+||++++++.+||+|||+++
T Consensus 85 l~~~~~~~g~l~~~l~~~----~~~~~~~~~~~~~~qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~ 157 (279)
T cd05109 85 LVTQLMPYGCLLDYVREN----KDRIGSQDLLNWCVQIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (279)
T ss_pred EEEEcCCCCCHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCCCcee
Confidence 999999999999998753 345889999999999999999999 7899999999999999999999999999998
Q ss_pred cccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 828 IAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
...............++..|+|||...+..++.++|||||||++|||++ |..||+... ......++.. ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~~~~~~----~~~-- 229 (279)
T cd05109 158 LLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIP--AREIPDLLEK----GER-- 229 (279)
T ss_pred ecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHHC----CCc--
Confidence 6643322111122335678999999988889999999999999999998 999986531 1112222111 100
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCC
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCT 957 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 957 (973)
..........+.+++.+||+.||++||++.++++.++++...+
T Consensus 230 --------~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 230 --------LPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred --------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 0011123456788999999999999999999999998876544
No 126
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=9.7e-36 Score=331.59 Aligned_cols=252 Identities=24% Similarity=0.263 Sum_probs=198.5
Q ss_pred CCcccCeecccCcEEEEEEEEc---CCCceEEEEEeecc------ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCee
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLK---KNAGTVAVKQLWKG------DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSS 746 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~---~~~~~vavK~~~~~------~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 746 (973)
+|++.+.||+|+||+||+|+.. .+++.||+|++.+. ...+.+.+|+++++.+ +||+|+++++++..++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4788999999999999999874 46889999998652 2345577899999999 599999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||++
T Consensus 81 ~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~~~kl~DfG~~ 152 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR-----DNFSEDEVRFYSGEIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGLS 152 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHeEECCCCCEEEeeCcCC
Confidence 9999999999999998753 35788899999999999999999 789999999999999999999999999998
Q ss_pred ccccCCCCcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccc
Q 002063 827 KIAENSPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
+........ ......||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..............
T Consensus 153 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~~~~~~~~~~~~--- 227 (332)
T cd05614 153 KEFLSEEKE-RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGER-NTQSEVSRRILKCD--- 227 (332)
T ss_pred ccccccCCC-ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCC-CCHHHHHHHHhcCC---
Confidence 765332221 12235689999999998765 4788999999999999999999999753211 11111111111111
Q ss_pred hhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHh
Q 002063 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRP-----PMREVVKML 950 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~L 950 (973)
... +......+.+++.+|++.||++|| ++.+++++-
T Consensus 228 -----~~~----~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~ 268 (332)
T cd05614 228 -----PPF----PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHP 268 (332)
T ss_pred -----CCC----CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCC
Confidence 111 112344578899999999999999 777888763
No 127
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.7e-35 Score=324.72 Aligned_cols=258 Identities=26% Similarity=0.385 Sum_probs=203.8
Q ss_pred hcCCcccCeecccCcEEEEEEEEc-----CCCceEEEEEeecc---ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCe
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLK-----KNAGTVAVKQLWKG---DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGS 745 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~-----~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~ 745 (973)
.++|++.+.||+|+||.||+|... .++..||||++... ...+.+.+|+++++++ +||||+++++++...+.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 357889999999999999999852 34568999987653 2345688999999999 79999999999999999
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccC
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
.|+||||+++|+|.++++.. ....+++.++..++.|++.|++|+| +.+++|+||||+||+++.++.++++|||+
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~---~~~~l~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~dfg~ 187 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRK---RESFLTLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICDFGL 187 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeehhhhccceEEEcCCCeEEECCCcc
Confidence 99999999999999999753 1233789999999999999999999 78999999999999999999999999999
Q ss_pred CccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhccccc
Q 002063 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
+................++..|+|||++.+..++.++||||+||++|||++ |..||...... ......+. ...
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~-~~~~~~~~----~~~- 261 (302)
T cd05055 188 ARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD-SKFYKLIK----EGY- 261 (302)
T ss_pred cccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch-HHHHHHHH----cCC-
Confidence 876543322111222345778999999999999999999999999999998 99998654211 11111111 000
Q ss_pred chhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
..........++.+++.+|++++|++||++.|+++.|++.
T Consensus 262 ---------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 262 ---------RMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred ---------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 0001111234688999999999999999999999999864
No 128
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.8e-35 Score=327.87 Aligned_cols=246 Identities=27% Similarity=0.344 Sum_probs=197.7
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCC-CceeeEeEEEEeCCeeEEEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRH-RNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h-pniv~l~~~~~~~~~~~lv~ 750 (973)
+|++.+.||+|+||+||+|++..+++.||||++.+. ...+.+..|.+++..++| ++|+++++++..++..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 478899999999999999999998999999998752 344567789999999976 46888999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++....
T Consensus 81 E~~~~g~L~~~~~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05587 81 EYVNGGDLMYHIQQV-----GKFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENI 152 (324)
T ss_pred cCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEEeecCcceecC
Confidence 999999999988753 34788899999999999999999 7899999999999999999999999999986432
Q ss_pred CCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcc
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..............
T Consensus 153 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~-----~~~~~~~i~~~~~~------ 219 (324)
T cd05587 153 FGG--KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED-----EDELFQSIMEHNVS------ 219 (324)
T ss_pred CCC--CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC-----HHHHHHHHHcCCCC------
Confidence 221 12233568999999999999999999999999999999999999996531 11111111111110
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHH
Q 002063 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPM-----REVVKM 949 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~-----~evl~~ 949 (973)
.+......+.+++.+|++.||.+|++. .++.++
T Consensus 220 ------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 220 ------YPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred ------CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 111223467889999999999999976 666655
No 129
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.2e-35 Score=322.26 Aligned_cols=259 Identities=26% Similarity=0.367 Sum_probs=205.6
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCC-----CceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCee
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKN-----AGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSS 746 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~-----~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 746 (973)
.++|++.+.||+|+||.||+|..... +..||+|.+... .....+.+|+++++.++||||+++++++..+...
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 35788899999999999999998643 378999987653 2345678999999999999999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcC-----CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEe
Q 002063 747 FLVLEYMPNGNLFQALHKRVKE-----GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIA 821 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~-----~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 821 (973)
++||||+++|+|.+++...... ....+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA---AKKFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccChheEEEcCCCCEEEC
Confidence 9999999999999999754221 1234788899999999999999999 7899999999999999999999999
Q ss_pred cccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhc
Q 002063 822 DFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLN 900 (973)
Q Consensus 822 Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~ 900 (973)
|||+++...............++..|+|||.+.+..++.++|||||||++||+++ |..||... ..........
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~--~~~~~~~~~~---- 235 (277)
T cd05032 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGL--SNEEVLKFVI---- 235 (277)
T ss_pred CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccC--CHHHHHHHHh----
Confidence 9999876644332222233456789999999988889999999999999999998 99998643 1111111111
Q ss_pred ccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 901 NHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
... .. ..+......+.+++.+||+.+|++|||+.++++.|++
T Consensus 236 ~~~-~~---------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 236 DGG-HL---------DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred cCC-CC---------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 110 00 0111224568899999999999999999999998863
No 130
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.2e-35 Score=341.21 Aligned_cols=266 Identities=21% Similarity=0.250 Sum_probs=196.4
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEEEEeC--------Cee
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKG--------GSS 746 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--------~~~ 746 (973)
..+|++.+.||+|+||+||+|.+..+++.||||++.... ....+|+.+++.++||||+++++++... ...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~--~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 142 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP--QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFL 142 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc--chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEE
Confidence 457999999999999999999999889999999886533 2345799999999999999999887432 246
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCC-ceEEecccC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY-EPKIADFGV 825 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfgl 825 (973)
++||||++ +++.+++... ......+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||+
T Consensus 143 ~lvmE~~~-~~l~~~~~~~-~~~~~~l~~~~~~~~~~qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~vkL~DFGl 217 (440)
T PTZ00036 143 NVVMEFIP-QTVHKYMKHY-ARNNHALPLFLVKLYSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLCDFGS 217 (440)
T ss_pred EEEEecCC-ccHHHHHHHH-hhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCceeeecccc
Confidence 79999996 5788877653 223456889999999999999999999 78999999999999999665 699999999
Q ss_pred CccccCCCCcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhc----
Q 002063 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLN---- 900 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~---- 900 (973)
++....... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||..... ...+...+.....
T Consensus 218 a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~-~~~~~~i~~~~~~p~~~ 293 (440)
T PTZ00036 218 AKNLLAGQR---SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSS-VDQLVRIIQVLGTPTED 293 (440)
T ss_pred chhccCCCC---cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCCHH
Confidence 986643322 2234679999999998654 689999999999999999999999975421 1111111110000
Q ss_pred ----ccccchhhccccccC-----hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 901 ----NHENVLKVLDCEVAS-----ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 901 ----~~~~~~~~~~~~~~~-----~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
..+.+..+..+.... ..+.....++.+++.+||++||.+|||+.|+++|-.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~ 353 (440)
T PTZ00036 294 QLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPF 353 (440)
T ss_pred HHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChh
Confidence 000000000000000 011123356889999999999999999999997643
No 131
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=5.1e-36 Score=333.57 Aligned_cols=252 Identities=25% Similarity=0.303 Sum_probs=202.3
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
++|++.+.||+|+||+||+|+...+++.||||++... ...+.+.+|+.+++.++||||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 3688999999999999999999999999999998763 23456788999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 81 e~~~~~~L~~~l~~~----~~~l~~~~~~~~~~qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 153 (330)
T cd05601 81 EYQPGGDLLSLLNRY----EDQFDEDMAQFYLAELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFGSAARLT 153 (330)
T ss_pred CCCCCCCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEcccCchHheEECCCCCEEeccCCCCeECC
Confidence 999999999999764 235888899999999999999999 7899999999999999999999999999998664
Q ss_pred CCCCcccccccCcccccccccccc------cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccccc
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAY------TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
..... ......||+.|+|||++. +..++.++||||+||++|||++|+.||.... .............
T Consensus 154 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~-----~~~~~~~i~~~~~- 226 (330)
T cd05601 154 ANKMV-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT-----SAKTYNNIMNFQR- 226 (330)
T ss_pred CCCce-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCC-----HHHHHHHHHcCCC-
Confidence 33221 122346899999999986 4567889999999999999999999996531 1111111111111
Q ss_pred chhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.... .........+.+++..|++ +|.+||++.++++|
T Consensus 227 ~~~~-------~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 227 FLKF-------PEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred ccCC-------CCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 0000 0011234557788999997 99999999999976
No 132
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.8e-35 Score=316.62 Aligned_cols=251 Identities=24% Similarity=0.349 Sum_probs=200.8
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccC
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
.+|++.+.||+|+||+||+|++.. +..||||.+... ...+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 467888999999999999998865 456999987653 345678999999999999999999999998888999999999
Q ss_pred CCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCC
Q 002063 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~ 834 (973)
+|+|.+++... ...+++..+..++.|++.|++||| +.+++|+||||+||+++.++.+||+|||.++.......
T Consensus 83 ~~~l~~~i~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05113 83 NGCLLNYLREH----GKRFQPSQLLEMCKDVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY 155 (256)
T ss_pred CCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEECCCccceecCCCce
Confidence 99999998753 225789999999999999999999 78999999999999999999999999999876543221
Q ss_pred cccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhccccc
Q 002063 835 VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 835 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
.......++..|+|||+..+..++.++|||||||++|||++ |+.||.... ....... .......
T Consensus 156 -~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~--~~~~~~~---~~~~~~~--------- 220 (256)
T cd05113 156 -TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFN--NSETVEK---VSQGLRL--------- 220 (256)
T ss_pred -eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCC--HHHHHHH---HhcCCCC---------
Confidence 11112335678999999988889999999999999999998 999996532 1111111 1111000
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.........+.+++.+||+++|++||++.++++.++
T Consensus 221 --~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 221 --YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred --CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 001112456889999999999999999999998874
No 133
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.4e-35 Score=328.93 Aligned_cols=247 Identities=23% Similarity=0.358 Sum_probs=195.0
Q ss_pred CeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
+.||+|+||+||+|++..+++.||+|++.+. .....+.+|..++.++ +||||+++++++..++..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4699999999999999999999999998752 2344577888888776 899999999999999999999999999
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
|+|.+++... ..+++..+..++.|++.|++||| +++|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~L~~~~~~~-----~~l~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~- 151 (329)
T cd05618 81 GDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD- 151 (329)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC-
Confidence 9999888643 35788999999999999999999 78999999999999999999999999999875322111
Q ss_pred ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCC---CccHHHHHHHhhcccccchhhcccc
Q 002063 836 SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGD---GKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 836 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ......++........ .
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~-------~- 222 (329)
T cd05618 152 -TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-------I- 222 (329)
T ss_pred -ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC-------C-
Confidence 122356899999999999999999999999999999999999999642111 1111122111111110 0
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCC------HHHHHHH
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPP------MREVVKM 949 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt------~~evl~~ 949 (973)
..+......+.+++.+|++.||++||+ +.++++|
T Consensus 223 ---~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 223 ---RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred ---CCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 011223446778999999999999998 4677665
No 134
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=5.6e-36 Score=339.27 Aligned_cols=253 Identities=23% Similarity=0.279 Sum_probs=197.9
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
++|++.+.||+|+||+||+|+...+++.||||++.+. ...+.+.+|++++++++||||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 3688899999999999999999999999999988652 23456788999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 81 E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~ 152 (377)
T cd05629 81 EFLPGGDLMTMLIKY-----DTFSEDVTRFYMAECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFH 152 (377)
T ss_pred eCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEEeecccccccc
Confidence 999999999998753 34778888899999999999999 8899999999999999999999999999986332
Q ss_pred CCCCc------------c---------------------------------cccccCcccccccccccccCCCCccchHH
Q 002063 831 NSPKV------------S---------------------------------DYSCFAGTHGYIAPELAYTCKVSEKSDVF 865 (973)
Q Consensus 831 ~~~~~------------~---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvw 865 (973)
..... . ......||+.|+|||++.+..++.++|||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw 232 (377)
T cd05629 153 KQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWW 232 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeE
Confidence 11000 0 00124689999999999998999999999
Q ss_pred HHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCC---CC
Q 002063 866 SFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLR---PP 942 (973)
Q Consensus 866 slG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R---pt 942 (973)
|+||++|||++|+.||..... .............. .. +. .......+.+++.+|+. +|.+| ++
T Consensus 233 SlGvil~elltG~~Pf~~~~~-----~~~~~~i~~~~~~~-~~--p~-----~~~~s~~~~dli~~lL~-~~~~r~~r~~ 298 (377)
T cd05629 233 SLGAIMFECLIGWPPFCSENS-----HETYRKIINWRETL-YF--PD-----DIHLSVEAEDLIRRLIT-NAENRLGRGG 298 (377)
T ss_pred ecchhhhhhhcCCCCCCCCCH-----HHHHHHHHccCCcc-CC--CC-----CCCCCHHHHHHHHHHhc-CHhhcCCCCC
Confidence 999999999999999965321 11111111100000 00 00 01123457788899997 66665 59
Q ss_pred HHHHHHHh
Q 002063 943 MREVVKML 950 (973)
Q Consensus 943 ~~evl~~L 950 (973)
+.|++++-
T Consensus 299 ~~~~l~hp 306 (377)
T cd05629 299 AHEIKSHP 306 (377)
T ss_pred HHHHhcCC
Confidence 99999874
No 135
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=2.3e-35 Score=319.09 Aligned_cols=257 Identities=25% Similarity=0.324 Sum_probs=198.9
Q ss_pred CcccCeecccCcEEEEEEEEcCCCc--eEEEEEeec----cccHHHHHHHHHHHHhcCCCceeeEeEEEEeC------Ce
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKKNAG--TVAVKQLWK----GDGVKVFAAEMEILGKIRHRNILKLYACLLKG------GS 745 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~~~~--~vavK~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------~~ 745 (973)
|.+.+.||+|+||.||+|++..++. .||+|.+.. ....+.+.+|++++++++||||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3567889999999999999987664 589998754 23456788899999999999999999976432 24
Q ss_pred eEEEEEccCCCchHHHHHhhhc-CCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEeccc
Q 002063 746 SFLVLEYMPNGNLFQALHKRVK-EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFG 824 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~-~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 824 (973)
.++||||+++|+|.+++..... .....+++..+..++.|++.|++||| +++|+||||||+||++++++.++|+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhheEEcCCCCEEECCCC
Confidence 6899999999999998854321 22345789999999999999999999 7899999999999999999999999999
Q ss_pred CCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccc
Q 002063 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHE 903 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 903 (973)
+++...............+++.|+|||+..+..++.++|||||||++|||++ |+.||.... ... .... .....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--~~~---~~~~-~~~~~ 231 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVE--NSE---IYDY-LRQGN 231 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCC--HHH---HHHH-HHcCC
Confidence 9987644322222223346778999999998899999999999999999999 889986531 111 1111 11111
Q ss_pred cchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 904 NVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
.. .........+.+++.+||+++|++||++.++++.|+++
T Consensus 232 ~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 232 RL----------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CC----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00 00112334578999999999999999999999999864
No 136
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=3.4e-35 Score=316.09 Aligned_cols=252 Identities=25% Similarity=0.358 Sum_probs=202.9
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc-------cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-------GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
++|++.+.||+|++|.||+|....+++.||+|.+.... ..+.+.+|++++++++||||+++++++..++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 46889999999999999999999889999999876421 23467889999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++++|.+++... ..+++..+..++.|++.|++||| +.+++||||+|+||+++.++.++|+|||+++.
T Consensus 82 v~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~ 153 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY-----GALTETVTRKYTRQILEGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKR 153 (263)
T ss_pred EEEECCCCcHHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeccccee
Confidence 99999999999998753 34778888999999999999999 78999999999999999999999999999876
Q ss_pred ccCCCCc-ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 829 AENSPKV-SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 829 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
....... .......++..|+|||++.+..++.++||||+|+++||+++|+.||.... .. ..........
T Consensus 154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~-~~~~~~~~~~----- 223 (263)
T cd06625 154 LQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFE----AM-AAIFKIATQP----- 223 (263)
T ss_pred ccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccc----hH-HHHHHHhccC-----
Confidence 5432211 11123457889999999999889999999999999999999999996531 11 1111111110
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.....+......+.+++..||+.+|++||++.+++++.
T Consensus 224 -----~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~ 261 (263)
T cd06625 224 -----TNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHF 261 (263)
T ss_pred -----CCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCC
Confidence 01111223345678899999999999999999999764
No 137
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.5e-35 Score=328.88 Aligned_cols=247 Identities=23% Similarity=0.360 Sum_probs=196.1
Q ss_pred CeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
+.||+|+||+||+|++..+++.||||++.+. ...+.+.+|..+++.+ +||||+++++++..+...|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4689999999999999999999999998752 2345578899999988 799999999999999999999999999
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
|+|.+++... ..+++..+..++.|++.||+||| +++++||||||+||+++.++.+||+|||+++......
T Consensus 81 g~L~~~~~~~-----~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~-- 150 (329)
T cd05588 81 GDLMFHMQRQ-----RKLPEEHARFYSAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG-- 150 (329)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCccccccccCC--
Confidence 9999888643 35889999999999999999999 7899999999999999999999999999986432111
Q ss_pred ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCC---CccHHHHHHHhhcccccchhhcccc
Q 002063 836 SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGD---GKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 836 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||+..... ......+.........
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~--------- 221 (329)
T cd05588 151 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ--------- 221 (329)
T ss_pred CccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC---------
Confidence 1222356899999999999999999999999999999999999999643211 1111112111111110
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCC------HHHHHHH
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPP------MREVVKM 949 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt------~~evl~~ 949 (973)
. ..+......+.+++.+|++.||.+||+ +.++++|
T Consensus 222 ~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 222 I--RIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred C--CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 0 011122345788999999999999997 6788765
No 138
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=3e-35 Score=320.83 Aligned_cols=264 Identities=23% Similarity=0.331 Sum_probs=206.1
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcC-----CCceEEEEEeeccc---cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCe
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKK-----NAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGS 745 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~-----~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 745 (973)
..++|++.+.||+|+||.||+|..++ .+..||+|.+.... ....+.+|+.++++++||||+++++++.+.+.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 34678999999999999999997652 35579999876532 23457789999999999999999999999999
Q ss_pred eEEEEEccCCCchHHHHHhhhcC-----CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEE
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKE-----GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKI 820 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~-----~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 820 (973)
.|+||||+++|+|.+++...... ..+...+..+..++.|++.|++||| +++++||||||+||++++++.+++
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCCChheEEEcCCCcEEE
Confidence 99999999999999999764211 1344577788899999999999999 789999999999999999999999
Q ss_pred ecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhh
Q 002063 821 ADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHL 899 (973)
Q Consensus 821 ~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~ 899 (973)
+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||.... .........
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~-----~~~~~~~~~ 235 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS-----NEQVLKFVM 235 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHH
Confidence 99999876543322222222345678999999998899999999999999999998 788986531 111111111
Q ss_pred cccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCC
Q 002063 900 NNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPC 956 (973)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 956 (973)
.. . . ..........+.+++.+|++.||++||++.++++.+++....
T Consensus 236 ~~-~---------~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 281 (288)
T cd05061 236 DG-G---------Y-LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHP 281 (288)
T ss_pred cC-C---------C-CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCC
Confidence 11 0 0 001112235788999999999999999999999999986543
No 139
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2.1e-35 Score=327.15 Aligned_cols=242 Identities=26% Similarity=0.348 Sum_probs=194.4
Q ss_pred CeecccCcEEEEEEEEc---CCCceEEEEEeecc------ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 682 NLIGSGGTGKVYRLDLK---KNAGTVAVKQLWKG------DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~---~~~~~vavK~~~~~------~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
+.||+|+||+||+|+.. .+++.||||++... .....+.+|+++++.++||||+++++++..++..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 57999999999999874 46889999998752 2234567899999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
+++|+|.+++... ..+.+..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (323)
T cd05584 82 LSGGELFMHLERE-----GIFMEDTACFYLSEISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE 153 (323)
T ss_pred CCCchHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC
Confidence 9999999998753 34677888889999999999999 789999999999999999999999999998754222
Q ss_pred CCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..............
T Consensus 154 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~-----~~~~~~~~~~~~~~-------- 218 (323)
T cd05584 154 GT--VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAEN-----RKKTIDKILKGKLN-------- 218 (323)
T ss_pred CC--cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCC-----HHHHHHHHHcCCCC--------
Confidence 11 1223468999999999998889999999999999999999999997531 11111111111110
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHh
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRP-----PMREVVKML 950 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~L 950 (973)
.+......+.+++.+|++.||++|| ++.+++++-
T Consensus 219 ----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~ 257 (323)
T cd05584 219 ----LPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHP 257 (323)
T ss_pred ----CCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCC
Confidence 1112234678999999999999999 888887753
No 140
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=3.5e-35 Score=314.57 Aligned_cols=249 Identities=29% Similarity=0.395 Sum_probs=204.8
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeec----cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
+|++.+.||+|++|.||+|....+++.||+|.+.. ......+.+|++++++++|||++++++++..++..|+||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 47788899999999999999999899999998764 24456788999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
+++++|.+++... ....+++..+..++.|++.|++||| +.+++||||+|+||+++.++.++++|||++......
T Consensus 81 ~~~~~L~~~l~~~---~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~ 154 (256)
T cd08529 81 AENGDLHKLLKMQ---RGRPLPEDQVWRFFIQILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDN 154 (256)
T ss_pred CCCCcHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEcccccceeccCc
Confidence 9999999999864 2346888999999999999999999 789999999999999999999999999998766433
Q ss_pred CCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
.. ......|++.|+|||+..+..++.++|||||||++|||++|+.||.... ........... .
T Consensus 155 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~----------~ 217 (256)
T cd08529 155 TN--FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN-----QGALILKIIRG----------V 217 (256)
T ss_pred cc--hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHcC----------C
Confidence 22 1223457889999999999889999999999999999999999996542 11111111110 0
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
. ..........+.+++.+||+.+|++||++.+++++
T Consensus 218 ~-~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 218 F-PPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred C-CCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 0 01111344568899999999999999999999875
No 141
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.9e-35 Score=325.05 Aligned_cols=263 Identities=27% Similarity=0.386 Sum_probs=207.9
Q ss_pred hcCCcccCeecccCcEEEEEEEEc-------CCCceEEEEEeecc---ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeC
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLK-------KNAGTVAVKQLWKG---DGVKVFAAEMEILGKI-RHRNILKLYACLLKG 743 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~-------~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~ 743 (973)
..+|++.+.||+|+||.||+|+.. .++..||+|..... ...+.+.+|+.+++.+ +||||+++++++..+
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 457888999999999999999753 23457999987653 3346788999999999 899999999999999
Q ss_pred CeeEEEEEccCCCchHHHHHhhhcC-----------CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeee
Q 002063 744 GSSFLVLEYMPNGNLFQALHKRVKE-----------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL 812 (973)
Q Consensus 744 ~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill 812 (973)
...|+||||+++|+|.+++...... ....+++..+..++.|+++|++||| +++++||||||+||++
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA---SQKCIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH---HCCeeecccccceEEE
Confidence 9999999999999999999864211 1235788899999999999999999 7899999999999999
Q ss_pred cCCCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccH
Q 002063 813 DEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDI 891 (973)
Q Consensus 813 ~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~ 891 (973)
+.++.+||+|||+++...............++..|+|||++.+..++.++||||||+++||+++ |..||... ..
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~-----~~ 245 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-----PV 245 (304)
T ss_pred cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC-----CH
Confidence 9999999999999987654332222223345678999999998889999999999999999998 78888543 12
Q ss_pred HHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCC
Q 002063 892 VYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPC 956 (973)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 956 (973)
............ ..........+.+++.+||+.+|++||++.|+++.|+++...
T Consensus 246 ~~~~~~~~~~~~-----------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 246 EELFKLLKEGHR-----------MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred HHHHHHHHcCCc-----------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 222221111110 001123345688899999999999999999999999887543
No 142
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=4.9e-35 Score=322.70 Aligned_cols=240 Identities=29% Similarity=0.398 Sum_probs=192.3
Q ss_pred CeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
+.||+|+||+||+|++..+++.||||++... ...+.+..|..++... +||||+++++++.+++..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 4689999999999999998999999998763 3344566788888764 999999999999999999999999999
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
|+|.+++... ..+++..+..++.|++.||+||| +++++||||||+||+++.++.+||+|||++.......
T Consensus 81 g~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 150 (316)
T cd05619 81 GDLMFHIQSC-----HKFDLPRATFYAAEIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD-- 150 (316)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC--
Confidence 9999998753 34788889999999999999999 7899999999999999999999999999987432211
Q ss_pred ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccC
Q 002063 836 SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVAS 915 (973)
Q Consensus 836 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
.......||..|+|||++.+..++.++||||+||++|||++|+.||.... ............. ..
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~-----~~~~~~~i~~~~~--------~~-- 215 (316)
T cd05619 151 AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD-----EEELFQSIRMDNP--------CY-- 215 (316)
T ss_pred CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCC--------CC--
Confidence 11223568999999999999899999999999999999999999996531 1111111111111 00
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCHH-HHHH
Q 002063 916 ESIKEDMIKLLKIAVVCTTKLPNLRPPMR-EVVK 948 (973)
Q Consensus 916 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~-evl~ 948 (973)
+......+.+++.+|++.||++||++. ++.+
T Consensus 216 --~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 216 --PRWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred --CccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 111234577899999999999999997 6654
No 143
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=2.1e-35 Score=321.35 Aligned_cols=266 Identities=27% Similarity=0.341 Sum_probs=201.0
Q ss_pred cccCeecccCcEEEEEEEE----cCCCceEEEEEeeccc---cHHHHHHHHHHHHhcCCCceeeEeEEEEeC--CeeEEE
Q 002063 679 EEDNLIGSGGTGKVYRLDL----KKNAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKG--GSSFLV 749 (973)
Q Consensus 679 ~~~~~lG~G~~g~Vy~a~~----~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~lv 749 (973)
++.+.||+|+||+||++.. ..+++.||+|.+.... ....+.+|++++++++||||+++++++... ...++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 8889999999999987653 3467889999887532 356688999999999999999999987653 468999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++|+|.+++... .+++..+..++.|++.|++||| +.+++||||||+||++++++.++|+|||++...
T Consensus 87 ~e~~~~~~l~~~~~~~------~l~~~~~~~i~~~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 157 (283)
T cd05080 87 MEYVPLGSLRDYLPKH------KLNLAQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 157 (283)
T ss_pred ecCCCCCCHHHHHHHc------CCCHHHHHHHHHHHHHHHHHHH---HCCeeccccChheEEEcCCCcEEEeeccccccc
Confidence 9999999999998743 4899999999999999999999 789999999999999999999999999999866
Q ss_pred cCCCCccc-ccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhh
Q 002063 830 ENSPKVSD-YSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 830 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
........ .....++..|+|||++.+..++.++||||||+++|||++|..||................. .......+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 236 (283)
T cd05080 158 PEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQ-MTVVRLIEL 236 (283)
T ss_pred CCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccc-cchhhhhhh
Confidence 43322111 1123456679999999888899999999999999999999999865421111100000000 000000111
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
.+..............+.+++..||+++|++||+++++++.|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 237 LERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 1111111112233467889999999999999999999999998764
No 144
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=3e-35 Score=322.03 Aligned_cols=265 Identities=24% Similarity=0.330 Sum_probs=201.9
Q ss_pred cCCcccCeecccCcEEEEEEEEcCC--------------CceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKN--------------AGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYA 738 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~--------------~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~ 738 (973)
.+|++.+.||+|+||.||+++.... ...||+|++... .....+.+|++++++++|||++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 5789999999999999999987542 235899988653 23456889999999999999999999
Q ss_pred EEEeCCeeEEEEEccCCCchHHHHHhhhcC-------CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCee
Q 002063 739 CLLKGGSSFLVLEYMPNGNLFQALHKRVKE-------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNIL 811 (973)
Q Consensus 739 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nil 811 (973)
++..+...++||||+++++|.+++...... ....+++..+..++.|++.|++||| +.+++||||||+||+
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA---SLNFVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH---hcCeeccccChhhEE
Confidence 999999999999999999999999653211 1234688899999999999999999 789999999999999
Q ss_pred ecCCCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh--CCCCCCcccCCCc
Q 002063 812 LDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT--GRKPVEEEYGDGK 889 (973)
Q Consensus 812 l~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~--g~~pf~~~~~~~~ 889 (973)
++.++.+||+|||++................++..|+|||+..++.++.++|||||||++|||++ |..||.... ..
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~--~~ 239 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS--DE 239 (295)
T ss_pred EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccC--hH
Confidence 99999999999999876543322222222345778999999988889999999999999999998 667776431 11
Q ss_pred cHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 890 DIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
................ ............+.+++.+||+.+|++||++.+|++.|++
T Consensus 240 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 240 QVIENTGEFFRNQGRQ-------IYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred HHHHHHHHhhhhcccc-------ccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 1111111111000000 0000111123578999999999999999999999999864
No 145
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=4.2e-35 Score=329.96 Aligned_cols=264 Identities=28% Similarity=0.283 Sum_probs=199.4
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCC----
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGG---- 744 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~---- 744 (973)
....+|++.+.||+|+||.||+|++..+++.||||++... .....+.+|+.+++.++||||+++++++...+
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 4567999999999999999999999998999999998642 34556788999999999999999999986543
Q ss_pred --eeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEec
Q 002063 745 --SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIAD 822 (973)
Q Consensus 745 --~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 822 (973)
..|+||||+++ ++.+.+.. .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~~-------~~~~~~~~~~~~qi~~~L~~LH---~~~ivHrDlkp~NIl~~~~~~~kl~D 166 (359)
T cd07876 98 FQDVYLVMELMDA-NLCQVIHM-------ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILD 166 (359)
T ss_pred cceeEEEEeCCCc-CHHHHHhc-------cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEec
Confidence 47999999965 66666542 3678888899999999999999 78999999999999999999999999
Q ss_pred ccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHH--------
Q 002063 823 FGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYW-------- 894 (973)
Q Consensus 823 fgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~-------- 894 (973)
||+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||....... .....
T Consensus 167 fg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~-~~~~~~~~~~~~~ 242 (359)
T cd07876 167 FGLARTACTNF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHID-QWNKVIEQLGTPS 242 (359)
T ss_pred CCCccccccCc---cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCc
Confidence 99987543221 1223468999999999999999999999999999999999999997542100 00000
Q ss_pred ----------HHHhhcccccch-----hhcccc-c--cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 895 ----------VSTHLNNHENVL-----KVLDCE-V--ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 895 ----------~~~~~~~~~~~~-----~~~~~~-~--~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
+........... +..... . ...........+.+++.+|++.||++|||+.|+++|-.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 317 (359)
T cd07876 243 AEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPY 317 (359)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCch
Confidence 000000000000 000000 0 00001112356789999999999999999999999754
No 146
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=3.2e-35 Score=325.50 Aligned_cols=242 Identities=28% Similarity=0.369 Sum_probs=195.3
Q ss_pred CeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
+.||+|+||+||+|++..+++.||||++... ...+.+..|.+++..+ +||||+++++++..++..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 3689999999999999998999999998752 3345567888888866 799999999999999999999999999
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++........
T Consensus 81 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~- 151 (321)
T cd05591 81 GDLMFQIQRS-----RKFDEPRSRFYAAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV- 151 (321)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecccceecccCCc-
Confidence 9999888753 35788889999999999999999 78999999999999999999999999999875432211
Q ss_pred ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccC
Q 002063 836 SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVAS 915 (973)
Q Consensus 836 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..............
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~-----~~~~~~~i~~~~~~----------- 214 (321)
T cd05591 152 -TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN-----EDDLFESILHDDVL----------- 214 (321)
T ss_pred -cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCC-----HHHHHHHHHcCCCC-----------
Confidence 1223568999999999998899999999999999999999999997541 11111111111100
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCC-------CHHHHHHHh
Q 002063 916 ESIKEDMIKLLKIAVVCTTKLPNLRP-------PMREVVKML 950 (973)
Q Consensus 916 ~~~~~~~~~l~~l~~~cl~~dP~~Rp-------t~~evl~~L 950 (973)
.+......+.+++.+|++.||++|| ++.+++++-
T Consensus 215 -~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp 255 (321)
T cd05591 215 -YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHP 255 (321)
T ss_pred -CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCC
Confidence 0111234678899999999999999 888888763
No 147
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.6e-35 Score=316.60 Aligned_cols=254 Identities=24% Similarity=0.354 Sum_probs=202.0
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
..+|++.+.||+|+||.||+|++..+++.||+|++... .....+.+|+.++++++||||+++++++..++..|+||||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 35789999999999999999999988999999988653 3455678899999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
+++++|.++++.. ..+++..+..++.|++.|++||| +.+++|||++|+||+++.++.++|+|||++......
T Consensus 88 ~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06646 88 CGGGSLQDIYHVT-----GPLSELQIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAAKITAT 159 (267)
T ss_pred CCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcCccceeeccc
Confidence 9999999988643 34788899999999999999999 789999999999999999999999999999866432
Q ss_pred CCcccccccCcccccccccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhc
Q 002063 833 PKVSDYSCFAGTHGYIAPELAY---TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
. .......|+..|+|||.+. ...++.++||||+||++|||++|+.||........ ...+ ... ...
T Consensus 160 ~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~-~~~~-----~~~----~~~ 227 (267)
T cd06646 160 I--AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-LFLM-----SKS----NFQ 227 (267)
T ss_pred c--cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh-heee-----ecC----CCC
Confidence 1 1122346788999999874 34577899999999999999999999864321100 0000 000 000
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.+.. .........+.+++.+||+.+|++||+++++++++
T Consensus 228 ~~~~--~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 228 PPKL--KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred CCCC--ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 0000 01112345788999999999999999999999875
No 148
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=3.7e-35 Score=323.92 Aligned_cols=240 Identities=28% Similarity=0.376 Sum_probs=192.1
Q ss_pred CeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
+.||+|+||.||+|+++.+++.||||++... ........|..++... +||+|+++++++..++..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 4699999999999999999999999998753 2344566788887754 899999999999999999999999999
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.++|+|||+++......
T Consensus 81 g~L~~~i~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 150 (316)
T cd05620 81 GDLMFHIQDK-----GRFDLYRATFYAAEIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD-- 150 (316)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCC--
Confidence 9999988753 35788889999999999999999 7899999999999999999999999999987432211
Q ss_pred ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccC
Q 002063 836 SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVAS 915 (973)
Q Consensus 836 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ............. ..
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~-----~~~~~~~~~~~~~--------~~-- 215 (316)
T cd05620 151 NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDD-----EDELFESIRVDTP--------HY-- 215 (316)
T ss_pred CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCC--------CC--
Confidence 12233568999999999999999999999999999999999999996531 1111111111111 00
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCHH-HHHH
Q 002063 916 ESIKEDMIKLLKIAVVCTTKLPNLRPPMR-EVVK 948 (973)
Q Consensus 916 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~-evl~ 948 (973)
+.....++.+++.+|++.||++||++. ++.+
T Consensus 216 --~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~ 247 (316)
T cd05620 216 --PRWITKESKDILEKLFERDPTRRLGVVGNIRG 247 (316)
T ss_pred --CCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 111234577899999999999999985 5653
No 149
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=5.6e-36 Score=339.37 Aligned_cols=251 Identities=23% Similarity=0.274 Sum_probs=197.2
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
+|++.+.||+|+||+||+|+...+++.||||++.+. .....+.+|++++++++||||+++++.+.+++..|+|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 689999999999999999999999999999998652 234567889999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|+++|+|.+++... ..++...+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++..+..
T Consensus 82 ~~~~g~L~~~i~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~ 153 (376)
T cd05598 82 YIPGGDMMSLLIRL-----GIFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 153 (376)
T ss_pred CCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccc
Confidence 99999999999753 34678888889999999999999 78999999999999999999999999999753310
Q ss_pred CCC-----------------------------------------cccccccCcccccccccccccCCCCccchHHHHHHH
Q 002063 832 SPK-----------------------------------------VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVV 870 (973)
Q Consensus 832 ~~~-----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~ 870 (973)
... ........||+.|+|||++.+..++.++||||+||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 233 (376)
T cd05598 154 THDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 233 (376)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccce
Confidence 000 000112469999999999999999999999999999
Q ss_pred HHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCC---CHHHHH
Q 002063 871 LLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRP---PMREVV 947 (973)
Q Consensus 871 l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp---t~~evl 947 (973)
+|||++|+.||..... ............. ..+ + ........+.+++.+|+ .+|.+|+ ++.+++
T Consensus 234 lyell~G~~Pf~~~~~-----~~~~~~i~~~~~~-~~~--~-----~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell 299 (376)
T cd05598 234 LYEMLVGQPPFLADTP-----AETQLKVINWETT-LHI--P-----SQAKLSREASDLILRLC-CGAEDRLGKNGADEIK 299 (376)
T ss_pred eeehhhCCCCCCCCCH-----HHHHHHHhccCcc-ccC--C-----CCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHh
Confidence 9999999999975421 1111111110000 000 0 01112344666777766 5999999 899999
Q ss_pred HH
Q 002063 948 KM 949 (973)
Q Consensus 948 ~~ 949 (973)
+|
T Consensus 300 ~h 301 (376)
T cd05598 300 AH 301 (376)
T ss_pred CC
Confidence 87
No 150
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.5e-35 Score=322.63 Aligned_cols=258 Identities=22% Similarity=0.289 Sum_probs=203.1
Q ss_pred cCCcccCeecccCcEEEEEEEEcC-----CCceEEEEEeeccc---cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKK-----NAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~-----~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
.+|++.+.||+|+||+||+|++.. .+..||||++.... ..+.+.+|+.+++.++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~ 84 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS 84 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence 457888999999999999998753 35789999987532 2356888999999999999999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhc-----------CCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCC
Q 002063 748 LVLEYMPNGNLFQALHKRVK-----------EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY 816 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~-----------~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~ 816 (973)
+++||+++++|.+++..... .....+++..+..++.|++.||+|+| +++++||||||+||++++++
T Consensus 85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH---~~gi~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS---SHHVVHKDLATRNVLVFDKL 161 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HcCccccccchhheEecCCC
Confidence 99999999999999864211 11234788889999999999999999 78999999999999999999
Q ss_pred ceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHH
Q 002063 817 EPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWV 895 (973)
Q Consensus 817 ~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~ 895 (973)
.+||+|||+++...............+++.|+|||++.+..++.++||||+||++|||++ |..||.... .. ...
T Consensus 162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~--~~---~~~ 236 (283)
T cd05091 162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS--NQ---DVI 236 (283)
T ss_pred ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCC--HH---HHH
Confidence 999999999876543322222233456789999999988889999999999999999998 888886531 11 111
Q ss_pred HHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 896 STHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
........ ..........+.+++..||+.+|++||++++|++.|+.
T Consensus 237 ~~i~~~~~-----------~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 237 EMIRNRQV-----------LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHcCCc-----------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 11111110 00112334557899999999999999999999999874
No 151
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=4e-35 Score=321.20 Aligned_cols=265 Identities=24% Similarity=0.339 Sum_probs=201.9
Q ss_pred cCCcccCeecccCcEEEEEEEEcC----------------CCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKK----------------NAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKL 736 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~----------------~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l 736 (973)
++|++.+.||+|+||+||+|.+.. ++..||+|++... ....++.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 468999999999999999986432 3457999988653 234578899999999999999999
Q ss_pred eEEEEeCCeeEEEEEccCCCchHHHHHhhhcCC------CCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCe
Q 002063 737 YACLLKGGSSFLVLEYMPNGNLFQALHKRVKEG------KPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNI 810 (973)
Q Consensus 737 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~------~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Ni 810 (973)
++++..++..++||||+++|+|.+++....... ...+++..+..++.|++.|++||| +.+++||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS---SLNFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCeecccCChheE
Confidence 999999999999999999999999997642211 124778889999999999999999 78999999999999
Q ss_pred eecCCCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh--CCCCCCcccCCC
Q 002063 811 LLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT--GRKPVEEEYGDG 888 (973)
Q Consensus 811 ll~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~--g~~pf~~~~~~~ 888 (973)
+++.++.++++|||+++...............++..|+|||+..++.++.++|||||||++|||++ |..||.... .
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~--~ 239 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLS--D 239 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccC--h
Confidence 999999999999999876543322111222344678999999888889999999999999999998 778886431 1
Q ss_pred ccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 889 KDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
................ ... ...+..+...+.+++.+||+.||.+||++.+|++.|++
T Consensus 240 ~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 240 EQVIENTGEFFRDQGR--QVY-----LPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred HHHHHHHHHHHhhccc--ccc-----CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 1111111111100000 000 00111233568899999999999999999999998864
No 152
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.6e-35 Score=325.29 Aligned_cols=261 Identities=27% Similarity=0.374 Sum_probs=203.5
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCce--EEEEEeecc---ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCee
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGT--VAVKQLWKG---DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSS 746 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~--vavK~~~~~---~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 746 (973)
..+++|++.+.||+|+||.||+|.+..++.. +|+|..... ...+.+.+|++++.++ +||||+++++++..++..
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~ 83 (303)
T cd05088 4 LEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 83 (303)
T ss_pred cchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCc
Confidence 3456889999999999999999998876654 577766542 2445688899999999 899999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhc-----------CCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVK-----------EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED 815 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~-----------~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~ 815 (973)
|+||||+++|+|.++++.... .....+++..+..++.|++.|++||| +++++||||||+||+++.+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dlkp~Nili~~~ 160 (303)
T cd05088 84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGEN 160 (303)
T ss_pred eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEecCC
Confidence 999999999999999976421 11235789999999999999999999 7899999999999999999
Q ss_pred CceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHH
Q 002063 816 YEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYW 894 (973)
Q Consensus 816 ~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~ 894 (973)
+.+||+|||++...... .......++..|+|||++.+..++.++|||||||++|||++ |..||..... . ..
T Consensus 161 ~~~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~---~~ 232 (303)
T cd05088 161 YVAKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--A---EL 232 (303)
T ss_pred CcEEeCccccCcccchh---hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh--H---HH
Confidence 99999999998633211 11111234668999999988889999999999999999998 9999964321 1 11
Q ss_pred HHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 895 VSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
..... ... ...........+.+++.+||+.+|++||++.+++++++++..
T Consensus 233 ~~~~~-~~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~ 282 (303)
T cd05088 233 YEKLP-QGY----------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 282 (303)
T ss_pred HHHHh-cCC----------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11111 000 000111123457889999999999999999999999887643
No 153
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=3e-35 Score=326.02 Aligned_cols=246 Identities=27% Similarity=0.353 Sum_probs=196.9
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEEEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~ 750 (973)
+|++.+.||+|+||+||+|++..+++.||||++.+. .....+..|..++... +||+|+++++++...+..|+||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 478889999999999999999998999999998753 2234456778888777 5899999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 81 E~~~~g~L~~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~ 152 (323)
T cd05616 81 EYVNGGDLMYQIQQV-----GRFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENM 152 (323)
T ss_pred cCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEEccCCCceecC
Confidence 999999999988653 34788899999999999999999 7899999999999999999999999999987543
Q ss_pred CCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcc
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.... . ............
T Consensus 153 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~--~---~~~~~~i~~~~~------- 218 (323)
T cd05616 153 WDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED--E---DELFQSIMEHNV------- 218 (323)
T ss_pred CCC--CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCC--H---HHHHHHHHhCCC-------
Confidence 221 12223568999999999999999999999999999999999999997531 1 111111111110
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHH
Q 002063 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPM-----REVVKM 949 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~-----~evl~~ 949 (973)
..+.....++.+++.+|++.||++|++. .++.++
T Consensus 219 -----~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 219 -----AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred -----CCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 0111234567889999999999999984 666554
No 154
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=3.3e-35 Score=324.73 Aligned_cols=241 Identities=29% Similarity=0.379 Sum_probs=196.1
Q ss_pred CeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
+.||+|+||+||+|++..+++.||||++.+. .....+.+|.++++.+ +||||+++++++...+..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4689999999999999998999999998753 3345567888998887 799999999999999999999999999
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
|+|.+++... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~-----~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 150 (318)
T cd05570 81 GDLMFHIQRS-----GRFDEPRARFYAAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG-- 150 (318)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCC--
Confidence 9999888753 35889999999999999999999 7899999999999999999999999999986432211
Q ss_pred ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccC
Q 002063 836 SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVAS 915 (973)
Q Consensus 836 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
.......|++.|+|||++.+..++.++||||+||++|||++|+.||.... ..............
T Consensus 151 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~-----~~~~~~~i~~~~~~----------- 214 (318)
T cd05570 151 VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD-----EDELFQSILEDEVR----------- 214 (318)
T ss_pred CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC-----HHHHHHHHHcCCCC-----------
Confidence 11223468999999999999999999999999999999999999996431 11222211111110
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHH
Q 002063 916 ESIKEDMIKLLKIAVVCTTKLPNLRPPM-----REVVKM 949 (973)
Q Consensus 916 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~-----~evl~~ 949 (973)
.+......+.+++.+||+.||.+||++ .+++++
T Consensus 215 -~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 215 -YPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred -CCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 111234567899999999999999999 888775
No 155
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.2e-35 Score=337.36 Aligned_cols=251 Identities=22% Similarity=0.278 Sum_probs=195.2
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
.|++.+.||+|+||+||+|+...+++.||||++.+. ...+.+.+|++++++++||||+++++++.+++..|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 588899999999999999999999999999998753 234567889999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|+++|+|.+++.+. ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||++.....
T Consensus 82 ~~~gg~L~~~l~~~-----~~~~e~~~~~~~~qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~ 153 (382)
T cd05625 82 YIPGGDMMSLLIRM-----GIFPEDLARFYIAELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 153 (382)
T ss_pred CCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEeECCCCccccc
Confidence 99999999998753 24678888899999999999999 78999999999999999999999999999753210
Q ss_pred CCC---------------------------------------------cccccccCcccccccccccccCCCCccchHHH
Q 002063 832 SPK---------------------------------------------VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFS 866 (973)
Q Consensus 832 ~~~---------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws 866 (973)
... ........||+.|+|||++.+..++.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwS 233 (382)
T cd05625 154 THDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWS 233 (382)
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEe
Confidence 000 00011246899999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCC---H
Q 002063 867 FGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPP---M 943 (973)
Q Consensus 867 lG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt---~ 943 (973)
+||++|||++|+.||.... ............... . ............+++.+|+ .+|.+|++ +
T Consensus 234 lGvil~elltG~~Pf~~~~-----~~~~~~~i~~~~~~~-~-------~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~ 299 (382)
T cd05625 234 VGVILYEMLVGQPPFLAQT-----PLETQMKVINWQTSL-H-------IPPQAKLSPEASDLIIKLC-RGPEDRLGKNGA 299 (382)
T ss_pred chHHHHHHHhCCCCCCCCC-----HHHHHHHHHccCCCc-C-------CCCcccCCHHHHHHHHHHc-cCHhHcCCCCCH
Confidence 9999999999999997531 111111111100000 0 0001112344566666665 59999997 8
Q ss_pred HHHHHH
Q 002063 944 REVVKM 949 (973)
Q Consensus 944 ~evl~~ 949 (973)
.++++|
T Consensus 300 ~ei~~h 305 (382)
T cd05625 300 DEIKAH 305 (382)
T ss_pred HHHhcC
Confidence 888775
No 156
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.2e-35 Score=334.62 Aligned_cols=262 Identities=22% Similarity=0.268 Sum_probs=199.1
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
..|.+.+.||+|+||.||+|.+..+++.||||... ...+.+|++++++++||||+++++++..++..++|||++ .
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~----~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~-~ 243 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW----YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKY-R 243 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc----ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEcc-C
Confidence 46899999999999999999999999999999643 234578999999999999999999999999999999999 5
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
++|.+++... ...+++..+..++.|+++||+||| +.+|+||||||+|||++.++.+||+|||+++........
T Consensus 244 ~~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~ 316 (461)
T PHA03211 244 SDLYTYLGAR----LRPLGLAQVTAVARQLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWST 316 (461)
T ss_pred CCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCEEECcCCHHHEEECCCCCEEEcccCCceeccccccc
Confidence 7898888643 235899999999999999999999 789999999999999999999999999999866433222
Q ss_pred ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccc-CC-----CccHHHHHHHhhcccccchhhc
Q 002063 836 SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEY-GD-----GKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 836 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
.......||..|+|||++.+..++.++|||||||++|||++|..|+-... .. ...+...+..............
T Consensus 317 ~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~ 396 (461)
T PHA03211 317 PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHA 396 (461)
T ss_pred ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCc
Confidence 22223568999999999999999999999999999999999876553211 11 1112222211110000000000
Q ss_pred ----------------cccccChhh---HHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 910 ----------------DCEVASESI---KEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 910 ----------------~~~~~~~~~---~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.+....... ......+.+++.+||+.||.+|||+.|++++
T Consensus 397 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 397 GSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred chHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 000000000 1122367889999999999999999999987
No 157
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=4.7e-35 Score=313.56 Aligned_cols=250 Identities=27% Similarity=0.405 Sum_probs=202.6
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEEEE-eCCeeEEEEEcc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLL-KGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~~lv~e~~ 753 (973)
..+|++.+.||+|+||.||+|... +..||+|........+.+.+|+.++++++||+++++++++. .+...++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 347888999999999999999876 77899999877666778899999999999999999999764 456789999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++++|.+++... ....+++..+..++.|++.|++||| +.+++||||||+||+++.++.+|++|||++.......
T Consensus 83 ~~~~L~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~ 156 (256)
T cd05082 83 AKGSLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 156 (256)
T ss_pred CCCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccccchheEEEcCCCcEEecCCccceeccccC
Confidence 999999999753 2345789999999999999999999 7899999999999999999999999999987543221
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
....++..|+|||++.+..++.++|||||||++|||++ |+.||... ..............
T Consensus 157 -----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~-----~~~~~~~~~~~~~~--------- 217 (256)
T cd05082 157 -----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-----PLKDVVPRVEKGYK--------- 217 (256)
T ss_pred -----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHhcCCC---------
Confidence 12234568999999988889999999999999999997 99998643 12222211111100
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
..........+.+++.+|++.+|++||++.+++++|+++
T Consensus 218 --~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 218 --MDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred --CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 011122345688999999999999999999999999764
No 158
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=3.9e-35 Score=315.05 Aligned_cols=252 Identities=35% Similarity=0.507 Sum_probs=201.5
Q ss_pred CcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHH----HHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVK----VFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~----~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
|++.+.||+|+||+||+|+...+++.||+|++....... ...+|+.++++++||||+++++++..+...++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 677899999999999999999999999999988743222 2345999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++++|.+++... ..+++..+..++.|+++||++|| +.+++|+||||+||+++.++.++|+|||.+......
T Consensus 81 ~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~- 151 (260)
T PF00069_consen 81 PGGSLQDYLQKN-----KPLSEEEILKIAYQILEALAYLH---SKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSEN- 151 (260)
T ss_dssp TTEBHHHHHHHH-----SSBBHHHHHHHHHHHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEESSGTTTEESTST-
T ss_pred cccccccccccc-----ccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc-
Confidence 999999999832 35789999999999999999999 789999999999999999999999999999764111
Q ss_pred CcccccccCcccccccccccc-cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAY-TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
........++..|+|||++. +..++.++||||+|+++|+|++|..||... ...+.............. ..
T Consensus 152 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~--~~~~~~~~~~~~~~~~~~------~~ 222 (260)
T PF00069_consen 152 -NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEES--NSDDQLEIIEKILKRPLP------SS 222 (260)
T ss_dssp -TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTS--SHHHHHHHHHHHHHTHHH------HH
T ss_pred -ccccccccccccccccccccccccccccccccccccccccccccccccccc--cchhhhhhhhhccccccc------cc
Confidence 12233456889999999998 888999999999999999999999999764 111111111111111100 00
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
. .........+.+++.+|++.||++||++.+++++
T Consensus 223 ~--~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 223 S--QQSREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp T--TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred c--cccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0 0001112678999999999999999999999875
No 159
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=3.5e-35 Score=314.47 Aligned_cols=251 Identities=27% Similarity=0.381 Sum_probs=200.5
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccC
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
.+|++.+.||+|+||.||+|+++. +..+|+|++... .....+.+|++++++++||||+++++++...+..|+||||++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~-~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRG-KIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecC-CccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence 357888999999999999999874 668999987653 345678899999999999999999999999999999999999
Q ss_pred CCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCC
Q 002063 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~ 834 (973)
+++|.+++... ...+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||.++.......
T Consensus 83 ~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~ 155 (256)
T cd05059 83 NGCLLNYLRER----KGKLGTEWLLDMCSDVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY 155 (256)
T ss_pred CCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHhhEEECCCCcEEECCcccceecccccc
Confidence 99999999753 235789999999999999999999 78999999999999999999999999999876543211
Q ss_pred cccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhccccc
Q 002063 835 VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 835 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
. ......++..|+|||++.+..++.++||||||+++||+++ |+.||.... ..... .... ... .
T Consensus 156 ~-~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--~~~~~---~~~~-~~~------~--- 219 (256)
T cd05059 156 T-SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFS--NSEVV---ESVS-AGY------R--- 219 (256)
T ss_pred c-ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCC--HHHHH---HHHH-cCC------c---
Confidence 1 1111223457999999998899999999999999999999 899996431 11111 1111 000 0
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
...+...+.++.+++.+||+.+|++||++.|+++.|.
T Consensus 220 -~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~ 256 (256)
T cd05059 220 -LYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQLT 256 (256)
T ss_pred -CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence 0111123556889999999999999999999999863
No 160
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=4.5e-35 Score=322.83 Aligned_cols=265 Identities=21% Similarity=0.251 Sum_probs=200.9
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
+++|++.+.||+|+||+||+|+++.+++.||+|++... .....+.+|++++++++||||+++++++..++..++|||
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 84 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFE 84 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEe
Confidence 45789999999999999999999988999999988642 233457789999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|++ ++|.+++... ...+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++.....
T Consensus 85 ~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 156 (309)
T cd07872 85 YLD-KDLKQYMDDC----GNIMSMHNVKIFLYQILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSV 156 (309)
T ss_pred CCC-CCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECccccceecCC
Confidence 996 4888887643 334788889999999999999999 78999999999999999999999999999875433
Q ss_pred CCCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccc--------
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH-------- 902 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~-------- 902 (973)
... ......++..|+|||++.+ ..++.++||||+||++|||++|+.||..... .+....+.......
T Consensus 157 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 232 (309)
T cd07872 157 PTK--TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTV--EDELHLIFRLLGTPTEETWPGI 232 (309)
T ss_pred Ccc--ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCCHHHHhhh
Confidence 221 1223457899999998865 4688999999999999999999999965421 11111111100000
Q ss_pred ---ccchhhccccccC----hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 903 ---ENVLKVLDCEVAS----ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 903 ---~~~~~~~~~~~~~----~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
......-.+.... ........++.+++.+|++.||.+|||+.|++++-.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~ 288 (309)
T cd07872 233 SSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAY 288 (309)
T ss_pred cchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChh
Confidence 0000000000000 001123456789999999999999999999998543
No 161
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.1e-36 Score=292.69 Aligned_cols=254 Identities=26% Similarity=0.346 Sum_probs=208.6
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc------cc----HHHHHHHHHHHHhc-CCCceeeEeEEEEe
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG------DG----VKVFAAEMEILGKI-RHRNILKLYACLLK 742 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~------~~----~~~~~~E~~~l~~l-~hpniv~l~~~~~~ 742 (973)
....|+..+.+|+|..++|.++.++.+++.+|+|++... .. .+.-.+|+.+++++ .||+|+++.++|+.
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes 94 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES 94 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence 345677888999999999999999999999999988541 11 12345699999998 69999999999999
Q ss_pred CCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEec
Q 002063 743 GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIAD 822 (973)
Q Consensus 743 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 822 (973)
+...++|+|.|+.|.|+||+.. ...+++....+|+.|+.+|++||| .+.|||||+||+|||++++..+||+|
T Consensus 95 ~sF~FlVFdl~prGELFDyLts-----~VtlSEK~tR~iMrqlfegVeylH---a~~IVHRDLKpENILlddn~~i~isD 166 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLTS-----KVTLSEKETRRIMRQLFEGVEYLH---ARNIVHRDLKPENILLDDNMNIKISD 166 (411)
T ss_pred cchhhhhhhhcccchHHHHhhh-----heeecHHHHHHHHHHHHHHHHHHH---HhhhhhcccChhheeeccccceEEec
Confidence 9999999999999999999985 356888899999999999999999 88999999999999999999999999
Q ss_pred ccCCccccCCCCcccccccCcccccccccccc------cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHH
Q 002063 823 FGVAKIAENSPKVSDYSCFAGTHGYIAPELAY------TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVS 896 (973)
Q Consensus 823 fgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~ 896 (973)
||+++..+++.. ....+||++|.|||.+. ...|+..+|+||+||++|.++.|..||.-. .+++.
T Consensus 167 FGFa~~l~~Gek---LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR-------kQmlM 236 (411)
T KOG0599|consen 167 FGFACQLEPGEK---LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR-------KQMLM 236 (411)
T ss_pred cceeeccCCchh---HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH-------HHHHH
Confidence 999998876643 34478999999999874 345788899999999999999999999532 11111
Q ss_pred HhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 897 THLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.+.-.... -.+....+.+......+++.+|++.||.+|.|+.|+++|-.
T Consensus 237 LR~ImeGk------yqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpf 285 (411)
T KOG0599|consen 237 LRMIMEGK------YQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPF 285 (411)
T ss_pred HHHHHhcc------cccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChH
Confidence 11111110 12233456677778899999999999999999999998754
No 162
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.2e-35 Score=319.95 Aligned_cols=249 Identities=23% Similarity=0.318 Sum_probs=203.0
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.+|++.+.||+|+||.||+|++..+++.||+|.+... ...+.+.+|+.+++.++|||++++++++..+...|+||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 4788999999999999999999888999999988653 34567889999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++++|.+++... .+++.++..++.|++.|++||| +.+++||||||+||+++.++.++|+|||++.......
T Consensus 100 ~~~~L~~~~~~~------~~~~~~~~~i~~ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~ 170 (296)
T cd06654 100 AGGSLTDVVTET------CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (296)
T ss_pred CCCCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEECccccchhccccc
Confidence 999999998642 3678899999999999999999 7899999999999999999999999999987553322
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
. ......|++.|+|||.+.+..++.++|||||||++|+|++|+.||...... ..+.. ...... .
T Consensus 171 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~----~~~~~-~~~~~~---------~ 234 (296)
T cd06654 171 S--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL----RALYL-IATNGT---------P 234 (296)
T ss_pred c--ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH----HhHHH-HhcCCC---------C
Confidence 1 122346888999999998888999999999999999999999999654211 11111 100000 0
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
...........+.+++.+||.++|++||++.|++++
T Consensus 235 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 235 ELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred CCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 001122334568889999999999999999999985
No 163
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=3.1e-35 Score=320.87 Aligned_cols=259 Identities=27% Similarity=0.363 Sum_probs=204.1
Q ss_pred hcCCcccCeecccCcEEEEEEEEcC-----CCceEEEEEeeccc---cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCee
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKK-----NAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSS 746 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~-----~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 746 (973)
..+|++.+.||+|+||.||+|.... ++..||+|++.... ..+.+.+|++++++++||||+++++++..++..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 4578899999999999999999753 57789999886532 345688999999999999999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhc-----------------CCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVK-----------------EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSN 809 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~-----------------~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~N 809 (973)
++||||+++|+|.+++..... .....+++..+..++.|++.||+|+| +.+++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH---~~~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS---ERKFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCeecccccHhh
Confidence 999999999999999975311 12235788899999999999999999 7899999999999
Q ss_pred eeecCCCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCC
Q 002063 810 ILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDG 888 (973)
Q Consensus 810 ill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~ 888 (973)
|++++++.++++|||++.................+..|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~--- 237 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMA--- 237 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC---
Confidence 9999999999999999875533322111222334678999999988899999999999999999998 888885431
Q ss_pred ccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 889 KDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
......... ... .. ..+.....++.+++.+|++.+|++||++.|+++.|++
T Consensus 238 --~~~~~~~~~-~~~---------~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 238 --HEEVIYYVR-DGN---------VL-SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred --HHHHHHHHh-cCC---------CC-CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 111111111 110 00 0111234568899999999999999999999999874
No 164
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=5.4e-35 Score=314.08 Aligned_cols=253 Identities=28% Similarity=0.406 Sum_probs=202.2
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccC
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
.+|++.++||+|+||+||+|++..+ ..||+|++... ...+.+.+|++++++++||||+++++++. +...++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMS 83 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCC
Confidence 5689999999999999999998764 56999988763 34567899999999999999999999874 456899999999
Q ss_pred CCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCC
Q 002063 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~ 834 (973)
+|+|.+++... ....+++..+..++.|++.||+|+| +.+++||||||+||++++++.++|+|||.++.......
T Consensus 84 ~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~ 157 (262)
T cd05071 84 KGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 157 (262)
T ss_pred CCcHHHHHhhc---cccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcccEEEcCCCcEEeccCCceeecccccc
Confidence 99999999753 2335789999999999999999999 78999999999999999999999999999976643322
Q ss_pred cccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhccccc
Q 002063 835 VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 835 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
. ......++..|+|||+..+..++.++||||||+++||+++ |+.||..... .. .........
T Consensus 158 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~--~~---~~~~~~~~~----------- 220 (262)
T cd05071 158 T-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--RE---VLDQVERGY----------- 220 (262)
T ss_pred c-cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh--HH---HHHHHhcCC-----------
Confidence 1 1122346678999999988899999999999999999999 8888865321 11 111110000
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
......+....+.+++.+|++.+|++||++.++++.|++.
T Consensus 221 ~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 221 RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred CCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 0011223456788999999999999999999999999864
No 165
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3e-35 Score=323.86 Aligned_cols=262 Identities=27% Similarity=0.370 Sum_probs=205.5
Q ss_pred hcCCcccCeecccCcEEEEEEEEcC-------CCceEEEEEeecc---ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeC
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKK-------NAGTVAVKQLWKG---DGVKVFAAEMEILGKI-RHRNILKLYACLLKG 743 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~-------~~~~vavK~~~~~---~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~ 743 (973)
.++|.+.+.||+|+||.||+|++.. +...||+|.+... .....+.+|+++++++ +||||+++++++..+
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 3578999999999999999998743 2356999988753 3345678899999999 799999999999999
Q ss_pred CeeEEEEEccCCCchHHHHHhhhcC-----------CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeee
Q 002063 744 GSSFLVLEYMPNGNLFQALHKRVKE-----------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL 812 (973)
Q Consensus 744 ~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill 812 (973)
+..|+||||+++|+|.+++...... ....+++..+..++.|++.||+||| +++++||||||+||++
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHHheEE
Confidence 9999999999999999999764211 1235789999999999999999999 7899999999999999
Q ss_pred cCCCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccH
Q 002063 813 DEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDI 891 (973)
Q Consensus 813 ~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~ 891 (973)
+.++.++|+|||.+................++..|+|||++.+..++.++||||+||++|||++ |..||... ..
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~-----~~ 248 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-----PV 248 (307)
T ss_pred cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC-----CH
Confidence 9999999999999876543221111222234578999999998889999999999999999998 88888543 11
Q ss_pred HHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 892 VYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
........ ... ....+......+.+++.+|++.+|++||++.++++.|+++..
T Consensus 249 ~~~~~~~~-~~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~ 301 (307)
T cd05098 249 EELFKLLK-EGH----------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA 301 (307)
T ss_pred HHHHHHHH-cCC----------CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence 11111111 110 011112334568889999999999999999999999988654
No 166
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=5.2e-35 Score=317.40 Aligned_cols=249 Identities=26% Similarity=0.378 Sum_probs=199.5
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
+|++.+.||+|+||.||+|++..+++.||+|++... ...+.+.+|++++++++||||+++++++..++..++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 578889999999999999999988999999988653 23456889999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++++|..+. .+++..+..++.|++.|++|+| +.+++|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~- 148 (279)
T cd06619 82 DGGSLDVYR---------KIPEHVLGRIAVAVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS- 148 (279)
T ss_pred CCCChHHhh---------cCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc-
Confidence 999986542 3577788899999999999999 789999999999999999999999999998755332
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccH--HHHHHHhhcccccchhhccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDI--VYWVSTHLNNHENVLKVLDC 911 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 911 (973)
......|+..|+|||++.+..++.++||||+||++|+|++|+.||.......... ............ .
T Consensus 149 ---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-------~ 218 (279)
T cd06619 149 ---IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDP-------P 218 (279)
T ss_pred ---cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCC-------C
Confidence 1223468999999999998899999999999999999999999997543221111 111111110000 0
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 912 EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 912 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.. .......++.+++.+|++.+|++||++.|++++..
T Consensus 219 ~~---~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~ 255 (279)
T cd06619 219 VL---PVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPF 255 (279)
T ss_pred CC---CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcc
Confidence 00 01123346789999999999999999999998744
No 167
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-38 Score=352.07 Aligned_cols=463 Identities=24% Similarity=0.309 Sum_probs=359.8
Q ss_pred eEEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCc
Q 002063 75 VTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSIN 154 (973)
Q Consensus 75 v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n 154 (973)
++.|+++.|.+-...-+.+...-+|++|||++|.++ ..|..+..+.+|+.|+++.|.|...+.+..++++|++|.|.+|
T Consensus 23 ~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~~vp~s~~~~~~l~~lnL~~n 101 (1081)
T KOG0618|consen 23 LQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIRSVPSSCSNMRNLQYLNLKNN 101 (1081)
T ss_pred HHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHhhCchhhhhhhcchhheeccc
Confidence 666666665544322233444445888888888776 6777788888888888888888777777777888888888877
Q ss_pred ccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccc
Q 002063 155 YFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFP 234 (973)
Q Consensus 155 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p 234 (973)
.+. ..|..+..+.+|+.|+++.|.+. .+|..+..++.+..+..++|... ..++... ++.+++..|.+.+.++
T Consensus 102 ~l~-~lP~~~~~lknl~~LdlS~N~f~--~~Pl~i~~lt~~~~~~~s~N~~~----~~lg~~~-ik~~~l~~n~l~~~~~ 173 (1081)
T KOG0618|consen 102 RLQ-SLPASISELKNLQYLDLSFNHFG--PIPLVIEVLTAEEELAASNNEKI----QRLGQTS-IKKLDLRLNVLGGSFL 173 (1081)
T ss_pred hhh-cCchhHHhhhcccccccchhccC--CCchhHHhhhHHHHHhhhcchhh----hhhcccc-chhhhhhhhhcccchh
Confidence 776 67777888888888888888775 56777777777777888777222 1223322 7777888888887777
Q ss_pred hhhhccccccEEEeecccCCCCCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccc
Q 002063 235 RSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRK 314 (973)
Q Consensus 235 ~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 314 (973)
..+..++. .|+|.+|.+. . ..+.++.+|+.|....|++... .-..++|+.|+.++|.+....+ -..-.+
T Consensus 174 ~~i~~l~~--~ldLr~N~~~-~--~dls~~~~l~~l~c~rn~ls~l----~~~g~~l~~L~a~~n~l~~~~~--~p~p~n 242 (1081)
T KOG0618|consen 174 IDIYNLTH--QLDLRYNEME-V--LDLSNLANLEVLHCERNQLSEL----EISGPSLTALYADHNPLTTLDV--HPVPLN 242 (1081)
T ss_pred cchhhhhe--eeecccchhh-h--hhhhhccchhhhhhhhcccceE----EecCcchheeeeccCcceeecc--cccccc
Confidence 77777766 7888888877 2 3466778888888888887622 1234688899999999884332 233468
Q ss_pred cceeeccccccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEeccc
Q 002063 315 LFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISD 394 (973)
Q Consensus 315 L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~ 394 (973)
|++++++.|+++ .+|++++.+.+|+.|+..+|+|+ .+|..++...++ ..+...+|-...+|.....++.|++|+|..
T Consensus 243 l~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L-~~l~~~~nel~yip~~le~~~sL~tLdL~~ 319 (1081)
T KOG0618|consen 243 LQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSL-VSLSAAYNELEYIPPFLEGLKSLRTLDLQS 319 (1081)
T ss_pred ceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhH-HHHHhhhhhhhhCCCcccccceeeeeeehh
Confidence 999999999999 56799999999999999999996 888888776664 445556677778888889999999999999
Q ss_pred ccccccCCcccc-CCC-CcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCC
Q 002063 395 NHLSGKIPDGLW-ALP-NVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGK 472 (973)
Q Consensus 395 N~l~~~~p~~~~-~l~-~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 472 (973)
|.|. ..|+.+. .+. .|..|+.+.|++...+...-..++.|+.|++.+|.+++..-..+.+...|+.|+|++|++...
T Consensus 320 N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~f 398 (1081)
T KOG0618|consen 320 NNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSF 398 (1081)
T ss_pred cccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccC
Confidence 9998 5555443 344 488899999999877755555677899999999999988888899999999999999999866
Q ss_pred ccccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCccCC-CCCchhhc
Q 002063 473 IPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTG-SIPDNLMK 551 (973)
Q Consensus 473 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~ 551 (973)
....+.++..|+.|+||+|+|+ .+|..+.++..|+.|...+|+|. ..| ++..++.|+.+|||.|+|+. .+|.....
T Consensus 399 pas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~ 475 (1081)
T KOG0618|consen 399 PASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPS 475 (1081)
T ss_pred CHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCC
Confidence 6667889999999999999999 67899999999999999999998 788 79999999999999999983 44554443
Q ss_pred ccCceEEccCCcc
Q 002063 552 LKLSSIDLSENQL 564 (973)
Q Consensus 552 l~L~~l~ls~N~l 564 (973)
-+|++|||++|.+
T Consensus 476 p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 476 PNLKYLDLSGNTR 488 (1081)
T ss_pred cccceeeccCCcc
Confidence 4599999999985
No 168
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=4e-35 Score=319.35 Aligned_cols=267 Identities=27% Similarity=0.360 Sum_probs=199.6
Q ss_pred CCcccCeecccCcEEEEEEEE----cCCCceEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeEeEEEEe--CCeeEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDL----KKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLK--GGSSFL 748 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~----~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~l 748 (973)
+|++.+.||+|+||+||+|.. ..+++.||+|++... ...+.+.+|++++++++||||+++++++.. ....++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 84 (284)
T cd05081 5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRL 84 (284)
T ss_pred cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEE
Confidence 678889999999999999984 356889999987653 334578899999999999999999998754 346899
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++... ...+++..+..++.|++.||+||| +++++||||||+||+++.++.++|+|||+++.
T Consensus 85 v~e~~~~~~L~~~l~~~----~~~l~~~~~~~~~~~l~~aL~~LH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~ 157 (284)
T cd05081 85 VMEYLPYGSLRDYLQKH----RERLDHRKLLLYASQICKGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGLTKV 157 (284)
T ss_pred EEEecCCCCHHHHHHhc----CcCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHhhEEECCCCeEEECCCccccc
Confidence 99999999999999753 235789999999999999999999 78999999999999999999999999999986
Q ss_pred ccCCCCccc-ccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccc---c
Q 002063 829 AENSPKVSD-YSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE---N 904 (973)
Q Consensus 829 ~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~---~ 904 (973)
......... .....++..|+|||++.+..++.++||||+||++|||++|..|+...... ............. .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 234 (284)
T cd05081 158 LPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE---FMRMMGNDKQGQMIVYH 234 (284)
T ss_pred ccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh---hhhhcccccccccchHH
Confidence 643322111 11122345699999998888999999999999999999988776433110 0000000000000 0
Q ss_pred chhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
+.+.+...............+.+++.+||+++|++|||+.||++.|+.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 235 LIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 0000111111111122345688999999999999999999999999875
No 169
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-36 Score=325.08 Aligned_cols=249 Identities=28% Similarity=0.377 Sum_probs=205.5
Q ss_pred cccCeecccCcEEEEEEEEcCCC---ceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 679 EEDNLIGSGGTGKVYRLDLKKNA---GTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 679 ~~~~~lG~G~~g~Vy~a~~~~~~---~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
...++||+|.||.|++|.|...+ ..||||.+... ....+|.+|+.+|.+++|||++++|++..+ ...+||||.
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL 191 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL 191 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence 44577999999999999998533 35999998763 356789999999999999999999999877 678899999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
++.|+|.+.|++ .....+.....+.++.|||.||.||. .++.||||+.++|+++.....|||+|||+++-++..
T Consensus 192 aplGSLldrLrk---a~~~~llv~~Lcdya~QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 192 APLGSLLDRLRK---AKKAILLVSRLCDYAMQIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGEN 265 (1039)
T ss_pred cccchHHHHHhh---ccccceeHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence 999999999986 34567888999999999999999999 889999999999999999999999999999988655
Q ss_pred CCccccc-ccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhcc
Q 002063 833 PKVSDYS-CFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 833 ~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
.....+. ...-...|+|||.++..+++.++|||+|||++|||++ |..||.+-. +.+ +.+.+|
T Consensus 266 ed~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~--g~q--------------IL~~iD 329 (1039)
T KOG0199|consen 266 EDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCR--GIQ--------------ILKNID 329 (1039)
T ss_pred CcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCC--HHH--------------HHHhcc
Confidence 4333222 1234568999999999999999999999999999999 889997541 111 122233
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
..-.-..++.+.+++++++..||...|++|||+..|.+.+
T Consensus 330 ~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 330 AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 2222334567788999999999999999999999997443
No 170
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=7.2e-35 Score=312.94 Aligned_cols=253 Identities=30% Similarity=0.430 Sum_probs=201.5
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccC
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
++|++.+.||+|+||.||+|.... +..||+|.+... ...+.+.+|+.++++++||+++++++++. +...+++|||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~-~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNG-NTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS 83 (260)
T ss_pred HHhhhhheeccccCceEEEEEecC-CceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence 478899999999999999998774 667999988753 34567899999999999999999999875 456899999999
Q ss_pred CCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCC
Q 002063 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~ 834 (973)
+++|.+++... ....+++..+..++.|++.|++||| +++++||||||+||++++++.++|+|||.+........
T Consensus 84 ~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05070 84 KGSLLDFLKDG---EGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY 157 (260)
T ss_pred CCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCceeeeeccCccc
Confidence 99999999753 2345789999999999999999999 78999999999999999999999999999976543221
Q ss_pred cccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhccccc
Q 002063 835 VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 835 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
. ......++..|+|||++.+..++.++||||||+++|||++ |..||.... ..+.... ......
T Consensus 158 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~--~~~~~~~---~~~~~~---------- 221 (260)
T cd05070 158 T-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN--NREVLEQ---VERGYR---------- 221 (260)
T ss_pred c-cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC--HHHHHHH---HHcCCC----------
Confidence 1 1112235678999999988889999999999999999999 899996531 1111111 111100
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
...+......+.+++.+|++++|++|||+.++.+.|++.
T Consensus 222 -~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 260 (260)
T cd05070 222 -MPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLEDY 260 (260)
T ss_pred -CCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence 011123345688999999999999999999999998763
No 171
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.1e-35 Score=325.34 Aligned_cols=260 Identities=28% Similarity=0.398 Sum_probs=205.5
Q ss_pred cCCcccCeecccCcEEEEEEEEcC-------CCceEEEEEeecc---ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCC
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKK-------NAGTVAVKQLWKG---DGVKVFAAEMEILGKI-RHRNILKLYACLLKGG 744 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~-------~~~~vavK~~~~~---~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~ 744 (973)
.+|++.+.||+|+||.||+|++.. .+..||+|.+... ...+++.+|+++++++ +||||+++++++..++
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 368899999999999999998642 1236899987652 3456788999999999 7999999999999999
Q ss_pred eeEEEEEccCCCchHHHHHhhhc-----------CCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeec
Q 002063 745 SSFLVLEYMPNGNLFQALHKRVK-----------EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD 813 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~-----------~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~ 813 (973)
..++||||+++|+|.+++..... .....+++..+..++.|++.|++||| +++++||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA---SQKCIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEc
Confidence 99999999999999999976421 12345788999999999999999999 78999999999999999
Q ss_pred CCCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHH
Q 002063 814 EDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIV 892 (973)
Q Consensus 814 ~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~ 892 (973)
.++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||... +..
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-----~~~ 243 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI-----PVE 243 (334)
T ss_pred CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCC-----CHH
Confidence 999999999999986644322222222334568999999999999999999999999999998 88888643 112
Q ss_pred HHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 893 YWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
........... ..........+.+++.+||+.+|++||++.|++++|+++.
T Consensus 244 ~~~~~~~~~~~-----------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 244 ELFKLLKEGHR-----------MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred HHHHHHHcCCC-----------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 22221111110 0111123456889999999999999999999999999876
No 172
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=4.1e-35 Score=321.23 Aligned_cols=260 Identities=28% Similarity=0.385 Sum_probs=203.2
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCc--eEEEEEeec---cccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAG--TVAVKQLWK---GDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~--~vavK~~~~---~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv 749 (973)
++|++.+.||+|+||.||+|+.+.++. .+++|.++. ....+.+.+|++++.++ +||||+++++++......|+|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 478899999999999999999887654 478887764 23345688999999999 799999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcC-----------CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCce
Q 002063 750 LEYMPNGNLFQALHKRVKE-----------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEP 818 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~-----------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 818 (973)
|||+++|+|.+++...... ....+++..+..++.|++.|++||| +++++||||||+||++++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS---EKQFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCcCCcceEEECCCCeE
Confidence 9999999999999753211 1134788899999999999999999 7899999999999999999999
Q ss_pred EEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHH
Q 002063 819 KIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVST 897 (973)
Q Consensus 819 kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~ 897 (973)
||+|||++...... ........+..|+|||++.+..++.++|||||||++|||++ |..||.... .......
T Consensus 159 kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~-----~~~~~~~ 230 (297)
T cd05089 159 KIADFGLSRGEEVY---VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMT-----CAELYEK 230 (297)
T ss_pred EECCcCCCccccce---eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHH
Confidence 99999998643211 11111223567999999988889999999999999999997 999996541 1111111
Q ss_pred hhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCC
Q 002063 898 HLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCT 957 (973)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 957 (973)
.... .....+......+.+++.+|++.+|.+||++.++++.|+++....
T Consensus 231 ~~~~-----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 231 LPQG-----------YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred HhcC-----------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 1110 000111123456889999999999999999999999998876544
No 173
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=2e-35 Score=317.25 Aligned_cols=252 Identities=26% Similarity=0.352 Sum_probs=209.1
Q ss_pred CcccCeecccCcEEEEEEEEcCC----CceEEEEEeec---cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKKN----AGTVAVKQLWK---GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~~----~~~vavK~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
.+..+.||.|.||.||+|..... .-.||||..+. .++.+.|..|..+++.++||||++++|++.+. ..|+||
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~Wivm 469 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIVM 469 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEEE
Confidence 35678899999999999998632 33589998776 35577899999999999999999999998765 689999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
|.++-|.|..|++.+ ...++......+++||+.||+||| +...|||||.++||||....-+|++|||+++.++
T Consensus 470 EL~~~GELr~yLq~n----k~sL~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~e 542 (974)
T KOG4257|consen 470 ELAPLGELREYLQQN----KDSLPLRTLTLYCYQICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLADFGLSRYLE 542 (974)
T ss_pred ecccchhHHHHHHhc----cccchHHHHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeecCcceeeecccchhhhcc
Confidence 999999999999864 446888888999999999999999 8899999999999999999999999999999887
Q ss_pred CCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhc
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
........ ...-++.|||||.+.-.+++.++|||-|||.+||++. |..||.+-. +.+.+..+-
T Consensus 543 d~~yYkaS-~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvk---------------NsDVI~~iE 606 (974)
T KOG4257|consen 543 DDAYYKAS-RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVK---------------NSDVIGHIE 606 (974)
T ss_pred ccchhhcc-ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccc---------------ccceEEEec
Confidence 66543332 3344678999999999999999999999999999987 999997642 222222222
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
.+ -+...++.+++.++.++.+||+++|.+||++.++.+.|.++.
T Consensus 607 nG-eRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~ 650 (974)
T KOG4257|consen 607 NG-ERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVL 650 (974)
T ss_pred CC-CCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHH
Confidence 22 223446678889999999999999999999999988887643
No 174
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=3.7e-35 Score=325.32 Aligned_cols=241 Identities=28% Similarity=0.347 Sum_probs=191.0
Q ss_pred CeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHH-HHHhcCCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEME-ILGKIRHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~-~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
+.||+|+||+||+|++..+++.||||++... .....+.+|.. +++.++||||+++++++..++..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 4689999999999999999999999998653 12233444544 46789999999999999999999999999999
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++.......
T Consensus 81 g~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~-- 150 (323)
T cd05575 81 GELFFHLQRE-----RSFPEPRARFYAAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS-- 150 (323)
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCC--
Confidence 9999988753 35788889999999999999999 7899999999999999999999999999987432221
Q ss_pred ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccC
Q 002063 836 SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVAS 915 (973)
Q Consensus 836 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||... +............. ..
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~-----~~~~~~~~i~~~~~--------~~-- 215 (323)
T cd05575 151 KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR-----DTAEMYDNILNKPL--------RL-- 215 (323)
T ss_pred CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCC-----CHHHHHHHHHcCCC--------CC--
Confidence 1223356899999999999999999999999999999999999999653 12222222211111 00
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCHH----HHHHH
Q 002063 916 ESIKEDMIKLLKIAVVCTTKLPNLRPPMR----EVVKM 949 (973)
Q Consensus 916 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~----evl~~ 949 (973)
.......+.+++.+|++.||.+||++. +++++
T Consensus 216 --~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~ 251 (323)
T cd05575 216 --KPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNH 251 (323)
T ss_pred --CCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcC
Confidence 112245678899999999999999984 55543
No 175
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=7.1e-35 Score=314.53 Aligned_cols=255 Identities=27% Similarity=0.431 Sum_probs=203.1
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCc---eEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAG---TVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~---~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
.+|+..+.||+|+||.||+|+...+++ .||+|.+... ...+.+.+|++++++++|||++++++++...+..|+|
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII 84 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence 467888999999999999999876554 7999987653 2345688999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++++|.+++... ...+++..+..++.|++.|++|+| +.+++||||||+||+++.++.++++|||++...
T Consensus 85 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 157 (268)
T cd05063 85 TEYMENGALDKYLRDH----DGEFSSYQLVGMLRGIAAGMKYLS---DMNYVHRDLAARNILVNSNLECKVSDFGLSRVL 157 (268)
T ss_pred EEcCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEEcCCCcEEECCCccceec
Confidence 9999999999998753 245789999999999999999999 789999999999999999999999999998766
Q ss_pred cCCCCcc-cccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 830 ENSPKVS-DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 830 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
....... .......+..|+|||++.+..++.++|||||||++||+++ |+.||.... .. ...........
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~--~~---~~~~~i~~~~~---- 228 (268)
T cd05063 158 EDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMS--NH---EVMKAINDGFR---- 228 (268)
T ss_pred ccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCC--HH---HHHHHHhcCCC----
Confidence 4322111 1111223467999999988889999999999999999997 999996431 11 11111111000
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
.....+....+.+++.+||+.+|++||++.+|++.|+++
T Consensus 229 -------~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 229 -------LPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred -------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 001112345688999999999999999999999999875
No 176
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=3.7e-35 Score=327.90 Aligned_cols=262 Identities=29% Similarity=0.394 Sum_probs=200.8
Q ss_pred cCCcccCeecccCcEEEEEEEEc-----CCCceEEEEEeecc---ccHHHHHHHHHHHHhc-CCCceeeEeEEEEe-CCe
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLK-----KNAGTVAVKQLWKG---DGVKVFAAEMEILGKI-RHRNILKLYACLLK-GGS 745 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~-----~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~-~~~ 745 (973)
++|++.+.||+|+||+||+|++. .+++.||||++... .....+.+|+.++.++ +||||+++++++.. +..
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 47899999999999999999853 45778999998653 2345678899999999 68999999998765 456
Q ss_pred eEEEEEccCCCchHHHHHhhhcC---------------------------------------------------------
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKE--------------------------------------------------------- 768 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~--------------------------------------------------------- 768 (973)
.++||||+++|+|.+++......
T Consensus 87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (343)
T cd05103 87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 166 (343)
T ss_pred eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence 79999999999999999753110
Q ss_pred -----CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcccccccCc
Q 002063 769 -----GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAG 843 (973)
Q Consensus 769 -----~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~g 843 (973)
....+++..+..++.|+++|++||| +++++||||||+||+++.++.+|++|||++................+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 243 (343)
T cd05103 167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARL 243 (343)
T ss_pred hhhhhhhccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCC
Confidence 0123678888999999999999999 78999999999999999999999999999876533222112222345
Q ss_pred ccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhhHHHH
Q 002063 844 THGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDM 922 (973)
Q Consensus 844 t~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (973)
+..|+|||++.+..++.++||||||+++|||++ |..||...... ..... ........ ..+....
T Consensus 244 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~~~~----~~~~~~~~----------~~~~~~~ 308 (343)
T cd05103 244 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCR----RLKEGTRM----------RAPDYTT 308 (343)
T ss_pred CcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc-HHHHH----HHhccCCC----------CCCCCCC
Confidence 678999999988899999999999999999997 99998653211 11111 11111100 0001122
Q ss_pred HHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 923 IKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 923 ~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
.++.+++..||+.+|++||++.||+++|+.+..
T Consensus 309 ~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 309 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 457889999999999999999999999987643
No 177
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=2.9e-35 Score=331.34 Aligned_cols=254 Identities=24% Similarity=0.312 Sum_probs=200.2
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
..++|++.+.||+|+||.||+|+++.+++.||+|++.+. ...+.+.+|+.+++.++||||+++++++..++..|+
T Consensus 41 ~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (371)
T cd05622 41 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYM 120 (371)
T ss_pred chhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence 357899999999999999999999999999999998652 234457789999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++... .++...+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++..
T Consensus 121 v~Ey~~gg~L~~~~~~~------~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~ 191 (371)
T cd05622 121 VMEYMPGGDLVNLMSNY------DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 191 (371)
T ss_pred EEcCCCCCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHEEECCCCCEEEEeCCceeE
Confidence 99999999999998743 3677788889999999999999 88999999999999999999999999999986
Q ss_pred ccCCCCcccccccCcccccccccccccC----CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccccc
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTC----KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||... +..............
T Consensus 192 ~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~-----~~~~~~~~i~~~~~~ 265 (371)
T cd05622 192 MNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD-----SLVGTYSKIMNHKNS 265 (371)
T ss_pred cCcCCc-ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCC-----CHHHHHHHHHcCCCc
Confidence 643221 112235699999999998654 3788999999999999999999999753 111122221111110
Q ss_pred chhhccccccChhhHHHHHHHHHHHHHhcCCCCCC--CCCHHHHHHHh
Q 002063 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNL--RPPMREVVKML 950 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rpt~~evl~~L 950 (973)
..+ .........+.+++..|++..+.+ |+++.|+++|.
T Consensus 266 -~~~-------~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 266 -LTF-------PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred -ccC-------CCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 000 111233456778899999844443 78999999875
No 178
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=6.9e-35 Score=312.09 Aligned_cols=249 Identities=22% Similarity=0.335 Sum_probs=202.5
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeec---cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK---GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
+|++.+.||+|+||.||++++..+++.||+|.+.. ....+.+.+|+.++++++||||+++++++..++..|+||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 47888999999999999999999999999998754 234567788999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++|+|.+++... ....++......++.|++.|++||| +++++|+||||+||++++++.++++|||.+.......
T Consensus 81 ~~~~l~~~~~~~---~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 154 (255)
T cd08219 81 DGGDLMQKIKLQ---RGKLFPEDTILQWFVQMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG 154 (255)
T ss_pred CCCcHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEEcccCcceeecccc
Confidence 999999988643 2334788889999999999999999 7899999999999999999999999999987654322
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
. ......|+..|+|||++.+..++.++||||+|+++|+|++|+.||... +.............
T Consensus 155 ~--~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~-----~~~~~~~~~~~~~~---------- 217 (255)
T cd08219 155 A--YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQAN-----SWKNLILKVCQGSY---------- 217 (255)
T ss_pred c--ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCC-----CHHHHHHHHhcCCC----------
Confidence 1 112346888999999999888999999999999999999999999653 11111111111100
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
..........+.+++.+||+.||++||++.+++..
T Consensus 218 -~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 218 -KPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred -CCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 00111234467889999999999999999999864
No 179
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=8.7e-35 Score=316.33 Aligned_cols=251 Identities=25% Similarity=0.316 Sum_probs=200.7
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
.|+..+.||+|+||+||+|.+..+++.||||.+... .....+.+|+.++++++|++++++++.+.+++..++|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 367778899999999999999999999999988652 123456789999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|+++++|.+++... ....+++..+..++.|++.|++|+| +.+++||||||+||+++.++.++|+|||++.....
T Consensus 81 ~~~g~~L~~~l~~~---~~~~l~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 154 (285)
T cd05630 81 LMNGGDLKFHIYHM---GEAGFEEGRAVFYAAEICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 154 (285)
T ss_pred ecCCCcHHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeccceeecCC
Confidence 99999999988653 2235788899999999999999999 78999999999999999999999999999875532
Q ss_pred CCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccc
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDC 911 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
... .....|+..|+|||++.+..++.++||||+||++|||++|+.||........ ............ .
T Consensus 155 ~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~--~~~~~~~~~~~~-------~ 222 (285)
T cd05630 155 GQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK--REEVERLVKEVQ-------E 222 (285)
T ss_pred Ccc---ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch--HHHHHhhhhhhh-------h
Confidence 211 1234689999999999998999999999999999999999999975421110 001111100000 0
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHH
Q 002063 912 EVASESIKEDMIKLLKIAVVCTTKLPNLRPP-----MREVVKM 949 (973)
Q Consensus 912 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-----~~evl~~ 949 (973)
.........+.+++.+||+.||++||+ +.|+++|
T Consensus 223 ----~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 223 ----EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred ----hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 011123345788999999999999999 8899875
No 180
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=6.5e-35 Score=323.61 Aligned_cols=247 Identities=24% Similarity=0.350 Sum_probs=195.5
Q ss_pred CeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
+.||+|+||+||+|+...+++.||||++.+. ...+.+.+|+.++.++ +||+|+++++++...+..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999999999999999998763 2345578899999888 699999999999999999999999999
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
|+|.+++... ..+++..+..++.|++.|++||| +++++||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~L~~~~~~~-----~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-- 150 (327)
T cd05617 81 GDLMFHMQRQ-----RKLPEEHARFYAAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG-- 150 (327)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCC--
Confidence 9999888643 35889999999999999999999 7899999999999999999999999999987432211
Q ss_pred ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCC-CccHHHHHHHhhcccccchhhcccccc
Q 002063 836 SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGD-GKDIVYWVSTHLNNHENVLKVLDCEVA 914 (973)
Q Consensus 836 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (973)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ................ .
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---------~- 220 (327)
T cd05617 151 DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKP---------I- 220 (327)
T ss_pred CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCC---------C-
Confidence 1122356899999999999999999999999999999999999999643211 1111111111111111 0
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCCCCCCCH------HHHHHH
Q 002063 915 SESIKEDMIKLLKIAVVCTTKLPNLRPPM------REVVKM 949 (973)
Q Consensus 915 ~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~------~evl~~ 949 (973)
..+......+.+++.+|++.||.+|+++ .++.+|
T Consensus 221 -~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 221 -RIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred -CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 0111223457789999999999999984 577665
No 181
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=5.5e-35 Score=317.37 Aligned_cols=258 Identities=25% Similarity=0.365 Sum_probs=202.1
Q ss_pred cCCcccCeecccCcEEEEEEEEc-----CCCceEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLK-----KNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~-----~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
.+|...++||+|+||+||+|... .++..||+|.+... .....+.+|++++++++||||+++++++..++..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 46678899999999999999753 34668999987652 345678999999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcC----------CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCce
Q 002063 749 VLEYMPNGNLFQALHKRVKE----------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEP 818 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 818 (973)
||||+++|+|.+++...... ....+++..+..++.|++.|++||| +.+++||||||+||++++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA---SLHFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH---HCCeecccccHhhEEEcCCCCE
Confidence 99999999999999764211 1135789999999999999999999 7899999999999999999999
Q ss_pred EEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHH
Q 002063 819 KIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVST 897 (973)
Q Consensus 819 kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~ 897 (973)
+|+|||++................+++.|+|||++.+..++.++|||||||++|||++ |+.||..... .+. ...
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~---~~~ 236 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN--TEA---IEC 236 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH--HHH---HHH
Confidence 9999999875543222111222345678999999998899999999999999999998 9999864311 111 111
Q ss_pred hhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 898 HLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
...... ...+......+.+++.+||+.||++||++.||.+.|+.
T Consensus 237 ~~~~~~-----------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 237 ITQGRE-----------LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HHcCcc-----------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 111100 00111233457899999999999999999999998863
No 182
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=9.5e-35 Score=311.97 Aligned_cols=253 Identities=27% Similarity=0.403 Sum_probs=202.1
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec-cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.++|++.++||+|+||.||+|.... ++.||+|.+.. ....+++.+|+.++++++||||+++++++. .+..+++|||+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~-~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNG-HTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYM 82 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCC-CceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcC
Confidence 3578899999999999999999765 77899998876 344567899999999999999999999864 55789999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++++|.+++... ....+++..+..++.|++.|++||| +.+++||||||+||++++++.++++|||++.......
T Consensus 83 ~~~~L~~~~~~~---~~~~~~~~~~~~i~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05067 83 ENGSLVDFLKTP---EGIKLTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNE 156 (260)
T ss_pred CCCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHHhEEEcCCCCEEEccCcceeecCCCC
Confidence 999999998653 2346789999999999999999999 7899999999999999999999999999987654221
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
. .......++..|+|||++.+..++.++||||||+++||+++ |+.||.... ......... ....
T Consensus 157 ~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~~~~~~~---~~~~--------- 221 (260)
T cd05067 157 Y-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT--NPEVIQNLE---RGYR--------- 221 (260)
T ss_pred c-ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC--hHHHHHHHH---cCCC---------
Confidence 1 11122345678999999988889999999999999999999 999996531 111111111 1000
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
.........++.+++.+|++.+|++||+++++.+.|+.
T Consensus 222 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 222 --MPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred --CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 00111223468899999999999999999999999875
No 183
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=7.6e-35 Score=314.38 Aligned_cols=255 Identities=25% Similarity=0.312 Sum_probs=191.9
Q ss_pred CeecccCcEEEEEEEEcC--CCceEEEEEeeccc---cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCC
Q 002063 682 NLIGSGGTGKVYRLDLKK--NAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNG 756 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~--~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 756 (973)
+.||+|+||.||+|.... ++..+|+|.+.... ....+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 368999999999998753 35679999876532 3346888999999999999999999999988999999999999
Q ss_pred chHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcc
Q 002063 757 NLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVS 836 (973)
Q Consensus 757 sL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 836 (973)
+|.+++...........++..+..++.|++.|++|+| +.+++||||||+||+++.++.++++|||.+..........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 9999997643323335677788889999999999999 7899999999999999999999999999987543332222
Q ss_pred cccccCcccccccccccccC-------CCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhh
Q 002063 837 DYSCFAGTHGYIAPELAYTC-------KVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 837 ~~~~~~gt~~y~aPE~~~~~-------~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
......++..|+|||++.+. .++.++||||||+++|||++ |+.||..... ....... .... ....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~--~~~~~~~---~~~~--~~~~ 230 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSD--EQVLTYT---VREQ--QLKL 230 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCCh--HHHHHHH---hhcc--cCCC
Confidence 22234577889999998532 35789999999999999996 9999965321 1111111 0000 0111
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.++... ....+.+.+++..|+ .+|++||+++||++.|+
T Consensus 231 ~~~~~~----~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 231 PKPRLK----LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCccC----CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 111111 112334677888999 68999999999998875
No 184
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1e-34 Score=316.80 Aligned_cols=262 Identities=21% Similarity=0.211 Sum_probs=195.7
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhc---CCCceeeEeEEEEe-----CC
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKI---RHRNILKLYACLLK-----GG 744 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l---~hpniv~l~~~~~~-----~~ 744 (973)
+|++.+.||+|+||+||+|++..+++.||+|.+... .....+.+|+++++++ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 478889999999999999999999999999988642 1233456777777665 79999999998864 34
Q ss_pred eeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEeccc
Q 002063 745 SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFG 824 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 824 (973)
..++||||++ ++|.+++... ....+++..+..++.|++.||+|+| +.+++||||||+||+++.++.+||+|||
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~kl~dfg 153 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKV---PPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGQVKLADFG 153 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccC
Confidence 5799999996 5898888753 2345889999999999999999999 7899999999999999999999999999
Q ss_pred CCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhc-ccc
Q 002063 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLN-NHE 903 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~-~~~ 903 (973)
++....... ......|+..|+|||++.+..++.++||||+||++|||++|+.||...... ............ ...
T Consensus 154 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~ 229 (288)
T cd07863 154 LARIYSCQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDLIGLPPED 229 (288)
T ss_pred ccccccCcc---cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH-HHHHHHHHHhCCCChh
Confidence 997654322 122346789999999999889999999999999999999999999653211 111111110000 000
Q ss_pred cch-------hhccccc---cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 904 NVL-------KVLDCEV---ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 904 ~~~-------~~~~~~~---~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
... ....... ......+...++.+++.+|+++||++||++.|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 230 DWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred hCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000 0000000 001112334567899999999999999999999865
No 185
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.4e-35 Score=323.56 Aligned_cols=262 Identities=27% Similarity=0.396 Sum_probs=204.6
Q ss_pred cCCcccCeecccCcEEEEEEEEc-------CCCceEEEEEeecc---ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCC
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLK-------KNAGTVAVKQLWKG---DGVKVFAAEMEILGKI-RHRNILKLYACLLKGG 744 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~-------~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~ 744 (973)
.+|.+.+.||+|+||.||+|+.. .....||+|.+... .....+.+|+++++++ +||||+++++++..++
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 47788999999999999999863 23457999987753 2345678899999999 6999999999999989
Q ss_pred eeEEEEEccCCCchHHHHHhhhc-----------CCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeec
Q 002063 745 SSFLVLEYMPNGNLFQALHKRVK-----------EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD 813 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~-----------~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~ 813 (973)
..|+||||+++|+|.+++..... .....+++..+..++.|++.|++|+| +++++||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE---SRRCIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeeccccceeEEEc
Confidence 99999999999999999976421 11245889999999999999999999 78999999999999999
Q ss_pred CCCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHH
Q 002063 814 EDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIV 892 (973)
Q Consensus 814 ~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~ 892 (973)
.++.+||+|||.++...............++..|+|||++.+..++.++|||||||++|||++ |..||.... .....
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~--~~~~~ 246 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIP--VEELF 246 (314)
T ss_pred CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCC--HHHHH
Confidence 999999999999986643222111222234567999999998889999999999999999999 889985431 11111
Q ss_pred HHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCC
Q 002063 893 YWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPC 956 (973)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 956 (973)
.... ... . ...+.....++.+++.+|++.+|++||++.++++.|.++...
T Consensus 247 ~~~~----~~~-~---------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 247 KLLR----EGH-R---------MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred HHHH----cCC-C---------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence 1111 110 0 001112234677899999999999999999999999987643
No 186
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.2e-34 Score=320.75 Aligned_cols=200 Identities=26% Similarity=0.388 Sum_probs=164.5
Q ss_pred cCeecccCcEEEEEEEEc--CCCceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEEEEe--CCeeEEEEEccCCC
Q 002063 681 DNLIGSGGTGKVYRLDLK--KNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLK--GGSSFLVLEYMPNG 756 (973)
Q Consensus 681 ~~~lG~G~~g~Vy~a~~~--~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~lv~e~~~~g 756 (973)
.++||+|+||+||+|+++ .+++.||+|++........+.+|++++++++||||+++++++.. +...|+||||++ +
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~ 84 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-H 84 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-C
Confidence 467999999999999976 35788999998766555667899999999999999999998854 456899999995 5
Q ss_pred chHHHHHhhhcC----CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeee----cCCCceEEecccCCcc
Q 002063 757 NLFQALHKRVKE----GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL----DEDYEPKIADFGVAKI 828 (973)
Q Consensus 757 sL~~~l~~~~~~----~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill----~~~~~~kl~Dfgl~~~ 828 (973)
+|.+++...... ....+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++.
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07868 85 DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence 888887643211 1235788899999999999999999 7899999999999999 4567899999999986
Q ss_pred ccCCCC-cccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcc
Q 002063 829 AENSPK-VSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEE 884 (973)
Q Consensus 829 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~ 884 (973)
...... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred cCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 643321 1222345789999999998764 5889999999999999999999999754
No 187
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=6.8e-35 Score=315.43 Aligned_cols=252 Identities=27% Similarity=0.381 Sum_probs=199.5
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec-cccHHHHHHHHHHHHhc-CCCceeeEeEEEEeC------Cee
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-GDGVKVFAAEMEILGKI-RHRNILKLYACLLKG------GSS 746 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~-~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~------~~~ 746 (973)
.+.|++.+.||+|+||+||+|+...+++.||+|++.. ......+.+|+.+++++ +||||+++++++... ...
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQL 84 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEE
Confidence 4578888999999999999999999899999998865 34456788999999998 799999999998753 468
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
|+||||+++|+|.+++... ....+++..+..++.|++.|++||| +++++||||+|+||++++++.++|+|||++
T Consensus 85 ~iv~e~~~~~~L~~~l~~~---~~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~l~Dfg~~ 158 (272)
T cd06637 85 WLVMEFCGAGSVTDLIKNT---KGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVS 158 (272)
T ss_pred EEEEEcCCCCcHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEEEccCCCc
Confidence 9999999999999998753 2345789999999999999999999 789999999999999999999999999998
Q ss_pred ccccCCCCcccccccCcccccccccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcc
Q 002063 827 KIAENSPKVSDYSCFAGTHGYIAPELAY-----TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNN 901 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 901 (973)
....... .......|+..|+|||++. +..++.++||||+||++|||++|+.||..... ..... .....
T Consensus 159 ~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~----~~~~~-~~~~~ 231 (272)
T cd06637 159 AQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP----MRALF-LIPRN 231 (272)
T ss_pred eeccccc--ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCH----HHHHH-HHhcC
Confidence 7654321 1223356889999999985 34578899999999999999999999964311 11110 00000
Q ss_pred cccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 902 HENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
. .... ........+.+++.+||+.+|.+||++.+++++
T Consensus 232 ~-------~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 232 P-------APRL---KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred C-------CCCC---CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 0 0000 111233467899999999999999999999875
No 188
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=5.6e-35 Score=315.51 Aligned_cols=255 Identities=26% Similarity=0.435 Sum_probs=203.0
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCc---eEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAG---TVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~---~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
.+|++.+.||+|+||.||+|....+++ .||||++... ....++.+|++++++++||||+++++++..+...++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 457889999999999999999986654 5999988653 2356788999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++|+|.+++... ...+++..+..++.|++.|++||| +.+++||||||+||+++.++.++++|||++...
T Consensus 84 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~ 156 (269)
T cd05065 84 TEFMENGALDSFLRQN----DGQFTVIQLVGMLRGIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFL 156 (269)
T ss_pred EecCCCCcHHHHHhhC----CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccChheEEEcCCCcEEECCCcccccc
Confidence 9999999999998753 235789999999999999999999 789999999999999999999999999998765
Q ss_pred cCCCCcccccc-c--CcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccc
Q 002063 830 ENSPKVSDYSC-F--AGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 830 ~~~~~~~~~~~-~--~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
........... . ..+..|+|||++.+..++.++||||+||++||+++ |..||... ...+...++. ....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~--~~~~~~~~i~---~~~~-- 229 (269)
T cd05065 157 EDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM--SNQDVINAIE---QDYR-- 229 (269)
T ss_pred ccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCC--CHHHHHHHHH---cCCc--
Confidence 43322111111 1 12457999999998899999999999999999886 99999653 1112222211 1000
Q ss_pred hhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
.....+.+..+.+++.+||+.+|++||++.++++.|+.+
T Consensus 230 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 230 ---------LPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ---------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 001122345678899999999999999999999998764
No 189
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=1.2e-37 Score=333.56 Aligned_cols=363 Identities=27% Similarity=0.425 Sum_probs=207.7
Q ss_pred CCCCCEEeccCcccC-CccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCe
Q 002063 143 LKNLEIFDLSINYFT-GRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGT 221 (973)
Q Consensus 143 l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 221 (973)
|+-.+-.|+++|.|+ +.+|..+..+++++.|.|....+. .+|+.++.+.+|++|.+++|++. .+...++.|+.|+.
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~--~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRs 82 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE--QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRS 82 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh--hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHH
Confidence 444555677888777 467777777777777777776664 56777777777777777777777 45556667777777
Q ss_pred eecccccccc-ccchhhhccccccEEEeecccCCCCCCccccccccccEEEeeccccccccCCc-cCCCCCccEEEcccC
Q 002063 222 LDICRNKISG-EFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEE-IGNLKNLTVFQCFKN 299 (973)
Q Consensus 222 L~L~~n~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~l~~N 299 (973)
+++.+|++.. -+|..+.++..|+.|+|++|+++ +.|..+..-.++-.|+||+|+|. .||.. +.+|+.|-.|+|++|
T Consensus 83 v~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~N 160 (1255)
T KOG0444|consen 83 VIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNN 160 (1255)
T ss_pred HhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccc
Confidence 7777776642 35666666666666666666666 56666666666666666666665 44443 345555556666666
Q ss_pred CCCCCCCCCcCCccccceeeccccccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCC
Q 002063 300 NFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPN 379 (973)
Q Consensus 300 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~ 379 (973)
++. .+|..+..+..|++|.|++|.+...--..+..+++|+.|.+++.+-+ ...+|.
T Consensus 161 rLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRT-----------------------l~N~Pt 216 (1255)
T KOG0444|consen 161 RLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRT-----------------------LDNIPT 216 (1255)
T ss_pred hhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccch-----------------------hhcCCC
Confidence 655 34444555555555555555544322223333444444444443322 124566
Q ss_pred cccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCC
Q 002063 380 SYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNL 459 (973)
Q Consensus 380 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L 459 (973)
++..+.+|..+|||.|.+. ++|+.+..+++|+.|+||+|+|+..... .+.-.+|++|+||+|+++ .+|++++.+++|
T Consensus 217 sld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~iteL~~~-~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL 293 (1255)
T KOG0444|consen 217 SLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITELNMT-EGEWENLETLNLSRNQLT-VLPDAVCKLTKL 293 (1255)
T ss_pred chhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCceeeeecc-HHHHhhhhhhccccchhc-cchHHHhhhHHH
Confidence 6777777777777777776 7777777777777777776666533221 122334455555555554 445555555555
Q ss_pred CEEecCCCcCCC-CccccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCC
Q 002063 460 ERLILTNNNFSG-KIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSG 538 (973)
Q Consensus 460 ~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 538 (973)
+.|++.+|+++- -+|..++.+.+|+.+..++|++. .+|..++.|.+|+.|.|++|++- .+|+.+.-++.|+.|||..
T Consensus 294 ~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlre 371 (1255)
T KOG0444|consen 294 TKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRE 371 (1255)
T ss_pred HHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccC
Confidence 555555554431 13444444444444444444444 44444444444444444444444 3444444444444444444
Q ss_pred C
Q 002063 539 N 539 (973)
Q Consensus 539 N 539 (973)
|
T Consensus 372 N 372 (1255)
T KOG0444|consen 372 N 372 (1255)
T ss_pred C
Confidence 4
No 190
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.1e-34 Score=310.78 Aligned_cols=251 Identities=25% Similarity=0.359 Sum_probs=206.7
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
++|+..+.||+|+||.||+|+...+++.||+|.+......+++.+|++++++++||||+++++++..+...|+++||+++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~ 82 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGA 82 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCC
Confidence 47889999999999999999999888999999987765577899999999999999999999999999999999999999
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
++|.+++... ...+++..+..++.|++.|++||| +.+++||||+|+||+++.++.++|+|||++........
T Consensus 83 ~~L~~~l~~~----~~~l~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~- 154 (256)
T cd06612 83 GSVSDIMKIT----NKTLTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA- 154 (256)
T ss_pred CcHHHHHHhC----ccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEcccccchhcccCcc-
Confidence 9999998643 346789999999999999999999 78999999999999999999999999999886644321
Q ss_pred ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccC
Q 002063 836 SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVAS 915 (973)
Q Consensus 836 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
......++..|+|||++.+..++.++||||+|+++|+|++|+.||...... . ......... ....
T Consensus 155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~--~---~~~~~~~~~---------~~~~ 219 (256)
T cd06612 155 -KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPM--R---AIFMIPNKP---------PPTL 219 (256)
T ss_pred -ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchh--h---hhhhhccCC---------CCCC
Confidence 222345788999999999889999999999999999999999999753211 0 000000000 0001
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 916 ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 916 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.........+.+++.+|++.+|++||++.|++++
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 220 SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 1122334568899999999999999999999875
No 191
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=4.3e-35 Score=329.49 Aligned_cols=263 Identities=26% Similarity=0.267 Sum_probs=199.2
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeC-----
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKG----- 743 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~----- 743 (973)
...++|++.+.||+|+||.||+|++..+++.||||++... .....+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 3567999999999999999999999988999999988652 2345677899999999999999999988643
Q ss_pred -CeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEec
Q 002063 744 -GSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIAD 822 (973)
Q Consensus 744 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 822 (973)
...|+||||+++ ++.+++.. .+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~~-------~l~~~~~~~~~~qi~~aL~~LH---~~givHrDikp~Nill~~~~~~kl~D 162 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILD 162 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEECCCCCEEEee
Confidence 357999999964 67666643 3678888999999999999999 78999999999999999999999999
Q ss_pred ccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHH--------
Q 002063 823 FGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYW-------- 894 (973)
Q Consensus 823 fgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~-------- 894 (973)
||+++...... ......||..|+|||++.+..++.++||||+||++|||++|+.||...... ......
T Consensus 163 fg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~ 238 (355)
T cd07874 163 FGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIEQLGTPC 238 (355)
T ss_pred CcccccCCCcc---ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCC
Confidence 99997553321 122346899999999999989999999999999999999999999653210 000000
Q ss_pred ----------HHHhhcccccchhhcccc------c--cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 895 ----------VSTHLNNHENVLKVLDCE------V--ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 895 ----------~~~~~~~~~~~~~~~~~~------~--~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
+...............+. . ...........+.+++.+|++.||++|||+.|++++-
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp 312 (355)
T cd07874 239 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHP 312 (355)
T ss_pred HHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCc
Confidence 000000000000000000 0 0001112235678999999999999999999999973
No 192
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.2e-34 Score=315.26 Aligned_cols=250 Identities=25% Similarity=0.301 Sum_probs=199.9
Q ss_pred CcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
|+..+.||+|+||+||+|.+..+++.||+|.+... .....+.+|++++++++|++|+++.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 66778899999999999999999999999988653 2234567899999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
+++++|.+++... ....+++..+..++.|++.||.||| +.+|+||||||+||++++++.++|+|||++......
T Consensus 82 ~~~~~L~~~~~~~---~~~~~~~~~~~~~~~ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 155 (285)
T cd05632 82 MNGGDLKFHIYNM---GNPGFEEERALFYAAEILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG 155 (285)
T ss_pred ccCccHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC
Confidence 9999999888643 2345899999999999999999999 789999999999999999999999999998754322
Q ss_pred CCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
. ......|+..|+|||++.+..++.++|+||+||++|||++|+.||..... ......+........ .
T Consensus 156 ~---~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~--~~~~~~~~~~~~~~~-------~- 222 (285)
T cd05632 156 E---SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKE--KVKREEVDRRVLETE-------E- 222 (285)
T ss_pred C---cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHhhhccc-------c-
Confidence 1 12234689999999999988999999999999999999999999975311 100111111111110 0
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHH
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPP-----MREVVKM 949 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-----~~evl~~ 949 (973)
.........+.+++.+|++.||++||+ +.+++++
T Consensus 223 ---~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 223 ---VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred ---ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 011123345788999999999999999 6777765
No 193
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=8.7e-35 Score=321.99 Aligned_cols=240 Identities=26% Similarity=0.337 Sum_probs=193.1
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcC-CCceeeEeEEEEeCCeeEEEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIR-HRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~ 750 (973)
+|+..+.||+|+||+||+|+++.+++.||||++.+. ...+.+..|.++++.+. |++|+++++++..++..|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 467889999999999999999999999999998752 23445678888888885 577888999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++|+|.+++... ..+++..+..++.|++.||+||| +++++||||||+||+++.++.+||+|||+++...
T Consensus 81 Ey~~~g~L~~~i~~~-----~~l~~~~~~~i~~qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~ 152 (323)
T cd05615 81 EYVNGGDLMYHIQQV-----GKFKEPQAVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHM 152 (323)
T ss_pred cCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeccccccccC
Confidence 999999999988753 35889999999999999999999 7899999999999999999999999999987542
Q ss_pred CCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcc
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..............
T Consensus 153 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~-----~~~~~~~i~~~~~~------ 219 (323)
T cd05615 153 VDGV--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED-----EDELFQSIMEHNVS------ 219 (323)
T ss_pred CCCc--cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCCC------
Confidence 2211 1223468999999999998899999999999999999999999997541 11111111111110
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCH
Q 002063 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPM 943 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~ 943 (973)
.+......+.+++.+|++.+|.+|++.
T Consensus 220 ------~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 220 ------YPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred ------CCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 111223467889999999999999974
No 194
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.6e-34 Score=310.22 Aligned_cols=252 Identities=29% Similarity=0.418 Sum_probs=200.3
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccC
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
++|++.+.||+|++|.||+|.+... ..||+|.+... ...+.+.+|++++++++|||++++++++. ++..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 4578889999999999999998764 46999987653 34467889999999999999999998875 456899999999
Q ss_pred CCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCC
Q 002063 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~ 834 (973)
+|+|.+++... ....+++..+..++.|++.|++||| +.+++||||||+||++++++.++|+|||.+........
T Consensus 84 ~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05069 84 KGSLLDFLKEG---DGKYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY 157 (260)
T ss_pred CCCHHHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCCccceEccCCcc
Confidence 99999999753 2335789999999999999999999 78999999999999999999999999999976543321
Q ss_pred cccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhccccc
Q 002063 835 VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 835 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
. ......++..|+|||+..+..++.++||||||+++|||++ |+.||.... ....... ......
T Consensus 158 ~-~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~~~---~~~~~~---------- 221 (260)
T cd05069 158 T-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMV--NREVLEQ---VERGYR---------- 221 (260)
T ss_pred c-ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHH---HHcCCC----------
Confidence 1 1112345678999999988889999999999999999999 899996531 1111111 111000
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
..........+.+++.+||+++|++||+++++++.|++
T Consensus 222 -~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 222 -MPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred -CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 01112334568899999999999999999999999876
No 195
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.4e-34 Score=310.02 Aligned_cols=250 Identities=31% Similarity=0.458 Sum_probs=204.3
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecccc-HHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDG-VKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~-~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
..+|++.+.||+|+||.||+|... ++.||||.+..... .+++.+|+.++++++|+||+++++++..+...++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 357888999999999999999876 78999999877543 667889999999999999999999999899999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++++|.+++... ....+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|+|||.++......
T Consensus 83 ~~~~L~~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~ 156 (256)
T cd05039 83 AKGSLVDYLRSR---GRAVITLAQQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ 156 (256)
T ss_pred CCCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCccchhcccceEEEeCCCCEEEccccccccccccc
Confidence 999999999753 2235899999999999999999999 7899999999999999999999999999997663221
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
. ....+..|+|||++.+..++.++||||+|+++||+++ |+.||.... ..+....+. ...
T Consensus 157 ~-----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--~~~~~~~~~----~~~--------- 216 (256)
T cd05039 157 D-----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--LKDVVPHVE----KGY--------- 216 (256)
T ss_pred c-----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHh----cCC---------
Confidence 1 2234668999999988889999999999999999997 999986431 111111111 110
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
....+...+..+.+++.+|++.+|++||++.|++++|+.+
T Consensus 217 -~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 217 -RMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred -CCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 0011122345688999999999999999999999999753
No 196
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-34 Score=325.68 Aligned_cols=192 Identities=27% Similarity=0.406 Sum_probs=165.7
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccC
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
..+|++.+.||+|+||+||+|++..+++.||+|+..... ...|+.++++++||||+++++++..+...++||||+
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~- 139 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT----TLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY- 139 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc----cHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEcc-
Confidence 347999999999999999999999889999999754332 356999999999999999999999999999999999
Q ss_pred CCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCC
Q 002063 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~ 834 (973)
.++|.+++... ...+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++......
T Consensus 140 ~~~l~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~- 211 (357)
T PHA03209 140 SSDLYTYLTKR----SRPLPIDQALIIEKQILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP- 211 (357)
T ss_pred CCcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEecCccccccccCc-
Confidence 56888888653 345889999999999999999999 7899999999999999999999999999987432221
Q ss_pred cccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCC
Q 002063 835 VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPV 881 (973)
Q Consensus 835 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf 881 (973)
......||..|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 212 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 212 --AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred --ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 122346899999999999999999999999999999999855444
No 197
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=9e-35 Score=313.93 Aligned_cols=252 Identities=30% Similarity=0.433 Sum_probs=199.0
Q ss_pred CeecccCcEEEEEEEEcCCC------ceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 682 NLIGSGGTGKVYRLDLKKNA------GTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~------~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
+.||+|+||.||+|+..... +.||||.+... .....+.+|+++++.++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 36899999999999986533 67999987653 3456788999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcC--CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCC-----ceEEecccC
Q 002063 753 MPNGNLFQALHKRVKE--GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY-----EPKIADFGV 825 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~--~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-----~~kl~Dfgl 825 (973)
+++++|.+++...... ....+++.++..++.|++.|++|+| +.+++|+||||+||+++.++ .++++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 9999999999764322 2344788999999999999999999 78999999999999999877 899999999
Q ss_pred CccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhccccc
Q 002063 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
+................++..|+|||++.+..++.++|||||||++|||++ |+.||.... ..+....+ ....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~--~~~~~~~~----~~~~- 230 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALN--NQEVLQHV----TAGG- 230 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccC--HHHHHHHH----hcCC-
Confidence 876543322222223345678999999999999999999999999999998 999996431 11111111 0000
Q ss_pred chhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
........+..+.+++.+||+.+|++||++.++.+.|++
T Consensus 231 ---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 231 ---------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred ---------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 001112334568899999999999999999999999864
No 198
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=8.7e-35 Score=345.57 Aligned_cols=258 Identities=21% Similarity=0.328 Sum_probs=201.7
Q ss_pred HHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec----cccHHHHHHHHHHHHhcCCCceeeEeEEEEe--CCe
Q 002063 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK----GDGVKVFAAEMEILGKIRHRNILKLYACLLK--GGS 745 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~ 745 (973)
...+.+|++.+.||+|+||+||+|++..++..||+|++.. ......+.+|+.++++++||||++++++|.. ...
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 4556789999999999999999999999999999998864 2345668899999999999999999998865 456
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcC----CCCeEecCCCCCCeeecCC------
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDC----SPPIIHRDIKSSNILLDED------ 815 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~----~~~ivH~Dlkp~Nill~~~------ 815 (973)
.|+||||+++|+|.+++.... .....+++..++.|+.||+.||+|||+.. ..+||||||||+|||++.+
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~-~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~ 167 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCY-KMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGK 167 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHh-hccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccc
Confidence 899999999999999997642 22346899999999999999999999421 1459999999999999642
Q ss_pred -----------CceEEecccCCccccCCCCcccccccCccccccccccccc--CCCCccchHHHHHHHHHHHHhCCCCCC
Q 002063 816 -----------YEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYT--CKVSEKSDVFSFGVVLLELVTGRKPVE 882 (973)
Q Consensus 816 -----------~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~~l~ell~g~~pf~ 882 (973)
+.+||+|||++........ .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 168 i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~---~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~ 244 (1021)
T PTZ00266 168 ITAQANNLNGRPIAKIGDFGLSKNIGIESM---AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFH 244 (1021)
T ss_pred ccccccccCCCCceEEccCCcccccccccc---ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCC
Confidence 3489999999976543221 223468999999999854 458899999999999999999999996
Q ss_pred cccCCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 883 EEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
... .....+.... ..+. . ........+.+|+..||+.+|.+||++.+++++
T Consensus 245 ~~~----~~~qli~~lk-~~p~--------l---pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 245 KAN----NFSQLISELK-RGPD--------L---PIKGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred cCC----cHHHHHHHHh-cCCC--------C---CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 431 2222222111 1110 0 001123568899999999999999999999843
No 199
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.3e-34 Score=309.94 Aligned_cols=247 Identities=24% Similarity=0.315 Sum_probs=193.7
Q ss_pred eecccCcEEEEEEEEc--CCCceEEEEEeeccc---cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCCc
Q 002063 683 LIGSGGTGKVYRLDLK--KNAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNGN 757 (973)
Q Consensus 683 ~lG~G~~g~Vy~a~~~--~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gs 757 (973)
.||+|+||.||+|.+. +.+..||+|++.... ..+.+.+|++++++++||||+++++++. .+..++||||+++|+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 4899999999999875 445679999886532 2456889999999999999999999875 457899999999999
Q ss_pred hHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc-c
Q 002063 758 LFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV-S 836 (973)
Q Consensus 758 L~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~-~ 836 (973)
|.+++... ...+++..+..++.|++.|++|+| +++++||||||+||+++.++.+|++|||++......... .
T Consensus 81 L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 153 (257)
T cd05115 81 LNKFLSGK----KDEITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYK 153 (257)
T ss_pred HHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCccccccCCcccee
Confidence 99998743 345889999999999999999999 789999999999999999999999999998755432211 1
Q ss_pred cccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhccccccC
Q 002063 837 DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVAS 915 (973)
Q Consensus 837 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
......++..|+|||++.+..++.++|||||||++||+++ |+.||.... ..+....+. ... ..
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~~~~~~~----~~~----------~~ 217 (257)
T cd05115 154 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMK--GPEVMSFIE----QGK----------RL 217 (257)
T ss_pred ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCC--HHHHHHHHH----CCC----------CC
Confidence 1122234578999999988889999999999999999996 999997542 111111111 110 00
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 916 ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 916 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
..+.....++.+++.+||+.+|++||++.+|.+.|+.+
T Consensus 218 ~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 218 DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 11122345688899999999999999999999998764
No 200
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.2e-34 Score=322.11 Aligned_cols=255 Identities=23% Similarity=0.278 Sum_probs=197.6
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
++|++.+.||+|+||+||+|+...+++.||||++.+. ...+.+.+|..+++.++||||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 3688999999999999999999999999999998752 23455788999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++|+|.+++... ...+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++....
T Consensus 81 e~~~g~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 153 (331)
T cd05597 81 DYYVGGDLLTLLSKF----EDRLPEDMARFYLAEMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLL 153 (331)
T ss_pred ecCCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEEEEECCceeecC
Confidence 999999999999753 235788889999999999999999 8899999999999999999999999999987654
Q ss_pred CCCCcccccccCccccccccccccc-----CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccc
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYT-----CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
.... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||... +............. .
T Consensus 154 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~-----~~~~~~~~i~~~~~-~ 226 (331)
T cd05597 154 ADGT-VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE-----SLVETYGKIMNHKE-H 226 (331)
T ss_pred CCCC-ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC-----CHHHHHHHHHcCCC-c
Confidence 3221 11222468999999999863 45788999999999999999999999653 11111111111111 0
Q ss_pred hhhccccccChhhHHHHHHHHHHHHHhcCCCC--CCCCCHHHHHHHh
Q 002063 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLP--NLRPPMREVVKML 950 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP--~~Rpt~~evl~~L 950 (973)
..+ ..........+.+++.+|+..++ ..||++.++++|-
T Consensus 227 ~~~------~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp 267 (331)
T cd05597 227 FQF------PPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHP 267 (331)
T ss_pred ccC------CCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCC
Confidence 000 00111134456777777775443 3488999999884
No 201
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=9.2e-35 Score=315.80 Aligned_cols=262 Identities=24% Similarity=0.304 Sum_probs=206.4
Q ss_pred hcCCcccCeecccCcEEEEEEEEcC----CCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEe-CCee
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKK----NAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLK-GGSS 746 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~----~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~ 746 (973)
.++|++.+.||+|+||.||+|.+.. .+..||+|++... .....+.+|+.++++++||||+++++++.. +...
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4578889999999999999999875 2578999987653 335667889999999999999999998765 5778
Q ss_pred EEEEEccCCCchHHHHHhhhcC---CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecc
Q 002063 747 FLVLEYMPNGNLFQALHKRVKE---GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADF 823 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~---~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 823 (973)
++++||+++|+|.+++...... ....+++..+..++.|++.||+||| +.+++||||||+||++++++.+|++||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCHhhEEEcCCCcEEECCC
Confidence 9999999999999999764211 1246889999999999999999999 789999999999999999999999999
Q ss_pred cCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhccc
Q 002063 824 GVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNH 902 (973)
Q Consensus 824 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~ 902 (973)
|+++.+.............++..|+|||++.+..++.++|||||||++||+++ |+.||.... ..++..++.. ..
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~~~~~~~~---~~ 236 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEID--PFEMAAYLKD---GY 236 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCC--HHHHHHHHHc---CC
Confidence 99986543322211222345778999999988889999999999999999999 999996531 1111111111 10
Q ss_pred ccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 903 ENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
. . .........+.+++.+||+.||++||++.++++.|+++..
T Consensus 237 ~-~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 237 R-L----------AQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred C-C----------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 0 0 0111223468899999999999999999999999987653
No 202
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=7.9e-38 Score=335.05 Aligned_cols=363 Identities=25% Similarity=0.386 Sum_probs=248.7
Q ss_pred CceEEEeecCCCCC-ccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCCCcCCCCCCCEEec
Q 002063 73 GRVTEISFDNKSLS-GEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDL 151 (973)
Q Consensus 73 ~~v~~l~l~~~~l~-~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~L 151 (973)
.-|.++|+++|..+ +..|.+...+++++.|.|...++. .+|++++.|.+|++|.+++|++......++.|+.|+.+++
T Consensus 7 pFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~~vhGELs~Lp~LRsv~~ 85 (1255)
T KOG0444|consen 7 PFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLISVHGELSDLPRLRSVIV 85 (1255)
T ss_pred ceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhHhhhhhhccchhhHHHhh
Confidence 35677777777777 455667777777777777777776 5677777777777777777776655555555555555555
Q ss_pred cCcccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeecccccccc
Q 002063 152 SINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISG 231 (973)
Q Consensus 152 s~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~ 231 (973)
..|++ ...+||..+..+..|+.|+||+|+++ ..|..+..-+++-+|+||+|+|.
T Consensus 86 R~N~L------------------------KnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie- 139 (1255)
T KOG0444|consen 86 RDNNL------------------------KNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE- 139 (1255)
T ss_pred hcccc------------------------ccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-
Confidence 55544 44566777777777777777777777 66777777777777777777776
Q ss_pred ccch-hhhccccccEEEeecccCCCCCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCC-CCCCCCc
Q 002063 232 EFPR-SIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFS-GEFPSGF 309 (973)
Q Consensus 232 ~~p~-~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-~~~p~~~ 309 (973)
.+|. .|-++..|-.|+|++|++. .+|+.+..+.+|+.|+|++|.+...--..+..+++|++|.+++.+=+ ..+|.++
T Consensus 140 tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsl 218 (1255)
T KOG0444|consen 140 TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSL 218 (1255)
T ss_pred cCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCch
Confidence 4443 3456677777777777777 56666677777777777777665433344455666667777665433 2567777
Q ss_pred CCccccceeeccccccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccce
Q 002063 310 GDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQR 389 (973)
Q Consensus 310 ~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~ 389 (973)
..|.+|..++++.|.+. .+|+.+-++++|+.|+||+|+|+. +........+|++
T Consensus 219 d~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~ite-------------------------L~~~~~~W~~lEt 272 (1255)
T KOG0444|consen 219 DDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITE-------------------------LNMTEGEWENLET 272 (1255)
T ss_pred hhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCceee-------------------------eeccHHHHhhhhh
Confidence 77777777777777776 677888888888888888888772 2223344567888
Q ss_pred EecccccccccCCccccCCCCcceEeccCCcCCCC-CCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCc
Q 002063 390 LRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGG-ISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNN 468 (973)
Q Consensus 390 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 468 (973)
|+||.|+++ .+|++++.+++|+.|.+.+|+++-. +|.-++.+.+|+.+..++|.+. ..|+.++.+..|+.|.|+.|+
T Consensus 273 LNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~Nr 350 (1255)
T KOG0444|consen 273 LNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNR 350 (1255)
T ss_pred hccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhcccccc
Confidence 888888887 7888888888888888888876522 3444566666777777777766 667777777777777777777
Q ss_pred CCCCccccccccccCCEEEccCcc
Q 002063 469 FSGKIPSALGALRQLSSLHLEENA 492 (973)
Q Consensus 469 l~~~~p~~~~~l~~L~~L~Ls~N~ 492 (973)
+- .+|+++.-++.|+.|||..|.
T Consensus 351 Li-TLPeaIHlL~~l~vLDlreNp 373 (1255)
T KOG0444|consen 351 LI-TLPEAIHLLPDLKVLDLRENP 373 (1255)
T ss_pred ee-echhhhhhcCCcceeeccCCc
Confidence 65 566777777777777777764
No 203
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=6.7e-35 Score=323.54 Aligned_cols=239 Identities=26% Similarity=0.301 Sum_probs=188.4
Q ss_pred CeecccCcEEEEEEEEcCCCceEEEEEeeccc-----cHHHHHHHH-HHHHhcCCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----GVKVFAAEM-EILGKIRHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-----~~~~~~~E~-~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
+.||+|+||+||+|++..+++.||+|++.... ....+.+|. .+++.++||||+++++++..++..|+||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46899999999999999989999999987521 222334444 356788999999999999999999999999999
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
|+|.+++... ..++......++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH---~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~-- 150 (325)
T cd05602 81 GELFYHLQRE-----RCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN-- 150 (325)
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCC--
Confidence 9999998753 34677788889999999999999 7899999999999999999999999999987542221
Q ss_pred ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccC
Q 002063 836 SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVAS 915 (973)
Q Consensus 836 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||.... .............
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~i~~~~~------------ 213 (325)
T cd05602 151 GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN-----TAEMYDNILNKPL------------ 213 (325)
T ss_pred CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCC-----HHHHHHHHHhCCc------------
Confidence 12234568999999999999999999999999999999999999996431 1112111111110
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHH
Q 002063 916 ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVV 947 (973)
Q Consensus 916 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl 947 (973)
.........+.+++.+|++.||.+||++.+.+
T Consensus 214 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 214 QLKPNITNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 01112344678899999999999999887433
No 204
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-35 Score=325.66 Aligned_cols=255 Identities=25% Similarity=0.348 Sum_probs=210.5
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCc----eEEEEEeec---cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAG----TVAVKQLWK---GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~----~vavK~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
.....++||.|+||+||+|.+-..|+ +||+|++.. .+...++.+|+-.|.+++|||++++++++.... +.||
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlv 775 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLV 775 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHH
Confidence 34567899999999999999965444 588888765 344567899999999999999999999998776 8899
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
++||+.|+|.+|++.+ +..+.....+.|.+|||+||.||| ++.+|||||.++||||+....+||.|||+++..
T Consensus 776 tq~mP~G~LlDyvr~h----r~~igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll 848 (1177)
T KOG1025|consen 776 TQLMPLGCLLDYVREH----RDNIGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLL 848 (1177)
T ss_pred HHhcccchHHHHHHHh----hccccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEEecchhhcc
Confidence 9999999999999875 456778889999999999999999 789999999999999999999999999999987
Q ss_pred cCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhh
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
.............-.+-|||-|.+....|+.++|||||||++||++| |..|++.... ..+...+...+
T Consensus 849 ~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~------~eI~dlle~ge----- 917 (1177)
T KOG1025|consen 849 APDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA------EEIPDLLEKGE----- 917 (1177)
T ss_pred CcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH------HHhhHHHhccc-----
Confidence 66655444333444678999999999999999999999999999999 9999976521 12222222222
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
+-..++.+..+++.++.+||..|+..||+++++.+.+.++..
T Consensus 918 -----RLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ar 959 (1177)
T KOG1025|consen 918 -----RLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMAR 959 (1177)
T ss_pred -----cCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence 223455567788999999999999999999999999987654
No 205
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.2e-34 Score=310.53 Aligned_cols=246 Identities=26% Similarity=0.319 Sum_probs=194.4
Q ss_pred eecccCcEEEEEEEE--cCCCceEEEEEeeccc----cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCC
Q 002063 683 LIGSGGTGKVYRLDL--KKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNG 756 (973)
Q Consensus 683 ~lG~G~~g~Vy~a~~--~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 756 (973)
.||+|+||+||+|.+ ..++..||+|++.... ..+.+.+|+.++++++||||+++++++. ++..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 589999999999975 3557889999886532 3456888999999999999999999875 45678999999999
Q ss_pred chHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcc
Q 002063 757 NLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVS 836 (973)
Q Consensus 757 sL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 836 (973)
+|.+++... ..+++..+..++.|++.|++|+| +++++||||||+||+++.++.+||+|||++..........
T Consensus 81 ~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~ 152 (257)
T cd05116 81 PLNKFLQKN-----KHVTEKNITELVHQVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYY 152 (257)
T ss_pred cHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCee
Confidence 999998642 35788999999999999999999 7899999999999999999999999999998664332211
Q ss_pred -cccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhcccccc
Q 002063 837 -DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVA 914 (973)
Q Consensus 837 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (973)
......++..|+|||.+....++.++|||||||++|||++ |+.||.... .......+. .... .
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~~~i~----~~~~------~--- 217 (257)
T cd05116 153 KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMK--GNEVTQMIE----SGER------M--- 217 (257)
T ss_pred eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHH----CCCC------C---
Confidence 1122234678999999988889999999999999999998 999997541 122222221 1110 0
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 915 SESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 915 ~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
..+......+.+++.+||+.||++||++++|++.|++.
T Consensus 218 -~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 218 -ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred -CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 01112345678999999999999999999999999764
No 206
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.1e-34 Score=312.90 Aligned_cols=255 Identities=27% Similarity=0.426 Sum_probs=202.9
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCC---ceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNA---GTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~---~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
.+|++.+.||+|+||.||+|++..++ ..||+|.+... ...+.+.+|+.++++++||||+++++++..++..|+|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46888999999999999999986443 37999987652 2345788999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++++|.+++... ...+++.++..++.|++.|++||| +.+++||||||+||+++.++.++++|||++...
T Consensus 84 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd05066 84 TEYMENGSLDAFLRKH----DGQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVL 156 (267)
T ss_pred EEcCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeehhhchhcEEECCCCeEEeCCCCccccc
Confidence 9999999999999753 235788999999999999999999 789999999999999999999999999999866
Q ss_pred cCCCCcc-cccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 830 ENSPKVS-DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 830 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
....... ......++..|+|||++.+..++.++||||||+++||+++ |+.||.... ..+....+. ....
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~--~~~~~~~~~---~~~~---- 227 (267)
T cd05066 157 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMS--NQDVIKAIE---EGYR---- 227 (267)
T ss_pred ccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCC--HHHHHHHHh---CCCc----
Confidence 4332111 1111233568999999998889999999999999999887 999996532 111111111 1100
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
.......+..+.+++.+|++.+|++||++.++++.|.++
T Consensus 228 -------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 228 -------LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred -------CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 001112345678999999999999999999999999864
No 207
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=3.1e-35 Score=330.95 Aligned_cols=251 Identities=24% Similarity=0.310 Sum_probs=196.9
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
+|+..+.||+|+||+||+|+...+++.||||++... .....+.+|++++..++||+|+++++++.+++..|+|||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E 81 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME 81 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 688899999999999999999999999999998652 234567889999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.++|+|||++.....
T Consensus 82 ~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~ 153 (360)
T cd05627 82 FLPGGDMMTLLMKK-----DTLSEEATQFYIAETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKK 153 (360)
T ss_pred CCCCccHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEeeccCCccccc
Confidence 99999999998753 35788889999999999999999 88999999999999999999999999999875432
Q ss_pred CCCc---------------------------------ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCC
Q 002063 832 SPKV---------------------------------SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGR 878 (973)
Q Consensus 832 ~~~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~ 878 (973)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~ 233 (360)
T cd05627 154 AHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (360)
T ss_pred ccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCC
Confidence 1100 0011346999999999999999999999999999999999999
Q ss_pred CCCCcccCCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCC---HHHHHHH
Q 002063 879 KPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPP---MREVVKM 949 (973)
Q Consensus 879 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt---~~evl~~ 949 (973)
.||.... ............... . +... .....++.+++.+++ .||.+|++ +.|+++|
T Consensus 234 ~Pf~~~~-----~~~~~~~i~~~~~~~-~-~p~~------~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 234 PPFCSET-----PQETYRKVMNWKETL-V-FPPE------VPISEKAKDLILRFC-TDSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCCCCCC-----HHHHHHHHHcCCCce-e-cCCC------CCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcC
Confidence 9996542 111111111111000 0 0000 012345667777766 49999985 6788777
No 208
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.6e-34 Score=321.37 Aligned_cols=254 Identities=23% Similarity=0.283 Sum_probs=197.9
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
++|++.+.||+|+||+||+++.+.+++.||+|++.+. .....+.+|+.++..++||+|+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 3688999999999999999999998999999998652 23345788999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++|+|.+++.+. ...+++..+..++.|++.|++||| +++|+||||||+||+++.++.+||+|||++....
T Consensus 81 ey~~~g~L~~~l~~~----~~~l~~~~~~~~~~qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~ 153 (332)
T cd05623 81 DYYVGGDLLTLLSKF----EDRLPEDMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLM 153 (332)
T ss_pred eccCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEeecchheecc
Confidence 999999999999753 235788889999999999999999 7899999999999999999999999999987543
Q ss_pred CCCCcccccccCcccccccccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccc
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAY-----TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
.... .......||+.|+|||++. ...++.++|||||||++|||++|+.||... +...............
T Consensus 154 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~-----~~~~~~~~i~~~~~~~ 227 (332)
T cd05623 154 EDGT-VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE-----SLVETYGKIMNHKERF 227 (332)
T ss_pred cCCc-ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC-----CHHHHHHHHhCCCccc
Confidence 2211 1222356899999999986 346788999999999999999999999653 1222222221111100
Q ss_pred hhhccccccChhhHHHHHHHHHHHHHhcCCCCCC--CCCHHHHHHH
Q 002063 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNL--RPPMREVVKM 949 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rpt~~evl~~ 949 (973)
. . +.........+.+++.+|+..+|.+ |+++.|+++|
T Consensus 228 -~-----~-p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 228 -Q-----F-PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred -c-----C-CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 0 0 0111223455777888877554444 7899999988
No 209
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.4e-34 Score=326.50 Aligned_cols=262 Identities=26% Similarity=0.278 Sum_probs=198.7
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeC------
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKG------ 743 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------ 743 (973)
..++|++.+.||+|+||.||+|++...++.||||++... .....+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 457899999999999999999999988999999998652 3345678899999999999999999987543
Q ss_pred CeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecc
Q 002063 744 GSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADF 823 (973)
Q Consensus 744 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 823 (973)
...|+||||++ ++|.+++.. .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+||
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Df 170 (364)
T cd07875 102 QDVYIVMELMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDF 170 (364)
T ss_pred CeEEEEEeCCC-CCHHHHHHh-------cCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEECCCCcEEEEeC
Confidence 35799999996 477777653 3678888999999999999999 789999999999999999999999999
Q ss_pred cCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHH--------
Q 002063 824 GVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWV-------- 895 (973)
Q Consensus 824 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~-------- 895 (973)
|+++...... ......||..|+|||++.+..++.++|||||||++|||++|+.||...... ......+
T Consensus 171 G~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~ 246 (364)
T cd07875 171 GLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVIEQLGTPCP 246 (364)
T ss_pred CCccccCCCC---cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCH
Confidence 9997654321 122346899999999999999999999999999999999999999653110 0000000
Q ss_pred ----------HHhhcccccchhh----ccccc----cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 896 ----------STHLNNHENVLKV----LDCEV----ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 896 ----------~~~~~~~~~~~~~----~~~~~----~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.......+..... ..+.. ...........+.+++.+|++.||.+|||+.|+++|-
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp 319 (364)
T cd07875 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319 (364)
T ss_pred HHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCc
Confidence 0000011000000 00000 0000111234678999999999999999999999974
No 210
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=8.3e-35 Score=329.07 Aligned_cols=262 Identities=22% Similarity=0.295 Sum_probs=197.8
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCC-----eeE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGG-----SSF 747 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-----~~~ 747 (973)
+|++.+.||+|+||+||+|.+..+++.||||++... ...+++.+|+++++.++||||+++++++..++ ..|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478889999999999999999988999999988642 23456789999999999999999999998766 789
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+||||+. ++|.+++.. ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||+++
T Consensus 81 lv~e~~~-~~l~~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~ 151 (372)
T cd07853 81 VVTELMQ-SDLHKIIVS-----PQPLSSDHVKVFLYQILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLAR 151 (372)
T ss_pred EEeeccc-cCHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHHEEECCCCCEEecccccee
Confidence 9999996 678777753 235889999999999999999999 7899999999999999999999999999997
Q ss_pred cccCCCCcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccc---
Q 002063 828 IAENSPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE--- 903 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~--- 903 (973)
....... .......++..|+|||++.+. .++.++||||+||++|||++|+.||..... .+....+........
T Consensus 152 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~i~~~~g~~~~~~ 228 (372)
T cd07853 152 VEEPDES-KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSP--IQQLDLITDLLGTPSLEA 228 (372)
T ss_pred ecccCcc-ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCH--HHHHHHHHHHcCCCCHHH
Confidence 6543221 122234678899999998764 478999999999999999999999965421 111111100000000
Q ss_pred ------cch-hhcccccc-C------hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 904 ------NVL-KVLDCEVA-S------ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 904 ------~~~-~~~~~~~~-~------~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
... .+...... . .......+.+.+++.+|++.||++|||+.|++++-
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 289 (372)
T cd07853 229 MRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHP 289 (372)
T ss_pred HHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCH
Confidence 000 00000000 0 00112245678999999999999999999999863
No 211
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=2.2e-34 Score=316.88 Aligned_cols=262 Identities=25% Similarity=0.369 Sum_probs=202.7
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
+|++.+.||+|+||.||+|++..++..||+|.+..+ ....++.+|++++++++||||+++++++..++..++||||+
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~ 81 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM 81 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence 688999999999999999999998999999987653 23456788999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++++|.+++... ..+++..+..++.|+++||+|||+ ..+++||||||+||+++.++.++|+|||++......
T Consensus 82 ~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 153 (308)
T cd06615 82 DGGSLDQVLKKA-----GRIPENILGKISIAVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 153 (308)
T ss_pred CCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh--hCCEEECCCChHHEEEecCCcEEEccCCCccccccc-
Confidence 999999999753 347888899999999999999994 258999999999999999999999999998654322
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccccc---------
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN--------- 904 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--------- 904 (973)
......|+..|+|||++.+..++.++|||||||++|||++|+.||.... ......+..........
T Consensus 154 ---~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (308)
T cd06615 154 ---MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPD--AKELEAMFGRPVSEGEAKESHRPVSG 228 (308)
T ss_pred ---ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcc--hhhHHHhhcCccccccccCCcccccC
Confidence 1123468899999999988889999999999999999999999996432 11111111100000000
Q ss_pred ----------chhhccc---cccChh-hHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 905 ----------VLKVLDC---EVASES-IKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 905 ----------~~~~~~~---~~~~~~-~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
..+..+. ...+.. .......+.+++.+|++.+|++||++.+++++..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~ 289 (308)
T cd06615 229 HPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPF 289 (308)
T ss_pred CCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 0000000 000000 0113446889999999999999999999998854
No 212
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.6e-34 Score=328.43 Aligned_cols=265 Identities=22% Similarity=0.269 Sum_probs=201.1
Q ss_pred hcCCcccCeecccCcEEEEEEEEc--CCCceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLK--KNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~--~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
..+|++.+.||+|+||.||+|... ..+..||||.+.... ...+|++++++++||||+++++++..+...++|||+
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~---~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~ 167 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK---TPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPK 167 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc---cHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehh
Confidence 457999999999999999999764 346789999876543 346899999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
+. ++|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++|+|||++......
T Consensus 168 ~~-~~l~~~l~~-----~~~l~~~~~~~i~~ql~~aL~~LH---~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~ 238 (392)
T PHA03207 168 YK-CDLFTYVDR-----SGPLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAH 238 (392)
T ss_pred cC-CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence 95 688888843 245889999999999999999999 789999999999999999999999999999766544
Q ss_pred CCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCC--ccHHHHHHHhhcccccchh---
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDG--KDIVYWVSTHLNNHENVLK--- 907 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~--- 907 (973)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||....... ..+...+.........+..
T Consensus 239 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~ 318 (392)
T PHA03207 239 PDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGS 318 (392)
T ss_pred cccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccc
Confidence 33333334679999999999999999999999999999999999999996543211 1111111100000000000
Q ss_pred ------------hcccccc-Chh--hHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 908 ------------VLDCEVA-SES--IKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 908 ------------~~~~~~~-~~~--~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
...+... +.. .......+.+++.+|++.||++||++.|++.+-.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~ 377 (392)
T PHA03207 319 TNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPL 377 (392)
T ss_pred hhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCch
Confidence 0000000 000 0112345778999999999999999999998743
No 213
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.7e-34 Score=316.02 Aligned_cols=250 Identities=24% Similarity=0.312 Sum_probs=203.3
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
..+|++.+.||+|+||.||+|+...+++.||+|.+... ...+.+.+|+.+++.++||||+++++++..++..|+||||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 36889999999999999999999888999999988652 3445678899999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
+++++|.+++... .+++..+..++.|++.|+.||| +.+++||||||+||+++.++.++|+|||++......
T Consensus 98 ~~~~~L~~~~~~~------~~~~~~~~~~~~~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~ 168 (297)
T cd06656 98 LAGGSLTDVVTET------CMDEGQIAAVCRECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 168 (297)
T ss_pred cCCCCHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECcCccceEccCC
Confidence 9999999998642 4678889999999999999999 789999999999999999999999999998765433
Q ss_pred CCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
.. ......+++.|+|||.+.+..++.++||||+||++|++++|+.||......... ...... ..
T Consensus 169 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~-----~~~~~~---------~~ 232 (297)
T cd06656 169 QS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL-----YLIATN---------GT 232 (297)
T ss_pred cc--CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhe-----eeeccC---------CC
Confidence 21 122346788999999998888999999999999999999999999654211100 000000 00
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.....+......+.+++.+||+.+|++||++.+++++
T Consensus 233 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 233 PELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0011122334557889999999999999999999985
No 214
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.9e-34 Score=308.99 Aligned_cols=247 Identities=29% Similarity=0.404 Sum_probs=197.2
Q ss_pred CeecccCcEEEEEEEEcCCC---ceEEEEEeeccc---cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 682 NLIGSGGTGKVYRLDLKKNA---GTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~---~~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
++||+|+||.||+|++...+ ..||+|.+.... ..+++.+|++++++++||||+++++++. ....++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 46899999999999876544 789999887643 3567889999999999999999999875 4568999999999
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
|+|.+++... ..+++..+..++.|++.|++||| ..+++||||||+||+++.++.+||+|||.++........
T Consensus 80 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~ 151 (257)
T cd05060 80 GPLLKYLKKR-----REIPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY 151 (257)
T ss_pred CcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEeccccccceeecCCcc
Confidence 9999999753 25789999999999999999999 789999999999999999999999999999866443221
Q ss_pred cc-ccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhccccc
Q 002063 836 SD-YSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 836 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
.. .....++..|+|||...+..++.++|||||||++|||++ |+.||.... ..+....+... .. .
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~--~~~~~~~~~~~---~~-~-------- 217 (257)
T cd05060 152 YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMK--GAEVIAMLESG---ER-L-------- 217 (257)
T ss_pred cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCC--HHHHHHHHHcC---Cc-C--------
Confidence 11 111223568999999998899999999999999999998 999997542 22222222111 10 0
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
..+......+.+++.+|+..+|++||++.++++.|+++
T Consensus 218 --~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 218 --PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred --CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 01112345688999999999999999999999999875
No 215
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.2e-34 Score=318.35 Aligned_cols=264 Identities=22% Similarity=0.267 Sum_probs=200.6
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
..++|++.+.||+|+||.||+|++..+++.||+|.+... .....+.+|++++++++||||+++++++..++..++||
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 83 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 83 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence 346789999999999999999999988999999988642 23446778999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||++ ++|.+++... ...+++..+..++.|+++||+||| +.+++||||||+||+++.++.++|+|||++....
T Consensus 84 e~~~-~~l~~~l~~~----~~~~~~~~~~~~~~qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 155 (301)
T cd07873 84 EYLD-KDLKQYLDDC----GNSINMHNVKLFLFQLLRGLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKS 155 (301)
T ss_pred eccc-cCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEEECcCcchhccC
Confidence 9996 6898888653 335788899999999999999999 7899999999999999999999999999987543
Q ss_pred CCCCcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccc--ccchh
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH--ENVLK 907 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~ 907 (973)
.... ......+++.|+|||++.+. .++.++||||+||++|||++|+.||..... ......+....... .....
T Consensus 156 ~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~~ 231 (301)
T cd07873 156 IPTK--TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTV--EEQLHFIFRILGTPTEETWPG 231 (301)
T ss_pred CCCC--cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHcCCCChhhchh
Confidence 2211 12234568899999988654 478899999999999999999999975421 11111111110000 00000
Q ss_pred hc---------cccccC----hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 908 VL---------DCEVAS----ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 908 ~~---------~~~~~~----~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
+. .+.... .........+.+++.+|++.||.+|||+.|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 232 ILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred hhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 00 000000 0011234467889999999999999999999984
No 216
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.6e-34 Score=312.01 Aligned_cols=250 Identities=28% Similarity=0.404 Sum_probs=195.4
Q ss_pred CeecccCcEEEEEEEEcCCCc--eEEEEEeec---cccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 682 NLIGSGGTGKVYRLDLKKNAG--TVAVKQLWK---GDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~--~vavK~~~~---~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
+.||+|+||.||+|++.+++. .+|+|.... ....+.+.+|+++++++ +||||+++++++......|+||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 358999999999999987665 468887764 23445788999999999 899999999999999999999999999
Q ss_pred CchHHHHHhhhc-----------CCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEeccc
Q 002063 756 GNLFQALHKRVK-----------EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFG 824 (973)
Q Consensus 756 gsL~~~l~~~~~-----------~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 824 (973)
|+|.+++..... .....+++..+..++.|++.|++||| +.+++||||||+||++++++.+|++|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccccceEEEcCCCeEEECCCC
Confidence 999999976421 11234789999999999999999999 7899999999999999999999999999
Q ss_pred CCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccc
Q 002063 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHE 903 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 903 (973)
++...... ........+..|+|||++.+..++.++|||||||++|||++ |..||.... .. ....... ...
T Consensus 158 l~~~~~~~---~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~--~~---~~~~~~~-~~~ 228 (270)
T cd05047 158 LSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT--CA---ELYEKLP-QGY 228 (270)
T ss_pred Cccccchh---hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccC--HH---HHHHHHh-CCC
Confidence 98532211 11111233567999999988889999999999999999997 999996431 11 1111111 100
Q ss_pred cchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 904 NVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
. ..........+.+++.+||+.+|.+||++.++++.|+++
T Consensus 229 ~----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 229 R----------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred C----------CCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence 0 001112234678999999999999999999999999875
No 217
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=3.9e-35 Score=324.49 Aligned_cols=237 Identities=27% Similarity=0.329 Sum_probs=191.0
Q ss_pred CeecccCcEEEEEEEEc---CCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccC
Q 002063 682 NLIGSGGTGKVYRLDLK---KNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~---~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
+.||+|+||+||+++.. .+++.||+|++... .....+.+|++++++++||||+++++++..++..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 57999999999998863 56889999998753 234456789999999999999999999999999999999999
Q ss_pred CCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCC
Q 002063 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~ 834 (973)
+|+|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~- 152 (318)
T cd05582 82 GGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE- 152 (318)
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC-
Confidence 99999998642 35789999999999999999999 7899999999999999999999999999987553321
Q ss_pred cccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcccccc
Q 002063 835 VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVA 914 (973)
Q Consensus 835 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (973)
.......|++.|+|||++.+..++.++|||||||++|||++|+.||.... .............
T Consensus 153 -~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~-----~~~~~~~i~~~~~----------- 215 (318)
T cd05582 153 -KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKD-----RKETMTMILKAKL----------- 215 (318)
T ss_pred -CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCC-----HHHHHHHHHcCCC-----------
Confidence 11223568999999999998889999999999999999999999996531 1111111111110
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCCCCCCCHHH
Q 002063 915 SESIKEDMIKLLKIAVVCTTKLPNLRPPMRE 945 (973)
Q Consensus 915 ~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~e 945 (973)
..+......+.+++.+||+.||++||++.+
T Consensus 216 -~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 216 -GMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred -CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 011122345788999999999999999544
No 218
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.9e-34 Score=309.91 Aligned_cols=254 Identities=30% Similarity=0.404 Sum_probs=204.4
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec-cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.++|++.+.||+|+||+||+|...+ ++.||||.+.. ....+++.+|+.++++++||||+++++++..+...++||||+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~-~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 83 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNG-TTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM 83 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcC-CceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence 4578999999999999999999865 57899998876 345677899999999999999999999999888999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++++|.+++... ....+++..+..++.|++.|++||| +.+++|+||||+||++++++.++++|||.+.......
T Consensus 84 ~~~~L~~~i~~~---~~~~~~~~~~~~~~~~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (261)
T cd05034 84 SKGSLLDFLKSG---EGKKLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDE 157 (261)
T ss_pred CCCCHHHHHhcc---ccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECccccceeccchh
Confidence 999999999753 2345889999999999999999999 7899999999999999999999999999987664321
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
. .......++..|+|||.+.+..++.++||||+|+++||+++ |+.||.... . ............
T Consensus 158 ~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~--~---~~~~~~~~~~~~--------- 222 (261)
T cd05034 158 Y-TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMT--N---REVLEQVERGYR--------- 222 (261)
T ss_pred h-hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC--H---HHHHHHHHcCCC---------
Confidence 1 11112234568999999998889999999999999999998 999996431 1 111111111100
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
...+......+.+++.+|++.+|++||++.++.+.|+.
T Consensus 223 --~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 223 --MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred --CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 00011124468899999999999999999999999875
No 219
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.8e-34 Score=319.04 Aligned_cols=263 Identities=17% Similarity=0.209 Sum_probs=195.5
Q ss_pred ccCeeccc--CcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 680 EDNLIGSG--GTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 680 ~~~~lG~G--~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
+.++||+| +||+||+++.+.+++.||||++... ...+.+.+|+++++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45679999 7899999999999999999998653 23355778999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++|+|.+++..+. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++++||+.+.......
T Consensus 82 ~~~~l~~~~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~ 155 (327)
T cd08227 82 AYGSAKDLICTHF---MDGMSELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHG 155 (327)
T ss_pred CCCcHHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEcccchhhcccccc
Confidence 9999999997541 234789999999999999999999 7899999999999999999999999998654332111
Q ss_pred Ccc-----cccccCccccccccccccc--CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccc----
Q 002063 834 KVS-----DYSCFAGTHGYIAPELAYT--CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH---- 902 (973)
Q Consensus 834 ~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~---- 902 (973)
... ......++..|+|||++.+ ..++.++||||+||++|||++|+.||....... .............
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~ 234 (327)
T cd08227 156 QRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ-MLLEKLNGTVPCLLDTT 234 (327)
T ss_pred ccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhH-HHHHHhcCCcccccccc
Confidence 100 0112346778999999875 458899999999999999999999997532110 0000000000000
Q ss_pred -----------------ccchhhc---------cccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 903 -----------------ENVLKVL---------DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 903 -----------------~~~~~~~---------~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
....... ...............+.+++.+||+.||++|||++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 235 TIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred chhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 0000000 0000001122334578899999999999999999999985
No 220
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=6.9e-35 Score=323.40 Aligned_cols=237 Identities=27% Similarity=0.332 Sum_probs=188.5
Q ss_pred CeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHH-HHHhcCCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEME-ILGKIRHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~-~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
+.||+|+||+||+|++..+++.||||++.+. .....+.+|.. +++.++||||+++++++..++..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4689999999999999999999999998653 22334455554 46778999999999999999999999999999
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
|+|..++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~-- 150 (325)
T cd05604 81 GELFFHLQRE-----RSFPEPRARFYAAEIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS-- 150 (325)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCC--
Confidence 9999888642 35788999999999999999999 7899999999999999999999999999987432211
Q ss_pred ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccC
Q 002063 836 SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVAS 915 (973)
Q Consensus 836 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ............. ..
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~-----~~~~~~~~~~~~~--------~~-- 215 (325)
T cd05604 151 DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD-----VAEMYDNILHKPL--------VL-- 215 (325)
T ss_pred CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC-----HHHHHHHHHcCCc--------cC--
Confidence 12233568999999999999999999999999999999999999996531 1122121111110 00
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCHHH
Q 002063 916 ESIKEDMIKLLKIAVVCTTKLPNLRPPMRE 945 (973)
Q Consensus 916 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~e 945 (973)
.......+.+++.+|++.+|.+||++++
T Consensus 216 --~~~~~~~~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 216 --RPGASLTAWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred --CCCCCHHHHHHHHHHhccCHHhcCCCCC
Confidence 1122345778999999999999998863
No 221
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=9.5e-35 Score=321.87 Aligned_cols=236 Identities=28% Similarity=0.347 Sum_probs=187.2
Q ss_pred CeecccCcEEEEEEEEcCCCceEEEEEeeccc-----cHHHHHHHHH-HHHhcCCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----GVKVFAAEME-ILGKIRHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-----~~~~~~~E~~-~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
+.||+|+||+||+|++..+++.||+|++.+.. ....+.+|.. +++.++||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46899999999999999999999999986532 2233444544 57889999999999999999999999999999
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
|+|.+++... ..++...+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-- 150 (321)
T cd05603 81 GELFFHLQRE-----RCFLEPRARFYAAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE-- 150 (321)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC--
Confidence 9998888642 35778888899999999999999 7899999999999999999999999999987432221
Q ss_pred ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccC
Q 002063 836 SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVAS 915 (973)
Q Consensus 836 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||... +.............
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~-----~~~~~~~~i~~~~~------------ 213 (321)
T cd05603 151 ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSR-----DVSQMYDNILHKPL------------ 213 (321)
T ss_pred CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCC-----CHHHHHHHHhcCCC------------
Confidence 1223356899999999999889999999999999999999999999653 12222222111110
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 002063 916 ESIKEDMIKLLKIAVVCTTKLPNLRPPMR 944 (973)
Q Consensus 916 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~ 944 (973)
..+......+.+++.+|++.||.+||++.
T Consensus 214 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 214 QLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 01112234578899999999999999764
No 222
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.7e-34 Score=314.19 Aligned_cols=261 Identities=27% Similarity=0.345 Sum_probs=207.9
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
..+|++.+.||+|+||+||+|++..+++.||+|++... ...+.+.+|+++++.++||||+++++++......++|||
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME 83 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence 35788899999999999999999988999999987653 334678899999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|+++++|.+++... ..+++..+..++.+++.|+.|||+ .++++||||+|+||+++.++.++|+|||++.....
T Consensus 84 ~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~ 156 (284)
T cd06620 84 FMDCGSLDRIYKKG-----GPIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELIN 156 (284)
T ss_pred cCCCCCHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhh
Confidence 99999999988652 347889999999999999999994 35899999999999999999999999999865422
Q ss_pred CCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCC------ccHHHHHHHhhcccccc
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDG------KDIVYWVSTHLNNHENV 905 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~------~~~~~~~~~~~~~~~~~ 905 (973)
.. .....|+..|+|||++.+..++.++||||+||++|++++|+.||....... .....+.........
T Consensus 157 ~~----~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 230 (284)
T cd06620 157 SI----ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPP-- 230 (284)
T ss_pred hc----cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccC--
Confidence 21 123468899999999988889999999999999999999999997543211 111111111111110
Q ss_pred hhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCC
Q 002063 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPC 956 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 956 (973)
+ .....+....+.+++.+|++.||++||++.|++++..-.+..
T Consensus 231 -----~---~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~ 273 (284)
T cd06620 231 -----P---RLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQAL 273 (284)
T ss_pred -----C---CCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 0 001112345688999999999999999999999986555443
No 223
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-35 Score=320.42 Aligned_cols=247 Identities=26% Similarity=0.378 Sum_probs=201.8
Q ss_pred CeecccCcEEEEEEEEcCCCceEEEEEeec--cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCCchH
Q 002063 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWK--GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNGNLF 759 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL~ 759 (973)
-+||+|.||+||.|++..+...+|||-+.. ....+.+..|+...++++|.|||+++|++.+++..-|.||-++||+|.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 479999999999999999999999998765 345566889999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeec-CCCceEEecccCCccccCCCCcccc
Q 002063 760 QALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD-EDYEPKIADFGVAKIAENSPKVSDY 838 (973)
Q Consensus 760 ~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~-~~~~~kl~Dfgl~~~~~~~~~~~~~ 838 (973)
+.++..+ +.-+-.+..+--+..||++||.||| ++.|||||||-+||+|. -.|.+||+|||-++...... ...
T Consensus 661 sLLrskW--GPlKDNEstm~fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgin--P~T 733 (1226)
T KOG4279|consen 661 SLLRSKW--GPLKDNESTMNFYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGIN--PCT 733 (1226)
T ss_pred HHHHhcc--CCCccchhHHHHHHHHHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchhhccCC--ccc
Confidence 9998653 2222356677778999999999999 88999999999999996 48899999999998764332 223
Q ss_pred cccCcccccccccccccC--CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccCh
Q 002063 839 SCFAGTHGYIAPELAYTC--KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASE 916 (973)
Q Consensus 839 ~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (973)
..+.||..|||||++..+ .|+.++|||||||++.||.||++||.+... ..-.. .++---...+.
T Consensus 734 ETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgs--pqAAM------------FkVGmyKvHP~ 799 (1226)
T KOG4279|consen 734 ETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGS--PQAAM------------FKVGMYKVHPP 799 (1226)
T ss_pred cccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCC--hhHhh------------hhhcceecCCC
Confidence 346799999999999754 589999999999999999999999976521 11111 11111122234
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 917 SIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 917 ~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.+.+...+...++.+|+.+||.+||++.++++-
T Consensus 800 iPeelsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 800 IPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred CcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 466777888999999999999999999999864
No 224
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.6e-34 Score=320.94 Aligned_cols=254 Identities=24% Similarity=0.278 Sum_probs=198.5
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
++|++.+.||+|+||+||+|++..+++.||+|++.+. .....+.+|..++..++|++|+++++++.+++..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 3688999999999999999999998999999988652 23345778999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++|+|.+++... ...+++..+..++.|++.||+|+| +++|+||||||+||+++.++.+||+|||++....
T Consensus 81 Ey~~gg~L~~~l~~~----~~~l~~~~~~~~~~qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 153 (331)
T cd05624 81 DYYVGGDLLTLLSKF----EDRLPEDMARFYIAEMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMN 153 (331)
T ss_pred eCCCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEEEEeccceeecc
Confidence 999999999999753 235788888999999999999999 8899999999999999999999999999987654
Q ss_pred CCCCcccccccCccccccccccccc-----CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccc
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYT-----CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
.... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.... ...............
T Consensus 154 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~-----~~~~~~~i~~~~~~~ 227 (331)
T cd05624 154 QDGT-VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES-----LVETYGKIMNHEERF 227 (331)
T ss_pred CCCc-eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCC-----HHHHHHHHHcCCCcc
Confidence 3222 11223568999999999865 467889999999999999999999996431 111111111111000
Q ss_pred hhhccccccChhhHHHHHHHHHHHHHhcCCCCCC--CCCHHHHHHH
Q 002063 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNL--RPPMREVVKM 949 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rpt~~evl~~ 949 (973)
.. +....+....+.+++.+|+..++.+ |++++++++|
T Consensus 228 ------~~-p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 228 ------QF-PSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred ------cC-CCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 00 0111123456778888888866554 5688888876
No 225
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=2.6e-34 Score=308.79 Aligned_cols=251 Identities=29% Similarity=0.414 Sum_probs=203.8
Q ss_pred CeecccCcEEEEEEEEcCC---CceEEEEEeecccc---HHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 682 NLIGSGGTGKVYRLDLKKN---AGTVAVKQLWKGDG---VKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~---~~~vavK~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
+.||+|+||.||+|..... +..||+|.+..... .+.+.+|+++++.++|+|++++++++..+...++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 4689999999999999866 88999999876432 56788999999999999999999999999999999999999
Q ss_pred CchHHHHHhhhcC----CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 756 GNLFQALHKRVKE----GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 756 gsL~~~l~~~~~~----~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
++|.+++...... ....+++..+..++.|++.|++||| +++++||||+|+||++++++.++++|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH---cCCcccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999999763110 1356899999999999999999999 78999999999999999999999999999987754
Q ss_pred CCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhcc
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
...........++..|+|||.+.+..++.++||||+|+++|||++ |..||... ........ ... ..
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~---~~~-~~------- 224 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGL--SNEEVLEY---LRK-GY------- 224 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCC--CHHHHHHH---HHc-CC-------
Confidence 432222333457889999999988889999999999999999999 69999764 11111111 111 10
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
..........++.+++.+|++.+|++||++.|++++|+
T Consensus 225 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 225 ---RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ---CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 01112223567889999999999999999999999874
No 226
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=3.2e-34 Score=307.15 Aligned_cols=250 Identities=22% Similarity=0.333 Sum_probs=204.9
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeec----cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
+|+..+.||.|+||.||.++...+++.|++|.+.. ......+.+|++++++++||||+++++++.+++..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 47889999999999999999999999999998764 23445688999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
+++|+|.+++... ....+++..+..++.|++.|++||| +.+++||||+|+||++++++.+||+|||.+......
T Consensus 81 ~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~ 154 (256)
T cd08221 81 ANGGTLYDKIVRQ---KGQLFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSE 154 (256)
T ss_pred cCCCcHHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEECcCcceEEcccc
Confidence 9999999999753 2345788999999999999999999 789999999999999999999999999998766433
Q ss_pred CCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
.. ......+++.|+|||+..+..++.++||||+|+++|||++|..||.... ............
T Consensus 155 ~~--~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~-----~~~~~~~~~~~~---------- 217 (256)
T cd08221 155 YS--MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATN-----PLNLVVKIVQGN---------- 217 (256)
T ss_pred cc--cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHcCC----------
Confidence 21 2223468899999999988888999999999999999999999996431 111111111110
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.. ........++.+++.+||+.+|++||++.++++++
T Consensus 218 ~~-~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 218 YT-PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred CC-CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 00 01123345688899999999999999999999864
No 227
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.7e-34 Score=314.67 Aligned_cols=264 Identities=21% Similarity=0.249 Sum_probs=199.1
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
+|++.+.||+|++|+||+|+...+++.||||++... .....+.+|+.++++++||||+++++++.+++..|+||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 478889999999999999999988999999987642 2345678899999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
++ ++|.+++... .....+++..+..++.|++.||+||| +.+++||||+|+||+++.++.++|+|||++......
T Consensus 81 ~~-~~l~~~~~~~--~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 154 (285)
T cd07861 81 LS-MDLKKYLDSL--PKGQYMDAELVKSYLYQILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP 154 (285)
T ss_pred CC-CCHHHHHhcC--CCCCcCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEEECcccceeecCCC
Confidence 96 6898888653 12346889999999999999999999 789999999999999999999999999998755332
Q ss_pred CCcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccc---------
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH--------- 902 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~--------- 902 (973)
. .......+++.|+|||++.+. .++.++||||+||++|||++|+.||....... .............
T Consensus 155 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 231 (285)
T cd07861 155 V--RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEID-QLFRIFRILGTPTEDVWPGVTS 231 (285)
T ss_pred c--ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCChhhhhcchh
Confidence 1 122234568899999988654 47889999999999999999999997532110 0000000000000
Q ss_pred -ccchhhccc---cccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 903 -ENVLKVLDC---EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 903 -~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
......... ............++.+++.+||+.||++|||+.+++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 232 LPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred hHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 000000000 00000111234567899999999999999999999865
No 228
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=4.2e-34 Score=309.95 Aligned_cols=249 Identities=27% Similarity=0.396 Sum_probs=204.3
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
..|+..+.||.|+||.||+|.+..+++.||+|++... .....+.+|+++++++.||||+++++++.++...|+||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 3577888999999999999999988999999987653 3345788899999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
+++|+|.+++... .+++..+..++.|++.|++|+| +.+++|+||+|+||+++.++.++++|||++......
T Consensus 84 ~~~~~L~~~i~~~------~l~~~~~~~~~~~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06640 84 LGGGSALDLLRAG------PFDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 154 (277)
T ss_pred CCCCcHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEEEcccccceeccCC
Confidence 9999999988642 4678888999999999999999 789999999999999999999999999999765433
Q ss_pred CCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
.. ......++..|+|||++.+..++.++|||||||++|||++|+.||...... ...... ...
T Consensus 155 ~~--~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-----~~~~~~-----------~~~ 216 (277)
T cd06640 155 QI--KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM-----RVLFLI-----------PKN 216 (277)
T ss_pred cc--ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH-----hHhhhh-----------hcC
Confidence 21 122345788999999998888999999999999999999999999754211 111000 001
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
............+.+++.+||+.+|++||++.+++++-.
T Consensus 217 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 255 (277)
T cd06640 217 NPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKF 255 (277)
T ss_pred CCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChH
Confidence 111223345567889999999999999999999988744
No 229
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.6e-34 Score=317.36 Aligned_cols=259 Identities=25% Similarity=0.360 Sum_probs=202.4
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCc----eEEEEEeeccc---cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAG----TVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~----~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
..+|+..+.||+|+||.||+|++..+++ .||+|.+.... ....+.+|+.++++++||||+++++++..+ ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 4567888999999999999999876665 47888776532 234678899999999999999999988654 467
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+++||+++|+|.+++... ...+++..+..++.|++.||+||| +++++||||||+||+++.++.+||+|||+++
T Consensus 85 ~v~e~~~~g~l~~~~~~~----~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~ 157 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEH----KDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (303)
T ss_pred eeehhcCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHh---hcCeeccccccceeeecCCCceEEccccccc
Confidence 899999999999998753 235788899999999999999999 7899999999999999999999999999998
Q ss_pred cccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 828 IAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
...............++..|+|||++.+..++.++|||||||++||+++ |+.||.... ......++ ......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~--~~~~~~~~----~~~~~~- 230 (303)
T cd05110 158 LLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP--TREIPDLL----EKGERL- 230 (303)
T ss_pred cccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHH----HCCCCC-
Confidence 6643322212222345678999999988899999999999999999997 999996531 11111111 111100
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCC
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCT 957 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 957 (973)
.........+.+++.+||..+|++||++.++++.++++....
T Consensus 231 ---------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 231 ---------PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred ---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 001112346788999999999999999999999999875443
No 230
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=4.1e-34 Score=308.16 Aligned_cols=249 Identities=25% Similarity=0.367 Sum_probs=195.9
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-------ccHHHHHHHHHHHHhcCCCceeeEeEEEEe--CCeeE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-------DGVKVFAAEMEILGKIRHRNILKLYACLLK--GGSSF 747 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-------~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~ 747 (973)
+|+..+.||+|+||.||+|.+..++..||+|++... .....+.+|++++++++||||+++++++.. +...+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 688899999999999999999988999999987542 233567889999999999999999998865 46789
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
++|||+++++|.+++... ..+++.....++.|++.||+||| +.+++||||+|+||+++.++.++|+|||++.
T Consensus 83 l~~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~LH---~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~ 154 (266)
T cd06651 83 IFMEYMPGGSVKDQLKAY-----GALTESVTRKYTRQILEGMSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASK 154 (266)
T ss_pred EEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCCCcc
Confidence 999999999999999753 24678888899999999999999 7899999999999999999999999999987
Q ss_pred cccCCCC-cccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 828 IAENSPK-VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 828 ~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
....... ........++..|+|||++.+..++.++||||+||++||+++|+.||..... ...+.......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~-----~~~~~~~~~~~---- 225 (266)
T cd06651 155 RLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA-----MAAIFKIATQP---- 225 (266)
T ss_pred ccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch-----HHHHHHHhcCC----
Confidence 6543211 1112234578899999999988899999999999999999999999975311 11111110000
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.....+....+.+.+++ .||..+|++||++.||++|
T Consensus 226 ------~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 226 ------TNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred ------CCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 01111222334456666 6888999999999999875
No 231
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2.9e-34 Score=309.56 Aligned_cols=249 Identities=27% Similarity=0.357 Sum_probs=200.2
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc-----------cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCe
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----------GVKVFAAEMEILGKIRHRNILKLYACLLKGGS 745 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-----------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 745 (973)
+|.+...||+|++|.||+|.+..+++.||+|.+.... ..+.+.+|++++++++||||+++++++..++.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 4678889999999999999998889999999875421 12457889999999999999999999999999
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccC
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
.++||||+++++|.+++... ..+++..+..++.|++.|++|+| +.+++||||+|+||+++.++.++|+|||.
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~~l~~~l~~lH---~~~ivH~di~p~nil~~~~~~~~l~dfg~ 152 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY-----GAFEETLVRNFVRQILKGLNYLH---NRGIIHRDIKGANILVDNKGGIKISDFGI 152 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHH---hcCcccccCCHHHEEEcCCCCEEecccCC
Confidence 99999999999999999753 34778888999999999999999 78999999999999999999999999999
Q ss_pred CccccCCCCc----ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcc
Q 002063 826 AKIAENSPKV----SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNN 901 (973)
Q Consensus 826 ~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 901 (973)
++........ .......|+..|+|||.+.+..++.++||||+||++|+|++|+.||..... ...+.....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~- 226 (267)
T cd06628 153 SKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ-----LQAIFKIGE- 226 (267)
T ss_pred CcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH-----HHHHHHHhc-
Confidence 8866422111 111224578899999999888899999999999999999999999975311 111111000
Q ss_pred cccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 902 HENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
...+ ..+......+.+++.+||++||.+||++.+++++
T Consensus 227 ------~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 227 ------NASP----EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred ------cCCC----cCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 0001 1112334567889999999999999999999874
No 232
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.2e-34 Score=315.47 Aligned_cols=259 Identities=25% Similarity=0.334 Sum_probs=201.2
Q ss_pred CCcccCeecccCcEEEEEEEE----cCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeC--CeeE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDL----KKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKG--GSSF 747 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~----~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~ 747 (973)
.|++.+.||+|+||.||.|+. ..++..||+|.+... .....+.+|++++++++|||++++++++... ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 468889999999999999985 345788999988643 3345788999999999999999999988775 5689
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+||||+++++|.+++... ...+++..+..++.|++.||+|+| +++++||||||+||+++.++.++|+|||+++
T Consensus 85 lv~e~~~g~~L~~~l~~~----~~~~~~~~~~~i~~~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRN----KNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTK 157 (284)
T ss_pred EEEEccCCCCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccchheEEEcCCCCEEECCCcccc
Confidence 999999999999998653 235789999999999999999999 7899999999999999999999999999998
Q ss_pred cccCCCCc-ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCC----------CccHHHHHH
Q 002063 828 IAENSPKV-SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGD----------GKDIVYWVS 896 (973)
Q Consensus 828 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~----------~~~~~~~~~ 896 (973)
........ .......++..|+|||++.+..++.++|||||||++||+++++.|+...... .......+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05079 158 AIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVR 237 (284)
T ss_pred ccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHH
Confidence 66433221 1122345677899999998888999999999999999999987765432110 001111111
Q ss_pred HhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 897 THLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
.. .... ...........+.+++.+|++.+|++||++.++++.++++
T Consensus 238 ~~-~~~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 238 VL-EEGK----------RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HH-HcCc----------cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 10 0000 0001122345788999999999999999999999999865
No 233
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.5e-34 Score=311.27 Aligned_cols=247 Identities=29% Similarity=0.426 Sum_probs=203.1
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
+|++.+.||.|++|.||+|++..+++.||+|++..+ .....+.+|+++++.++||||+++++++.++...|+|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 678889999999999999999988999999988653 23456889999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++++|.+++... .+++..+..++.|++.|+.|+| +.+++||||+|+||++++++.++++|||+++......
T Consensus 82 ~~~~L~~~~~~~------~~~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 152 (274)
T cd06609 82 GGGSCLDLLKPG------KLDETYIAFILREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM 152 (274)
T ss_pred CCCcHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEcccccceeecccc
Confidence 999999998742 5789999999999999999999 7899999999999999999999999999998765432
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
.......++..|+|||++.+..++.++||||||+++|+|++|+.||..... ........... .+..
T Consensus 153 --~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~-----~~~~~~~~~~~-------~~~~ 218 (274)
T cd06609 153 --SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP-----MRVLFLIPKNN-------PPSL 218 (274)
T ss_pred --cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch-----HHHHHHhhhcC-------CCCC
Confidence 122234678899999999988899999999999999999999999965421 11111110000 0111
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
... .....+.+++.+|+..+|++||++++++++
T Consensus 219 ~~~---~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 219 EGN---KFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred ccc---ccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 100 134568889999999999999999999875
No 234
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.5e-34 Score=314.81 Aligned_cols=260 Identities=28% Similarity=0.358 Sum_probs=204.5
Q ss_pred cCCcccCeecccCcEEEEEEEEcC----CCceEEEEEeecccc---HHHHHHHHHHHHhcCCCceeeEeEEEEe--CCee
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKK----NAGTVAVKQLWKGDG---VKVFAAEMEILGKIRHRNILKLYACLLK--GGSS 746 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~----~~~~vavK~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~ 746 (973)
..|+..+.||+|+||.||+|+... +++.||||++..... .+.+.+|++++++++||||+++++++.. +...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 356778999999999999999753 378899999876433 5678999999999999999999999877 5678
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
++||||+++++|.+++... ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.++++|||.+
T Consensus 84 ~lv~e~~~~~~l~~~l~~~----~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 156 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRH----RDQINLKRLLLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLA 156 (284)
T ss_pred EEEEecCCCCCHHHHHHhC----ccccCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccccc
Confidence 9999999999999999754 235889999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCccc-ccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCcc----------HHHHH
Q 002063 827 KIAENSPKVSD-YSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKD----------IVYWV 895 (973)
Q Consensus 827 ~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~----------~~~~~ 895 (973)
........... .....++..|+|||...+..++.++||||||+++|||++|+.|+......... ...+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05038 157 KVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL 236 (284)
T ss_pred cccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHH
Confidence 87653222111 11223456799999998888999999999999999999999998654221111 11111
Q ss_pred HHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 896 STHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
. ..... ...........++.+++.+|++.+|++||++.||+++|+.+
T Consensus 237 ~-~~~~~----------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 237 E-LLKEG----------ERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred H-HHHcC----------CcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 1 11110 00111122335688999999999999999999999999875
No 235
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=4.8e-34 Score=316.22 Aligned_cols=200 Identities=26% Similarity=0.382 Sum_probs=164.1
Q ss_pred cCeecccCcEEEEEEEEcC--CCceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEEEEe--CCeeEEEEEccCCC
Q 002063 681 DNLIGSGGTGKVYRLDLKK--NAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLK--GGSSFLVLEYMPNG 756 (973)
Q Consensus 681 ~~~lG~G~~g~Vy~a~~~~--~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~lv~e~~~~g 756 (973)
..+||+|+||+||+|+... ++..||+|.+........+.+|++++++++||||+++++++.. +...++||||++ +
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~ 84 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE-H 84 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-C
Confidence 3579999999999999764 5678999998776556678899999999999999999998854 567899999985 5
Q ss_pred chHHHHHhhhc----CCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeee----cCCCceEEecccCCcc
Q 002063 757 NLFQALHKRVK----EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL----DEDYEPKIADFGVAKI 828 (973)
Q Consensus 757 sL~~~l~~~~~----~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill----~~~~~~kl~Dfgl~~~ 828 (973)
+|.+++..... .....+++..+..++.|++.||+||| +.+++||||||+||++ +.++.+||+|||+++.
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07867 85 DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence 88888764321 12235788899999999999999999 7899999999999999 4567899999999986
Q ss_pred ccCCCCc-ccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcc
Q 002063 829 AENSPKV-SDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEE 884 (973)
Q Consensus 829 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~ 884 (973)
....... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred cCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 6443221 122345689999999998764 5789999999999999999999999753
No 236
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=2.5e-34 Score=313.43 Aligned_cols=258 Identities=26% Similarity=0.302 Sum_probs=201.9
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhc-CCCceeeEeEEEE-----eCCe
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKI-RHRNILKLYACLL-----KGGS 745 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l-~hpniv~l~~~~~-----~~~~ 745 (973)
...++|++.+.||+|+||+||+|++..+++.||+|++... .....+.+|+.+++++ +||||+++++++. .++.
T Consensus 15 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~ 94 (286)
T cd06638 15 DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQ 94 (286)
T ss_pred CcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCe
Confidence 4567899999999999999999999998999999987653 3345678899999999 6999999999874 3456
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccC
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
.++||||+++++|.+++... ......+++..+..++.|+++|+.||| +.+++||||||+||+++.++.++++|||.
T Consensus 95 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~kl~dfg~ 170 (286)
T cd06638 95 LWLVLELCNGGSVTDLVKGF-LKRGERMEEPIIAYILHEALMGLQHLH---VNKTIHRDVKGNNILLTTEGGVKLVDFGV 170 (286)
T ss_pred EEEEEeecCCCCHHHHHHHh-hccCccccHHHHHHHHHHHHHHHHHHH---hCCccccCCCHHhEEECCCCCEEEccCCc
Confidence 89999999999999988753 223446788899999999999999999 78999999999999999999999999999
Q ss_pred CccccCCCCcccccccCcccccccccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhc
Q 002063 826 AKIAENSPKVSDYSCFAGTHGYIAPELAY-----TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLN 900 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~ 900 (973)
++....... ......|+..|+|||++. +..++.++||||+||++|||++|+.||..... .... .....
T Consensus 171 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~----~~~~-~~~~~ 243 (286)
T cd06638 171 SAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHP----MRAL-FKIPR 243 (286)
T ss_pred eeecccCCC--ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCch----hHHH-hhccc
Confidence 876543221 122346889999999875 34578899999999999999999999965311 1111 00000
Q ss_pred ccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 901 NHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
... ....++ ......+.+++.+||+.||++||++.|++++.
T Consensus 244 ~~~--~~~~~~-------~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 244 NPP--PTLHQP-------ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred cCC--CcccCC-------CCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 000 000011 11234588899999999999999999999875
No 237
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=3.7e-34 Score=333.01 Aligned_cols=263 Identities=17% Similarity=0.185 Sum_probs=194.3
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhcCC------CceeeEeEEEEeC-Ce
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRH------RNILKLYACLLKG-GS 745 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~h------pniv~l~~~~~~~-~~ 745 (973)
...+|++.+.||+|+||+||+|++..+++.||||++... .....+..|++++++++| ++++++++++..+ .+
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~ 206 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGH 206 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCce
Confidence 356899999999999999999999988999999998652 333456678888887754 4588899988764 57
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCC---------
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY--------- 816 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~--------- 816 (973)
.++|||++ +++|.+++... ..+++..+..++.||+.||+|||+ ..+||||||||+|||++.++
T Consensus 207 ~~iv~~~~-g~~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~yLH~--~~gIiHrDlKP~NILl~~~~~~~~~~~~~ 278 (467)
T PTZ00284 207 MCIVMPKY-GPCLLDWIMKH-----GPFSHRHLAQIIFQTGVALDYFHT--ELHLMHTDLKPENILMETSDTVVDPVTNR 278 (467)
T ss_pred EEEEEecc-CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHh--cCCeecCCCCHHHEEEecCCccccccccc
Confidence 89999998 77898888753 357889999999999999999993 25999999999999998765
Q ss_pred -------ceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCc
Q 002063 817 -------EPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGK 889 (973)
Q Consensus 817 -------~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~ 889 (973)
.+||+|||.+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .
T Consensus 279 ~~~~~~~~vkl~DfG~~~~~~~-----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~--~ 351 (467)
T PTZ00284 279 ALPPDPCRVRICDLGGCCDERH-----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDN--L 351 (467)
T ss_pred ccCCCCceEEECCCCccccCcc-----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh--H
Confidence 499999998754322 12345789999999999999999999999999999999999999975321 1
Q ss_pred cHHHHHHHhhcccc----------cchhhcc------ccccC-----------hhhHHHHHHHHHHHHHhcCCCCCCCCC
Q 002063 890 DIVYWVSTHLNNHE----------NVLKVLD------CEVAS-----------ESIKEDMIKLLKIAVVCTTKLPNLRPP 942 (973)
Q Consensus 890 ~~~~~~~~~~~~~~----------~~~~~~~------~~~~~-----------~~~~~~~~~l~~l~~~cl~~dP~~Rpt 942 (973)
+....+.......+ ....+.+ +.... .........+.+|+.+||++||++|||
T Consensus 352 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t 431 (467)
T PTZ00284 352 EHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLN 431 (467)
T ss_pred HHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCC
Confidence 11111111000000 0000000 00000 000011345779999999999999999
Q ss_pred HHHHHHHhh
Q 002063 943 MREVVKMLA 951 (973)
Q Consensus 943 ~~evl~~L~ 951 (973)
+.|+++|-.
T Consensus 432 a~e~L~Hp~ 440 (467)
T PTZ00284 432 ARQMTTHPY 440 (467)
T ss_pred HHHHhcCcc
Confidence 999998643
No 238
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.5e-34 Score=312.19 Aligned_cols=257 Identities=25% Similarity=0.354 Sum_probs=204.1
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCc----eEEEEEeeccc---cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAG----TVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~----~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
..+|++.+.||+|+||+||+|.++.+++ .||+|+..... ....+.+|++++++++||||+++++++.. ...+
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 84 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQ 84 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceE
Confidence 3577889999999999999999876554 58999876543 34567889999999999999999999877 7889
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+||||+++|+|.+++... ...+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||.++
T Consensus 85 ~v~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kL~dfg~~~ 157 (279)
T cd05057 85 LITQLMPLGCLLDYVRNH----KDNIGSQYLLNWCVQIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLAK 157 (279)
T ss_pred EEEecCCCCcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---hCCEEecccCcceEEEcCCCeEEECCCcccc
Confidence 999999999999999753 334889999999999999999999 7899999999999999999999999999998
Q ss_pred cccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 828 IAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
...............++..|+|||.+....++.++|+||||+++||+++ |+.||.... ..++...+. .....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~~~~~~~----~~~~~- 230 (279)
T cd05057 158 LLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIP--AVEIPDLLE----KGERL- 230 (279)
T ss_pred cccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCC--HHHHHHHHh----CCCCC-
Confidence 7653322221122234568999999988889999999999999999998 999996541 112222111 11100
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
..+......+.+++.+||..+|.+||++.++++.|+++..
T Consensus 231 ---------~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 231 ---------PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred ---------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 0011122457789999999999999999999999998754
No 239
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.6e-34 Score=314.34 Aligned_cols=250 Identities=23% Similarity=0.338 Sum_probs=203.2
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.+|++.+.||.|+||+||+|.+..+++.||+|.+... ...+.+.+|+.+++.++|||++++++++..++..|+||||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 4688999999999999999999988999999988652 34567889999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++++|.+++... .+++..+..++.|++.|++||| +.+++||||+|+||+++.++.++|+|||++.......
T Consensus 99 ~~~~L~~~~~~~------~l~~~~~~~i~~~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~ 169 (296)
T cd06655 99 AGGSLTDVVTET------CMDEAQIAAVCRECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ 169 (296)
T ss_pred CCCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccchhccccc
Confidence 999999988642 4789999999999999999999 7899999999999999999999999999987554332
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
. ......++..|+|||.+.+..++.++|||||||++|++++|+.||..... .............
T Consensus 170 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~-----~~~~~~~~~~~~~--------- 233 (296)
T cd06655 170 S--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP-----LRALYLIATNGTP--------- 233 (296)
T ss_pred c--cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhcCCc---------
Confidence 1 12234578899999999988899999999999999999999999965421 1111111100000
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
...........+.+++.+||..||++||++.+++++=
T Consensus 234 ~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~ 270 (296)
T cd06655 234 ELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHP 270 (296)
T ss_pred ccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhCh
Confidence 0011122344678899999999999999999998653
No 240
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=4.2e-34 Score=306.45 Aligned_cols=249 Identities=22% Similarity=0.346 Sum_probs=201.3
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEe-CCeeEEEEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLK-GGSSFLVLE 751 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~~lv~e 751 (973)
+|++.+.||+|++|.||+|++..+++.||+|++... ...+.+.+|++++++++|||++++++.+.. +...|+|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 478899999999999999999988999999998652 234567889999999999999999998764 446799999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|+++++|.+++... ....+++.++..++.|++.|++|+| +.+++||||+|+||+++.++.++|+|||++.....
T Consensus 81 ~~~~~~l~~~l~~~---~~~~l~~~~~~~~~~~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~ 154 (257)
T cd08223 81 FCEGGDLYHKLKEQ---KGKLLPENQVVEWFVQIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLEN 154 (257)
T ss_pred ccCCCcHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCchhEEEecCCcEEEecccceEEecc
Confidence 99999999999753 2335789999999999999999999 78999999999999999999999999999876643
Q ss_pred CCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccc
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDC 911 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
... ......+++.|+|||++.+..++.++||||+|+++|++++|+.||.... ............ .
T Consensus 155 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~-----~~~~~~~~~~~~--~------ 219 (257)
T cd08223 155 QCD--MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD-----MNSLVYRIIEGK--L------ 219 (257)
T ss_pred cCC--ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC-----HHHHHHHHHhcC--C------
Confidence 221 1223457889999999999999999999999999999999999996431 111111111100 0
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 912 EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 912 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
..........+.+++.+|++.+|++||++.+++++
T Consensus 220 ---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 220 ---PPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred ---CCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 01112344568899999999999999999999875
No 241
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.8e-34 Score=311.22 Aligned_cols=252 Identities=23% Similarity=0.335 Sum_probs=200.2
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
++|++.+.||+|+||.||+|++..+++.||+|++... .....+.+|+.+++.++||||+++++++..++..|+||||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 4788889999999999999999988999999987653 33456788999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++++|.+++... ..+++..+..++.|++.|++||| +.+++|+||||+||+++.++.++|+|||++.......
T Consensus 89 ~~~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06645 89 GGGSLQDIYHVT-----GPLSESQIAYVSRETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATI 160 (267)
T ss_pred CCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcc
Confidence 999999998643 35788999999999999999999 7899999999999999999999999999987553221
Q ss_pred CcccccccCcccccccccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcc
Q 002063 834 KVSDYSCFAGTHGYIAPELAY---TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
.......|+..|+|||++. ...++.++||||+||++|+|++|+.||...... .. +......... .
T Consensus 161 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~-~~----~~~~~~~~~~-----~ 228 (267)
T cd06645 161 --AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPM-RA----LFLMTKSNFQ-----P 228 (267)
T ss_pred --cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccch-hh----HHhhhccCCC-----C
Confidence 1223346899999999874 456888999999999999999999998643211 00 0000000000 0
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
... .........+.+++.+|++.+|++||++.+++++
T Consensus 229 ~~~--~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 229 PKL--KDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred Ccc--cccCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 000 0001123457889999999999999999999875
No 242
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=3.1e-34 Score=311.95 Aligned_cols=251 Identities=23% Similarity=0.318 Sum_probs=200.4
Q ss_pred CcccCeecccCcEEEEEEEEcCCCceEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
|++.+.||+|+||.||+|++..++..+|+|.+... ...+.+.+|+++++.++|||++++++++..+...|+||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 67788999999999999999998999999988653 3456788899999999999999999999999999999999999
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
++|..++... ...+++..+..++.|+++||+||| +.+++||||||+||+++.++.++++|||++.......
T Consensus 87 ~~l~~~~~~~----~~~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~-- 157 (282)
T cd06643 87 GAVDAVMLEL----ERPLTEPQIRVVCKQTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI-- 157 (282)
T ss_pred CcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEccccccccccccc--
Confidence 9998887642 235889999999999999999999 7899999999999999999999999999987543221
Q ss_pred ccccccCcccccccccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcc
Q 002063 836 SDYSCFAGTHGYIAPELAY-----TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 836 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
.......++..|+|||++. +..++.++||||+||++|||++|+.||.... ....+......... ..
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~-----~~~~~~~~~~~~~~--~~-- 228 (282)
T cd06643 158 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELN-----PMRVLLKIAKSEPP--TL-- 228 (282)
T ss_pred cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccC-----HHHHHHHHhhcCCC--CC--
Confidence 1122346889999999873 4457789999999999999999999996531 11111111111110 00
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
..+......+.+++.+||+.+|++||++.+++++-.
T Consensus 229 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 264 (282)
T cd06643 229 -----AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPF 264 (282)
T ss_pred -----CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCC
Confidence 011223456889999999999999999999987754
No 243
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.7e-34 Score=310.09 Aligned_cols=254 Identities=25% Similarity=0.339 Sum_probs=188.9
Q ss_pred CeecccCcEEEEEEEEcC--CCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCC
Q 002063 682 NLIGSGGTGKVYRLDLKK--NAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNG 756 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~--~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 756 (973)
+.||+|+||+||+|.... ....+|+|.+... .....+.+|++.++.++||||+++++++......|+||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 358999999999997543 3457888876543 23456788999999999999999999999999999999999999
Q ss_pred chHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcc
Q 002063 757 NLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVS 836 (973)
Q Consensus 757 sL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 836 (973)
+|.+++...........++.....++.|++.|++||| +++|+||||||+||+++.++.+||+|||++..........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHH---hcCEecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 9999998653222334567788899999999999999 7899999999999999999999999999986543322211
Q ss_pred cccccCcccccccccccc-------cCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhh
Q 002063 837 DYSCFAGTHGYIAPELAY-------TCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 837 ~~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
......++..|+|||+.. ...++.++||||+||++|||++ |..||..... .+ .......... ...
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~--~~---~~~~~~~~~~--~~~ 230 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD--EQ---VLKQVVREQD--IKL 230 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH--HH---HHHHHhhccC--ccC
Confidence 223344677899999864 2356789999999999999999 7888864311 11 1111111110 011
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
..+.. .......+.+++..|+ .||++||++.+|++.+
T Consensus 231 ~~~~~----~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 231 PKPQL----DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred CCCcc----cccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 11111 1223445677888898 5999999999999886
No 244
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=3.5e-34 Score=306.91 Aligned_cols=251 Identities=26% Similarity=0.379 Sum_probs=201.4
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccC
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
.+|++.+.||+|+||.||+|.+.. ++.+|+|.+... .....+.+|++++++++||+++++++++......++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~-~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLE-KRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeC-CCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 467888999999999999998865 678999987653 345678999999999999999999999999999999999999
Q ss_pred CCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCC
Q 002063 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~ 834 (973)
+++|.+++... ...+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|+|||.+........
T Consensus 83 ~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 155 (256)
T cd05112 83 HGCLSDYLRAQ----RGKFSQETLLGMCLDVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY 155 (256)
T ss_pred CCcHHHHHHhC----ccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCCcceeecccCcc
Confidence 99999998753 235788999999999999999999 78999999999999999999999999999876543221
Q ss_pred cccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhccccc
Q 002063 835 VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 835 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
.......++.+|+|||++.+..++.++||||+|+++|||++ |+.||.... ............ ....+.
T Consensus 156 -~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-----~~~~~~~~~~~~----~~~~~~- 224 (256)
T cd05112 156 -TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRS-----NSEVVETINAGF----RLYKPR- 224 (256)
T ss_pred -cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCC-----HHHHHHHHhCCC----CCCCCC-
Confidence 11112235678999999988889999999999999999998 999996531 112222211110 001111
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.....+.+++.+||+.+|++||++.+++++|.
T Consensus 225 ------~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 225 ------LASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred ------CCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 12356889999999999999999999999873
No 245
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=5.1e-34 Score=311.87 Aligned_cols=253 Identities=25% Similarity=0.340 Sum_probs=201.4
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
+.|++.+.||+|+||.||+|++..+++.||+|++... ...+.+.+|+++++.++||||+++++++..+...++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 4688999999999999999999998999999998653 34566888999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++++|..++.+. ...+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|+|||.+.......
T Consensus 92 ~~~~l~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 164 (292)
T cd06644 92 PGGAVDAIMLEL----DRGLTEPQIQVICRQMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL 164 (292)
T ss_pred CCCcHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEccCccceeccccc
Confidence 999998887643 235789999999999999999999 7899999999999999999999999999886543221
Q ss_pred CcccccccCcccccccccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhh
Q 002063 834 KVSDYSCFAGTHGYIAPELAY-----TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
.......++..|+|||++. ...++.++|||||||++|||++|..||.... .............
T Consensus 165 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~~~----- 232 (292)
T cd06644 165 --QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN-----PMRVLLKIAKSEP----- 232 (292)
T ss_pred --cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcccc-----HHHHHHHHhcCCC-----
Confidence 1222345788999999984 3456789999999999999999999996531 1111111111110
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
+. .........++.+++.+||+.+|++||++.+++++-.
T Consensus 233 --~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 271 (292)
T cd06644 233 --PT--LSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPF 271 (292)
T ss_pred --cc--CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 00 0111233456788999999999999999999987633
No 246
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=3.9e-34 Score=307.15 Aligned_cols=253 Identities=27% Similarity=0.425 Sum_probs=202.0
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc-cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.++|++.+.||+|+||.||+|.+.. +..||+|.+.... ..+.+.+|++++++++|+||+++++++.. ...+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~-~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecC-CccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence 4578899999999999999998764 5679999876533 45678899999999999999999999877 7789999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++|+|.+++... .....++..+..++.|++.|++|+| +.+++||||+|+||+++.++.++++|||.+.......
T Consensus 83 ~~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 156 (260)
T cd05073 83 AKGSLLDFLKSD---EGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 156 (260)
T ss_pred CCCcHHHHHHhC---CccccCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCCcceeeccCCC
Confidence 999999999753 2345788899999999999999999 7899999999999999999999999999987654322
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
. .......++..|+|||++.+..++.++|+|||||++|++++ |+.||.... ..+....+.. ...
T Consensus 157 ~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~--~~~~~~~~~~----~~~-------- 221 (260)
T cd05073 157 Y-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS--NPEVIRALER----GYR-------- 221 (260)
T ss_pred c-ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHhC----CCC--------
Confidence 1 11122345678999999988889999999999999999999 999996531 1111111111 100
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
..........+.+++.+|++.+|++||++.++.+.|+.
T Consensus 222 --~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 222 --MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred --CCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 01112234568899999999999999999999999875
No 247
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=4.5e-34 Score=304.80 Aligned_cols=245 Identities=30% Similarity=0.406 Sum_probs=194.8
Q ss_pred CeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCCch
Q 002063 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNGNL 758 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL 758 (973)
+.||+|+||.||+|... ++..||+|++... .....+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 79 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDF 79 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcH
Confidence 36899999999999876 4789999987653 2234688999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcccc
Q 002063 759 FQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDY 838 (973)
Q Consensus 759 ~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 838 (973)
.+++... ...+++..+..++.|++.|+.|+| +++++||||+|+||+++.++.++++|||++........ ...
T Consensus 80 ~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-~~~ 151 (250)
T cd05085 80 LSFLRKK----KDELKTKQLVKFALDAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY-SSS 151 (250)
T ss_pred HHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCccceecccccc-ccC
Confidence 9998643 235789999999999999999999 78999999999999999999999999999875432211 111
Q ss_pred cccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChh
Q 002063 839 SCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASES 917 (973)
Q Consensus 839 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (973)
....++..|+|||++.+..++.++||||||+++|++++ |..||..... . ..... ...... ...
T Consensus 152 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~--~---~~~~~-~~~~~~----------~~~ 215 (250)
T cd05085 152 GLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTN--Q---QAREQ-VEKGYR----------MSC 215 (250)
T ss_pred CCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCH--H---HHHHH-HHcCCC----------CCC
Confidence 12234678999999988889999999999999999998 9999965311 1 11111 111100 011
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 918 IKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 918 ~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.......+.+++.+|++.+|++||++.|++++|.
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 216 PQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 1123456889999999999999999999999875
No 248
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=5.5e-34 Score=307.76 Aligned_cols=255 Identities=25% Similarity=0.403 Sum_probs=202.1
Q ss_pred CCcccCeecccCcEEEEEEEEcC-CCceEEEEEeecc------------ccHHHHHHHHHHHHh-cCCCceeeEeEEEEe
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKK-NAGTVAVKQLWKG------------DGVKVFAAEMEILGK-IRHRNILKLYACLLK 742 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~-~~~~vavK~~~~~------------~~~~~~~~E~~~l~~-l~hpniv~l~~~~~~ 742 (973)
.|++.+.||+|+||+||+|.+.. .++.+|||.+... ....++.+|++++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47888999999999999999987 6788999987531 123446678888865 799999999999999
Q ss_pred CCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEec
Q 002063 743 GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIAD 822 (973)
Q Consensus 743 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 822 (973)
++..++||||+++++|.+++... ......+++..++.++.|++.|+.|||+ ..+++||||+|+||+++.++.++|+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSL-KEKKQRFTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHH-HhccCCCCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCHHHEEECCCCcEEEec
Confidence 99999999999999999998653 2234468889999999999999999994 36899999999999999999999999
Q ss_pred ccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccc
Q 002063 823 FGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH 902 (973)
Q Consensus 823 fgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~ 902 (973)
||.+....... ......|+..|+|||++.+..++.++||||||+++|||++|+.||.... ............
T Consensus 158 fg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~-----~~~~~~~~~~~~ 229 (269)
T cd08528 158 FGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTN-----MLSLATKIVEAV 229 (269)
T ss_pred ccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccC-----HHHHHHHHhhcc
Confidence 99987654332 2233568889999999998889999999999999999999999996431 111111111110
Q ss_pred ccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 903 ENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
............+.+++.+||+.||++||++.|+.+++++
T Consensus 230 ----------~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 230 ----------YEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred ----------CCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 0000011234568899999999999999999999998864
No 249
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=3.5e-34 Score=308.57 Aligned_cols=252 Identities=31% Similarity=0.421 Sum_probs=205.5
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
+|+..+.||+|+||.||+|.++.+++.||+|++... ....++.+|++++++++||||+++++++..+...++|+||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 577888999999999999999988999999988653 34456889999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCC-CCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCS-PPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~-~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
++++|.+++... ...++...+..++.|++.|++|+| + .+++||||+|+||+++.++.++|+|||.+......
T Consensus 82 ~~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lH---~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~ 154 (265)
T cd06605 82 DGGSLDKILKEV----QGRIPERILGKIAVAVLKGLTYLH---EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS 154 (265)
T ss_pred CCCcHHHHHHHc----cCCCCHHHHHHHHHHHHHHHHHHc---CCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHH
Confidence 999999999753 146788889999999999999999 6 89999999999999999999999999998755322
Q ss_pred CCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
.. ....++..|+|||++.+..++.++||||+|+++|+|++|+.||...................... +.
T Consensus 155 ~~----~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------~~ 223 (265)
T cd06605 155 LA----KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPP-------PR 223 (265)
T ss_pred Hh----hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCC-------CC
Confidence 11 11567889999999999899999999999999999999999997653222222222222221111 00
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
. ........+.+++.+||..+|++||++.+++++
T Consensus 224 ~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 224 L---PSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred C---ChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 0 011145568899999999999999999999875
No 250
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2.8e-34 Score=321.39 Aligned_cols=259 Identities=22% Similarity=0.311 Sum_probs=195.8
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeC------C
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKG------G 744 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------~ 744 (973)
.++|++.+.||+|+||+||+|.+..+++.||||++... .....+.+|++++++++||||+++++++... .
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN 93 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence 46789999999999999999999988999999988653 2335577899999999999999999987543 3
Q ss_pred eeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEeccc
Q 002063 745 SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFG 824 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 824 (973)
..|+++|++ +++|.+++.. ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 94 ~~~~~~~~~-~~~l~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg 163 (343)
T cd07878 94 EVYLVTNLM-GADLNNIVKC------QKLSDEHVQFLIYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFG 163 (343)
T ss_pred cEEEEeecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhhEEECCCCCEEEcCCc
Confidence 568999998 7899887753 24788999999999999999999 7899999999999999999999999999
Q ss_pred CCccccCCCCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccc-
Q 002063 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH- 902 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~- 902 (973)
+++..... .....||..|+|||++.+ ..++.++||||+||++|+|++|+.||..... .+....+.......
T Consensus 164 ~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~ 236 (343)
T cd07878 164 LARQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDY--IDQLKRIMEVVGTPS 236 (343)
T ss_pred cceecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCH--HHHHHHHHHHhCCCC
Confidence 99865432 223468999999999876 5688999999999999999999999965311 11111100000000
Q ss_pred ccch---------hhcc--ccccCh----hhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 903 ENVL---------KVLD--CEVASE----SIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 903 ~~~~---------~~~~--~~~~~~----~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.... .... +..... ......+.+.+++.+|++.||.+|||+.|+++|-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp 299 (343)
T cd07878 237 PEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHP 299 (343)
T ss_pred HHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 0000 0000 000000 0011123467899999999999999999999873
No 251
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=5.9e-34 Score=306.72 Aligned_cols=254 Identities=24% Similarity=0.378 Sum_probs=205.1
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEe--CCeeEEEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLK--GGSSFLVL 750 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~lv~ 750 (973)
+|++.+.||.|+||.||+|.+..+++.||+|++... ...+++.+|++++++++||||+++++++.. +...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 478889999999999999999998999999988642 334567889999999999999999998754 45689999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcC--CCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDC--SPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~--~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||+++++|.+++... ......+++..+..++.|++.|++|+|..+ +.+++||||+|+||+++.++.+|++|||++..
T Consensus 81 e~~~~~~L~~~l~~~-~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~ 159 (265)
T cd08217 81 EYCEGGDLAQLIQKC-KKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI 159 (265)
T ss_pred hhccCCCHHHHHHHH-hhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccc
Confidence 999999999999764 233456899999999999999999999543 57899999999999999999999999999987
Q ss_pred ccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhh
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
....... .....++..|+|||++.+..++.++||||||+++|+|++|+.||.... . ........ ..
T Consensus 160 ~~~~~~~--~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~---~~~~~~~~-~~------ 225 (265)
T cd08217 160 LGHDSSF--AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN--Q---LQLASKIK-EG------ 225 (265)
T ss_pred ccCCccc--ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC--H---HHHHHHHh-cC------
Confidence 6543221 123468899999999998889999999999999999999999997542 1 11111111 10
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
............+.+++.+|++.+|++||++.+|+++
T Consensus 226 ----~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 226 ----KFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred ----CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 0111222345678899999999999999999999976
No 252
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-35 Score=286.55 Aligned_cols=253 Identities=26% Similarity=0.356 Sum_probs=197.1
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e 751 (973)
++.+.+..||.|..|.||+++.+.+|...|||..... ++-+++.+.+.++..- ++|+||+.++||..+..+++.||
T Consensus 92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe 171 (391)
T KOG0983|consen 92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME 171 (391)
T ss_pred HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence 4456677899999999999999999999999998774 3445566677776554 58999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
.|. .-...++++. ..++++.-.-++...+..||.||-+ +++|+|||+||+|||+|+.|.+|+||||.+.++-.
T Consensus 172 lMs-~C~ekLlkri----k~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd 244 (391)
T KOG0983|consen 172 LMS-TCAEKLLKRI----KGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD 244 (391)
T ss_pred HHH-HHHHHHHHHh----cCCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeec
Confidence 983 4556666543 3457888888899999999999987 68999999999999999999999999999976643
Q ss_pred CCCcccccccCcccccccccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhh
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAY---TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
. ..++...|-+.|||||.+. ...|+-++||||||++++|+.||+.||..-.. ++... -..+.+.+
T Consensus 245 S---kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~t---dFe~l-tkvln~eP----- 312 (391)
T KOG0983|consen 245 S---KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKT---DFEVL-TKVLNEEP----- 312 (391)
T ss_pred c---cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCc---cHHHH-HHHHhcCC-----
Confidence 3 3344456889999999885 34688999999999999999999999975321 22111 11111111
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
+.+..+ ......+.+++..|+++|+.+||...++++|--
T Consensus 313 --P~L~~~--~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~F 351 (391)
T KOG0983|consen 313 --PLLPGH--MGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPF 351 (391)
T ss_pred --CCCCcc--cCcCHHHHHHHHHHhhcCcccCcchHHHhcCcc
Confidence 111111 125667899999999999999999999987643
No 253
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=6.3e-34 Score=303.90 Aligned_cols=247 Identities=28% Similarity=0.381 Sum_probs=197.2
Q ss_pred CeecccCcEEEEEEEEcCCCceEEEEEeeccc---cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCCch
Q 002063 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNGNL 758 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL 758 (973)
++||+|+||.||+|.+.. ++.||+|.+.... ....+.+|++++++++||||+++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l 79 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSL 79 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence 468999999999999988 8999999876532 346788999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcccc
Q 002063 759 FQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDY 838 (973)
Q Consensus 759 ~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 838 (973)
.+++... ...+++..+..++.+++.|++||| +++++||||+|+||+++.++.++|+|||.+............
T Consensus 80 ~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~ 152 (251)
T cd05041 80 LTFLRKK----KNRLTVKKLLQMSLDAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSD 152 (251)
T ss_pred HHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceecc
Confidence 9998753 235788899999999999999999 789999999999999999999999999998755422211111
Q ss_pred cccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChh
Q 002063 839 SCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASES 917 (973)
Q Consensus 839 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (973)
....++..|+|||++.+..++.++|||||||++|||++ |..||..... ......+.. .. ....
T Consensus 153 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~--~~~~~~~~~----~~----------~~~~ 216 (251)
T cd05041 153 GLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN--QQTRERIES----GY----------RMPA 216 (251)
T ss_pred ccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH--HHHHHHHhc----CC----------CCCC
Confidence 12234567999999988889999999999999999999 8888865421 111111110 00 0001
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 918 IKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 918 ~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
+......+.+++.+|++.+|++||++.|+++.|..
T Consensus 217 ~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 217 PQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred CccCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 12234568899999999999999999999998863
No 254
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=8e-34 Score=305.23 Aligned_cols=253 Identities=27% Similarity=0.373 Sum_probs=204.2
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
++|++.+.||.|+||.||+|+...+++.+|+|++... ...+.+.+|++++++++||||+++++++..+...|++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 4788899999999999999999988899999988753 34567899999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++++|.+++... ...++...+..++.|++.|++||| +.+++||||+|+||+++.++.++|+|||.+.......
T Consensus 83 ~~~~l~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 155 (262)
T cd06613 83 GGGSLQDIYQVT----RGPLSELQIAYVCRETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI 155 (262)
T ss_pred CCCcHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECccccchhhhhhh
Confidence 999999988753 235788899999999999999999 7899999999999999999999999999987654321
Q ss_pred CcccccccCcccccccccccccC---CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTC---KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
. ......++..|+|||.+.+. .++.++||||+|+++|||++|+.||..... ........... ..
T Consensus 156 ~--~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~-----~~~~~~~~~~~------~~ 222 (262)
T cd06613 156 A--KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHP-----MRALFLISKSN------FP 222 (262)
T ss_pred h--ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhcc------CC
Confidence 1 12234678899999998776 788999999999999999999999965321 11111000000 00
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
... ..........+.+++.+||+.+|.+||++.+|+++
T Consensus 223 ~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 223 PPK-LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred Ccc-ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 11123345678899999999999999999999864
No 255
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.3e-33 Score=307.77 Aligned_cols=262 Identities=30% Similarity=0.332 Sum_probs=205.2
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEe--CCeeEEEEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLK--GGSSFLVLE 751 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~lv~e 751 (973)
+|+..+.||.|++|.||+|.+..+++.||+|.+... ....++.+|++++++++||||+++++++.. +...|+|||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 81 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME 81 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence 678889999999999999999988999999988753 234668899999999999999999998865 347899999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|+++++|.+++.... .....++...+..++.|+++||+|+| +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 ~~~~~~L~~~l~~~~-~~~~~l~~~~~~~i~~~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 82 YCEGGSLDSIYKKVK-KRGGRIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred ecCCCCHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 999999999887542 23445788899999999999999999 78999999999999999999999999999865432
Q ss_pred CCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccc
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDC 911 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
... ....++..|+|||.+.+..++.++||||+||++|+|++|+.||....................... .. ..
T Consensus 158 ~~~----~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~ 230 (287)
T cd06621 158 SLA----GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNP--EL-KD 230 (287)
T ss_pred ccc----ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCch--hh-cc
Confidence 211 124568899999999988999999999999999999999999986532212222222222111110 00 00
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 912 EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 912 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.. .......+.+.+++.+||+++|++|||+.|++++-.
T Consensus 231 ~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~ 268 (287)
T cd06621 231 EP--GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPW 268 (287)
T ss_pred CC--CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcc
Confidence 00 001123456889999999999999999999998654
No 256
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=8.6e-34 Score=309.28 Aligned_cols=262 Identities=24% Similarity=0.324 Sum_probs=200.7
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
++|+..+.||+|+||.||+|+++.+++.||+|++... ...+.+.+|++++++++|||++++++++..+...++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 3688899999999999999999988999999987642 223567899999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|++++.|..+... ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.++|+|||++.....
T Consensus 81 ~~~~~~l~~~~~~-----~~~~~~~~~~~~~~ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07847 81 YCDHTVLNELEKN-----PRGVPEHLIKKIIWQTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGFARILTG 152 (286)
T ss_pred ccCccHHHHHHhC-----CCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEECccccceecCC
Confidence 9999888776643 235789999999999999999999 78999999999999999999999999999986644
Q ss_pred CCCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcc---------
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNN--------- 901 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~--------- 901 (973)
... ......++..|+|||++.+ ..++.++||||+|+++|||++|+.||...... +...........
T Consensus 153 ~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 228 (286)
T cd07847 153 PGD--DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDV--DQLYLIRKTLGDLIPRHQQIF 228 (286)
T ss_pred Ccc--cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCChHHhhhc
Confidence 321 1223457889999999876 45788999999999999999999999754211 111111110000
Q ss_pred --cccchhhccccccC-----hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 902 --HENVLKVLDCEVAS-----ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 902 --~~~~~~~~~~~~~~-----~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.........+.... .........+.+++.+||+++|++||++.|++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 229 STNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred ccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 00000000000000 0011234668899999999999999999999875
No 257
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=6.8e-34 Score=306.81 Aligned_cols=253 Identities=23% Similarity=0.329 Sum_probs=197.5
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
..+.....||+|+||.||+|++..++..||+|.+... ...+.+.+|++++++++||||+++++++..++..++||||+
T Consensus 8 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 87 (268)
T cd06624 8 DENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQV 87 (268)
T ss_pred ccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecC
Confidence 3445557899999999999999988999999987653 34567889999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC-CCceEEecccCCccccCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE-DYEPKIADFGVAKIAENS 832 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~Dfgl~~~~~~~ 832 (973)
++++|.+++.... .....++..+..++.|++.|++||| +.+++||||||+||+++. ++.++|+|||.+......
T Consensus 88 ~~~~L~~~l~~~~--~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~ 162 (268)
T cd06624 88 PGGSLSALLRSKW--GPLKDNEQTIIFYTKQILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGI 162 (268)
T ss_pred CCCCHHHHHHHhc--ccCCCcHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCeEEEecchhheecccC
Confidence 9999999997531 1112267788889999999999999 789999999999999976 679999999998755332
Q ss_pred CCcccccccCcccccccccccccCC--CCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcc
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYTCK--VSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
.. ......|+..|+|||++.+.. ++.++||||+|+++|+|++|+.||..... .....+........
T Consensus 163 ~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~-------- 230 (268)
T cd06624 163 NP--CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGE--PQAAMFKVGMFKIH-------- 230 (268)
T ss_pred CC--ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccC--hhhhHhhhhhhccC--------
Confidence 21 122345789999999986543 78899999999999999999999965321 11111111000000
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
...+......+.+++.+||+.+|++||++.|++++
T Consensus 231 ----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 231 ----PEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred ----CCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 01112234567889999999999999999999876
No 258
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=3.6e-34 Score=306.31 Aligned_cols=247 Identities=28% Similarity=0.435 Sum_probs=199.4
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
.+|++.+.||+|+||.||++.. +++.||+|.+......+.+.+|+.++++++|||++++++++..+ ..++||||+++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~ 82 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSK 82 (254)
T ss_pred HHceeeeeeccCCCCceEeccc--CCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCC
Confidence 5688999999999999999975 47789999987766667889999999999999999999988654 47999999999
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
++|.+++... ....+++..+..++.|++.|++|+| +.+++||||||+||+++.++.++|+|||.+.......
T Consensus 83 ~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~-- 154 (254)
T cd05083 83 GNLVNFLRTR---GRALVSVIQLLQFSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV-- 154 (254)
T ss_pred CCHHHHHHhc---CcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEECCCccceeccccC--
Confidence 9999999753 2345788899999999999999999 7899999999999999999999999999987543211
Q ss_pred ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhcccccc
Q 002063 836 SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVA 914 (973)
Q Consensus 836 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (973)
.....+..|+|||++.+..++.++||||+||++|||++ |+.||.... ......... ... .
T Consensus 155 ---~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-----~~~~~~~~~-~~~----------~ 215 (254)
T cd05083 155 ---DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMS-----LKEVKECVE-KGY----------R 215 (254)
T ss_pred ---CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCC-----HHHHHHHHh-CCC----------C
Confidence 11234568999999988889999999999999999998 999996531 111111111 110 0
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 915 SESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 915 ~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
.......+..+.+++.+||+.+|++||++.++++.|++
T Consensus 216 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 216 MEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 01112234567899999999999999999999998864
No 259
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=2.4e-34 Score=311.91 Aligned_cols=247 Identities=27% Similarity=0.420 Sum_probs=200.8
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.|+..+.||+|+||.||+|.+..+++.||+|.+... ...+.+.+|++++++++||||+++++++..+...|+||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 466778899999999999999988999999987642 33456889999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++++|.+++.. ..+++..+..++.|+++|+.||| +++++|+||+|+||+++.++.++++|||++.......
T Consensus 85 ~~~~L~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06642 85 GGGSALDLLKP------GPLEETYIATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred CCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHh---cCCeeccCCChheEEEeCCCCEEEccccccccccCcc
Confidence 99999998863 24788899999999999999999 7899999999999999999999999999987654321
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
. ......++..|+|||++.+..++.++|||||||++|||++|+.||...... ..... .... .
T Consensus 156 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--~~~~~----~~~~----------~ 217 (277)
T cd06642 156 I--KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM--RVLFL----IPKN----------S 217 (277)
T ss_pred h--hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchh--hHHhh----hhcC----------C
Confidence 1 122245788999999999888999999999999999999999998653211 11111 0000 0
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
...........+.+++.+||+.+|++||++.+++++-
T Consensus 218 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 254 (277)
T cd06642 218 PPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHK 254 (277)
T ss_pred CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhH
Confidence 0111123345688999999999999999999999863
No 260
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.4e-34 Score=310.77 Aligned_cols=253 Identities=25% Similarity=0.384 Sum_probs=201.5
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
+|++.+.||+|+||+||+|++..++..||+|.+... .....+.+|++++++++||||+++++++..++..|+||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 678899999999999999999988999999988653 23467889999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++++|.+++... .....+++..+..++.|++.|+.|||+ +.+++||||||+||+++.++.++|+|||.+.......
T Consensus 82 ~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (286)
T cd06622 82 DAGSLDKLYAGG--VATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL 157 (286)
T ss_pred CCCCHHHHHHhc--cccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc
Confidence 999999888752 123358899999999999999999994 3589999999999999999999999999987553221
Q ss_pred CcccccccCcccccccccccccCC------CCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCK------VSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
.....++..|+|||++.+.. ++.++||||+||++|+|++|+.||.... ...............
T Consensus 158 ----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~----- 226 (286)
T cd06622 158 ----AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPET--YANIFAQLSAIVDGD----- 226 (286)
T ss_pred ----cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcc--hhhHHHHHHHHhhcC-----
Confidence 12245788999999985543 4789999999999999999999996531 111111111111100
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
....+.+....+.+++.+|++.+|++||++.+++++-
T Consensus 227 ------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~ 263 (286)
T cd06622 227 ------PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHP 263 (286)
T ss_pred ------CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcCh
Confidence 0111223456688999999999999999999999863
No 261
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=8.6e-34 Score=303.82 Aligned_cols=249 Identities=21% Similarity=0.347 Sum_probs=203.8
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
+|++.+.||+|+||.||+++...+++.||+|++... ...+++.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 478899999999999999999988999999988642 3345788999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
+++++|.+++... ....+++..+..++.|++.|++|+| +.+++|+||+|+||+++.++.++++|||.+......
T Consensus 81 ~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~ 154 (256)
T cd08218 81 CEGGDLYKKINAQ---RGVLFPEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNST 154 (256)
T ss_pred CCCCcHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcc
Confidence 9999999988753 2235788899999999999999999 789999999999999999999999999998765432
Q ss_pred CCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
.. ......|+..|+|||+..+..++.++|||||||++|+|++|+.||... +....+........
T Consensus 155 ~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~-----~~~~~~~~~~~~~~--------- 218 (256)
T cd08218 155 VE--LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG-----NMKNLVLKIIRGSY--------- 218 (256)
T ss_pred hh--hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC-----CHHHHHHHHhcCCC---------
Confidence 21 112245788999999999888999999999999999999999999643 12222222111110
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
..........+.+++.+||+.+|++||++.+|+++
T Consensus 219 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 219 --PPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred --CCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 01122334568899999999999999999999985
No 262
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.3e-35 Score=311.67 Aligned_cols=253 Identities=25% Similarity=0.344 Sum_probs=198.2
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec----cccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK----GDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~----~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv 749 (973)
-..|++.++||+||.++||++...+ .+.||+|++.. .....-|.+|+..|.++ .|.+|+++++|...++..|||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv 438 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV 438 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence 3578999999999999999999876 45777776543 33456689999999999 499999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||= ..+|.++|+... .....| .+..++.|++.|+.++| .+||||.||||.|+++-. |.+||.|||.|.-+
T Consensus 439 mE~G-d~DL~kiL~k~~---~~~~~~-~lk~ywkqML~aV~~IH---~~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI 509 (677)
T KOG0596|consen 439 MECG-DIDLNKILKKKK---SIDPDW-FLKFYWKQMLLAVKTIH---QHGIVHSDLKPANFLLVK-GRLKLIDFGIANAI 509 (677)
T ss_pred eecc-cccHHHHHHhcc---CCCchH-HHHHHHHHHHHHHHHHH---HhceeecCCCcccEEEEe-eeEEeeeechhccc
Confidence 9976 569999998752 222334 67789999999999999 789999999999998765 68999999999888
Q ss_pred cCCCCcccccccCcccccccccccccC-----------CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHh
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYTC-----------KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTH 898 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~ 898 (973)
............+||+.||+||++... +.++++||||+||+||+|+.|+.||+... -.|.
T Consensus 510 ~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~------n~~a--- 580 (677)
T KOG0596|consen 510 QPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII------NQIA--- 580 (677)
T ss_pred CccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH------HHHH---
Confidence 766555555668899999999998432 26678999999999999999999997531 0111
Q ss_pred hcccccchhhccccccChhhHHH-HHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 899 LNNHENVLKVLDCEVASESIKED-MIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.+..+.+++...+++.-- ..++.+++..|+++||.+||+..|++++--
T Consensus 581 -----Kl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpF 629 (677)
T KOG0596|consen 581 -----KLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPF 629 (677)
T ss_pred -----HHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCcc
Confidence 123344443322221100 112889999999999999999999998743
No 263
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=6e-34 Score=308.03 Aligned_cols=254 Identities=28% Similarity=0.389 Sum_probs=200.2
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc------------ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCC
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG------------DGVKVFAAEMEILGKIRHRNILKLYACLLKGG 744 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~------------~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 744 (973)
+|...+.||+|+||.||+|....+++.||+|.+... ...+.+.+|++++++++|||++++++++..++
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 467788999999999999999988999999987531 01245778999999999999999999999999
Q ss_pred eeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEeccc
Q 002063 745 SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFG 824 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 824 (973)
..++||||+++++|.+++... ..+++..+..++.|++.|+.|+| +.+++||||+|+||+++.++.++++|||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~~~nil~~~~~~~~l~d~~ 153 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY-----GRFEEQLVRFFTEQVLEGLAYLH---SKGILHRDLKADNLLVDADGICKISDFG 153 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHh---hCCeeecCCChhhEEEcCCCeEEEeecc
Confidence 999999999999999998753 35788889999999999999999 7899999999999999999999999999
Q ss_pred CCccccCCCCcccccccCcccccccccccccCC--CCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccc
Q 002063 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAYTCK--VSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH 902 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~ 902 (973)
.+................|+..|+|||++.... ++.++||||+|+++||+++|..||.... .............
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~----~~~~~~~~~~~~~ 229 (272)
T cd06629 154 ISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEE----AIAAMFKLGNKRS 229 (272)
T ss_pred ccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcc----hHHHHHHhhcccc
Confidence 987654322212222345788999999987654 7889999999999999999999996431 1111111110000
Q ss_pred ccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 903 ENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
..........+....+.+++.+|++++|++||++.+|+++
T Consensus 230 -------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 230 -------APPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred -------CCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 0011111122345678899999999999999999999986
No 264
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=2.6e-34 Score=313.04 Aligned_cols=262 Identities=23% Similarity=0.297 Sum_probs=197.8
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
+|++.+.||+|+||+||+|++..+|+.||+|++... .....+.+|++++++++||||+++++++.+....++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 478889999999999999999999999999988652 2234577899999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
++ ++|.+++... ...+++..+..++.|+++||+||| +.+++||||||+||+++.++.++|+|||+++.....
T Consensus 81 ~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 152 (284)
T cd07839 81 CD-QDLKKYFDSC----NGDIDPEIVKSFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 152 (284)
T ss_pred CC-CCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECccchhhccCCC
Confidence 96 5888877642 235889999999999999999999 789999999999999999999999999998765432
Q ss_pred CCcccccccCcccccccccccccCC-CCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccc-----cch
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYTCK-VSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE-----NVL 906 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~-----~~~ 906 (973)
.. ......++..|+|||++.+.. ++.++||||+||++|||++|..|+............... ...... ...
T Consensus 153 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 229 (284)
T cd07839 153 VR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFR-LLGTPTEESWPGVS 229 (284)
T ss_pred CC--CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHH-HhCCCChHHhHHhh
Confidence 21 122345788999999987654 689999999999999999999987432211111110000 000000 000
Q ss_pred hhcc----cccc-----ChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 907 KVLD----CEVA-----SESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 907 ~~~~----~~~~-----~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
...+ .... ..........+.+++.+|++.||.+|||+.+++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 230 KLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred hcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 0000 0000 01112234677899999999999999999999875
No 265
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.3e-33 Score=304.61 Aligned_cols=257 Identities=30% Similarity=0.423 Sum_probs=206.2
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
++|++.+.||.|+||+||+|....++..||+|++... ...+.+.+|++.++.++|||++++++.+..+...++||||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 3688999999999999999999888999999988653 2456788999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
+++++|.++++... ....+++..+..++.|++.|++||| +.+++||||+|+||++++++.++++|||++......
T Consensus 81 ~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~ 155 (267)
T cd06610 81 LSGGSLLDIMKSSY--PRGGLDEAIIATVLKEVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADG 155 (267)
T ss_pred cCCCcHHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccC
Confidence 99999999997531 2246789999999999999999999 789999999999999999999999999998766543
Q ss_pred CCcc--cccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhc
Q 002063 833 PKVS--DYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 833 ~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
.... ......|+..|+|||++... .++.++||||+||++|||++|+.||...... ...........
T Consensus 156 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-----~~~~~~~~~~~------ 224 (267)
T cd06610 156 GDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM-----KVLMLTLQNDP------ 224 (267)
T ss_pred ccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh-----hhHHHHhcCCC------
Confidence 2221 12234688999999998776 7889999999999999999999999754211 11111111111
Q ss_pred cccccCh-hhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 910 DCEVASE-SIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 910 ~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
...... ........+.+++.+|++.||++||++.+++++
T Consensus 225 -~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 225 -PSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred -CCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 000000 012345668899999999999999999999875
No 266
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=9.6e-34 Score=305.13 Aligned_cols=250 Identities=25% Similarity=0.333 Sum_probs=198.0
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-------ccHHHHHHHHHHHHhcCCCceeeEeEEEEeC--Cee
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-------DGVKVFAAEMEILGKIRHRNILKLYACLLKG--GSS 746 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-------~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~ 746 (973)
.+|++.+.||+|+||.||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++.++ ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4688899999999999999999999999999987531 2245678899999999999999999988763 467
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
++||||+++++|.+++... ..+++.....++.|++.||+|+| +.+++|+||||+||+++.++.++|+|||.+
T Consensus 82 ~~v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~ 153 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY-----GALTENVTRKYTRQILEGVSYLH---SNMIVHRDIKGANILRDSVGNVKLGDFGAS 153 (265)
T ss_pred EEEEEecCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEecCCCCEEECcCccc
Confidence 8999999999999998753 24677888899999999999999 789999999999999999999999999998
Q ss_pred ccccCCCC-cccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccc
Q 002063 827 KIAENSPK-VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 827 ~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
........ ........|+..|+|||++.+..++.++|||||||++|||++|+.||.... ... .+......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~----~~~-~~~~~~~~---- 224 (265)
T cd06652 154 KRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFE----AMA-AIFKIATQ---- 224 (265)
T ss_pred cccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccc----hHH-HHHHHhcC----
Confidence 76543211 112223458889999999988889999999999999999999999996431 111 11111100
Q ss_pred hhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
......+......+.+++.+|+. +|.+||+++|++++
T Consensus 225 ------~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 225 ------PTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred ------CCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 01111233445567888889984 99999999999875
No 267
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=5.5e-34 Score=305.54 Aligned_cols=249 Identities=27% Similarity=0.366 Sum_probs=197.7
Q ss_pred CeecccCcEEEEEEEEcC-CC--ceEEEEEeeccc---cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 682 NLIGSGGTGKVYRLDLKK-NA--GTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~-~~--~~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
+.||+|++|.||+|.+.. .+ ..||||.+.... ..+.+.+|++++++++||||+++++++.. ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999999865 23 369999887643 35678899999999999999999999888 889999999999
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
|+|.+++..... ..+++..+..++.|++.||+||| +.+++||||+|+||+++.++.+||+|||++.........
T Consensus 80 ~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 153 (257)
T cd05040 80 GSLLDRLRKDAL---GHFLISTLCDYAVQIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH 153 (257)
T ss_pred CcHHHHHHhccc---ccCcHHHHHHHHHHHHHHHHHHH---hCCccccccCcccEEEecCCEEEeccccccccccccccc
Confidence 999999986421 46789999999999999999999 789999999999999999999999999999876442221
Q ss_pred c-cccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhccccc
Q 002063 836 S-DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 836 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
. ......++..|+|||++.+..++.++|||||||++|||++ |+.||.... ...............
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-----~~~~~~~~~~~~~~~-------- 220 (257)
T cd05040 154 YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLS-----GSQILKKIDKEGERL-------- 220 (257)
T ss_pred eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHhcCCcC--------
Confidence 1 1112456789999999998899999999999999999998 999996431 111111111111100
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
......+..+.+++.+|++.+|++||++.++++.|.+
T Consensus 221 --~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 257 (257)
T cd05040 221 --ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLPE 257 (257)
T ss_pred --CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhcC
Confidence 0111234568899999999999999999999998753
No 268
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.1e-33 Score=303.81 Aligned_cols=239 Identities=22% Similarity=0.325 Sum_probs=185.9
Q ss_pred CeecccCcEEEEEEEEcCC------------CceEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeE
Q 002063 682 NLIGSGGTGKVYRLDLKKN------------AGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~------------~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
+.||+|+||.||+|+.... ...||+|++... .....+.+|+.+++.++||||+++++++..+...+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 3689999999999986421 235888987552 33456788999999999999999999999988999
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCc-------eEE
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE-------PKI 820 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~-------~kl 820 (973)
+||||+++|+|..++... ...+++..+..++.|+++|++||| +++++||||||+||+++.++. +++
T Consensus 81 lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l 153 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRK----SDVLTTPWKFKVAKQLASALSYLE---DKDLVHGNVCTKNILLAREGIDGECGPFIKL 153 (262)
T ss_pred EEEecccCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHhh---hCCeECCCCCcccEEEecCCccCCCCceeEe
Confidence 999999999998888643 235788899999999999999999 889999999999999987664 899
Q ss_pred ecccCCccccCCCCcccccccCcccccccccccc-cCCCCccchHHHHHHHHHHHH-hCCCCCCcccCCCccHHHHHHHh
Q 002063 821 ADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAY-TCKVSEKSDVFSFGVVLLELV-TGRKPVEEEYGDGKDIVYWVSTH 898 (973)
Q Consensus 821 ~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~~l~ell-~g~~pf~~~~~~~~~~~~~~~~~ 898 (973)
+|||++...... ....++..|+|||++. +..++.++|||||||++|||+ +|+.||...... .. ...
T Consensus 154 ~d~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-----~~-~~~ 221 (262)
T cd05077 154 SDPGIPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLA-----EK-ERF 221 (262)
T ss_pred CCCCCCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchh-----HH-HHH
Confidence 999988654321 1235788999999886 566889999999999999998 588888643111 00 000
Q ss_pred hcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 899 LNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
..... ... ......+.+++.+||+.||++||++.+|+++++
T Consensus 222 ~~~~~--------~~~----~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 222 YEGQC--------MLV----TPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred HhcCc--------cCC----CCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 00000 000 111345788999999999999999999998874
No 269
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-35 Score=304.72 Aligned_cols=254 Identities=26% Similarity=0.293 Sum_probs=206.0
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec-----cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~-----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
..+.|..-++||+|+||.||.++.+.+|+-+|.|++.+ ........+|.+|+++++.+.||.+-..|+..+..++
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LCl 262 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCL 262 (591)
T ss_pred cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEE
Confidence 34566777899999999999999999999999997754 3455667889999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
|+..|.||+|.-+|.+. +.+.++..++.-+|.+|+.||++|| ..+||+||+||+|||+|+.|+++|+|+|+|..
T Consensus 263 VLtlMNGGDLkfHiyn~---g~~gF~e~ra~FYAAEi~cGLehlH---~~~iVYRDLKPeNILLDd~GhvRISDLGLAve 336 (591)
T KOG0986|consen 263 VLTLMNGGDLKFHIYNH---GNPGFDEQRARFYAAEIICGLEHLH---RRRIVYRDLKPENILLDDHGHVRISDLGLAVE 336 (591)
T ss_pred EEEeecCCceeEEeecc---CCCCCchHHHHHHHHHHHhhHHHHH---hcceeeccCChhheeeccCCCeEeeccceEEe
Confidence 99999999998888765 4567999999999999999999999 78999999999999999999999999999997
Q ss_pred ccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhh
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
+..+.. ....+||.+|||||++....|+..+|.||+||++|||+.|+.||...... .-...+.......+
T Consensus 337 i~~g~~---~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK--vk~eEvdrr~~~~~----- 406 (591)
T KOG0986|consen 337 IPEGKP---IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK--VKREEVDRRTLEDP----- 406 (591)
T ss_pred cCCCCc---cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhh--hhHHHHHHHHhcch-----
Confidence 765533 33358999999999999999999999999999999999999999764211 11111111111111
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 002063 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRP-----PMREVVKM 949 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 949 (973)
.+.+....++..++-...+++||.+|. .+++|-+|
T Consensus 407 ------~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~H 446 (591)
T KOG0986|consen 407 ------EEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEH 446 (591)
T ss_pred ------hhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhC
Confidence 112233445566777788899999996 45566554
No 270
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=6.3e-34 Score=305.25 Aligned_cols=247 Identities=27% Similarity=0.366 Sum_probs=200.5
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc-------cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-------GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
+|+..+.||+|+||+||+|....+++.||+|.+.... ..+.+.+|++++++++||||+++++++..+...++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4677889999999999999999889999999876532 446788999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++++|.+++... ..+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.+||+|||.+...
T Consensus 81 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~ 152 (258)
T cd06632 81 LELVPGGSLAKLLKKY-----GSFPEPVIRLYTRQILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQV 152 (258)
T ss_pred EEecCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccceec
Confidence 9999999999999753 34788899999999999999999 789999999999999999999999999998765
Q ss_pred cCCCCcccccccCcccccccccccccCC-CCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhh
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYTCK-VSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
.... ......|+..|+|||.+.... ++.++|+||+|+++|++++|+.||.... .......... ....
T Consensus 153 ~~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~-----~~~~~~~~~~-~~~~--- 220 (258)
T cd06632 153 VEFS---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE-----GVAAVFKIGR-SKEL--- 220 (258)
T ss_pred cccc---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc-----HHHHHHHHHh-cccC---
Confidence 4332 123356788999999987766 8899999999999999999999997542 1111111100 0000
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
...+......+.+++.+||+.+|++||++.+++++
T Consensus 221 ------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 221 ------PPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred ------CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 01111234567889999999999999999999865
No 271
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=6.1e-34 Score=309.90 Aligned_cols=251 Identities=25% Similarity=0.357 Sum_probs=195.2
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHH-HHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEI-LGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~-l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
+|++.+.||+|+||.||+|++..+|+.||+|++... ....++..|+.. ++..+||||+++++++..++..|+||||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 81 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV 81 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence 688899999999999999999999999999988753 223445556665 5667899999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCC-CeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSP-PIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~-~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
++ |+|.+++.... .....+++..+..++.|++.|++||| ++ +++||||||+||+++.++.+||+|||++.....
T Consensus 82 ~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 82 MD-TSLDKFYKKVY-DKGLTIPEDILGKIAVSIVKALEYLH---SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hc-ccHHHHHHHhc-cCCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 96 68988887542 23356899999999999999999999 55 899999999999999999999999999876532
Q ss_pred CCCcccccccCccccccccccccc----CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYT----CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
. .......++..|+|||++.+ ..++.++|+||+||++|||++|+.||......... .........
T Consensus 157 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~----~~~~~~~~~---- 225 (283)
T cd06617 157 S---VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQ----LKQVVEEPS---- 225 (283)
T ss_pred c---cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHH----HHHHHhcCC----
Confidence 2 11222457889999998864 45688999999999999999999999643211111 111111000
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
... ........+.+++.+||+.+|++||++.+++++
T Consensus 226 ---~~~---~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 226 ---PQL---PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred ---CCC---CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 011234568899999999999999999999875
No 272
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.1e-34 Score=322.64 Aligned_cols=240 Identities=26% Similarity=0.307 Sum_probs=187.9
Q ss_pred ecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhc---CCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 684 IGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKI---RHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 684 lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l---~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
||+|+||+||+|++..+++.||||++.+. ........|..++.+. +||+|+++++++..+...|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 69999999999999999999999998652 2223345566776665 699999999999999999999999999
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
|+|.+++... ..+++..+..++.|+++||+||| +++|+||||||+||+++.++.++|+|||++........
T Consensus 81 g~L~~~l~~~-----~~~~~~~~~~~~~qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~- 151 (330)
T cd05586 81 GELFWHLQKE-----GRFSEDRAKFYIAELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNK- 151 (330)
T ss_pred ChHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC-
Confidence 9999888642 35788999999999999999999 78999999999999999999999999999875422211
Q ss_pred ccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcccccc
Q 002063 836 SDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVA 914 (973)
Q Consensus 836 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (973)
......||..|+|||++.+. .++.++||||+||++|||++|+.||... +.............. ..
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~-----~~~~~~~~i~~~~~~--------~~ 217 (330)
T cd05586 152 -TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAE-----DTQQMYRNIAFGKVR--------FP 217 (330)
T ss_pred -CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCC-----CHHHHHHHHHcCCCC--------CC
Confidence 12235689999999998754 4789999999999999999999999653 112222211111110 00
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCCCCCC----CHHHHHHH
Q 002063 915 SESIKEDMIKLLKIAVVCTTKLPNLRP----PMREVVKM 949 (973)
Q Consensus 915 ~~~~~~~~~~l~~l~~~cl~~dP~~Rp----t~~evl~~ 949 (973)
. ......+.+++.+|+++||.+|| ++.++++|
T Consensus 218 ~---~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 218 K---NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred C---ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence 0 11234577899999999999998 56777664
No 273
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=6.6e-34 Score=314.80 Aligned_cols=252 Identities=28% Similarity=0.361 Sum_probs=202.9
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc-----cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
+|+..+.||+|+||+||+|....+++.||+|.+.... ..+.+.+|+++++.++||||+++++++..++..|+|||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 6888899999999999999999889999999887632 34568889999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|+++++|.+++... ....+++..+..++.|++.||+||| +.+++||||||+||+++.++.++|+|||++.....
T Consensus 82 ~~~~~~L~~~~~~~---~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 155 (316)
T cd05574 82 YCPGGELFRLLQRQ---PGKCLSEEVARFYAAEVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDV 155 (316)
T ss_pred ecCCCCHHHHHHhC---CCCccCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEEeecchhhcccc
Confidence 99999999998743 2346888999999999999999999 78999999999999999999999999999875432
Q ss_pred CCCcc---------------------------cccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcc
Q 002063 832 SPKVS---------------------------DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEE 884 (973)
Q Consensus 832 ~~~~~---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~ 884 (973)
..... ......|+..|+|||++.+..++.++||||||+++|+|++|+.||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~ 235 (316)
T cd05574 156 EPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGS 235 (316)
T ss_pred cccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCC
Confidence 21100 011236788999999999888999999999999999999999999754
Q ss_pred cCCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCC----HHHHHHH
Q 002063 885 YGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPP----MREVVKM 949 (973)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt----~~evl~~ 949 (973)
... ......... .............+.+++.+|++.||++||+ +.+++++
T Consensus 236 ~~~-----~~~~~~~~~----------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 236 NRD-----ETFSNILKK----------EVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred chH-----HHHHHHhcC----------CccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 211 111111111 1101111114567899999999999999999 7777775
No 274
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.3e-33 Score=302.53 Aligned_cols=248 Identities=27% Similarity=0.380 Sum_probs=201.9
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
+|+..+.||+|+||.||+|....+++.||||.+... .....+.+|++++++++|||++++++.+..++..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 478889999999999999999988999999988653 3456788999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCC-CceEEecccCCccccC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED-YEPKIADFGVAKIAEN 831 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~Dfgl~~~~~~ 831 (973)
+++++|.+++... ....+++..+..++.|++.|++|+| +++++||||+|+||+++++ +.++++|||.+.....
T Consensus 81 ~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~ 154 (256)
T cd08220 81 APGGTLAEYIQKR---CNSLLDEDTILHFFVQILLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSS 154 (256)
T ss_pred CCCCCHHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCC
Confidence 9999999999753 2345788999999999999999999 7899999999999999865 4589999999986643
Q ss_pred CCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccc
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDC 911 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
... .....++..|+|||.+.+..++.++||||+|+++|+|++|+.||.... ............. .
T Consensus 155 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~-----~~~~~~~~~~~~~-------~ 219 (256)
T cd08220 155 KSK---AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAAN-----LPALVLKIMSGTF-------A 219 (256)
T ss_pred Ccc---ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCc-----hHHHHHHHHhcCC-------C
Confidence 321 122457889999999998889999999999999999999999996531 1111111111100 0
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 912 EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 912 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.........+.+++..||+++|++|||+.|++++
T Consensus 220 ----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 220 ----PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred ----CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 0111234568899999999999999999999875
No 275
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=7.7e-34 Score=305.36 Aligned_cols=250 Identities=30% Similarity=0.388 Sum_probs=191.1
Q ss_pred CeecccCcEEEEEEEEcC---CCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEE-eCCeeEEEEEccC
Q 002063 682 NLIGSGGTGKVYRLDLKK---NAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLL-KGGSSFLVLEYMP 754 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~---~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~~lv~e~~~ 754 (973)
+.||+|+||.||+|++.. .+..||+|++... ...+.+.+|+.+++.++||||+++++++. .++..++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 468999999999999753 3457999987542 33567888999999999999999999765 4566899999999
Q ss_pred CCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCC
Q 002063 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~ 834 (973)
+|+|.+++... ....++..+..++.|++.|++||| +.+++||||||+||++++++.+||+|||+++.......
T Consensus 81 ~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~ 153 (262)
T cd05058 81 HGDLRNFIRSE----THNPTVKDLIGFGLQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY 153 (262)
T ss_pred CCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCccccccccCCcc
Confidence 99999999753 223567788899999999999999 78999999999999999999999999999875533211
Q ss_pred c--ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhC-CCCCCcccCCCccHHHHHHHhhcccccchhhccc
Q 002063 835 V--SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTG-RKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDC 911 (973)
Q Consensus 835 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
. .......++..|+|||++.+..++.++|||||||++|||++| ..||... .... .......... .
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~--~~~~---~~~~~~~~~~-------~ 221 (262)
T cd05058 154 YSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV--DSFD---ITVYLLQGRR-------L 221 (262)
T ss_pred eeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCC--CHHH---HHHHHhcCCC-------C
Confidence 1 111123456789999999888899999999999999999995 5556432 1111 1111111100 0
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 912 EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 912 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
......+..+.+++.+||+.+|++||++.|+++.++++.
T Consensus 222 ----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 222 ----LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred ----CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 001112346889999999999999999999999998764
No 276
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=5.2e-34 Score=309.91 Aligned_cols=253 Identities=26% Similarity=0.359 Sum_probs=202.4
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
++|++.+.||+|+||+||+|.+..++..||+|++... ...+.+.+|++++++++||||+++++++..+...|+||||+
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFC 84 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeecc
Confidence 4688999999999999999999888999999988653 34567889999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++++|.+++... ...+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++|+|||.+.......
T Consensus 85 ~~~~L~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (280)
T cd06611 85 DGGALDSIMLEL----ERGLTEPQIRYVCRQMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL 157 (280)
T ss_pred CCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEccCccchhhcccc
Confidence 999999998753 235889999999999999999999 7899999999999999999999999999886543221
Q ss_pred CcccccccCcccccccccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhh
Q 002063 834 KVSDYSCFAGTHGYIAPELAY-----TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
. ......++..|+|||++. +..++.++||||+|+++|||++|+.||..... ............
T Consensus 158 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~----- 225 (280)
T cd06611 158 Q--KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNP-----MRVLLKILKSEP----- 225 (280)
T ss_pred c--ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH-----HHHHHHHhcCCC-----
Confidence 1 222346889999999874 34567899999999999999999999975421 111111111110
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
+.. ..+......+.+++.+||+.+|++||++.+++++-.
T Consensus 226 --~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~ 264 (280)
T cd06611 226 --PTL--DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPF 264 (280)
T ss_pred --CCc--CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChh
Confidence 000 011123446788999999999999999999988743
No 277
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=7.4e-34 Score=309.02 Aligned_cols=253 Identities=26% Similarity=0.344 Sum_probs=199.1
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhc-CCCceeeEeEEEEe------CCe
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKI-RHRNILKLYACLLK------GGS 745 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~------~~~ 745 (973)
..+.|++.+.||+|+||.||+|++..+++.||+|+.... ....++..|+.+++++ +||||+++++++.. +..
T Consensus 14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 93 (282)
T cd06636 14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQ 93 (282)
T ss_pred hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCE
Confidence 346889999999999999999999988999999987653 3445678899999998 79999999999853 457
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccC
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
.|++|||+++|+|.+++... ....+++..+..++.|++.|++||| +.+++||||+|+||++++++.++|+|||+
T Consensus 94 ~~iv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dl~~~nili~~~~~~~l~dfg~ 167 (282)
T cd06636 94 LWLVMEFCGAGSVTDLVKNT---KGNALKEDWIAYICREILRGLAHLH---AHKVIHRDIKGQNVLLTENAEVKLVDFGV 167 (282)
T ss_pred EEEEEEeCCCCcHHHHHHHc---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCcc
Confidence 89999999999999998753 2234778888899999999999999 78999999999999999999999999999
Q ss_pred CccccCCCCcccccccCcccccccccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhc
Q 002063 826 AKIAENSPKVSDYSCFAGTHGYIAPELAY-----TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLN 900 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~ 900 (973)
+....... .......|+..|+|||++. +..++.++||||+||++|||++|+.||...... ... ... .
T Consensus 168 ~~~~~~~~--~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~----~~~-~~~-~ 239 (282)
T cd06636 168 SAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM----RAL-FLI-P 239 (282)
T ss_pred hhhhhccc--cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHH----hhh-hhH-h
Confidence 87553221 1122356889999999875 346788999999999999999999999643210 000 000 0
Q ss_pred ccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 901 NHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.. ... ..........+.+++.+||+.||.+||++.|++++
T Consensus 240 ~~------~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 240 RN------PPP---KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred hC------CCC---CCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 00 000 01112334568899999999999999999999865
No 278
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=8.5e-35 Score=288.80 Aligned_cols=207 Identities=27% Similarity=0.374 Sum_probs=177.2
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCc----eEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEe-CC
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAG----TVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLK-GG 744 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~----~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~ 744 (973)
....|+.+..||+|.||.||+|..+++.. .+|+|+++.+ ......-||+..++.++|||++.+..+|.. +.
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 45678999999999999999997765432 6899998765 344567899999999999999999999876 88
Q ss_pred eeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCC----CceEE
Q 002063 745 SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED----YEPKI 820 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~----~~~kl 820 (973)
.+++++||.++ +|++.++-+.......++...+..|..||+.|+.||| ++=|+|||+||.||||..+ |.|||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH---~NWvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH---SNWVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh---hhheeeccCCcceEEEeccCCccCeeEe
Confidence 99999999977 8999998775555567899999999999999999999 7779999999999999887 89999
Q ss_pred ecccCCccccCCCCcc-cccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcc
Q 002063 821 ADFGVAKIAENSPKVS-DYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEE 884 (973)
Q Consensus 821 ~Dfgl~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~ 884 (973)
+|||+++.+.+.-... .....+-|..|+|||.+.|. .|+.+.||||.||++.||+|-++.|.+.
T Consensus 178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~ 243 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGR 243 (438)
T ss_pred ecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccch
Confidence 9999999887654433 33446679999999998765 5899999999999999999998888654
No 279
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=9.8e-34 Score=305.06 Aligned_cols=250 Identities=22% Similarity=0.324 Sum_probs=198.0
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc--------ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--------DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~--------~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
+|++.+.||+|+||+||+|... +++.+|||.+... .....+.+|++++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI 79 (265)
T ss_pred CccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence 4788899999999999999875 5889999987642 123557889999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++++|.+++.+. ..+++..+..++.|++.|++|+| +.+++|+||+|+||+++.++.++|+|||.+..
T Consensus 80 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 151 (265)
T cd06631 80 FMEFVPGGSISSILNRF-----GPLPEPVFCKYTKQILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARR 151 (265)
T ss_pred EEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEeccchhhHh
Confidence 99999999999999753 24678888999999999999999 78999999999999999999999999999875
Q ss_pred ccCCCC----cccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccccc
Q 002063 829 AENSPK----VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 829 ~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
...... ........|+..|+|||++.+..++.++||||+||++|+|++|+.||..... .... .........
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~----~~~~-~~~~~~~~~ 226 (265)
T cd06631 152 LAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDR----LAAM-FYIGAHRGL 226 (265)
T ss_pred hhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCCh----HHHH-HHhhhccCC
Confidence 532111 1112234588899999999988899999999999999999999999965311 0000 000000000
Q ss_pred chhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
. + .........+.+++.+|++.+|++||++.+++++
T Consensus 227 ~-----~----~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 227 M-----P----RLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred C-----C----CCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0 0 1112234567899999999999999999999864
No 280
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=9.1e-34 Score=309.84 Aligned_cols=264 Identities=22% Similarity=0.271 Sum_probs=197.7
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc---cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
.++|++.+.||+|++|+||+|+.+.+++.||||.+.... ....+.+|++++++++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence 467899999999999999999999889999999886532 23456789999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|++ ++|.+++... ...+++..+..++.|+++||+||| +.+++||||||+||+++.++.++|+|||+++....
T Consensus 84 ~~~-~~L~~~~~~~----~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 155 (291)
T cd07844 84 YLD-TDLKQYMDDC----GGGLSMHNVRLFLFQLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLADFGLARAKSV 155 (291)
T ss_pred cCC-CCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEECccccccccCC
Confidence 997 5999988753 235788999999999999999999 78999999999999999999999999999875432
Q ss_pred CCCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccc-ccc----
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH-ENV---- 905 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~---- 905 (973)
... ......++..|+|||++.+ ..++.++||||+|+++|||++|+.||............... ..... ...
T Consensus 156 ~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 232 (291)
T cd07844 156 PSK--TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFR-VLGTPTEETWPGV 232 (291)
T ss_pred CCc--cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHH-hcCCCChhhhhhh
Confidence 211 1122346789999999865 45789999999999999999999999654211111110000 00000 000
Q ss_pred ---hhhcc---ccccCh----hhHHH--HHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 906 ---LKVLD---CEVASE----SIKED--MIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 906 ---~~~~~---~~~~~~----~~~~~--~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
..... ...... ..... ...+.+++.+|++++|++||++.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 233 SSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred hhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 00000 000000 00011 2567789999999999999999999864
No 281
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.3e-33 Score=307.98 Aligned_cols=262 Identities=26% Similarity=0.334 Sum_probs=202.0
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc----cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
+|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|+.++++++||||+++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4788899999999999999999889999999886532 346788999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
+ +++|.+++... ...+++..+..++.|+++||+||| +.+++|+||||+||+++.++.++++|||.+......
T Consensus 81 ~-~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~ 152 (286)
T cd07832 81 M-PSDLSEVLRDE----ERPLPEAQVKSYMRMLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEE 152 (286)
T ss_pred c-CCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCC
Confidence 9 99999998753 245889999999999999999999 789999999999999999999999999998866433
Q ss_pred CCcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccc--------
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE-------- 903 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~-------- 903 (973)
.. .......++..|+|||++.+. .++.++||||+|+++|||++|+.||.... +..... .+........
T Consensus 153 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07832 153 EP-RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEN-DIEQLA-IVFRTLGTPNEETWPGLT 229 (286)
T ss_pred CC-CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCC-HHHHHH-HHHHHcCCCChHHHhhcc
Confidence 21 122335688999999998654 46889999999999999999988875431 111111 1111100000
Q ss_pred ---cchhhcccccc----ChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 904 ---NVLKVLDCEVA----SESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 904 ---~~~~~~~~~~~----~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
........... .....+....+.+++.+|++++|++||+++++++|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 230 SLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred CcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00000000000 00111234678899999999999999999999876
No 282
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=9.7e-34 Score=306.90 Aligned_cols=258 Identities=26% Similarity=0.350 Sum_probs=202.2
Q ss_pred cCCcccCeecccCcEEEEEEEEcC-----CCceEEEEEeeccc---cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKK-----NAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~-----~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
++|++.+.||+|+||+||+|+.+. +.+.||+|.+.... ..+.+.+|++++++++||||+++++++.+....+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 467888999999999999999753 34679999876533 2467899999999999999999999999988999
Q ss_pred EEEEccCCCchHHHHHhhhcCC----CCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEG----KPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADF 823 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~----~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 823 (973)
+||||+++|+|.+++....... ...+++..+..++.|++.|++||| +.+++||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS---NARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh---hcCcccCcCccceEEEeCCCcEEEccc
Confidence 9999999999999997642111 125899999999999999999999 789999999999999999999999999
Q ss_pred cCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhccc
Q 002063 824 GVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNH 902 (973)
Q Consensus 824 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~ 902 (973)
|++....... ........++..|+|||.+.+..++.++||||||+++|++++ |..||.... ....... .....
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~--~~~~~~~---~~~~~ 235 (275)
T cd05046 162 SLSKDVYNSE-YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLS--DEEVLNR---LQAGK 235 (275)
T ss_pred ccccccCccc-ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccc--hHHHHHH---HHcCC
Confidence 9986443221 112223456778999999988888999999999999999999 888986431 1111111 11000
Q ss_pred ccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 903 ENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
. ...........+.+++.+|++.+|++||++.|++++|.+
T Consensus 236 ~----------~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 236 L----------ELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred c----------CCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 0 000111233468899999999999999999999998863
No 283
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=9.8e-34 Score=306.84 Aligned_cols=256 Identities=29% Similarity=0.373 Sum_probs=202.3
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCC------e
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKI-RHRNILKLYACLLKGG------S 745 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~------~ 745 (973)
..++|++.+.||+|++|+||+|.+..+++.||+|++... ...+++.+|+++++++ +||||+++++++.... .
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 83 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQ 83 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceE
Confidence 457899999999999999999999988999999988763 3456788999999999 7999999999997644 4
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccC
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
.++||||+++++|.+++.... .....+++..+..++.|++.|++||| +.+++||||+|+||++++++.++++|||.
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~~l~p~ni~~~~~~~~~l~d~~~ 159 (275)
T cd06608 84 LWLVMELCGGGSVTDLVKGLR-KKGKRLKEEWIAYILRETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKLVDFGV 159 (275)
T ss_pred EEEEEEcCCCCcHHHHHHHHh-hcCCCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEEccCCeEEECCCcc
Confidence 899999999999999987542 12346789999999999999999999 78999999999999999999999999999
Q ss_pred CccccCCCCcccccccCccccccccccccc-----CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhc
Q 002063 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYT-----CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLN 900 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~ 900 (973)
+....... .......|+..|+|||++.. ..++.++||||+||++|+|++|+.||..... .. .......
T Consensus 160 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-~~----~~~~~~~ 232 (275)
T cd06608 160 SAQLDSTL--GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHP-MR----ALFKIPR 232 (275)
T ss_pred ceecccch--hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccch-HH----HHHHhhc
Confidence 87654322 12223458889999998753 3467889999999999999999999964311 11 1111110
Q ss_pred ccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 901 NHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.. . ... .........+.+++.+|++.||++|||+.+++++
T Consensus 233 ~~--~-----~~~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 233 NP--P-----PTL--KSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred cC--C-----CCC--CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 00 0 000 1122345678899999999999999999999875
No 284
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=8.9e-34 Score=306.27 Aligned_cols=255 Identities=26% Similarity=0.335 Sum_probs=200.8
Q ss_pred cCCcccCeecccCcEEEEEEEEcCC---CceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKN---AGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~---~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
.+|++.+.||+|+||.||+|.+... ...||||..... ...+.+.+|++++++++||||+++++++.+ ...|+|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 4578889999999999999997643 346899987653 234578899999999999999999998865 457899
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++|+|.+++... ...+++..+..++.|++.|++|+| +.+++||||||+||+++.++.++++|||++...
T Consensus 85 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 85 MELAPLGELRSYLQVN----KYSLDLASLILYSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYL 157 (270)
T ss_pred EEcCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccChheEEEecCCCeEEccCceeeec
Confidence 9999999999999753 235789999999999999999999 789999999999999999999999999998765
Q ss_pred cCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhh
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
...... ......++..|+|||.+.+..++.++||||||+++||+++ |+.||..... ......+. .....
T Consensus 158 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~--~~~~~~~~----~~~~~--- 227 (270)
T cd05056 158 EDESYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKN--NDVIGRIE----NGERL--- 227 (270)
T ss_pred ccccce-ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHH----cCCcC---
Confidence 433211 1112234568999999988889999999999999999996 9999965421 11111111 11100
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
..+......+.+++.+|+.++|++||++.++++.|+++..
T Consensus 228 -------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 228 -------PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred -------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0112234568889999999999999999999999988654
No 285
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.1e-33 Score=305.25 Aligned_cols=253 Identities=24% Similarity=0.354 Sum_probs=202.3
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc--------cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD--------GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~--------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
+|+..+.||+|+||.||+|....+++.||+|++.... ..+.+.+|++++++++||||+++++++.+++..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 4778899999999999999999889999999886522 34578899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCC-ceEEecccCCc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY-EPKIADFGVAK 827 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfgl~~ 827 (973)
||||+++++|.+++... ..+++..+..++.|++.|++||| +.+++||||+|+||+++.++ .++|+|||.+.
T Consensus 81 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~ 152 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY-----GAFKEAVIINYTEQLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAA 152 (268)
T ss_pred EEeccCCCcHHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccccccc
Confidence 99999999999998753 25788899999999999999999 78999999999999998776 59999999987
Q ss_pred cccCCCCc--ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccc
Q 002063 828 IAENSPKV--SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 828 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
........ .......++..|+|||++.+..++.++||||+|+++|++++|..||..... ..........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~------- 223 (268)
T cd06630 153 RLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKH--SNHLALIFKI------- 223 (268)
T ss_pred ccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC--cchHHHHHHH-------
Confidence 66433111 111234578899999999888899999999999999999999999964321 1111111100
Q ss_pred hhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.........+......+.+++.+|++.+|++||++.+++++
T Consensus 224 ---~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 224 ---ASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred ---hccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 00011112223445678899999999999999999999864
No 286
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=319.37 Aligned_cols=270 Identities=27% Similarity=0.307 Sum_probs=207.7
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeec---cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCC------eeE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK---GDGVKVFAAEMEILGKIRHRNILKLYACLLKGG------SSF 747 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~------~~~ 747 (973)
.+...+.||+|+||.||+|+++.+|+.||||.+.. ....++..+|++++++++|||||+++++-++.. ...
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 45667889999999999999999999999998877 456677889999999999999999999876543 568
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeec--CCCc--eEEecc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD--EDYE--PKIADF 823 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~--~~~~--~kl~Df 823 (973)
+|||||.+|||+..+.+ .+....++..+++.+...++.||.||| +++||||||||.||++- .+|+ .||+||
T Consensus 94 lvmEyC~gGsL~~~L~~--PEN~~GLpE~e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKLtDf 168 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNS--PENAYGLPESEFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDF 168 (732)
T ss_pred EEEeecCCCcHHHHhcC--cccccCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEeeecc
Confidence 99999999999999985 344456899999999999999999999 88999999999999973 4454 799999
Q ss_pred cCCccccCCCCcccccccCcccccccccccc-cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccc
Q 002063 824 GVAKIAENSPKVSDYSCFAGTHGYIAPELAY-TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH 902 (973)
Q Consensus 824 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~ 902 (973)
|.|+..+.+. .....+||..|.+||++. .+.|+..+|.|||||++|+++||..||....+.......+.....+..
T Consensus 169 G~Arel~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp 245 (732)
T KOG4250|consen 169 GAARELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKP 245 (732)
T ss_pred cccccCCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCC
Confidence 9999776553 455689999999999998 488999999999999999999999999876544332222222222221
Q ss_pred ccchhhccc------------cccChhhHHHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHhhcCC
Q 002063 903 ENVLKVLDC------------EVASESIKEDMIKLLKIAVVCTTKLPNLRP--PMREVVKMLADAD 954 (973)
Q Consensus 903 ~~~~~~~~~------------~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp--t~~evl~~L~~~~ 954 (973)
....-.... .............+...+..++..+|.+|. .+.+..+.+.++.
T Consensus 246 ~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL 311 (732)
T KOG4250|consen 246 SGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDIL 311 (732)
T ss_pred CceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHH
Confidence 111111110 111112334445566677788899999998 6666666555543
No 287
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2.6e-34 Score=308.05 Aligned_cols=239 Identities=21% Similarity=0.329 Sum_probs=187.2
Q ss_pred CeecccCcEEEEEEEEcCCCc-------eEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 682 NLIGSGGTGKVYRLDLKKNAG-------TVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~-------~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
+.||+|+||.||+|.....+. .||+|..... ...+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 368999999999999865443 4888877543 2345678899999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCc--------eEEeccc
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE--------PKIADFG 824 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~--------~kl~Dfg 824 (973)
+++|+|.+++... ...+++..+..++.|++.|++||| +.+++||||||+||+++.++. ++++|||
T Consensus 81 ~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g 153 (258)
T cd05078 81 VKFGSLDTYLKKN----KNLINISWKLEVAKQLAWALHFLE---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG 153 (258)
T ss_pred CCCCcHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEecccccccCCCceEEecccc
Confidence 9999999999753 235788899999999999999999 789999999999999987765 6999999
Q ss_pred CCccccCCCCcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCC-CCCCcccCCCccHHHHHHHhhccc
Q 002063 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGR-KPVEEEYGDGKDIVYWVSTHLNNH 902 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~-~pf~~~~~~~~~~~~~~~~~~~~~ 902 (973)
.+...... ....++..|+|||++.+. .++.++||||+||++|||++|. .||..... ..... .....
T Consensus 154 ~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~-----~~~~~-~~~~~ 221 (258)
T cd05078 154 ISITVLPK------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS-----QKKLQ-FYEDR 221 (258)
T ss_pred cccccCCc------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccH-----HHHHH-HHHcc
Confidence 88654322 224578899999998764 5788999999999999999985 55543211 11100 00000
Q ss_pred ccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 903 ENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
. . .+.....++.+++.+||+.+|++||+++++++.|+
T Consensus 222 ~--------~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 222 H--------Q----LPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred c--------c----CCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0 0 01112346789999999999999999999999874
No 288
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.5e-33 Score=308.05 Aligned_cols=256 Identities=29% Similarity=0.343 Sum_probs=200.9
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeC-----Cee
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKI-RHRNILKLYACLLKG-----GSS 746 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~-----~~~ 746 (973)
..++|++.+.||+|+||.||+|....+++.||+|++... .....+.+|+.+++++ +|||++++++++... +..
T Consensus 20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~ 99 (291)
T cd06639 20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQL 99 (291)
T ss_pred CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCee
Confidence 467899999999999999999999988999999988653 3345678899999999 899999999998653 358
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
|+||||+++|+|.++++... .....+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|+|||.+
T Consensus 100 ~lv~ey~~~~sL~~~~~~~~-~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~nili~~~~~~kl~dfg~~ 175 (291)
T cd06639 100 WLVLELCNGGSVTELVKGLL-ICGQRLDEAMISYILYGALLGLQHLH---NNRIIHRDVKGNNILLTTEGGVKLVDFGVS 175 (291)
T ss_pred EEEEEECCCCcHHHHHHHhh-hcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEeecccc
Confidence 99999999999999987532 23345789999999999999999999 789999999999999999999999999998
Q ss_pred ccccCCCCcccccccCcccccccccccccC-----CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcc
Q 002063 827 KIAENSPKVSDYSCFAGTHGYIAPELAYTC-----KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNN 901 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 901 (973)
........ ......|+..|+|||++... .++.++||||+||++|||++|+.||..... ...+......
T Consensus 176 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~-----~~~~~~~~~~ 248 (291)
T cd06639 176 AQLTSTRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP-----VKTLFKIPRN 248 (291)
T ss_pred hhcccccc--cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH-----HHHHHHHhcC
Confidence 76543221 11224578899999987543 367899999999999999999999965321 1111111101
Q ss_pred cccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 902 HENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.. .... ...+....+.+++.+|++.+|++||++.|++++
T Consensus 249 ~~--~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 249 PP--PTLL-------HPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred CC--CCCC-------cccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 00 0011 112233468899999999999999999999876
No 289
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.2e-33 Score=312.97 Aligned_cols=269 Identities=22% Similarity=0.275 Sum_probs=201.3
Q ss_pred CCcccCeecccCcEEEEEEEEcC--CCceEEEEEeec-----cccHHHHHHHHHHHHhcCCCceeeEeEEEEeC--CeeE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKK--NAGTVAVKQLWK-----GDGVKVFAAEMEILGKIRHRNILKLYACLLKG--GSSF 747 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~--~~~~vavK~~~~-----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~ 747 (973)
+|++.+.||+|+||.||+|+... +++.||+|.+.. ....+.+.+|++++++++||||+++++++.+. ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 47888999999999999999988 789999999876 33346678899999999999999999999887 8899
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC----CCceEEecc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE----DYEPKIADF 823 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~----~~~~kl~Df 823 (973)
+||||++ +++.+++..........++...+..++.|++.|++||| +.+++||||||+||+++. ++.+|++||
T Consensus 81 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH---SNWVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 9999996 47777776543333446888999999999999999999 789999999999999999 899999999
Q ss_pred cCCccccCCCC-cccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCc--------cHHH
Q 002063 824 GVAKIAENSPK-VSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGK--------DIVY 893 (973)
Q Consensus 824 gl~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~--------~~~~ 893 (973)
|++........ ........++..|+|||++.+. .++.++|||||||++|+|++|+.||.....+.. ....
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99886643322 1122234578899999987664 578999999999999999999999976533220 0000
Q ss_pred HHHHhh----------cccccchh---hcc-ccccChh-----hH--HHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 894 WVSTHL----------NNHENVLK---VLD-CEVASES-----IK--EDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 894 ~~~~~~----------~~~~~~~~---~~~-~~~~~~~-----~~--~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.+.... ........ ... ....... .. ....++.+++.+|+++||++|||+.|++++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 000000 00000000 000 0000000 00 234568899999999999999999999875
No 290
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.5e-33 Score=302.63 Aligned_cols=238 Identities=22% Similarity=0.362 Sum_probs=190.0
Q ss_pred CeecccCcEEEEEEEEcCCC----------ceEEEEEeecccc-HHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 682 NLIGSGGTGKVYRLDLKKNA----------GTVAVKQLWKGDG-VKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~----------~~vavK~~~~~~~-~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
+.||+|+||.||+|.+..++ ..|++|.+..... ...+.+|+.++++++||||+++++++.. ...++||
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 46899999999999998765 3588887765433 6788999999999999999999999887 7789999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCC-------ceEEecc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY-------EPKIADF 823 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-------~~kl~Df 823 (973)
||+++|+|.+++... ...+++..+..++.|++.||+||| +++++||||||+||+++.++ .++++||
T Consensus 80 e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Df 152 (259)
T cd05037 80 EYVKFGPLDVFLHRE----KNNVSLHWKLDVAKQLASALHYLE---DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDP 152 (259)
T ss_pred EcCCCCcHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHh---hCCeecccCccceEEEecCccccCCceeEEeCCC
Confidence 999999999999764 125788899999999999999999 78999999999999999887 7999999
Q ss_pred cCCccccCCCCcccccccCcccccccccccccC--CCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhc
Q 002063 824 GVAKIAENSPKVSDYSCFAGTHGYIAPELAYTC--KVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLN 900 (973)
Q Consensus 824 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~ 900 (973)
|++...... ....++..|+|||++.+. .++.++||||+||++||+++ |..||..... .....+..
T Consensus 153 g~a~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~--~~~~~~~~---- 220 (259)
T cd05037 153 GIPITVLSR------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS--SEKERFYQ---- 220 (259)
T ss_pred Ccccccccc------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc--hhHHHHHh----
Confidence 998765431 123467789999998776 78899999999999999999 5777765421 11111111
Q ss_pred ccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 901 NHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.... ... .....+.+++.+||..+|++||++.++++.|+
T Consensus 221 ~~~~---------~~~---~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 221 DQHR---------LPM---PDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred cCCC---------CCC---CCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0000 000 00156889999999999999999999998874
No 291
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.7e-33 Score=301.89 Aligned_cols=250 Identities=30% Similarity=0.414 Sum_probs=201.3
Q ss_pred CcccCeecccCcEEEEEEEEcCCC----ceEEEEEeeccc---cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKKNA----GTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~~~----~~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
+++.+.||+|+||.||+|++...+ ..||+|++.... ..+.+.+|++++++++||||+++++++.+.+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 356788999999999999998766 889999987643 4667889999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++++|.+++.... ...+++..+..++.|++.|++||| +.+++||||+|+||+++.++.++++|||.+....
T Consensus 81 e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~ 154 (258)
T smart00219 81 EYMEGGDLLDYLRKNR---PKELSLSDLLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLY 154 (258)
T ss_pred eccCCCCHHHHHHhhh---hccCCHHHHHHHHHHHHHHHHHHh---cCCeeecccccceEEEccCCeEEEcccCCceecc
Confidence 9999999999997531 112789999999999999999999 7899999999999999999999999999998665
Q ss_pred CCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhc
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
........ ...++..|+|||.+.+..++.++||||+|+++|+|++ |+.||... . .............
T Consensus 155 ~~~~~~~~-~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~--~---~~~~~~~~~~~~~------ 222 (258)
T smart00219 155 DDDYYKKK-GGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM--S---NEEVLEYLKKGYR------ 222 (258)
T ss_pred cccccccc-cCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--C---HHHHHHHHhcCCC------
Confidence 44221111 2236789999999988889999999999999999998 78888642 1 1111111111110
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.........++.+++.+|+..+|++|||+.++++.|
T Consensus 223 -----~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 223 -----LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -----CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 011112455688899999999999999999998764
No 292
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.6e-33 Score=305.48 Aligned_cols=248 Identities=26% Similarity=0.379 Sum_probs=200.2
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeec---cccHHHHHHHHHHHHhcC---CCceeeEeEEEEeCCeeEEEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK---GDGVKVFAAEMEILGKIR---HRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~---~~~~~~~~~E~~~l~~l~---hpniv~l~~~~~~~~~~~lv~ 750 (973)
.|+..+.||+|+||.||+|.+..+++.||+|.+.. ....+++.+|++++++++ |||++++++++..+...++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 47778899999999999999998899999998764 234567889999999996 999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++++|.+++... .+++..+..++.|++.|++||| +.+++||||+|+||+++.++.++++|||++....
T Consensus 82 e~~~~~~L~~~~~~~------~l~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06917 82 EYAEGGSVRTLMKAG------PIAEKYISVIIREVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLN 152 (277)
T ss_pred ecCCCCcHHHHHHcc------CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHHEEEcCCCCEEEccCCceeecC
Confidence 999999999988642 5789999999999999999999 7899999999999999999999999999998765
Q ss_pred CCCCcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhc
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
.... ......|+..|+|||++.++ .++.++|||||||++|+|++|+.||..... .......... .
T Consensus 153 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-----~~~~~~~~~~-------~ 218 (277)
T cd06917 153 QNSS--KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDA-----FRAMMLIPKS-------K 218 (277)
T ss_pred CCcc--ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCCh-----hhhhhccccC-------C
Confidence 4331 22334688899999988654 468899999999999999999999975421 1111111000 0
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.+.... ......+.+++.+||+.||++||++.+++++-
T Consensus 219 ~~~~~~---~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~ 256 (277)
T cd06917 219 PPRLED---NGYSKLLREFVAACLDEEPKERLSAEELLKSK 256 (277)
T ss_pred CCCCCc---ccCCHHHHHHHHHHcCCCcccCcCHHHHhhCh
Confidence 011111 11345688899999999999999999998753
No 293
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=2e-33 Score=303.79 Aligned_cols=238 Identities=23% Similarity=0.338 Sum_probs=184.5
Q ss_pred eecccCcEEEEEEEEcCC------------------------CceEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeE
Q 002063 683 LIGSGGTGKVYRLDLKKN------------------------AGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKL 736 (973)
Q Consensus 683 ~lG~G~~g~Vy~a~~~~~------------------------~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l 736 (973)
.||+|+||.||+|....+ ...||+|++... .....+.+|+++++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 589999999999986321 235888987653 234567889999999999999999
Q ss_pred eEEEEeCCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCC
Q 002063 737 YACLLKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY 816 (973)
Q Consensus 737 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~ 816 (973)
++++..+...++||||+++|+|..++... ...+++..+..++.|+++||+||| +++|+||||||+||+++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~Nill~~~~ 154 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE----KGRVPVAWKITVAQQLASALSYLE---DKNLVHGNVCAKNILLARLG 154 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---cCCccCCCCCcccEEEeccC
Confidence 99999999999999999999999888642 345788889999999999999999 78999999999999997643
Q ss_pred -------ceEEecccCCccccCCCCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHH-hCCCCCCcccCC
Q 002063 817 -------EPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELV-TGRKPVEEEYGD 887 (973)
Q Consensus 817 -------~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell-~g~~pf~~~~~~ 887 (973)
.++++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++||++ +|+.||.....
T Consensus 155 ~~~~~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~- 227 (274)
T cd05076 155 LAEGTSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTP- 227 (274)
T ss_pred cccCccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccCh-
Confidence 3899999987643221 12346788999998865 56889999999999999995 69999865321
Q ss_pred CccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 888 GKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
........ ..... . ......+.+++.+||+.+|++||++.++++.|.
T Consensus 228 -~~~~~~~~----~~~~~--------~----~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 228 -SEKERFYE----KKHRL--------P----EPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred -HHHHHHHH----hccCC--------C----CCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 11111111 00000 0 011235788999999999999999999999874
No 294
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2.4e-33 Score=304.01 Aligned_cols=246 Identities=28% Similarity=0.412 Sum_probs=200.7
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
-|+..+.||+|+||.||+|.+..+++.||||..... ...+.+.+|++++++++||||+++++++..++..|+||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 467788999999999999999888999999987643 23456888999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++++|.+++.. ..+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.++++|||++.......
T Consensus 85 ~~~~l~~~i~~------~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06641 85 GGGSALDLLEP------GPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 155 (277)
T ss_pred CCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeecccceecccch
Confidence 99999998863 24789999999999999999999 7899999999999999999999999999987654322
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
. ......++..|+|||.+.+..++.++||||+||++|+|++|..||..... ............
T Consensus 156 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~~~~---------- 218 (277)
T cd06641 156 I--KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP-----MKVLFLIPKNNP---------- 218 (277)
T ss_pred h--hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch-----HHHHHHHhcCCC----------
Confidence 1 12234578899999999888889999999999999999999999964311 111111110100
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
..........+.+++.+|++.+|++||++.+++++
T Consensus 219 -~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 219 -PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred -CCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 11112234567889999999999999999999996
No 295
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.8e-33 Score=307.24 Aligned_cols=250 Identities=24% Similarity=0.326 Sum_probs=203.0
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec--cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK--GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
..+|++.+.||+|+||.||+|....+++.||+|.+.. ....+.+.+|+.++++++|||++++++++..++..|+|+||
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~ 97 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY 97 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence 3688999999999999999999988889999998754 23456788999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
+++++|.+++.+. .+++..+..++.|++.|++||| +++++||||+|+||+++.++.++|+|||++......
T Consensus 98 ~~~~~L~~~~~~~------~l~~~~~~~i~~~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~ 168 (293)
T cd06647 98 LAGGSLTDVVTET------CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 168 (293)
T ss_pred CCCCcHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCEEEccCcceeccccc
Confidence 9999999998742 4678889999999999999999 789999999999999999999999999988755433
Q ss_pred CCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
.. ......+++.|+|||.+.+..++.++|||||||++|++++|+.||........ +...... ..
T Consensus 169 ~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~-----~~~~~~~---------~~ 232 (293)
T cd06647 169 QS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-----LYLIATN---------GT 232 (293)
T ss_pred cc--ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh-----eeehhcC---------CC
Confidence 22 22234688899999999888899999999999999999999999965421100 0000000 00
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
............+.+++.+||+.+|++||++.+++.|
T Consensus 233 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 233 PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0001112234568889999999999999999999987
No 296
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=5e-34 Score=311.10 Aligned_cols=262 Identities=26% Similarity=0.371 Sum_probs=199.6
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc----cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
++|++.+.||+|+||.||+|.+..+++.||+|++.... ..+.+.+|+++++.++||||+++++++..++..|+|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 36888999999999999999999889999999875522 24567889999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|+++++|.++... ...+++..+..++.|+++|++||| +.+++|||++|+||++++++.++++|||++.....
T Consensus 81 ~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07846 81 FVDHTVLDDLEKY-----PNGLDESRVRKYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 152 (286)
T ss_pred cCCccHHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEeeeeeeeccC
Confidence 9999888876653 224789999999999999999999 78999999999999999999999999999876543
Q ss_pred CCCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhc----------
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLN---------- 900 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~---------- 900 (973)
... ......++..|+|||++.+ ..++.++||||||+++|||++|+.||..... .+..........
T Consensus 153 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 228 (286)
T cd07846 153 PGE--VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD--IDQLYHIIKCLGNLIPRHQEIF 228 (286)
T ss_pred Ccc--ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch--HHHHHHHHHHhCCCchhhHHHh
Confidence 321 2223457889999999865 4477899999999999999999999864321 110000000000
Q ss_pred -ccccchhhccccccC-----hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 901 -NHENVLKVLDCEVAS-----ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 901 -~~~~~~~~~~~~~~~-----~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
..........+.... .........+.+++.+||+.+|++||++.+++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 229 QKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred ccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 000000000000000 0112234668899999999999999999999875
No 297
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.4e-33 Score=305.27 Aligned_cols=257 Identities=23% Similarity=0.353 Sum_probs=198.5
Q ss_pred CcccCeecccCcEEEEEEEEcC---CCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCC------
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKK---NAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGG------ 744 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~---~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~------ 744 (973)
|++.+.||+|+||+||+|.+.. +++.||||++..+ ...+++.+|++++++++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 5677899999999999998753 4688999988652 33556889999999999999999999886532
Q ss_pred eeEEEEEccCCCchHHHHHhhhc-CCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecc
Q 002063 745 SSFLVLEYMPNGNLFQALHKRVK-EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADF 823 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~-~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 823 (973)
..++++||+++|+|.+++..... .....+++..+..++.|++.|++||| +.+++||||||+||+++.++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccchhhEEEcCCCCEEECcc
Confidence 24789999999999988754321 12234788899999999999999999 789999999999999999999999999
Q ss_pred cCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhccc
Q 002063 824 GVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNH 902 (973)
Q Consensus 824 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~ 902 (973)
|.++...............++..|++||.+.+..++.++|||||||++|||++ |+.||.... .......+. . .
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~--~~~~~~~~~---~-~ 231 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVE--NSEIYNYLI---K-G 231 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCC--HHHHHHHHH---c-C
Confidence 99886643322222222345678999999988889999999999999999999 888986431 111111111 1 1
Q ss_pred ccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 903 ENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
... .........+.+++.+|++.+|++||++.++++.|+++
T Consensus 232 ~~~----------~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 232 NRL----------KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CcC----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 100 00112345688999999999999999999999999865
No 298
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=2.6e-33 Score=308.47 Aligned_cols=247 Identities=30% Similarity=0.410 Sum_probs=198.1
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
..|+..+.||+|+||+||+|+...+++.||+|++... ...+++.+|+++++.++||||+++++++..++..|+||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 4688899999999999999999988999999988642 23356889999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||++ |++.+++... ...+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++|+|||++....
T Consensus 95 e~~~-g~l~~~~~~~----~~~l~~~~~~~~~~ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~ 166 (307)
T cd06607 95 EYCL-GSASDILEVH----KKPLQEVEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFGSASLVS 166 (307)
T ss_pred HhhC-CCHHHHHHHc----ccCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEECCCCCEEEeecCcceecC
Confidence 9996 6777777543 235789999999999999999999 7899999999999999999999999999987543
Q ss_pred CCCCcccccccCcccccccccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAY---TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
.. ....++..|+|||++. ...++.++||||||+++|||++|+.||.... .............
T Consensus 167 ~~------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~-----~~~~~~~~~~~~~---- 231 (307)
T cd06607 167 PA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-----AMSALYHIAQNDS---- 231 (307)
T ss_pred CC------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCcc-----HHHHHHHHhcCCC----
Confidence 22 1245788999999874 4568889999999999999999999996531 1111111110000
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
+ ..........+.+++.+||+.+|++||++.+++++..
T Consensus 232 ---~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 269 (307)
T cd06607 232 ---P---TLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRF 269 (307)
T ss_pred ---C---CCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChh
Confidence 0 0111234557889999999999999999999998654
No 299
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.7e-33 Score=307.14 Aligned_cols=256 Identities=25% Similarity=0.351 Sum_probs=197.5
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcC-CCceeeEeEEEEeCCeeEEEEEc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIR-HRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
+|+..+.||+|+||+||++++..+++.||+|++... .....+.+|+.++.++. ||||+++++++..+...+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 566778899999999999999999999999988653 33456788999999996 99999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
++ +++.++...........+++..+..++.|++.|++|||+ +.+++||||||+||+++.++.++|+|||++......
T Consensus 85 ~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 85 MD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred cc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 85 466554432212223568899999999999999999994 358999999999999999999999999998765432
Q ss_pred CCcccccccCcccccccccccccC---CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhc
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYTC---KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
.. .....|+..|+|||++.+. .++.++||||+||++|||++|+.||.... ..............
T Consensus 162 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~~~~~~~~~~~~~------ 228 (288)
T cd06616 162 IA---KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN----SVFDQLTQVVKGDP------ 228 (288)
T ss_pred Cc---cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc----hHHHHHhhhcCCCC------
Confidence 11 1223578899999998766 68899999999999999999999996532 11111111111110
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
+.............+.+++.+||+++|++||++.+|+++
T Consensus 229 -~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 229 -PILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred -CcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111111112345578899999999999999999999886
No 300
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=4e-33 Score=304.42 Aligned_cols=245 Identities=26% Similarity=0.329 Sum_probs=201.8
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
++|++.+.||+|+||.||+|++..+++.||+|++... ...+.+.+|++++++++||||+++++++.++...|+||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 3688899999999999999999988999999988652 23456888999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++++|.+++... ..++...+..++.|++.||+||| +.+++||||+|+||+++.++.+||+|||++....
T Consensus 81 e~~~~~~L~~~~~~~-----~~l~~~~~~~~~~qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 152 (290)
T cd05580 81 EYVPGGELFSHLRKS-----GRFPEPVARFYAAQVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVK 152 (290)
T ss_pred ecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEeeCCCccccC
Confidence 999999999998753 35788899999999999999999 7899999999999999999999999999987654
Q ss_pred CCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcc
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
.. .....+++.|+|||.+.+..++.++||||||+++|+|++|+.||.... ..............
T Consensus 153 ~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~------ 216 (290)
T cd05580 153 GR-----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN-----PIQIYEKILEGKVR------ 216 (290)
T ss_pred CC-----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHhcCCcc------
Confidence 33 223457899999999988888999999999999999999999996542 11111111111110
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHh
Q 002063 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRP-----PMREVVKML 950 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~L 950 (973)
.+......+.+++.+||+.+|.+|+ ++.|++++-
T Consensus 217 ------~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~ 255 (290)
T cd05580 217 ------FPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHP 255 (290)
T ss_pred ------CCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCc
Confidence 1111245678899999999999999 778887654
No 301
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=3.5e-33 Score=306.40 Aligned_cols=261 Identities=23% Similarity=0.294 Sum_probs=199.2
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc-------cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-------GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
+|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+|++++++++||||+++++++.++...++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4778889999999999999999889999999986532 123467899999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+ +|+|.+++... ...+++..+..++.|+++||+||| +.+++||||+|+||+++.++.++|+|||++...
T Consensus 81 ~e~~-~~~L~~~i~~~----~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~ 152 (298)
T cd07841 81 FEFM-ETDLEKVIKDK----SIVLTPADIKSYMLMTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARSF 152 (298)
T ss_pred Eccc-CCCHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEEEccceeeeec
Confidence 9999 89999999753 135889999999999999999999 789999999999999999999999999999866
Q ss_pred cCCCCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccc-----
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE----- 903 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~----- 903 (973)
..... ......++..|+|||.+.+ ..++.++||||+||++|||++|..||..... .......... .....
T Consensus 153 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~ 228 (298)
T cd07841 153 GSPNR--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSD-IDQLGKIFEA-LGTPTEENWP 228 (298)
T ss_pred cCCCc--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCcc-HHHHHHHHHH-cCCCchhhhh
Confidence 54321 1222356788999998864 4578899999999999999999877764321 1111111000 00000
Q ss_pred ---cchhhccccc-----cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 904 ---NVLKVLDCEV-----ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 904 ---~~~~~~~~~~-----~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.......... ...........+.+++.+||+++|++||++.|++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 229 GVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred hcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000000000 001112335678899999999999999999999986
No 302
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=4.5e-33 Score=304.32 Aligned_cols=264 Identities=20% Similarity=0.229 Sum_probs=196.7
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
.++|++.+.||+|+||.||+|....+++.||+|++... .....+.+|+++++.++|+||+++.+++..++..|+|||
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 83 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE 83 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence 46789999999999999999999988999999988653 223457789999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|++ +++.+++... ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.++|+|||+++....
T Consensus 84 ~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 155 (291)
T cd07870 84 YMH-TDLAQYMIQH----PGGLHPYNVRLFMFQLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKLADFGLARAKSI 155 (291)
T ss_pred ccc-CCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEEeccccccccCC
Confidence 995 6777776542 234677888899999999999999 78999999999999999999999999999875433
Q ss_pred CCCcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHH-----------hh
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVST-----------HL 899 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~-----------~~ 899 (973)
... ......++..|+|||++.+. .++.++||||+||++|||++|+.||+........+...... ..
T Consensus 156 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07870 156 PSQ--TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVS 233 (291)
T ss_pred CCC--CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhh
Confidence 221 12233568899999998754 57889999999999999999999997542111111111000 00
Q ss_pred cccccchhhccccccChhh------HHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 900 NNHENVLKVLDCEVASESI------KEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~------~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
........... ....... ......+.+++.+|++.||.+|||+.|++.+
T Consensus 234 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 234 KLPNYKPEWFL-PCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred hcccccchhcc-ccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 00000000000 0000000 0113467789999999999999999999865
No 303
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-35 Score=342.23 Aligned_cols=252 Identities=27% Similarity=0.397 Sum_probs=204.0
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeec----cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
++.....||.|.||.||-|...++|+-.|||-+.- ....+.+.+|+.++..++|||+|+++++-.+.+.++|.|||
T Consensus 1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEy 1315 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEY 1315 (1509)
T ss_pred eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHH
Confidence 56778899999999999999999999999997654 23445678999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
|++|+|.+.+... ...++.....+..|++.|++||| ++|||||||||.||+++.+|.+|.+|||.|..+.+.
T Consensus 1316 C~~GsLa~ll~~g-----ri~dE~vt~vyt~qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1316 CEGGSLASLLEHG-----RIEDEMVTRVYTKQLLEGLAYLH---EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred hccCcHHHHHHhc-----chhhhhHHHHHHHHHHHHHHHHH---hcCceecCCCccceeeecCCcEEeecccceeEecCc
Confidence 9999999998753 22455556678899999999999 889999999999999999999999999999988765
Q ss_pred CCc--ccccccCcccccccccccccC---CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 833 PKV--SDYSCFAGTHGYIAPELAYTC---KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 833 ~~~--~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
... .......||+.|||||++.+. ...-++||||+|||+.||+||+.||...+.+ -.+.+.+..
T Consensus 1388 ~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne-~aIMy~V~~---------- 1456 (1509)
T KOG4645|consen 1388 AQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE-WAIMYHVAA---------- 1456 (1509)
T ss_pred hhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch-hHHHhHHhc----------
Confidence 322 223356799999999999643 4567899999999999999999999875322 111221111
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
...+..+.....+=.+++..|+..||.+|+++.|++++--
T Consensus 1457 ----gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f 1496 (1509)
T KOG4645|consen 1457 ----GHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAF 1496 (1509)
T ss_pred ----cCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhc
Confidence 1112223345556678899999999999999999887643
No 304
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-36 Score=338.41 Aligned_cols=442 Identities=28% Similarity=0.336 Sum_probs=305.1
Q ss_pred eEEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCc
Q 002063 75 VTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSIN 154 (973)
Q Consensus 75 v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n 154 (973)
..+||++++.++ ..|..|..+.+|+.|.++.|.|. ..|.+.+++.+|++|+|.+|.+...|.++..+++|+.||+|.|
T Consensus 47 L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~~lP~~~~~lknl~~LdlS~N 124 (1081)
T KOG0618|consen 47 LKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQSLPASISELKNLQYLDLSFN 124 (1081)
T ss_pred eEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhhcCchhHHhhhcccccccchh
Confidence 678889888876 78899999999999999999998 7889999999999999999999999999999999999999999
Q ss_pred ccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccc
Q 002063 155 YFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFP 234 (973)
Q Consensus 155 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p 234 (973)
++. .+|..+..++.+.++..++| ... ..++... ++.+++..|.+.+.++..+..+++ .|||+.|.+...
T Consensus 125 ~f~-~~Pl~i~~lt~~~~~~~s~N-~~~----~~lg~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~~~-- 193 (1081)
T KOG0618|consen 125 HFG-PIPLVIEVLTAEEELAASNN-EKI----QRLGQTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEMEVL-- 193 (1081)
T ss_pred ccC-CCchhHHhhhHHHHHhhhcc-hhh----hhhcccc-chhhhhhhhhcccchhcchhhhhe--eeecccchhhhh--
Confidence 998 78999999999999999999 211 2233333 777778888877777777777666 677777777511
Q ss_pred hhhhcc--------------------ccccEEEeecccCCCCCCccccccccccEEEeeccccccccCCccCCCCCccEE
Q 002063 235 RSIRKL--------------------QKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVF 294 (973)
Q Consensus 235 ~~l~~l--------------------~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 294 (973)
.+..+ ++|+.|+.++|.++...+ . ....+|+++++++|+++ .+|++++.+.+|+.+
T Consensus 194 -dls~~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~-~-p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l 269 (1081)
T KOG0618|consen 194 -DLSNLANLEVLHCERNQLSELEISGPSLTALYADHNPLTTLDV-H-PVPLNLQYLDISHNNLS-NLPEWIGACANLEAL 269 (1081)
T ss_pred -hhhhccchhhhhhhhcccceEEecCcchheeeeccCcceeecc-c-cccccceeeecchhhhh-cchHHHHhcccceEe
Confidence 12222 345556666666662221 1 23467999999999998 677999999999999
Q ss_pred EcccCCCCCCCCCCcCCccccceeeccccccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCC
Q 002063 295 QCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFS 374 (973)
Q Consensus 295 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~ 374 (973)
+..+|++. .+|..+..+++|+.|.+..|.+. .+|..+..++.|++|||..|+|. .+|+.+......
T Consensus 270 ~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~----------- 335 (1081)
T KOG0618|consen 270 NANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNA----------- 335 (1081)
T ss_pred cccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhH-----------
Confidence 99999995 78888889999999999999998 78888888999999999999998 666644333222
Q ss_pred CCCCCcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhh
Q 002063 375 GEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELG 454 (973)
Q Consensus 375 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~ 454 (973)
.|..|+.+.|.+.....-.=..++.|+.|++.+|.++....+.+.++++|+.|+|++|+|.......+.
T Consensus 336 -----------~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~ 404 (1081)
T KOG0618|consen 336 -----------SLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLR 404 (1081)
T ss_pred -----------HHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHh
Confidence 133333344444311111111234555555555555555555556666666666666666633334455
Q ss_pred cCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCC-CccccccCCCCe
Q 002063 455 RLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNI-PRSLSLLSSLNA 533 (973)
Q Consensus 455 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~ 533 (973)
++..|+.|+||+|+++ .+|..+..++.|++|...+|+|. ..| ++..++.|+.+|+|.|+|+... |.... -++|++
T Consensus 405 kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p-~p~Lky 480 (1081)
T KOG0618|consen 405 KLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALP-SPNLKY 480 (1081)
T ss_pred chHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCC-Ccccce
Confidence 6666666666666666 55566666666666666666665 344 5666666666666666665322 22221 266777
Q ss_pred eecCCCccCCCCCchhhccc-CceEEccCC
Q 002063 534 LNLSGNKLTGSIPDNLMKLK-LSSIDLSEN 562 (973)
Q Consensus 534 L~L~~N~l~~~~p~~~~~l~-L~~l~ls~N 562 (973)
|||+||.=.-.--..|..++ +..++++-|
T Consensus 481 LdlSGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 481 LDLSGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred eeccCCcccccchhhhHHhhhhhheecccC
Confidence 77777752212222333333 444555544
No 305
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.8e-34 Score=312.74 Aligned_cols=245 Identities=25% Similarity=0.363 Sum_probs=197.2
Q ss_pred cccCeecccCcEEEEEEEEcCCCceEEE---E---EeeccccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCe--eEEEE
Q 002063 679 EEDNLIGSGGTGKVYRLDLKKNAGTVAV---K---QLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKGGS--SFLVL 750 (973)
Q Consensus 679 ~~~~~lG~G~~g~Vy~a~~~~~~~~vav---K---~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~--~~lv~ 750 (973)
+...+||+|+|-+||+|.+..+|..||= | +.+.+...++|..|+.+|+.++||||++++++|.+... ..+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 3456799999999999999998988873 3 22335566889999999999999999999999987654 78899
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC-CCceEEecccCCccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE-DYEPKIADFGVAKIA 829 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~Dfgl~~~~ 829 (973)
|.+..|+|..|.+++. .++...+..|+.||+.||.|||++ .++|||||||-+||||+. .|.|||+|+|+|+..
T Consensus 123 EL~TSGtLr~Y~kk~~-----~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~ 196 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKHR-----RVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLL 196 (632)
T ss_pred ecccCCcHHHHHHHhc-----cCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHh
Confidence 9999999999999762 466778899999999999999987 789999999999999976 689999999999877
Q ss_pred cCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhc
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
+.... ...+|||.|||||+.. ..|.+.+||||||+.++||+|+.+||.. ....++..+.......+ .-
T Consensus 197 r~s~a----ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsE----C~n~AQIYKKV~SGiKP--~s- 264 (632)
T KOG0584|consen 197 RKSHA----KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSE----CTNPAQIYKKVTSGIKP--AA- 264 (632)
T ss_pred hcccc----ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhh----hCCHHHHHHHHHcCCCH--HH-
Confidence 54422 2368999999999876 7899999999999999999999999963 33334433333222221 00
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
...-.-+.+.+||.+|+.. ...||++.|++++
T Consensus 265 -------l~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 265 -------LSKVKDPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred -------hhccCCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 0111123578899999999 9999999999875
No 306
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=4.1e-33 Score=300.59 Aligned_cols=253 Identities=21% Similarity=0.293 Sum_probs=187.2
Q ss_pred eecccCcEEEEEEEEcCC--CceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCCc
Q 002063 683 LIGSGGTGKVYRLDLKKN--AGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNGN 757 (973)
Q Consensus 683 ~lG~G~~g~Vy~a~~~~~--~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gs 757 (973)
.||+|+||+||+|+.... ...+++|.+... ...+.+.+|+.+++.++||||+++++++......|+||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 589999999999986532 234667765542 345678899999999999999999999999999999999999999
Q ss_pred hHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCccc
Q 002063 758 LFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSD 837 (973)
Q Consensus 758 L~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~ 837 (973)
|.++++.... .....++..+..++.|+++||+||| +.+++||||||+||+++.++.++|+|||++...........
T Consensus 82 L~~~l~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 157 (268)
T cd05086 82 LKSYLSQEQW-HRRNSQLLLLQRMACEIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET 157 (268)
T ss_pred HHHHHHhhhc-ccccccHHHHHHHHHHHHHHHHHHH---HCCeeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence 9999986422 2334667778899999999999999 78999999999999999999999999999764322221122
Q ss_pred ccccCccccccccccccc-------CCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhc
Q 002063 838 YSCFAGTHGYIAPELAYT-------CKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 838 ~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
.....++..|+|||++.. ..++.++|||||||++|||++ |..||.... ............. ....
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~-----~~~~~~~~~~~~~--~~~~ 230 (268)
T cd05086 158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLS-----DREVLNHVIKDQQ--VKLF 230 (268)
T ss_pred ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHhhcc--cccC
Confidence 223467889999998743 245788999999999999997 567875421 1111111111111 1112
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
++.... .....+.+++..|| .+|++||++++|++.|.
T Consensus 231 ~~~~~~----~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 231 KPQLEL----PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCccCC----CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 222211 13346778888999 67999999999998874
No 307
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=6.4e-33 Score=298.54 Aligned_cols=250 Identities=30% Similarity=0.419 Sum_probs=206.8
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc---cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
+|++.+.||+|++|.||+|++..+++.||||++.... ....+.+|++++++++|||++++++++..+...++||||+
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM 81 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence 6788899999999999999999999999999887643 4677899999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCC-CCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCS-PPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~-~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
++++|.+++... ..++...+..++.|+++|++|+| + .+++||||+|+||+++.++.++|+|||.+......
T Consensus 82 ~~~~L~~~l~~~-----~~l~~~~~~~~~~~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~ 153 (264)
T cd06623 82 DGGSLADLLKKV-----GKIPEPVLAYIARQILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENT 153 (264)
T ss_pred CCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEEEccCccceecccC
Confidence 999999999753 45788999999999999999999 7 89999999999999999999999999998866433
Q ss_pred CCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
... .....++..|+|||.+.+..++.++||||||+++|+|++|+.||..... ...............
T Consensus 154 ~~~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~--~~~~~~~~~~~~~~~--------- 220 (264)
T cd06623 154 LDQ--CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ--PSFFELMQAICDGPP--------- 220 (264)
T ss_pred CCc--ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc--cCHHHHHHHHhcCCC---------
Confidence 221 1234578899999999988899999999999999999999999976521 122222222211110
Q ss_pred ccChhhHH-HHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 913 VASESIKE-DMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 913 ~~~~~~~~-~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
...... ....+.+++.+|++++|++||++.+++++
T Consensus 221 --~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 221 --PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred --CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 011112 45678899999999999999999999985
No 308
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-34 Score=288.12 Aligned_cols=251 Identities=25% Similarity=0.299 Sum_probs=203.2
Q ss_pred HHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCee
Q 002063 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSS 746 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 746 (973)
...+++|+..++||+|.||+|.+++-+.+++.+|+|+++++ +.++.-..|-++++..+||.+..+...|+..++.
T Consensus 164 kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drl 243 (516)
T KOG0690|consen 164 KVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRL 243 (516)
T ss_pred eeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceE
Confidence 34677899999999999999999999999999999998874 3445556799999999999999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
+.||||..||.|+-.+.+. ..+++.+..-+-..|..||.||| +++||+||+|.+|.|++.||++||+|||++
T Consensus 244 CFVMeyanGGeLf~HLsre-----r~FsE~RtRFYGaEIvsAL~YLH---s~~ivYRDlKLENLlLDkDGHIKitDFGLC 315 (516)
T KOG0690|consen 244 CFVMEYANGGELFFHLSRE-----RVFSEDRTRFYGAEIVSALGYLH---SRNIVYRDLKLENLLLDKDGHIKITDFGLC 315 (516)
T ss_pred EEEEEEccCceEeeehhhh-----hcccchhhhhhhHHHHHHhhhhh---hCCeeeeechhhhheeccCCceEeeecccc
Confidence 9999999999999888752 34677777778899999999999 789999999999999999999999999998
Q ss_pred ccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 827 KIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
+.- .........++||+.|.|||++....|+.++|+|.+||++|||++|+.||...+.+ . .+...+
T Consensus 316 KE~--I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~--k---LFeLIl------- 381 (516)
T KOG0690|consen 316 KEE--IKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE--K---LFELIL------- 381 (516)
T ss_pred hhc--ccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh--H---HHHHHH-------
Confidence 732 22223345688999999999999999999999999999999999999999754211 1 111110
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRP-----PMREVVKM 949 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 949 (973)
-.+ ..++....++...++...+.+||.+|. .+.||.++
T Consensus 382 ---~ed--~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 382 ---MED--LKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred ---hhh--ccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence 000 112333444566777888899999996 56666654
No 309
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=5.1e-33 Score=305.88 Aligned_cols=254 Identities=21% Similarity=0.239 Sum_probs=198.5
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
+|++.+.||+|+||.||+|.+..+++.||+|.+... ...+.+.+|+++++.++||||+++++++..++..++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 688899999999999999999999999999988653 234567789999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|+++++|.+++... ..+++..+..++.|++.|++|+| +.+++||||||+||+++.++.++++|||.++....
T Consensus 82 ~~~g~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~ 153 (305)
T cd05609 82 YVEGGDCATLLKNI-----GALPVDMARMYFAETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLM 153 (305)
T ss_pred cCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHEEECCCCCEEEeeCCCccccCc
Confidence 99999999999653 34788889999999999999999 78999999999999999999999999998863211
Q ss_pred CCC-------------cccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHh
Q 002063 832 SPK-------------VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTH 898 (973)
Q Consensus 832 ~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~ 898 (973)
... ........++..|+|||.+.+..++.++|+|||||++||+++|..||.... ........
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~-----~~~~~~~~ 228 (305)
T cd05609 154 SLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT-----PEELFGQV 228 (305)
T ss_pred CccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHH
Confidence 100 001112357889999999988889999999999999999999999996431 11111111
Q ss_pred hcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 899 LNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
..... ..+. ........+.+++.+||+.+|++||++.++.+.++.
T Consensus 229 ~~~~~-----~~~~----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 229 ISDDI-----EWPE----GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred Hhccc-----CCCC----ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 11110 0000 011234457899999999999999996544444443
No 310
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=3e-33 Score=305.32 Aligned_cols=262 Identities=26% Similarity=0.329 Sum_probs=200.7
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
+|++.+.||+|+||.||+|.+.++++.||||++... ...+.+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 688999999999999999999988999999987642 2346788999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
++++.+..+... ...+++..+..++.|++.|++||| +.+++|||++|+||++++++.++|+|||.+......
T Consensus 82 ~~~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 82 VERTLLELLEAS-----PGGLPPDAVRSYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRAR 153 (288)
T ss_pred CCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence 988766655432 234788999999999999999999 789999999999999999999999999998866543
Q ss_pred CCcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcc----------
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNN---------- 901 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~---------- 901 (973)
.. .......++..|+|||++.+. .++.++||||+|+++|+|++|+.||..... .+...........
T Consensus 154 ~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T cd07833 154 PA-SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSD--IDQLYLIQKCLGPLPPSHQELFS 230 (288)
T ss_pred cc-ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCCHHHhhhcc
Confidence 22 122334678899999999888 788999999999999999999999965311 1111111110000
Q ss_pred -cccch--hhccccc----cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 902 -HENVL--KVLDCEV----ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 902 -~~~~~--~~~~~~~----~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
..... +..+... ..........++.+++.+||+.+|++||++++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 231 SNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred cCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 00000 0000000 000111225678999999999999999999999864
No 311
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.7e-33 Score=306.60 Aligned_cols=262 Identities=23% Similarity=0.300 Sum_probs=198.6
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
+|+..+.||.|++|.||+|++..+++.||||++... .....+.+|++++++++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 478889999999999999999988999999988642 2335688999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
++ ++|.+++... ....+++..+..++.|++.|++||| +.+++||||+|+||+++.++.++++|||++......
T Consensus 81 ~~-~~l~~~~~~~---~~~~l~~~~~~~~~~~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~ 153 (284)
T cd07860 81 LH-QDLKKFMDAS---PLSGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 153 (284)
T ss_pred cc-cCHHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 95 6898888653 2346889999999999999999999 789999999999999999999999999998755432
Q ss_pred CCcccccccCcccccccccccccCC-CCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccc--------
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYTCK-VSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE-------- 903 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~-------- 903 (973)
.. ......++..|+|||++.+.. ++.++|||||||++|||+||+.||..... ................
T Consensus 154 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07860 154 VR--TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTS 230 (284)
T ss_pred cc--ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHHhCCCChhhhhhhhH
Confidence 21 122335678999999887654 58889999999999999999999965321 1111111110000000
Q ss_pred ------cchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 904 ------NVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 904 ------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.......... ..........+.+++.+|++.||.+||++.+++++
T Consensus 231 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 231 LPDYKPSFPKWARQDF-SKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HHHHHhhcccccccCH-HHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 0000000000 00011223457889999999999999999999865
No 312
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2.9e-33 Score=299.96 Aligned_cols=249 Identities=25% Similarity=0.372 Sum_probs=202.4
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
+|++.+.||+|+||.||+|..+.++..||+|.+... ...+.+.+|++++++++||||+++++++..+...++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 478889999999999999999999999999988653 3456778999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCc-eEEecccCCccccC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE-PKIADFGVAKIAEN 831 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~-~kl~Dfgl~~~~~~ 831 (973)
+++++|.+++... ....+++..+..++.|+++|++||| +.+++|+||+|+||++++++. ++++|||.+.....
T Consensus 81 ~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~ 154 (257)
T cd08225 81 CDGGDLMKRINRQ---RGVLFSEDQILSWFVQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLND 154 (257)
T ss_pred CCCCcHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEecccccchhccC
Confidence 9999999999753 2335789999999999999999999 789999999999999998864 69999999876643
Q ss_pred CCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccc
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDC 911 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
... ......|++.|+|||+..+..++.++||||+|+++|||++|+.||... ....++........ .
T Consensus 155 ~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~-----~~~~~~~~~~~~~~------~- 220 (257)
T cd08225 155 SME--LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN-----NLHQLVLKICQGYF------A- 220 (257)
T ss_pred Ccc--cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCc-----cHHHHHHHHhcccC------C-
Confidence 321 112245788999999998888999999999999999999999999643 12222222111110 0
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 912 EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 912 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.........+.+++.+|++.+|++||++.|++++
T Consensus 221 ----~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 221 ----PISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred ----CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 0111223468899999999999999999999875
No 313
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.5e-33 Score=307.67 Aligned_cols=247 Identities=24% Similarity=0.373 Sum_probs=197.8
Q ss_pred CcccCeecccCcEEEEEEEEcCCCceEEEEEeec--cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK--GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
|.....||+|+||.||+|....++..||||++.. ....+.+.+|+.+++.++||||+++++++..++..|+||||+++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 103 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG 103 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence 3445679999999999999988899999998754 23445688999999999999999999999999999999999999
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
++|.+++.. ..+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|+|||++........
T Consensus 104 ~~L~~~~~~------~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~- 173 (292)
T cd06658 104 GALTDIVTH------TRMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP- 173 (292)
T ss_pred CcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc-
Confidence 999998753 24788899999999999999999 78999999999999999999999999999875532211
Q ss_pred ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccC
Q 002063 836 SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVAS 915 (973)
Q Consensus 836 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
......|+..|+|||+..+..++.++||||+|+++|||++|+.||..... .. ....... .......
T Consensus 174 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~--~~---~~~~~~~-------~~~~~~~- 239 (292)
T cd06658 174 -KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP--LQ---AMRRIRD-------NLPPRVK- 239 (292)
T ss_pred -cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HH---HHHHHHh-------cCCCccc-
Confidence 12234678999999999888899999999999999999999999965311 11 1111000 0001110
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 916 ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 916 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
........+.+++.+|+..||.+|||+.+++++
T Consensus 240 -~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 240 -DSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred -cccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 111233457789999999999999999999987
No 314
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2e-33 Score=307.45 Aligned_cols=247 Identities=25% Similarity=0.359 Sum_probs=197.9
Q ss_pred cccCeecccCcEEEEEEEEcCCCceEEEEEeec--cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCC
Q 002063 679 EEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK--GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNG 756 (973)
Q Consensus 679 ~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 756 (973)
+....||+|+||.||+|....+++.||+|++.. ....+.+.+|+.+++.++|||++++++++..++..|+||||++++
T Consensus 24 ~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~ 103 (297)
T cd06659 24 ENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGG 103 (297)
T ss_pred HhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCC
Confidence 344579999999999999988899999998864 234456789999999999999999999999999999999999999
Q ss_pred chHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcc
Q 002063 757 NLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVS 836 (973)
Q Consensus 757 sL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 836 (973)
+|.+++.. ..+++..+..++.|++.|++||| +.+++||||+|+||+++.++.++|+|||++........
T Consensus 104 ~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~-- 172 (297)
T cd06659 104 ALTDIVSQ------TRLNEEQIATVCESVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP-- 172 (297)
T ss_pred CHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccc--
Confidence 99987753 24788999999999999999999 78999999999999999999999999999875433211
Q ss_pred cccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccCh
Q 002063 837 DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASE 916 (973)
Q Consensus 837 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (973)
......|+..|+|||++.+..++.++||||+||++|||++|+.||..... ............. . ..
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-----~~~~~~~~~~~~~--~-------~~ 238 (297)
T cd06659 173 KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP-----VQAMKRLRDSPPP--K-------LK 238 (297)
T ss_pred cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHhccCCC--C-------cc
Confidence 12235688999999999988899999999999999999999999964311 1111111110000 0 00
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 917 SIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 917 ~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
........+.+++.+|++.+|++||++.+++++-
T Consensus 239 ~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~ 272 (297)
T cd06659 239 NAHKISPVLRDFLERMLTREPQERATAQELLDHP 272 (297)
T ss_pred ccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhCh
Confidence 1112234578899999999999999999999863
No 315
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=8e-33 Score=305.89 Aligned_cols=250 Identities=30% Similarity=0.422 Sum_probs=199.5
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
.|+..+.||+|+||+||+|++..++..||+|++... .....+.+|++++++++|||++++++++.++...++|||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 377888999999999999999988999999988642 234568889999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|++ |++.+.+... ...+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++|+|||++.....
T Consensus 106 ~~~-g~l~~~~~~~----~~~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~ 177 (317)
T cd06635 106 YCL-GSASDLLEVH----KKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP 177 (317)
T ss_pred CCC-CCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEecCCCccccCC
Confidence 996 5787777543 235789999999999999999999 78999999999999999999999999998865432
Q ss_pred CCCcccccccCcccccccccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhh
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAY---TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
. ....|+..|+|||++. ++.++.++||||+||++|||++|+.||.... ............
T Consensus 178 ~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~-----~~~~~~~~~~~~------ 240 (317)
T cd06635 178 A------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-----AMSALYHIAQNE------ 240 (317)
T ss_pred c------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHHhcc------
Confidence 2 2245788999999974 4568899999999999999999999986531 111111111100
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
............+.+++.+|++.+|.+||++.+++++......
T Consensus 241 ----~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 241 ----SPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred ----CCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence 0011112234568899999999999999999999998776544
No 316
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-34 Score=309.53 Aligned_cols=252 Identities=24% Similarity=0.322 Sum_probs=207.2
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeec--cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccC
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK--GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
-|+++..||.|+||.||+|..++++...|-|++.. +...+++.-|++||...+||+||++++.|..++..+|..|||.
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~ 112 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCG 112 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecC
Confidence 46778889999999999999998888888888754 5567788999999999999999999999999999999999999
Q ss_pred CCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCC
Q 002063 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~ 834 (973)
||-....+-.. ...+...++..+.+|++.||.||| +..|||||+|+.|||++-+|.++++|||.+.... ..
T Consensus 113 GGAVDaimlEL----~r~LtE~QIqvvc~q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~--~t 183 (1187)
T KOG0579|consen 113 GGAVDAIMLEL----GRVLTEDQIQVVCYQVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNK--ST 183 (1187)
T ss_pred CchHhHHHHHh----ccccchHHHHHHHHHHHHHHHHHh---hcchhhhhccccceEEEecCcEeeecccccccch--hH
Confidence 99988777543 346888999999999999999999 8899999999999999999999999999986432 22
Q ss_pred cccccccCccccccccccc-----ccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhc
Q 002063 835 VSDYSCFAGTHGYIAPELA-----YTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 835 ~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
......+.||+.|||||+. ...+|+.++||||||++|.||..+.+|..+. .....+-......++
T Consensus 184 ~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhel-----npMRVllKiaKSePP----- 253 (1187)
T KOG0579|consen 184 RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHEL-----NPMRVLLKIAKSEPP----- 253 (1187)
T ss_pred HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCcccc-----chHHHHHHHhhcCCC-----
Confidence 2334468899999999986 4668999999999999999999999997643 222222222222221
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
. -..+......+.+++.+|+.++|..||+++++++|-.
T Consensus 254 --T--LlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpf 291 (1187)
T KOG0579|consen 254 --T--LLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPF 291 (1187)
T ss_pred --c--ccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcc
Confidence 1 1234566677899999999999999999999988743
No 317
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=6.5e-33 Score=298.51 Aligned_cols=252 Identities=30% Similarity=0.438 Sum_probs=201.2
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
+|+..+.||+|+||.||+|....+++.||+|.+... ...+.+.+|++++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 578889999999999999999888999999998763 2456788999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
+++++|.+++... ..+++..+..++.|+++|++||| +.+++|+||+|+||++++++.+||+|||++......
T Consensus 81 ~~~~~L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~ 152 (264)
T cd06626 81 CSGGTLEELLEHG-----RILDEHVIRVYTLQLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNN 152 (264)
T ss_pred CCCCcHHHHHhhc-----CCCChHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEcccccccccCCC
Confidence 9999999998752 24678888999999999999999 789999999999999999999999999998866443
Q ss_pred CCccc--ccccCcccccccccccccCC---CCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 833 PKVSD--YSCFAGTHGYIAPELAYTCK---VSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 833 ~~~~~--~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
..... .....++..|+|||++.+.. ++.++||||||+++||+++|+.||..... .......+.. ...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~-~~~~~~~~~~--~~~----- 224 (264)
T cd06626 153 TTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDN-EFQIMFHVGA--GHK----- 224 (264)
T ss_pred CCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcc-hHHHHHHHhc--CCC-----
Confidence 22111 11245788999999988766 88999999999999999999999965321 1111111110 000
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.... ........+.+++.+|++.+|++||++.|++.+
T Consensus 225 ---~~~~--~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 225 ---PPIP--DSLQLSPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred ---CCCC--cccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000 111224557789999999999999999999764
No 318
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=5.8e-33 Score=311.83 Aligned_cols=264 Identities=25% Similarity=0.289 Sum_probs=199.4
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeC-----
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKG----- 743 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~----- 743 (973)
....+|+..+.||+|+||.||+|++..+++.||||++... .....+.+|++++++++||||+++++++...
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 4467899999999999999999999999999999987642 3345677899999999999999999988643
Q ss_pred -CeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEec
Q 002063 744 -GSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIAD 822 (973)
Q Consensus 744 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 822 (973)
...|+||||++ ++|.+++... ++...+..++.|++.||+||| +.+++||||||+||+++.++.+||+|
T Consensus 93 ~~~~~lv~e~~~-~~l~~~~~~~-------l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nil~~~~~~~kL~D 161 (353)
T cd07850 93 FQDVYLVMELMD-ANLCQVIQMD-------LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILD 161 (353)
T ss_pred cCcEEEEEeccC-CCHHHHHhhc-------CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEcc
Confidence 35799999995 5888877532 678888999999999999999 78999999999999999999999999
Q ss_pred ccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCc----------cHH
Q 002063 823 FGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGK----------DIV 892 (973)
Q Consensus 823 fgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~----------~~~ 892 (973)
||.+........ .....++..|+|||++.+..++.++||||+||++|+|++|+.||........ ...
T Consensus 162 fg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 238 (353)
T cd07850 162 FGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSD 238 (353)
T ss_pred CccceeCCCCCC---CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 999976543221 2224578899999999999999999999999999999999999964321000 000
Q ss_pred HH-------HHHhhccccc-----chhhccccc----cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 893 YW-------VSTHLNNHEN-----VLKVLDCEV----ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 893 ~~-------~~~~~~~~~~-----~~~~~~~~~----~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.+ .......... ..+...... ...........+.+++.+|++.||++||++.|++++-
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~ 312 (353)
T cd07850 239 EFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHP 312 (353)
T ss_pred HHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcCh
Confidence 00 0000000000 000000000 0000112345678999999999999999999999874
No 319
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=4.6e-33 Score=304.98 Aligned_cols=267 Identities=21% Similarity=0.203 Sum_probs=197.8
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc----cHHHHHHHHHHHHhcC-CCceeeEeEEEEeCCe-----
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIR-HRNILKLYACLLKGGS----- 745 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~----- 745 (973)
++|++.+.||+|+||+||+|.+..+++.||||+..... ....+.+|+++++.++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 36888999999999999999999889999999876432 2356788999999995 6999999999877665
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC-CCceEEeccc
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE-DYEPKIADFG 824 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~Dfg 824 (973)
.|+||||+++ +|.+++..........+++..+..++.||+.||+||| +++++||||+|+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEecCCCeEEEeecc
Confidence 8999999975 8999887643322346799999999999999999999 789999999999999998 8899999999
Q ss_pred CCccccCCCCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccc
Q 002063 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE 903 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 903 (973)
.+........ ......+++.|+|||++.+ ..++.++||||+|+++|+|++|..||..... ................
T Consensus 157 ~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~ 233 (295)
T cd07837 157 LGRAFSIPVK--SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSE-LQQLLHIFKLLGTPTE 233 (295)
T ss_pred cceecCCCcc--ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCH-HHHHHHHHHHhCCCCh
Confidence 9875533211 1223356888999998765 4578999999999999999999999964311 0000000000000000
Q ss_pred c----chhhc----cccccC----hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 904 N----VLKVL----DCEVAS----ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 904 ~----~~~~~----~~~~~~----~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
. ..... .+.... ........++.+++.+|++++|.+||++.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 234 QVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred hhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0 00000 000000 0112245668899999999999999999999875
No 320
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=4.7e-33 Score=304.48 Aligned_cols=264 Identities=25% Similarity=0.255 Sum_probs=198.8
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc----cHHHHHHHHHHHHhcCCCceeeEeEEEEeC--CeeEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIRHRNILKLYACLLKG--GSSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~l 748 (973)
.++|++.+.||+|+||.||+|+++.+++.||+|.++... ....+.+|++++++++||||+++++++..+ ...|+
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence 457899999999999999999999889999999886532 233567899999999999999999998877 88999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||++ ++|.+++... ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.++|+|||++..
T Consensus 84 v~e~~~-~~L~~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~ 155 (293)
T cd07843 84 VMEYVE-HDLKSLMETM----KQPFLQSEVKCLMLQLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGLARE 155 (293)
T ss_pred EehhcC-cCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEeecCceee
Confidence 999996 5999988753 235889999999999999999999 78999999999999999999999999999886
Q ss_pred ccCCCCcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHh---------
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTH--------- 898 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~--------- 898 (973)
...... ......++..|+|||++.+. .++.++|+||+|+++|||++|+.||...... ..........
T Consensus 156 ~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~ 232 (293)
T cd07843 156 YGSPLK--PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI-DQLNKIFKLLGTPTEKIWP 232 (293)
T ss_pred ccCCcc--ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCchHHHH
Confidence 654321 12234578899999988654 4688999999999999999999999753210 0000000000
Q ss_pred ----hccc--ccchhhccccccChhhHH-HHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 899 ----LNNH--ENVLKVLDCEVASESIKE-DMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 899 ----~~~~--~~~~~~~~~~~~~~~~~~-~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.... .................. ....+.+++.+|++.+|++||++.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 233 GFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred HhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0000 000000000000001111 25567899999999999999999999875
No 321
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=6.6e-34 Score=328.98 Aligned_cols=254 Identities=24% Similarity=0.396 Sum_probs=191.1
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeC------
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKG------ 743 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------ 743 (973)
+...+|+..+.||+||||.|||++.+-+|+.||||++.-. .....+.+|++.+.+++|||||+++..|.+.
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 4456788999999999999999999999999999998653 3455678999999999999999998433100
Q ss_pred --------------------------------------------------------------------------------
Q 002063 744 -------------------------------------------------------------------------------- 743 (973)
Q Consensus 744 -------------------------------------------------------------------------------- 743 (973)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred ---------------------------------CeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHh
Q 002063 744 ---------------------------------GSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIA 790 (973)
Q Consensus 744 ---------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~ 790 (973)
...||-||||+...+.+++++..... .....++++.+|++|++
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~----~~d~~wrLFreIlEGLa 711 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS----QRDEAWRLFREILEGLA 711 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch----hhHHHHHHHHHHHHHHH
Confidence 11278999999988888887642111 45678899999999999
Q ss_pred HhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc----------------CCCCcccccccCcccccccccccc
Q 002063 791 YLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE----------------NSPKVSDYSCFAGTHGYIAPELAY 854 (973)
Q Consensus 791 ~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~----------------~~~~~~~~~~~~gt~~y~aPE~~~ 854 (973)
|+| +.|||||||||.|||++++..|||+|||+|.... .+......+..+||.-|+|||++.
T Consensus 712 YIH---~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~ 788 (1351)
T KOG1035|consen 712 YIH---DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLS 788 (1351)
T ss_pred HHH---hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhc
Confidence 999 7899999999999999999999999999998621 112223455678999999999986
Q ss_pred cC---CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHH
Q 002063 855 TC---KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVV 931 (973)
Q Consensus 855 ~~---~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 931 (973)
+. +|+.|+||||+|||++||+. ||..... -+..+. .++. ..+... ..........=..++++
T Consensus 789 ~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsME----Ra~iL~-~LR~-g~iP~~------~~f~~~~~~~e~slI~~ 853 (1351)
T KOG1035|consen 789 DTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSME----RASILT-NLRK-GSIPEP------ADFFDPEHPEEASLIRW 853 (1351)
T ss_pred ccccccccchhhhHHHHHHHHHHhc---cCCchHH----HHHHHH-hccc-CCCCCC------cccccccchHHHHHHHH
Confidence 54 49999999999999999995 5654311 111111 1111 111111 11122223334578999
Q ss_pred hcCCCCCCCCCHHHHHH
Q 002063 932 CTTKLPNLRPPMREVVK 948 (973)
Q Consensus 932 cl~~dP~~Rpt~~evl~ 948 (973)
+++.||.+|||+.|++.
T Consensus 854 Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 854 LLSHDPSKRPTATELLN 870 (1351)
T ss_pred HhcCCCccCCCHHHHhh
Confidence 99999999999999975
No 322
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=3.3e-33 Score=299.71 Aligned_cols=247 Identities=24% Similarity=0.286 Sum_probs=202.6
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
+|++.+.||.|+||.||+|++..+++.||+|++... ...+.+.+|++++++++||||+++++++..+...++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 478889999999999999999988999999988752 345678899999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|+++++|.+++... ..+++..+..++.|+++|++||| +.+++|+||+|+||++++++.++|+|||.+.....
T Consensus 81 ~~~~~~L~~~l~~~-----~~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 152 (258)
T cd05578 81 LLLGGDLRYHLSQK-----VKFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTP 152 (258)
T ss_pred CCCCCCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEeecccccccCC
Confidence 99999999998753 35788899999999999999999 78999999999999999999999999999876543
Q ss_pred CCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccc
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDC 911 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
.. ......|+..|+|||++.+..++.++|+||+|+++|+|++|+.||...... .............
T Consensus 153 ~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~--------- 218 (258)
T cd05578 153 DT---LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT--IRDQIRAKQETAD--------- 218 (258)
T ss_pred Cc---cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc--HHHHHHHHhcccc---------
Confidence 32 122345788999999998888999999999999999999999999765321 1111111111111
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCCCCCCCH--HHHHH
Q 002063 912 EVASESIKEDMIKLLKIAVVCTTKLPNLRPPM--REVVK 948 (973)
Q Consensus 912 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~--~evl~ 948 (973)
...+......+.+++.+||+.||.+||++ +|+++
T Consensus 219 ---~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 219 ---VLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred ---ccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence 11112234678899999999999999999 76654
No 323
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=4.7e-33 Score=298.11 Aligned_cols=249 Identities=27% Similarity=0.359 Sum_probs=205.0
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
+|++.+.||+|+||.||+|++..+++.+|+|.+... .....+.+|++++++++||||+++.+++..+...++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 478889999999999999999988999999988652 3345677899999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
+++++|.+++.... .....+++..+..++.|+++|++||| +.+++||||+|+||+++.++.+|++|||++......
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~ 156 (256)
T cd08530 81 APFGDLSKAISKRK-KKRKLIPEQEIWRIFIQLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN 156 (256)
T ss_pred cCCCCHHHHHHHHH-hhcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEEecCCcEEEeeccchhhhccC
Confidence 99999999997642 23456889999999999999999999 889999999999999999999999999999766543
Q ss_pred CCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
. .....++..|+|||...+..++.++|+||+|+++||+++|+.||.... .......... .
T Consensus 157 ~----~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~-----~~~~~~~~~~-----------~ 216 (256)
T cd08530 157 M----AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARS-----MQDLRYKVQR-----------G 216 (256)
T ss_pred C----cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHhc-----------C
Confidence 1 122457889999999999889999999999999999999999996542 1111111110 0
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
............+.+++.+|++.+|++||++.+++++
T Consensus 217 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 217 KYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred CCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0011122445668999999999999999999999876
No 324
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1e-32 Score=296.00 Aligned_cols=251 Identities=27% Similarity=0.362 Sum_probs=205.8
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc----cHHHHHHHHHHHHhcCCCceeeEeEEEEeC--CeeEEEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIRHRNILKLYACLLKG--GSSFLVL 750 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~lv~ 750 (973)
+|+..+.||+|++|.||+|....+++.|++|++.... ..+.+.+|++++++++||||+++++++... ...++||
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4677889999999999999999889999999887643 367789999999999999999999999888 8899999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++++|.+++... ..+++..+..++.|+++|++||| +.+++|+||+|+||+++.++.++|+|||.+....
T Consensus 81 e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 152 (260)
T cd06606 81 EYVSGGSLSSLLKKF-----GKLPEPVIRKYTRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLG 152 (260)
T ss_pred EecCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcccccEEecc
Confidence 999999999999753 26889999999999999999999 7899999999999999999999999999988765
Q ss_pred CCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcc
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
............++..|+|||.+.+..++.++||||+|+++|++++|..||.... +......... .
T Consensus 153 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~-~--------- 218 (260)
T cd06606 153 DIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG----NPMAALYKIG-S--------- 218 (260)
T ss_pred cccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----chHHHHHhcc-c---------
Confidence 5432111233567889999999988889999999999999999999999997653 1111111111 0
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.......+......+.+++.+|++.+|++||++.+++++
T Consensus 219 ~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 219 SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 001111122235678899999999999999999999875
No 325
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=8.7e-33 Score=301.01 Aligned_cols=264 Identities=21% Similarity=0.299 Sum_probs=199.9
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
+|++.+.||.|++|+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 478899999999999999999988999999988653 23456778999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
+ ++|.+++.... ....+++..+..++.|+++|++||| +.+++||||+|+||++++++.++++|||++.......
T Consensus 81 ~-~~l~~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~ 154 (284)
T cd07836 81 D-KDLKKYMDTHG--VRGALDPNTVKSFTYQLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV 154 (284)
T ss_pred C-ccHHHHHHhcC--CCCCcCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc
Confidence 7 58988887542 2345899999999999999999999 7899999999999999999999999999987553321
Q ss_pred CcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHh----------hccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTH----------LNNH 902 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~----------~~~~ 902 (973)
. ......++..|+|||++.+. .++.++||||+||++|++++|+.||...... .......... ....
T Consensus 155 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd07836 155 N--TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNE-DQLLKIFRIMGTPTESTWPGISQL 231 (284)
T ss_pred c--ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCCCChhhHHHHhcC
Confidence 1 12234568899999988654 5688999999999999999999999754211 1111110000 0000
Q ss_pred ccchhhccc---cccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 903 ENVLKVLDC---EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 903 ~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
......... .............+.+++.+|++.||.+||++.+++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 232 PEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred chhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000000000 00000112234567899999999999999999999864
No 326
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-34 Score=329.24 Aligned_cols=272 Identities=24% Similarity=0.281 Sum_probs=210.8
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec-----cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~-----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
.++|++.++||+|+||.|..++++.+++.||+|++.+ ..+..-|..|-.+|..-+.+-|+++...|.++.+.|+|
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlV 153 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLV 153 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEE
Confidence 3578999999999999999999999999999999987 34556789999999998999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
||||+||+|-..+.+. . .++..-+.-++..|.-||.-+| +.|+|||||||+|||+|..|++||+|||.+..+
T Consensus 154 MdY~pGGDlltLlSk~----~-~~pE~~ArFY~aEiVlAldslH---~mgyVHRDiKPDNvLld~~GHikLADFGsClkm 225 (1317)
T KOG0612|consen 154 MDYMPGGDLLTLLSKF----D-RLPEDWARFYTAEIVLALDSLH---SMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKM 225 (1317)
T ss_pred EecccCchHHHHHhhc----C-CChHHHHHHHHHHHHHHHHHHH---hccceeccCCcceeEecccCcEeeccchhHHhc
Confidence 9999999999999865 2 5677777778899999999999 899999999999999999999999999999887
Q ss_pred cCCCCcccccccCcccccccccccc----c-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccccc
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAY----T-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
...+. ......+|||.|.+||+++ + +.|++.+|+||+||++|||+.|..||..+ +++......+...+
T Consensus 226 ~~dG~-V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad-----slveTY~KIm~hk~- 298 (1317)
T KOG0612|consen 226 DADGT-VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD-----SLVETYGKIMNHKE- 298 (1317)
T ss_pred CCCCc-EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH-----HHHHHHHHHhchhh-
Confidence 65433 3334578999999999985 3 57999999999999999999999999653 23332222222211
Q ss_pred chhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCC---HHHHHHHh----------hcCCCCCCCCCCCCCCCCC
Q 002063 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPP---MREVVKML----------ADADPCTDKSPDNSSDKSG 969 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt---~~evl~~L----------~~~~~~~~~~~~~~s~~~~ 969 (973)
...+. ...+.++...++|.+.+ -+|+.|.. +.++-.|. ++..++.-|+..+.+|+|.
T Consensus 299 ~l~FP-------~~~~VSeeakdLI~~ll-~~~e~RLgrngiedik~HpFF~g~~W~~iR~~~pP~vPevssd~DTsn 368 (1317)
T KOG0612|consen 299 SLSFP-------DETDVSEEAKDLIEALL-CDREVRLGRNGIEDIKNHPFFEGIDWDNIRESVPPVVPEVSSDDDTSN 368 (1317)
T ss_pred hcCCC-------cccccCHHHHHHHHHHh-cChhhhcccccHHHHHhCccccCCChhhhhhcCCCCCCcCCCCCcccc
Confidence 11111 11123344555555444 57888877 88887764 3344444455555555543
No 327
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.5e-32 Score=295.77 Aligned_cols=245 Identities=25% Similarity=0.321 Sum_probs=192.5
Q ss_pred hcCCcccCee--cccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEEEEE
Q 002063 675 ICNLEEDNLI--GSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 675 ~~~~~~~~~l--G~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e 751 (973)
.++|++.+.+ |+|+||.||+++.+.+++.+|+|.+....... .|......+ +||||+++++++..++..|+|||
T Consensus 13 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~---~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e 89 (267)
T PHA03390 13 LKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA---IEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMD 89 (267)
T ss_pred HHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch---hhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEE
Confidence 3456666666 99999999999999999999999876532111 122222222 79999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCC-ceEEecccCCcccc
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY-EPKIADFGVAKIAE 830 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfgl~~~~~ 830 (973)
|+++|+|.+++... ..+++..+..++.|+++|++|+| +.+++||||||+||+++.++ .++++|||.+....
T Consensus 90 ~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~ 161 (267)
T PHA03390 90 YIKDGDLFDLLKKE-----GKLSEAEVKKIIRQLVEALNDLH---KHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIG 161 (267)
T ss_pred cCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEeCCCCeEEEecCccceecC
Confidence 99999999999753 26889999999999999999999 78999999999999999988 99999999987554
Q ss_pred CCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcc
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
.. ....++..|+|||++.+..++.++||||+|+++|||++|+.||........+...+.... ....
T Consensus 162 ~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~------- 227 (267)
T PHA03390 162 TP------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKKL------- 227 (267)
T ss_pred CC------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cccC-------
Confidence 22 123578999999999988999999999999999999999999975433222222222211 1000
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCCCCCC-HHHHHHH
Q 002063 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPP-MREVVKM 949 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-~~evl~~ 949 (973)
.........+.+++.+|++.+|.+||+ +++++++
T Consensus 228 -----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 228 -----PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred -----CcccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence 111234556889999999999999996 6998864
No 328
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.3e-32 Score=293.82 Aligned_cols=249 Identities=29% Similarity=0.408 Sum_probs=204.4
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc--cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccC
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD--GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
+|+..+.||+|++|.||+|.+..+++.|++|++.... ..+.+.+|++++++++||+++++++++..+...++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 4778899999999999999999889999999987654 56788999999999999999999999999999999999999
Q ss_pred CCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCC
Q 002063 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~ 834 (973)
+++|.+++... ...+++..+..++.|+++|++||| ..+++||||+|+||+++.++.++|+|||.+........
T Consensus 81 ~~~L~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 153 (253)
T cd05122 81 GGSLKDLLKST----NQTLTESQIAYVCKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA 153 (253)
T ss_pred CCcHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEeecccccccccccc
Confidence 99999998753 246899999999999999999999 78999999999999999999999999999876654321
Q ss_pred cccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcccccc
Q 002063 835 VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVA 914 (973)
Q Consensus 835 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (973)
.....++..|+|||.+.+..++.++||||+|+++|+|++|+.||..... ......... .. .....
T Consensus 154 ---~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~-~~-~~~~~----- 218 (253)
T cd05122 154 ---RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPP-----MKALFKIAT-NG-PPGLR----- 218 (253)
T ss_pred ---ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCch-----HHHHHHHHh-cC-CCCcC-----
Confidence 2334678899999999888889999999999999999999999965311 111111100 00 00000
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 915 SESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 915 ~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
........+.+++.+|++.||++|||+.+++++
T Consensus 219 --~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 219 --NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred --cccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 011124568899999999999999999999875
No 329
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.1e-32 Score=300.39 Aligned_cols=257 Identities=25% Similarity=0.374 Sum_probs=207.0
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc-cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
....|+..+.||+|++|.||+|.+..+++.||+|++.... ..+.+.+|++++++++|+|++++++++..+...|+|+||
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 96 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEY 96 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEec
Confidence 4456888899999999999999999889999999987643 366788999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
+++++|.+++.... ..+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.++|+|||.+......
T Consensus 97 ~~~~~L~~~l~~~~----~~l~~~~~~~i~~~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 169 (286)
T cd06614 97 MDGGSLTDIITQNF----VRMNEPQIAYVCREVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKE 169 (286)
T ss_pred cCCCcHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCChhhEEEcCCCCEEECccchhhhhccc
Confidence 99999999998641 36889999999999999999999 789999999999999999999999999988655332
Q ss_pred CCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
.. ......++..|+|||++.+..++.++|||||||++|+|++|+.||..... ........... ...
T Consensus 170 ~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~-----~~~~~~~~~~~--~~~----- 235 (286)
T cd06614 170 KS--KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPP-----LRALFLITTKG--IPP----- 235 (286)
T ss_pred hh--hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhcC--CCC-----
Confidence 11 12234578899999999888899999999999999999999999964311 11111111000 000
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
..........+.+++.+|++.+|.+||++.+++++-.-.
T Consensus 236 --~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~ 274 (286)
T cd06614 236 --LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLK 274 (286)
T ss_pred --CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhh
Confidence 011112345688999999999999999999998754433
No 330
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.1e-32 Score=298.99 Aligned_cols=244 Identities=27% Similarity=0.327 Sum_probs=194.4
Q ss_pred ecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCCch
Q 002063 684 IGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNGNL 758 (973)
Q Consensus 684 lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL 758 (973)
||+|+||+||+|....+++.||+|.+... .....+.+|++++++++||||+++++++..++..|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 69999999999999988999999988642 2344567899999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcccc
Q 002063 759 FQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDY 838 (973)
Q Consensus 759 ~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 838 (973)
.+++... ....+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++|+|||.+...... ...
T Consensus 81 ~~~l~~~---~~~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~---~~~ 151 (277)
T cd05577 81 KYHIYNV---GEPGFPEARAIFYAAQIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG---KKI 151 (277)
T ss_pred HHHHHHc---CcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC---Ccc
Confidence 9999754 2245789999999999999999999 789999999999999999999999999998765432 112
Q ss_pred cccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhh
Q 002063 839 SCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESI 918 (973)
Q Consensus 839 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (973)
....++..|+|||++.+..++.++||||+||++|+|++|+.||...... ............. .....
T Consensus 152 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~------------~~~~~ 218 (277)
T cd05577 152 KGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEK-VEKEELKRRTLEM------------AVEYP 218 (277)
T ss_pred ccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccc-ccHHHHHhccccc------------cccCC
Confidence 2345788999999998888999999999999999999999999754221 1111110100000 00111
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 002063 919 KEDMIKLLKIAVVCTTKLPNLRP-----PMREVVKM 949 (973)
Q Consensus 919 ~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 949 (973)
......+.+++.+||+.+|++|| ++.+++++
T Consensus 219 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h 254 (277)
T cd05577 219 DKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREH 254 (277)
T ss_pred ccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhC
Confidence 22345678999999999999999 77777764
No 331
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.6e-32 Score=298.75 Aligned_cols=247 Identities=25% Similarity=0.378 Sum_probs=199.1
Q ss_pred CcccCeecccCcEEEEEEEEcCCCceEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
|...+.||+|++|.||+|....+++.||+|++... ...+.+.+|+.+++.++||||+++++++..++..++|+||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 44557899999999999999888999999987542 3345678999999999999999999999999999999999999
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
++|.+++.. ..+++..+..++.|++.|++|+| +++++||||+|+||+++.++.++++|||.+........
T Consensus 101 ~~L~~~~~~------~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~- 170 (285)
T cd06648 101 GALTDIVTH------TRMNEEQIATVCLAVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP- 170 (285)
T ss_pred CCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCc-
Confidence 999998874 24788899999999999999999 78999999999999999999999999998765433211
Q ss_pred ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccC
Q 002063 836 SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVAS 915 (973)
Q Consensus 836 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
......|+..|+|||...+..++.++||||+||++|||++|+.||.... ............. +..
T Consensus 171 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~-----~~~~~~~~~~~~~-------~~~-- 235 (285)
T cd06648 171 -RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEP-----PLQAMKRIRDNLP-------PKL-- 235 (285)
T ss_pred -ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCC-----HHHHHHHHHhcCC-------CCC--
Confidence 1223468899999999988889999999999999999999999996431 1111111111110 000
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 916 ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 916 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.........+.+++.+||+++|++||++.+++++
T Consensus 236 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 236 KNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred cccccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 0111234568899999999999999999999974
No 332
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=9.9e-33 Score=304.26 Aligned_cols=268 Identities=25% Similarity=0.270 Sum_probs=200.4
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc----cHHHHHHHHHHHHhcCCCceeeEeEEEEeC--CeeE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIRHRNILKLYACLLKG--GSSF 747 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~ 747 (973)
...+|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+|++++++++||||+++++++... +..+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 3568999999999999999999999999999999886432 123456899999999999999999998754 5689
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+||||++ ++|.+++... ...+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||.+.
T Consensus 85 lv~e~~~-~~l~~~l~~~----~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~ 156 (309)
T cd07845 85 LVMEYCE-QDLASLLDNM----PTPFSESQVKCLMLQLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKIADFGLAR 156 (309)
T ss_pred EEEecCC-CCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccceee
Confidence 9999996 5888888753 245889999999999999999999 7899999999999999999999999999998
Q ss_pred cccCCCCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccc-cc
Q 002063 828 IAENSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE-NV 905 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~ 905 (973)
....... ......++..|+|||++.+ ..++.++||||+||++|||++|+.||.... .......+........ ..
T Consensus 157 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~--~~~~~~~~~~~~~~~~~~~ 232 (309)
T cd07845 157 TYGLPAK--PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKS--EIEQLDLIIQLLGTPNESI 232 (309)
T ss_pred ecCCccC--CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHhcCCCChhh
Confidence 6654321 1222345788999999865 457899999999999999999999996431 1111111111100000 00
Q ss_pred ----------hhh--ccccc--cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 906 ----------LKV--LDCEV--ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 906 ----------~~~--~~~~~--~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
... -.... .........+.+.+++.+|+++||++|||+.+++++-.=.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~ 294 (309)
T cd07845 233 WPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFK 294 (309)
T ss_pred chhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhc
Confidence 000 00000 0000112355678899999999999999999999875543
No 333
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=9.5e-33 Score=299.30 Aligned_cols=242 Identities=24% Similarity=0.264 Sum_probs=188.8
Q ss_pred eecccCcEEEEEEEEcCCCceEEEEEeeccc-----cHHHHHHHHHHHHh---cCCCceeeEeEEEEeCCeeEEEEEccC
Q 002063 683 LIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----GVKVFAAEMEILGK---IRHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 683 ~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~---l~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
.||+|+||.||+|....+++.||+|.+.+.. ....+.+|..+++. .+||+|+.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999999889999999886521 12233445444443 479999999999999999999999999
Q ss_pred CCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCC
Q 002063 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~ 834 (973)
+|+|.+++... ..+++..+..++.|++.|++||| +.+++||||||+||+++.++.++++|||++.......
T Consensus 81 ~~~L~~~i~~~-----~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~- 151 (279)
T cd05633 81 GGDLHYHLSQH-----GVFSEKEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK- 151 (279)
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC-
Confidence 99999988753 35899999999999999999999 7899999999999999999999999999987553321
Q ss_pred cccccccCcccccccccccc-cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccc
Q 002063 835 VSDYSCFAGTHGYIAPELAY-TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 835 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
.....|+..|+|||.+. +..++.++||||+||++|||++|+.||...... ............
T Consensus 152 ---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~~~~~~~~------------ 214 (279)
T cd05633 152 ---PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK--DKHEIDRMTLTV------------ 214 (279)
T ss_pred ---ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCc--CHHHHHHHhhcC------------
Confidence 12246899999999986 456889999999999999999999999754221 111111111000
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHh
Q 002063 914 ASESIKEDMIKLLKIAVVCTTKLPNLRP-----PMREVVKML 950 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~L 950 (973)
....+.....++.+++.+|++.||.+|| +++|+++|.
T Consensus 215 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~ 256 (279)
T cd05633 215 NVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHV 256 (279)
T ss_pred CcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCc
Confidence 0111223345688899999999999999 699999873
No 334
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.3e-32 Score=299.31 Aligned_cols=258 Identities=23% Similarity=0.263 Sum_probs=194.5
Q ss_pred CcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcC-CCceeeEeEEEEeC--CeeEEEEE
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIR-HRNILKLYACLLKG--GSSFLVLE 751 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~--~~~~lv~e 751 (973)
|++.+.||+|+||.||+|+...+++.||+|++... .......+|+.+++++. |||++++++++.++ +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 56788999999999999999988999999987652 22233457888898885 99999999999887 88999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|++ |++.+++... ...+++..+..++.|++.||+||| +.+++||||+|+||+++. +.+||+|||++.....
T Consensus 81 ~~~-~~l~~~l~~~----~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~ 151 (282)
T cd07831 81 LMD-MNLYELIKGR----KRPLPEKRVKSYMYQLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADFGSCRGIYS 151 (282)
T ss_pred cCC-ccHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEeccccccccc
Confidence 996 5888887643 245899999999999999999999 789999999999999999 9999999999976643
Q ss_pred CCCcccccccCcccccccccccc-cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccccc------
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAY-TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN------ 904 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~------ 904 (973)
... .....++..|+|||++. +..++.++||||+||++|||++|+.||.... ..+..............
T Consensus 152 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 226 (282)
T cd07831 152 KPP---YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTN--ELDQIAKIHDVLGTPDAEVLKKF 226 (282)
T ss_pred CCC---cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCC--HHHHHHHHHHHcCCCCHHHHHhh
Confidence 321 12245788999999764 4557889999999999999999999996542 11111111111100000
Q ss_pred ----chhhcccccc----ChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 905 ----VLKVLDCEVA----SESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 905 ----~~~~~~~~~~----~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
......+... ..........+.+++.+|++++|++||++.+++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 227 RKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred cccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 0000000000 01112345788999999999999999999999875
No 335
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.5e-32 Score=300.70 Aligned_cols=264 Identities=21% Similarity=0.250 Sum_probs=196.7
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
++|++.+.||+|++|+||+|++..+++.||+|++... ...+.+.+|++++++++||||+++++++..+...|+|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 5788999999999999999999988999999987542 233567889999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC-CCceEEecccCCcccc
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE-DYEPKIADFGVAKIAE 830 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~Dfgl~~~~~ 830 (973)
|++ ++|.+++... .....++..+..++.|++.||+||| +++++||||+|+||+++. ++.+||+|||++....
T Consensus 82 ~~~-~~l~~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~ 154 (294)
T PLN00009 82 YLD-LDLKKHMDSS---PDFAKNPRLIKTYLYQILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFG 154 (294)
T ss_pred ccc-ccHHHHHHhC---CCCCcCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEEcccccccccC
Confidence 995 5888877543 2233577888899999999999999 789999999999999985 5679999999997554
Q ss_pred CCCCcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccc----
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV---- 905 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---- 905 (973)
... .......+++.|+|||++.+. .++.++||||+||++|+|++|+.||...... .................
T Consensus 155 ~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 231 (294)
T PLN00009 155 IPV--RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI-DELFKIFRILGTPNEETWPGV 231 (294)
T ss_pred CCc--cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCChhhcccc
Confidence 321 112234578899999988664 5789999999999999999999999653211 11111110000000000
Q ss_pred ---hhh---c---cccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 906 ---LKV---L---DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 906 ---~~~---~---~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
... . ..............++.+++.+|++.+|++||++.+++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 232 TSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred ccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 0 0000000112234568899999999999999999999875
No 336
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2e-32 Score=304.31 Aligned_cols=263 Identities=21% Similarity=0.272 Sum_probs=193.7
Q ss_pred Ceeccc--CcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 682 NLIGSG--GTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 682 ~~lG~G--~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
..||+| +||+||+|++..+++.||||+.... ...+.+.+|+.+++.++||||+++++++..++..++||||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 345666 9999999999988999999987642 2346688899999999999999999999999999999999999
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
|++.+++.... ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.++++||+.+.........
T Consensus 84 ~~l~~~l~~~~---~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~ 157 (328)
T cd08226 84 GSANSLLKTYF---PEGMSEALIGNILFGALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQK 157 (328)
T ss_pred CCHHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcc
Confidence 99999988642 234788889999999999999999 789999999999999999999999999865433211110
Q ss_pred cc-----ccccCcccccccccccccC--CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhh---------
Q 002063 836 SD-----YSCFAGTHGYIAPELAYTC--KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHL--------- 899 (973)
Q Consensus 836 ~~-----~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~--------- 899 (973)
.. .....++..|+|||++.+. .++.++||||+||++|||++|+.||...... ...........
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 236 (328)
T cd08226 158 AKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRT-QMLLQKLKGPPYSPLDITTF 236 (328)
T ss_pred ccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChH-HHHHHHhcCCCCCCcccccc
Confidence 00 0112345679999998764 4789999999999999999999999754211 00000000000
Q ss_pred --------cccccc--------------hhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 900 --------NNHENV--------------LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 900 --------~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
...... ....+..............+.+++.+||+.||++|||+.|++++-.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~ 310 (328)
T cd08226 237 PCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAF 310 (328)
T ss_pred chhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHH
Confidence 000000 0000011111223345677899999999999999999999987643
No 337
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-34 Score=300.20 Aligned_cols=246 Identities=24% Similarity=0.332 Sum_probs=202.2
Q ss_pred ccCeecccCcEEEEEEEEcCCCceEEEEEeec----cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 680 EDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 680 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
..++||.|.||+||-|+++++|+.||||++.+ .+...+.++|++|++.++||.||.+-..|+..+.+++|||.+ +
T Consensus 568 ~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~ 646 (888)
T KOG4236|consen 568 ADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-H 646 (888)
T ss_pred hHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-c
Confidence 35789999999999999999999999999976 355678899999999999999999999999999999999999 5
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCC---CceEEecccCCccccCC
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED---YEPKIADFGVAKIAENS 832 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~---~~~kl~Dfgl~~~~~~~ 832 (973)
|+..+.+-.. ....++.....-++.||+.||.||| -++|+|+|+||+|||+.+. .++||||||+|+..+..
T Consensus 647 GDMLEMILSs---EkgRL~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk 720 (888)
T KOG4236|consen 647 GDMLEMILSS---EKGRLPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK 720 (888)
T ss_pred chHHHHHHHh---hcccchHHHHHHHHHHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeeccccceeecchh
Confidence 6766666533 4556788777888999999999999 7899999999999999754 46999999999988765
Q ss_pred CCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
.. ....+||+.|.|||+++.+.|...-||||.||++|.-++|..||.+. +++. .+.++.. ..
T Consensus 721 sF---RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd----EdIn----dQIQNAa-------FM 782 (888)
T KOG4236|consen 721 SF---RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED----EDIN----DQIQNAA-------FM 782 (888)
T ss_pred hh---hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc----cchh----HHhhccc-------cc
Confidence 33 33478999999999999999999999999999999999999999754 2222 2222222 12
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
+....+.+......++|...++..-.+|-++...+.|.
T Consensus 783 yPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~ 820 (888)
T KOG4236|consen 783 YPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHP 820 (888)
T ss_pred cCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccch
Confidence 23344566666778888888888888998887766543
No 338
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=8.9e-33 Score=297.05 Aligned_cols=242 Identities=28% Similarity=0.373 Sum_probs=196.6
Q ss_pred ecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCCch
Q 002063 684 IGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNGNL 758 (973)
Q Consensus 684 lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL 758 (973)
||.|++|.||+|++..+++.||+|++.+. ...+.+.+|++++++++||||+++++++.++...|+||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 69999999999999988999999988652 2346688999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcccc
Q 002063 759 FQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDY 838 (973)
Q Consensus 759 ~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 838 (973)
.+++... ..+++..+..++.|++.|++|+| +.+++|+||+|+||+++.++.++|+|||.+....... ..
T Consensus 81 ~~~l~~~-----~~l~~~~~~~~~~~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~ 149 (262)
T cd05572 81 WTILRDR-----GLFDEYTARFYIACVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KT 149 (262)
T ss_pred HHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---cc
Confidence 9999753 24788899999999999999999 7899999999999999999999999999988664432 12
Q ss_pred cccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhh
Q 002063 839 SCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESI 918 (973)
Q Consensus 839 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (973)
....++..|+|||.+.+..++.++|+||+|+++|+|++|+.||..... +............. ....+
T Consensus 150 ~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~----------~~~~~ 216 (262)
T cd05572 150 WTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE---DPMEIYNDILKGNG----------KLEFP 216 (262)
T ss_pred ccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC---CHHHHHHHHhccCC----------CCCCC
Confidence 234678899999999888899999999999999999999999976532 11222221111000 01111
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHH
Q 002063 919 KEDMIKLLKIAVVCTTKLPNLRPP-----MREVVKM 949 (973)
Q Consensus 919 ~~~~~~l~~l~~~cl~~dP~~Rpt-----~~evl~~ 949 (973)
......+.+++.+||+.+|++||+ +.|++++
T Consensus 217 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~ 252 (262)
T cd05572 217 NYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKH 252 (262)
T ss_pred cccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcC
Confidence 122456889999999999999999 7777764
No 339
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=6.3e-33 Score=309.41 Aligned_cols=267 Identities=22% Similarity=0.317 Sum_probs=198.9
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec---cccHHHHHHHHHHHHhcCCCceeeEeEEEEeC-----CeeE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK---GDGVKVFAAEMEILGKIRHRNILKLYACLLKG-----GSSF 747 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~~~ 747 (973)
++|++.+.||+|+||.||+|++..+++.||||++.. ......+.+|++++++++||||+++++++... ...|
T Consensus 5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 84 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVY 84 (336)
T ss_pred cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEE
Confidence 578999999999999999999999999999998864 23345678899999999999999999887643 3579
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+|+||++ +++.+++.. ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.++|+|||++.
T Consensus 85 lv~e~~~-~~l~~~~~~------~~l~~~~~~~i~~ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~ 154 (336)
T cd07849 85 IVQELME-TDLYKLIKT------QHLSNDHIQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLAR 154 (336)
T ss_pred EEehhcc-cCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEECccccee
Confidence 9999996 588777753 25788999999999999999999 7899999999999999999999999999987
Q ss_pred cccCCCCc-ccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccc--c
Q 002063 828 IAENSPKV-SDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH--E 903 (973)
Q Consensus 828 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~--~ 903 (973)
........ .......|+..|+|||++.+ ..++.++||||+||++|+|++|+.||.... ............... +
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~--~~~~~~~~~~~~~~~~~~ 232 (336)
T cd07849 155 IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKD--YLHQLNLILGVLGTPSQE 232 (336)
T ss_pred eccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHcCCCCHH
Confidence 65432211 11223467899999998754 468899999999999999999999996431 111000000000000 0
Q ss_pred cchhhc-----------ccccc-C--hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH--hhcCC
Q 002063 904 NVLKVL-----------DCEVA-S--ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM--LADAD 954 (973)
Q Consensus 904 ~~~~~~-----------~~~~~-~--~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~--L~~~~ 954 (973)
....+. ..... . ........++.+++.+||+.+|++||++.|++++ ++...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 233 DLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred HHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence 000000 00000 0 0011234568899999999999999999999998 55443
No 340
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=6e-33 Score=302.07 Aligned_cols=262 Identities=23% Similarity=0.273 Sum_probs=197.9
Q ss_pred CcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc----cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
|++.+.||.|++|+||+|.++.+|+.||+|++.... ..+.+.+|++++++++|||++++++++.+++..|+||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 577889999999999999999889999999886532 2356788999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
+ ++|.+++... ....+++..+..++.|+++||+||| +++++||||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~-~~l~~~~~~~---~~~~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~ 153 (283)
T cd07835 81 D-LDLKKYMDSS---PLTGLDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV 153 (283)
T ss_pred C-cCHHHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc
Confidence 4 6899988753 2245889999999999999999999 7899999999999999999999999999987553321
Q ss_pred CcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccc----------
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH---------- 902 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~---------- 902 (973)
. ......++..|+|||++.+. .++.++||||+|+++|+|++|+.||...... ..............
T Consensus 154 ~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd07835 154 R--TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEI-DQLFRIFRTLGTPDEDVWPGVTSL 230 (283)
T ss_pred c--ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCChHHhhhhhhc
Confidence 1 12223568899999987654 5688999999999999999999999653210 00111111000000
Q ss_pred ccchhhc-c--ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 903 ENVLKVL-D--CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 903 ~~~~~~~-~--~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
......+ . ..............+.+++.+|++.||++||++.|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 231 PDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0000000 0 000001112233568899999999999999999999865
No 341
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.2e-33 Score=324.12 Aligned_cols=274 Identities=21% Similarity=0.272 Sum_probs=191.3
Q ss_pred HHHhcCCcccCeecccCcEEEEEEEEcCCCc-eEEEE------------------Eeec-cccHHHHHHHHHHHHhcCCC
Q 002063 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAG-TVAVK------------------QLWK-GDGVKVFAAEMEILGKIRHR 731 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~-~vavK------------------~~~~-~~~~~~~~~E~~~l~~l~hp 731 (973)
.....+|++.+.||+|+||+||++..+.... .+++| .... ......+.+|++++++++||
T Consensus 144 ~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hp 223 (501)
T PHA03210 144 DEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHE 223 (501)
T ss_pred hhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCC
Confidence 4456789999999999999999987653221 12222 1111 22345678999999999999
Q ss_pred ceeeEeEEEEeCCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCee
Q 002063 732 NILKLYACLLKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNIL 811 (973)
Q Consensus 732 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nil 811 (973)
||+++++++..++..|+|+|++ ++++.+++..................++.|++.||+||| +++|+||||||+|||
T Consensus 224 nIv~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH---~~gIiHrDLKP~NIL 299 (501)
T PHA03210 224 NILKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH---DKKLIHRDIKLENIF 299 (501)
T ss_pred CcCcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEE
Confidence 9999999999999999999999 567888776432222223345567789999999999999 789999999999999
Q ss_pred ecCCCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCC-CCcccCC-Cc
Q 002063 812 LDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKP-VEEEYGD-GK 889 (973)
Q Consensus 812 l~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~p-f~~~~~~-~~ 889 (973)
++.++.+||+|||+++.+...... ......||..|+|||++.+..++.++|||||||++|||++|..+ |...... ..
T Consensus 300 l~~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~ 378 (501)
T PHA03210 300 LNCDGKIVLGDFGTAMPFEKEREA-FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGK 378 (501)
T ss_pred ECCCCCEEEEeCCCceecCccccc-ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHH
Confidence 999999999999999876543221 12235689999999999999999999999999999999998754 4322111 11
Q ss_pred cHHHHHHHhhcccc-------cchhhccccc---cChhhH------HHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 890 DIVYWVSTHLNNHE-------NVLKVLDCEV---ASESIK------EDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 890 ~~~~~~~~~~~~~~-------~~~~~~~~~~---~~~~~~------~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.+...+........ .+.+.++... ...... .....+.+++.+|+++||.+||++.|++++-
T Consensus 379 ~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp 455 (501)
T PHA03210 379 QLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALP 455 (501)
T ss_pred HHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhCh
Confidence 11111111000000 0000000000 000000 1123467788999999999999999999863
No 342
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4e-33 Score=303.67 Aligned_cols=252 Identities=27% Similarity=0.336 Sum_probs=206.7
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
..+..|.+.+.||+|.|++|.+|++..++..||||.+.+. ...+.+.+|+++++.++|||||+++.+...+..+|+
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL 132 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence 4456789999999999999999999999999999998773 233457899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+.+|.+++|+..+. .........++.|+.+|++||| ++.|||||||++||+++.+..+||+|||++..
T Consensus 133 V~eya~~ge~~~yl~~~g-----r~~e~~ar~~F~q~vsaveYcH---~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~ 204 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVKHG-----RMKEKEARAKFRQIVSAVEYCH---SKNIVHRDLKAENILLDENMNIKIADFGFSTF 204 (596)
T ss_pred EEEeccCchhHHHHHhcc-----cchhhhhhhhhHHHHHHHHHHh---hcceeccccchhhcccccccceeeecccccee
Confidence 999999999999998752 2334677788999999999999 78999999999999999999999999999998
Q ss_pred ccCCCCcccccccCcccccccccccccCCCC-ccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVS-EKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
+..... ...++|++.|.|||++.+.+|. +.+|+||+|+++|.++.|..||++..-. ... .+
T Consensus 205 ~~~~~~---lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk-----~Lr----------~r 266 (596)
T KOG0586|consen 205 FDYGLM---LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLK-----ELR----------PR 266 (596)
T ss_pred eccccc---ccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccc-----ccc----------ch
Confidence 864432 3347899999999999998875 7899999999999999999999754110 000 01
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
.+-..+. .+.-...++.+++++++-.+|.+|++.+++.++-+.
T Consensus 267 vl~gk~r--Ip~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~ 309 (596)
T KOG0586|consen 267 VLRGKYR--IPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWR 309 (596)
T ss_pred heeeeec--ccceeechhHHHHHHhhccCccccCCHHHhhhhccc
Confidence 1111111 011223457788889999999999999999987654
No 343
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=2e-33 Score=277.96 Aligned_cols=258 Identities=23% Similarity=0.275 Sum_probs=204.9
Q ss_pred cCCccc-CeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhc-CCCceeeEeEEEEe----CCeeEEE
Q 002063 676 CNLEED-NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKI-RHRNILKLYACLLK----GGSSFLV 749 (973)
Q Consensus 676 ~~~~~~-~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~----~~~~~lv 749 (973)
++|.+. ++||-|-.|.|..+.++.+++.+|+|++.. .+..++|++.-=.. .|||||.++++|+. .....+|
T Consensus 61 edY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D---s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiV 137 (400)
T KOG0604|consen 61 EDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD---SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIV 137 (400)
T ss_pred hhheehhhhhccccCCceEEEEeccchhhhHHHHHhc---CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEee
Confidence 444442 678999999999999999999999998854 33456788875444 69999999999864 4567899
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC---CCceEEecccCC
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE---DYEPKIADFGVA 826 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~Dfgl~ 826 (973)
||.|+||.|++.++.+ +...+.+.++..|+.||+.|+.||| +.+|.||||||+|+|.+. +..+|++|||+|
T Consensus 138 mE~meGGeLfsriq~~---g~~afTErea~eI~~qI~~Av~~lH---~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFA 211 (400)
T KOG0604|consen 138 MECMEGGELFSRIQDR---GDQAFTEREASEIMKQIGLAVRYLH---SMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFA 211 (400)
T ss_pred eecccchHHHHHHHHc---ccccchHHHHHHHHHHHHHHHHHHH---hcchhhccCChhheeeecCCCCcceEecccccc
Confidence 9999999999999865 5667899999999999999999999 899999999999999975 557999999999
Q ss_pred ccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 827 KIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
+..... ......+-|+.|.|||++...+|+...|+||+||++|-|++|..||....+..-+... +.+....
T Consensus 212 K~t~~~---~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgM--k~rI~~g---- 282 (400)
T KOG0604|consen 212 KETQEP---GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM--KRRIRTG---- 282 (400)
T ss_pred cccCCC---ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhH--HhHhhcc----
Confidence 865432 2334456799999999999999999999999999999999999999765442222111 1111111
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
.-.+..+.+...++...++++..+..+|.+|.|+.+++++-.-.+
T Consensus 283 ---qy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~ 327 (400)
T KOG0604|consen 283 ---QYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQ 327 (400)
T ss_pred ---CccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcc
Confidence 012233456677788899999999999999999999998866543
No 344
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.7e-32 Score=306.20 Aligned_cols=265 Identities=24% Similarity=0.326 Sum_probs=198.7
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec----cccHHHHHHHHHHHHhc-CCCceeeEeEEEEeC--Ce
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK----GDGVKVFAAEMEILGKI-RHRNILKLYACLLKG--GS 745 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~----~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~--~~ 745 (973)
...++|++.+.||+|+||.||+|.+..+++.||||++.. ......+.+|+++++++ +||||+++++++... ..
T Consensus 4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~ 83 (337)
T cd07852 4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKD 83 (337)
T ss_pred hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCce
Confidence 445688999999999999999999998899999998754 23345577899999999 999999999988653 46
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccC
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
.|+||||++ ++|..++... .+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||.
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~kl~d~g~ 153 (337)
T cd07852 84 IYLVFEYME-TDLHAVIRAN------ILEDVHKRYIMYQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGL 153 (337)
T ss_pred EEEEecccc-cCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccc
Confidence 899999996 5898887642 5788888999999999999999 78999999999999999999999999999
Q ss_pred CccccCCCCc---ccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcc
Q 002063 826 AKIAENSPKV---SDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNN 901 (973)
Q Consensus 826 ~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 901 (973)
+......... .......|+..|+|||++.+ ..++.++||||+|+++|+|++|+.||...... +....+......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~--~~~~~~~~~~~~ 231 (337)
T cd07852 154 ARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTL--NQLEKIIEVIGP 231 (337)
T ss_pred hhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCC
Confidence 9866433221 12223468899999998754 45788999999999999999999999643211 100000000000
Q ss_pred c----------ccchhhcc----ccc--cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 902 H----------ENVLKVLD----CEV--ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 902 ~----------~~~~~~~~----~~~--~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
. ......++ ... ...........+.+++.+||+.||++||++.+++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 232 PSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred CCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0 00000000 000 001111235678899999999999999999999987
No 345
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.7e-32 Score=293.91 Aligned_cols=251 Identities=28% Similarity=0.381 Sum_probs=205.9
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
+|++.+.||+|+||.||+|.+..++..||+|++... ...+.+.+|+++++.++|||++++.+.+..+...++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 478889999999999999999988999999998653 4456688999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
+++++|.+++.... .....+++..+..++.+++.|++||| +.+++|+||+|+||+++.++.++|+|||.+......
T Consensus 81 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 156 (258)
T cd08215 81 ADGGDLSQKIKKQK-KEGKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSST 156 (258)
T ss_pred cCCCcHHHHHHHhh-ccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECCccceeecccC
Confidence 99999999998642 12356899999999999999999999 789999999999999999999999999998766543
Q ss_pred CCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
.. ......|++.|+|||...+..++.++||||+|+++|+|++|+.||.... ............. .
T Consensus 157 ~~--~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~~~~~~~~~~~~-------~- 221 (258)
T cd08215 157 VD--LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN-----LLELALKILKGQY-------P- 221 (258)
T ss_pred cc--eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc-----HHHHHHHHhcCCC-------C-
Confidence 21 1223467889999999988889999999999999999999999996531 1222221111110 0
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
..+......+.+++.+||..+|++||++.+++++
T Consensus 222 ---~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 222 ---PIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred ---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0111234568899999999999999999999875
No 346
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=2.7e-32 Score=293.66 Aligned_cols=249 Identities=24% Similarity=0.319 Sum_probs=197.6
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-------ccHHHHHHHHHHHHhcCCCceeeEeEEEEeC--CeeE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-------DGVKVFAAEMEILGKIRHRNILKLYACLLKG--GSSF 747 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-------~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~ 747 (973)
+|++.+.||+|+||.||+|++..++..||+|.+... .....+.+|++++++++||||+++++++.+. ...+
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (264)
T cd06653 3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLS 82 (264)
T ss_pred ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEE
Confidence 688899999999999999999999999999987431 2345688899999999999999999998764 4688
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+||||+++++|.+++... ..+++.....++.|++.|++||| +.+++|+||||+||+++.++.++|+|||+++
T Consensus 83 ~v~e~~~~~~L~~~~~~~-----~~l~~~~~~~~~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 154 (264)
T cd06653 83 IFVEYMPGGSIKDQLKAY-----GALTENVTRRYTRQILQGVSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASK 154 (264)
T ss_pred EEEEeCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcccccc
Confidence 999999999999998753 24678888999999999999999 7899999999999999999999999999997
Q ss_pred cccCCCC-cccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 828 IAENSPK-VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 828 ~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
....... ........++..|+|||++.+..++.++|||||||++||+++|+.||..... . ..+.....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~-~~~~~~~~------ 223 (264)
T cd06653 155 RIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA----M-AAIFKIAT------ 223 (264)
T ss_pred ccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH----H-HHHHHHHc------
Confidence 6533211 1112234588999999999888899999999999999999999999965311 1 11111110
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.......+....+.+.+++..|++ +|.+||++.++++|
T Consensus 224 ----~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 224 ----QPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred ----CCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 001111223344568889999999 57999999998875
No 347
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=3e-32 Score=300.83 Aligned_cols=266 Identities=23% Similarity=0.285 Sum_probs=195.7
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc----cHHHHHHHHHHHHhcCCCceeeEeEEEEeCC-----
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIRHRNILKLYACLLKGG----- 744 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----- 744 (973)
..++|++.+.||+|+||.||+|+...+++.||||++.... ....+.+|++++++++||||+++++++....
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 4568999999999999999999999999999999876422 2334568999999999999999999886543
Q ss_pred ---eeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEe
Q 002063 745 ---SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIA 821 (973)
Q Consensus 745 ---~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 821 (973)
..++||||+. ++|.+++... ...+++..+..++.|++.|++||| +++++|+||||+||+++.++.+||+
T Consensus 90 ~~~~~~lv~e~~~-~~l~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~ 161 (310)
T cd07865 90 YKGSFYLVFEFCE-HDLAGLLSNK----NVKFTLSEIKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKLA 161 (310)
T ss_pred CCceEEEEEcCCC-cCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEECCCCcEEEC
Confidence 4599999995 5888877642 235789999999999999999999 7899999999999999999999999
Q ss_pred cccCCccccCCCCc--ccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHh
Q 002063 822 DFGVAKIAENSPKV--SDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTH 898 (973)
Q Consensus 822 Dfgl~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~ 898 (973)
|||++......... .......++..|+|||++.+. .++.++||||+|+++|||++|+.||..... ......+...
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~--~~~~~~~~~~ 239 (310)
T cd07865 162 DFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTE--QHQLTLISQL 239 (310)
T ss_pred cCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHH
Confidence 99999766432211 112234578899999987654 478899999999999999999999965321 1111111111
Q ss_pred hcccc-cc------hhhcc----ccccChhhH------HHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 899 LNNHE-NV------LKVLD----CEVASESIK------EDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 899 ~~~~~-~~------~~~~~----~~~~~~~~~------~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
....+ .. ....+ +........ .....+.+++.+|++.||++||+++|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 240 CGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred hCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 00000 00 00000 000000000 012456789999999999999999999875
No 348
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-35 Score=284.52 Aligned_cols=255 Identities=25% Similarity=0.342 Sum_probs=198.0
Q ss_pred cccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEEEEEccC
Q 002063 679 EEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 679 ~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
+-...||.|+||+|+|-.++..|+..|||++... .+.+++..|.+...+- +.||||+++|....++..|+.||.|
T Consensus 67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM- 145 (361)
T KOG1006|consen 67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM- 145 (361)
T ss_pred HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH-
Confidence 4456799999999999999999999999999873 4566778888876554 7999999999999999999999999
Q ss_pred CCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCC
Q 002063 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~ 834 (973)
..|+..+-..-..-....+++.-.-+|+.-...||.||-+ ...|||||+||+|||++..|.+|+||||.+......
T Consensus 146 d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S-- 221 (361)
T KOG1006|consen 146 DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS-- 221 (361)
T ss_pred hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHHHH--
Confidence 5677665544333345568888888888888999999987 578999999999999999999999999998766433
Q ss_pred cccccccCcccccccccccc--cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 835 VSDYSCFAGTHGYIAPELAY--TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 835 ~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
...+.-.|-..|||||.+. ++.|+-++||||||++|||+.||..||..... ....+.......++. +..
T Consensus 222 -iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s----vfeql~~Vv~gdpp~---l~~- 292 (361)
T KOG1006|consen 222 -IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS----VFEQLCQVVIGDPPI---LLF- 292 (361)
T ss_pred -HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH----HHHHHHHHHcCCCCe---ecC-
Confidence 2333456788899999885 44689999999999999999999999976422 222222222222211 111
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.....+....+..++..|+.+|-..||...++.++
T Consensus 293 --~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 293 --DKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred --cccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 11123456678999999999999999999998754
No 349
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=2.9e-32 Score=297.81 Aligned_cols=258 Identities=21% Similarity=0.210 Sum_probs=185.9
Q ss_pred cCCcccCeecccCcEEEEEEEEcCC---CceEEEEEeeccccH-------------HHHHHHHHHHHhcCCCceeeEeEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKN---AGTVAVKQLWKGDGV-------------KVFAAEMEILGKIRHRNILKLYAC 739 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~---~~~vavK~~~~~~~~-------------~~~~~E~~~l~~l~hpniv~l~~~ 739 (973)
.+|++.+.||+|+||+||+|++..+ +..+|+|+....... .....+...+..++|+++++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 5799999999999999999999876 567777754322110 011223344556789999999997
Q ss_pred EEeCC----eeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCC
Q 002063 740 LLKGG----SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED 815 (973)
Q Consensus 740 ~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~ 815 (973)
+.... ..++++|++. .++.+.+... ...++..+..++.|++.|++|+| +.+++||||||+||+++.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~iiHrDiKp~Nill~~~ 162 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLV-ENTKEIFKRI-----KCKNKKLIKNIMKDMLTTLEYIH---EHGISHGDIKPENIMVDGN 162 (294)
T ss_pred eeEecCCceEEEEEEehhc-cCHHHHHHhh-----ccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCC
Confidence 65543 4478888874 4666666532 12467778899999999999999 7899999999999999999
Q ss_pred CceEEecccCCccccCCCCc-----ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCcc
Q 002063 816 YEPKIADFGVAKIAENSPKV-----SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKD 890 (973)
Q Consensus 816 ~~~kl~Dfgl~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~ 890 (973)
+.++|+|||+++........ .......||+.|+|||+..+..++.++||||+||++|||++|+.||.........
T Consensus 163 ~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~ 242 (294)
T PHA02882 163 NRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNL 242 (294)
T ss_pred CcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHH
Confidence 99999999999866432211 1112246899999999999999999999999999999999999999765222211
Q ss_pred HHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 891 IVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.......... ++..... ......+.+.+++..|++.+|++||++.++.+.++
T Consensus 243 ~~~~~~~~~~------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 243 IHAAKCDFIK------RLHEGKI---KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HHHhHHHHHH------Hhhhhhh---ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 1111111100 0000100 01122456889999999999999999999998763
No 350
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=2.4e-32 Score=297.98 Aligned_cols=245 Identities=25% Similarity=0.378 Sum_probs=196.3
Q ss_pred ccCeecccCcEEEEEEEEcCCCceEEEEEeec--cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCCc
Q 002063 680 EDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK--GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNGN 757 (973)
Q Consensus 680 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gs 757 (973)
...+||+|+||.||+|....+++.||||++.. ......+.+|+.+++.++|||++++++++..++..++||||+++++
T Consensus 24 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 103 (292)
T cd06657 24 NFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 103 (292)
T ss_pred hHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCc
Confidence 34679999999999999998899999998754 2344568889999999999999999999999999999999999999
Q ss_pred hHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCccc
Q 002063 758 LFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSD 837 (973)
Q Consensus 758 L~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~ 837 (973)
|.+++... .+++..+..++.|++.|++|+| +.+++||||+|+||+++.++.++++|||.+....... ..
T Consensus 104 L~~~~~~~------~~~~~~~~~~~~ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~--~~ 172 (292)
T cd06657 104 LTDIVTHT------RMNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PR 172 (292)
T ss_pred HHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEcccccceeccccc--cc
Confidence 99887532 4688899999999999999999 7899999999999999999999999999887553322 12
Q ss_pred ccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChh
Q 002063 838 YSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASES 917 (973)
Q Consensus 838 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (973)
.....|+..|+|||.+.+..++.++|+||+|+++|+|++|+.||.... ............ + ... ..
T Consensus 173 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~--~~~~~~~~~~~~---~-------~~~--~~ 238 (292)
T cd06657 173 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--PLKAMKMIRDNL---P-------PKL--KN 238 (292)
T ss_pred ccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHhhC---C-------ccc--CC
Confidence 233467899999999988888999999999999999999999996431 111111111110 0 000 01
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 918 IKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 918 ~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.......+.+++.+||+.+|.+||++.+++++
T Consensus 239 ~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 239 LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred cccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 11223457788999999999999999999985
No 351
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=3.5e-32 Score=299.06 Aligned_cols=267 Identities=25% Similarity=0.273 Sum_probs=199.2
Q ss_pred HHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCC---
Q 002063 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGG--- 744 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--- 744 (973)
....++|++.+.||+|+||.||+|.++.+++.||||++... .....+.+|++++++++||||+++++++.+..
T Consensus 3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~ 82 (302)
T cd07864 3 KRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDAL 82 (302)
T ss_pred hhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhh
Confidence 45667899999999999999999999988999999988652 23345678999999999999999999887654
Q ss_pred -------eeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCc
Q 002063 745 -------SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE 817 (973)
Q Consensus 745 -------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 817 (973)
..++|+||+++ ++.+++... ...+++..+..++.|++.||+||| +.+++||||+|+||++++++.
T Consensus 83 ~~~~~~~~~~lv~e~~~~-~l~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~ 154 (302)
T cd07864 83 DFKKDKGAFYLVFEYMDH-DLMGLLESG----LVHFSEDHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQ 154 (302)
T ss_pred hccccCCcEEEEEcccCc-cHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCc
Confidence 78999999975 777776542 335889999999999999999999 789999999999999999999
Q ss_pred eEEecccCCccccCCCCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHH
Q 002063 818 PKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVS 896 (973)
Q Consensus 818 ~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~ 896 (973)
+||+|||.+........ .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||.... .......+.
T Consensus 155 ~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~--~~~~~~~~~ 231 (302)
T cd07864 155 IKLADFGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQ--ELAQLELIS 231 (302)
T ss_pred EEeCcccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHH
Confidence 99999999876643322 11222345778999998764 357889999999999999999999997431 111111111
Q ss_pred Hhhccccc--chhh--------ccccc-----cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 897 THLNNHEN--VLKV--------LDCEV-----ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 897 ~~~~~~~~--~~~~--------~~~~~-----~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
........ ...+ .+... ...........+.+++..||+.+|.+||++.+++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 232 RLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred HHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11100000 0000 00000 000011224568899999999999999999999865
No 352
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=4e-32 Score=295.65 Aligned_cols=260 Identities=24% Similarity=0.319 Sum_probs=200.8
Q ss_pred CcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc----cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
|++.+.||+|++|.||+|+...+++.+|+|++.... ....+.+|++++++++||||+++++++..++..++||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 567789999999999999999889999999876532 3456788999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++ ++.+++... ...+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~-~l~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~ 152 (283)
T cd05118 81 DT-DLYKLIKDR----QRGLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV 152 (283)
T ss_pred CC-CHHHHHHhh----cccCCHHHHHHHHHHHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc
Confidence 64 888888653 246889999999999999999999 7899999999999999999999999999987665433
Q ss_pred CcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccc-cc----ch-
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH-EN----VL- 906 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~----~~- 906 (973)
.......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||..... .+....+....... +. ..
T Consensus 153 --~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd05118 153 --RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSE--IDQLFKIFRTLGTPDPEVWPKFTS 228 (283)
T ss_pred --ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHcCCCchHhcccchh
Confidence 122234578899999998776 788999999999999999999999964321 11111110000000 00 00
Q ss_pred -------hhcccc--ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 907 -------KVLDCE--VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 907 -------~~~~~~--~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
...+.. ...........++.+++.+||++||.+||++.+++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 229 LARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 000000 0011223456788999999999999999999999875
No 353
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=5.6e-32 Score=298.42 Aligned_cols=243 Identities=30% Similarity=0.425 Sum_probs=193.4
Q ss_pred CcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
|...+.||+|+||+||+|++..+++.||+|++... ...+.+.+|++++++++|||++++++++.++...|+||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 56667899999999999999988999999988642 2335678899999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
+. |++.+++... ...+++..+..++.|++.|++||| +.+++||||+|+||+++.++.++|+|||++.....
T Consensus 103 ~~-~~l~~~l~~~----~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~- 173 (313)
T cd06633 103 CL-GSASDLLEVH----KKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP- 173 (313)
T ss_pred CC-CCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEeecCCCcccCC-
Confidence 95 6788877643 235789999999999999999999 78999999999999999999999999998864321
Q ss_pred CCcccccccCcccccccccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhc
Q 002063 833 PKVSDYSCFAGTHGYIAPELAY---TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
.....|+..|+|||++. +..++.++|||||||++|||++|+.||.... . ............
T Consensus 174 -----~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~--~---~~~~~~~~~~~~------ 237 (313)
T cd06633 174 -----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--A---MSALYHIAQNDS------ 237 (313)
T ss_pred -----CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--h---HHHHHHHHhcCC------
Confidence 12346788999999974 4568889999999999999999999986541 1 111111111000
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
+ ..........+.+++.+|++++|.+||++.+++++
T Consensus 238 -~---~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 238 -P---TLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred -C---CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 00111223457889999999999999999999976
No 354
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=3.3e-32 Score=299.67 Aligned_cols=249 Identities=29% Similarity=0.418 Sum_probs=197.7
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
.|+..+.||+|+||.||+|+...+++.||+|.+... ....++.+|+++++.++|||++++.+++..+...++|||
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 467788999999999999999988999999987541 234567789999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|+. |++.+++... ...+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++++|||++.....
T Consensus 96 ~~~-~~l~~~~~~~----~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 167 (308)
T cd06634 96 YCL-GSASDLLEVH----KKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 167 (308)
T ss_pred ccC-CCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEEECCcccceeecC
Confidence 996 6887777543 234788899999999999999999 78999999999999999999999999999875533
Q ss_pred CCCcccccccCcccccccccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhh
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAY---TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
. ....++..|+|||++. ...++.++|||||||++|+|++|+.||..... ..... ... ...
T Consensus 168 ~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~---~~~-~~~----- 230 (308)
T cd06634 168 A------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--MSALY---HIA-QNE----- 230 (308)
T ss_pred c------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccH--HHHHH---HHh-hcC-----
Confidence 2 1245788999999874 35678899999999999999999999865311 11111 000 000
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
............+.+++.+||+.+|++||++.+++++.....
T Consensus 231 ----~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~ 272 (308)
T cd06634 231 ----SPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 272 (308)
T ss_pred ----CCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccc
Confidence 000111233456789999999999999999999998866554
No 355
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=6.5e-32 Score=294.62 Aligned_cols=261 Identities=28% Similarity=0.326 Sum_probs=198.0
Q ss_pred CcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeC--CeeEEEEE
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKG--GSSFLVLE 751 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~lv~e 751 (973)
|++.+.||+|+||.||+|+...+++.||+|++... .....+.+|++++++++|||++++++++... +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 57788999999999999999988999999998764 2345678899999999999999999999887 88999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|++ ++|.+++... ...+++..+..++.|+++|++||| +.+++|+||+|+||++++++.++++|||.+.....
T Consensus 81 ~~~-~~l~~~~~~~----~~~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~ 152 (287)
T cd07840 81 YMD-HDLTGLLDSP----EVKFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYTK 152 (287)
T ss_pred ccc-ccHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEccccceeeccC
Confidence 996 4888887642 246889999999999999999999 78999999999999999999999999999986654
Q ss_pred CCCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccc-----cc
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE-----NV 905 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~-----~~ 905 (973)
... .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||..... ......+........ ..
T Consensus 153 ~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07840 153 RNS-ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTE--LEQLEKIFELCGSPTDENWPGV 229 (287)
T ss_pred CCc-ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCchhhcccc
Confidence 321 12223456788999998765 4578999999999999999999999975421 111111110000000 00
Q ss_pred hh-----hccccc-----cChhhHH-HHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 906 LK-----VLDCEV-----ASESIKE-DMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 906 ~~-----~~~~~~-----~~~~~~~-~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.. ...... ....... +...+.+++.+|++.+|++||++.+++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 230 SKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred ccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00 000000 0000111 25678899999999999999999999875
No 356
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-32 Score=251.82 Aligned_cols=262 Identities=23% Similarity=0.307 Sum_probs=197.7
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
+|...++||+|.||+||+|+..++++.||+|++.-+ .......+|+-+++.++|.|||+++++...+...-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 466678899999999999999999999999988642 2345678999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
| ..+|..|.... ...++.+.+..++.|+++|+.|+| ++++.|||+||.|.++..+|+.|++|||+++-++-+
T Consensus 83 c-dqdlkkyfdsl----ng~~d~~~~rsfmlqllrgl~fch---shnvlhrdlkpqnllin~ngelkladfglarafgip 154 (292)
T KOG0662|consen 83 C-DQDLKKYFDSL----NGDLDPEIVRSFMLQLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP 154 (292)
T ss_pred h-hHHHHHHHHhc----CCcCCHHHHHHHHHHHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEecccchhhhcCCc
Confidence 9 45888887653 456888889999999999999999 889999999999999999999999999999876543
Q ss_pred CCcccccccCcccccccccccccCC-CCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHH---hhccc-ccch
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYTCK-VSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVST---HLNNH-ENVL 906 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~---~~~~~-~~~~ 906 (973)
...++..+-|..|++|.++++.+ |++..|+||-||++.|+.. |++.|.+.+.+++ +...+.. ..... +.+.
T Consensus 155 --vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddq-lkrif~~lg~p~ed~wps~t 231 (292)
T KOG0662|consen 155 --VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ-LKRIFRLLGTPTEDQWPSMT 231 (292)
T ss_pred --eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHH-HHHHHHHhCCCccccCCccc
Confidence 23445567799999999998775 7889999999999999987 6666654422221 1111110 00111 1111
Q ss_pred hhccccccCh-----hhHHHHHHH----HHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 907 KVLDCEVASE-----SIKEDMIKL----LKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 907 ~~~~~~~~~~-----~~~~~~~~l----~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
+..|-...+. ...+..+++ .+++.+.+.-+|..|.++++.+++
T Consensus 232 ~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 232 KLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred cCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 2222111111 122222222 556667777899999999988875
No 357
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=6e-32 Score=289.13 Aligned_cols=247 Identities=31% Similarity=0.440 Sum_probs=202.9
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
+|++.+.||+|++|.||+|+...+++.||+|.+... ...+.+.+|++++++++|||++++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 478889999999999999999988999999988764 3456788999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
+++++|.+++... ..+++..+..++.|++.|+.|+| +.+++||||+|+||+++.++.++|+|||.+......
T Consensus 81 ~~~~~L~~~~~~~-----~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 152 (254)
T cd06627 81 AENGSLRQIIKKF-----GPFPESLVAVYVYQVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDV 152 (254)
T ss_pred CCCCcHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEEeccccceecCCC
Confidence 9999999998753 45789999999999999999999 789999999999999999999999999999876543
Q ss_pred CCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
... .....++..|+|||...+..++.++||||+|+++|+|++|+.||.... ..............
T Consensus 153 ~~~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~----~~~~~~~~~~~~~~--------- 217 (254)
T cd06627 153 SKD--DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLN----PMAALFRIVQDDHP--------- 217 (254)
T ss_pred ccc--ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCcc----HHHHHHHHhccCCC---------
Confidence 221 223457889999999988888899999999999999999999997532 11111111101000
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.........+.+++.+|++.+|++||++.+++.+
T Consensus 218 ---~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 218 ---PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred ---CCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence 0111224567899999999999999999999854
No 358
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=2.5e-32 Score=304.28 Aligned_cols=266 Identities=24% Similarity=0.309 Sum_probs=199.7
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEe----CCeeE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLK----GGSSF 747 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~----~~~~~ 747 (973)
.+|++.+.||+|+||.||+|....+++.||+|++... .....+.+|+.++++++||||+++++++.. ....|
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 5788999999999999999999999999999988653 334567789999999999999999988753 35689
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+||||+. |+|.+++... ..+++..+..++.|++.||+||| +++++||||||+||+++.++.+||+|||++.
T Consensus 85 lv~e~~~-~~l~~~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~ 155 (334)
T cd07855 85 VVMDLME-SDLHHIIHSD-----QPLTEEHIRYFLYQLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGMAR 155 (334)
T ss_pred EEEehhh-hhHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEecccccce
Confidence 9999995 6888887532 34889999999999999999999 7899999999999999999999999999987
Q ss_pred cccCCCCc--ccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccc--
Q 002063 828 IAENSPKV--SDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH-- 902 (973)
Q Consensus 828 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~-- 902 (973)
........ .......|+..|+|||++.+ ..++.++||||+||++|||++|+.||..... ......+.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~--~~~~~~~~~~~g~~~~ 233 (334)
T cd07855 156 GLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNY--VHQLKLILSVLGSPSE 233 (334)
T ss_pred eecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCCh--HHHHHHHHHHhCCChh
Confidence 65432211 11123468889999998765 4588999999999999999999999965421 11011100000000
Q ss_pred --------ccchhhcc---cc--cc-ChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 903 --------ENVLKVLD---CE--VA-SESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 903 --------~~~~~~~~---~~--~~-~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
....+..+ .. .. .........++.+++.+|++.+|++||++.+++++-.-
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~ 297 (334)
T cd07855 234 EVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFL 297 (334)
T ss_pred HhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhh
Confidence 00000000 00 00 00112235678999999999999999999999986554
No 359
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=2.6e-32 Score=304.41 Aligned_cols=266 Identities=21% Similarity=0.282 Sum_probs=199.9
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec----cccHHHHHHHHHHHHhcCCCceeeEeEEEEeC-----Cee
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK----GDGVKVFAAEMEILGKIRHRNILKLYACLLKG-----GSS 746 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~~ 746 (973)
.+|.+.+.||+|+||+||+|++..+++.||||++.. ......+.+|+.+++.++||||+++++++... ...
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 84 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV 84 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence 478899999999999999999999999999998764 22345677899999999999999999987643 357
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
|+||||+. ++|.+++... ..+++..+..++.|++.||+||| +++++||||||+||+++.++.+||+|||++
T Consensus 85 ~lv~e~~~-~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 155 (337)
T cd07858 85 YIVYELMD-TDLHQIIRSS-----QTLSDDHCQYFLYQLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFGLA 155 (337)
T ss_pred EEEEeCCC-CCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcCccc
Confidence 99999995 7888888642 35889999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccc---
Q 002063 827 KIAENSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH--- 902 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~--- 902 (973)
....... .......++..|+|||.+.. ..++.++|||||||++|+|++|+.||..... ..............
T Consensus 156 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~ 231 (337)
T cd07858 156 RTTSEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDY--VHQLKLITELLGSPSEE 231 (337)
T ss_pred cccCCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCCh--HHHHHHHHHHhCCCChH
Confidence 8664332 11223457889999998764 4688999999999999999999999965421 10000000000000
Q ss_pred -------ccchhhcc---ccc---cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH--hhcCC
Q 002063 903 -------ENVLKVLD---CEV---ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM--LADAD 954 (973)
Q Consensus 903 -------~~~~~~~~---~~~---~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~--L~~~~ 954 (973)
....+... ... ..........++.+++.+|++.+|++||++.+++++ +..+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~ 298 (337)
T cd07858 232 DLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH 298 (337)
T ss_pred HhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence 00000000 000 000112345678899999999999999999999998 55543
No 360
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.7e-31 Score=291.30 Aligned_cols=261 Identities=25% Similarity=0.249 Sum_probs=196.7
Q ss_pred CcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhc---CCCceeeEeEEEEeCCe-----
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKI---RHRNILKLYACLLKGGS----- 745 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l---~hpniv~l~~~~~~~~~----- 745 (973)
|++.+.||+|+||.||+|+++.+++.||+|++... .....+.+|+.+++++ +|||++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 56788999999999999999988999999998642 1234466788877666 59999999999988766
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccC
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
.+++|||++ ++|.+++... ....+++..+..++.|+++||+||| +.+++|+||+|+||+++.++.++|+|||.
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~---~~~~l~~~~~~~~~~~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l~dfg~ 153 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKC---PKPGLPPETIKDLMRQLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFGL 153 (287)
T ss_pred eEEEehhcc-cCHHHHHHHc---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEEeccCc
Confidence 899999996 5898888753 2235889999999999999999999 78999999999999999999999999999
Q ss_pred CccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccc-c
Q 002063 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE-N 904 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~ 904 (973)
+........ .....++..|+|||++.+..++.++||||+||++|||++|+.||..... ................ .
T Consensus 154 ~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07838 154 ARIYSFEMA---LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE-ADQLDKIFDVIGLPSEEE 229 (287)
T ss_pred ceeccCCcc---cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh-HHHHHHHHHHcCCCChHh
Confidence 876643322 1223478899999999988999999999999999999999999875321 1111111111000000 0
Q ss_pred -c------hhhccc---cccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 905 -V------LKVLDC---EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 905 -~------~~~~~~---~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
. ...... ........+....+.+++.+||+.||.+||++.+++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 230 WPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred cCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 0 000000 00011123445677899999999999999999999865
No 361
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=7.4e-32 Score=298.21 Aligned_cols=257 Identities=19% Similarity=0.215 Sum_probs=189.9
Q ss_pred CcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCCchHHHHH
Q 002063 688 GTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNGNLFQALH 763 (973)
Q Consensus 688 ~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~ 763 (973)
++|.||.++...+++.||||++... ...+.+.+|++++++++||||+++++++..++..+++|||+++|+|.+++.
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~ 91 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLK 91 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHH
Confidence 4566666666667999999998653 345678999999999999999999999999999999999999999999998
Q ss_pred hhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc-----ccc
Q 002063 764 KRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV-----SDY 838 (973)
Q Consensus 764 ~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~-----~~~ 838 (973)
.. ....+++.....++.|+++||+||| +.+|+||||||+||+++.++.++++|||.+......... ...
T Consensus 92 ~~---~~~~~~~~~~~~~~~~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~ 165 (314)
T cd08216 92 TH---FPEGLPELAIAFILKDVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFP 165 (314)
T ss_pred Hh---cccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccceeecccccccccccccc
Confidence 64 1234788888999999999999999 789999999999999999999999999988755322110 111
Q ss_pred cccCcccccccccccccC--CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcc---ccc-------ch
Q 002063 839 SCFAGTHGYIAPELAYTC--KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNN---HEN-------VL 906 (973)
Q Consensus 839 ~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~-------~~ 906 (973)
....++..|+|||++.+. .++.++||||+||++|||++|+.||...... ............. ... ..
T Consensus 166 ~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
T cd08216 166 KSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPAT-QMLLEKVRGTVPCLLDKSTYPLYEDSMS 244 (314)
T ss_pred ccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhccCccccccCchhhhcCCcC
Confidence 223567789999998653 5788999999999999999999999753211 1111111100000 000 00
Q ss_pred h----hcc----ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 907 K----VLD----CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 907 ~----~~~----~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
. ..+ .............++.+++.+||++||++||++.+++++-.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~ 297 (314)
T cd08216 245 QSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSF 297 (314)
T ss_pred cccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCch
Confidence 0 000 00111112334567889999999999999999999998654
No 362
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.98 E-value=4.9e-32 Score=296.74 Aligned_cols=255 Identities=27% Similarity=0.385 Sum_probs=195.8
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv 749 (973)
..++|++.+.||+|+||+||+|++..+++.||||.+... .....+.+|+.++.+. .||||+++++++.++...|+|
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 92 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC 92 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence 346788999999999999999999988999999998653 2334566677767666 499999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||++ +++.++.... ...+++..+..++.|++.|++|||+ ..+++||||+|+||+++.++.++|+|||.+...
T Consensus 93 ~e~~~-~~l~~l~~~~----~~~l~~~~~~~i~~~i~~~l~~lH~--~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~ 165 (296)
T cd06618 93 MELMS-TCLDKLLKRI----QGPIPEDILGKMTVAIVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRL 165 (296)
T ss_pred eeccC-cCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh--hCCEecCCCcHHHEEEcCCCCEEECccccchhc
Confidence 99984 5777766542 2367889999999999999999994 258999999999999999999999999998765
Q ss_pred cCCCCcccccccCcccccccccccccCC----CCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccc
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYTCK----VSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
..... .....++..|+|||++.+.. ++.++||||||+++|||++|+.||.....+ .............
T Consensus 166 ~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~~~- 237 (296)
T cd06618 166 VDSKA---KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE----FEVLTKILQEEPP- 237 (296)
T ss_pred cCCCc---ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH----HHHHHHHhcCCCC-
Confidence 43221 12235778999999987554 788999999999999999999999642111 1111111111100
Q ss_pred hhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
... .......++.+++.+|++.||++||++.+++++..
T Consensus 238 ------~~~--~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~ 275 (296)
T cd06618 238 ------SLP--PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPF 275 (296)
T ss_pred ------CCC--CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChh
Confidence 000 00123456889999999999999999999988754
No 363
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.98 E-value=5.6e-32 Score=294.45 Aligned_cols=260 Identities=25% Similarity=0.336 Sum_probs=197.1
Q ss_pred CcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc---cHHHHHHHHHHHHhcC-CCceeeEeEEEEeCCeeEEEEEcc
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD---GVKVFAAEMEILGKIR-HRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
|++.+.||+|++|+||+|+...+++.||||++.... ......+|+..+++++ |||++++++++..++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567889999999999999999889999999876532 2234567999999998 999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
+|+|.+++... ....+++..+..++.|++.|++||| +.+++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 -~~~l~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (283)
T cd07830 81 -EGNLYQLMKDR---KGKPFSESVIRSIIYQILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP 153 (283)
T ss_pred -CCCHHHHHHhc---ccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeecccceeccCCC
Confidence 88999988754 1346799999999999999999999 7899999999999999999999999999987654322
Q ss_pred CcccccccCcccccccccccc-cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcc-----------
Q 002063 834 KVSDYSCFAGTHGYIAPELAY-TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNN----------- 901 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~----------- 901 (973)
. .....++..|+|||++. +..++.++|+||||+++|||++|+.||..... .+..+........
T Consensus 154 ~---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd07830 154 P---YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSE--IDQLYKICSVLGTPTKQDWPEGYK 228 (283)
T ss_pred C---cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCCh--HHHHHHHHHhcCCCChhhhhhHhh
Confidence 1 22345788999999875 44578999999999999999999999965421 1111110000000
Q ss_pred -cccchhhccccc---cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 902 -HENVLKVLDCEV---ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 902 -~~~~~~~~~~~~---~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
............ ...........+.+++.+||+.+|++||++.|++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 229 LASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred hhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 000000000000 000111124568899999999999999999999875
No 364
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.98 E-value=7.5e-32 Score=292.24 Aligned_cols=242 Identities=24% Similarity=0.263 Sum_probs=188.1
Q ss_pred eecccCcEEEEEEEEcCCCceEEEEEeeccc-----cHHHHHHHHH---HHHhcCCCceeeEeEEEEeCCeeEEEEEccC
Q 002063 683 LIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----GVKVFAAEME---ILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 683 ~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-----~~~~~~~E~~---~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
.||+|+||.||+|+...+++.||+|.+.+.. ....+..|.. .++...||+|+++++++..++..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4799999999999999889999999876521 1122334443 3444579999999999999999999999999
Q ss_pred CCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCC
Q 002063 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~ 834 (973)
+|+|.+++... ..+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|+|||++.......
T Consensus 81 g~~L~~~l~~~-----~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~- 151 (278)
T cd05606 81 GGDLHYHLSQH-----GVFSEAEMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK- 151 (278)
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC-
Confidence 99999888642 35899999999999999999999 7899999999999999999999999999987553221
Q ss_pred cccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccc
Q 002063 835 VSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 835 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
.....|+..|+|||++.++ .++.++||||+||++|||++|+.||...... ............ ...
T Consensus 152 ---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~--------~~~- 217 (278)
T cd05606 152 ---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK--DKHEIDRMTLTM--------AVE- 217 (278)
T ss_pred ---CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCcc--chHHHHHHhhcc--------CCC-
Confidence 1234689999999998754 6889999999999999999999999764221 111111111000 011
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHh
Q 002063 914 ASESIKEDMIKLLKIAVVCTTKLPNLRP-----PMREVVKML 950 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~L 950 (973)
.+......+.+++.+|+..+|.+|| ++.+++++-
T Consensus 218 ---~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~ 256 (278)
T cd05606 218 ---LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHP 256 (278)
T ss_pred ---CCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCc
Confidence 1112345688999999999999999 999998764
No 365
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.98 E-value=2.9e-32 Score=293.55 Aligned_cols=245 Identities=27% Similarity=0.352 Sum_probs=195.1
Q ss_pred ecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCCch
Q 002063 684 IGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNGNL 758 (973)
Q Consensus 684 lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL 758 (973)
||+|+||.||+|++..+++.||+|++... ...+.+.+|++++++++||||+++++.+..+...|+||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 68999999999999988999999988653 2445688899999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCC----
Q 002063 759 FQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK---- 834 (973)
Q Consensus 759 ~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~---- 834 (973)
.+++.+. ..+++..+..++.|+++||+||| +.+++||||+|+||++++++.++|+|||++........
T Consensus 81 ~~~l~~~-----~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 152 (265)
T cd05579 81 ASLLENV-----GSLDEDVARIYIAEIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLN 152 (265)
T ss_pred HHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccc
Confidence 9999753 25789999999999999999999 78999999999999999999999999999875433211
Q ss_pred --cccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 835 --VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 835 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
........++..|+|||...+..++.++||||||+++|++++|+.||.... .............
T Consensus 153 ~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~~~~~~~~~~~~--------- 218 (265)
T cd05579 153 DDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGET-----PEEIFQNILNGKI--------- 218 (265)
T ss_pred cccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHhcCCc---------
Confidence 112233457889999999988888999999999999999999999996542 1111111111000
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
...........+.+++.+|++.+|.+|||+.++.+.++
T Consensus 219 -~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 219 -EWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred -CCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 00001112456889999999999999999955554443
No 366
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.98 E-value=2.9e-32 Score=322.12 Aligned_cols=258 Identities=27% Similarity=0.389 Sum_probs=205.9
Q ss_pred CcccCeecccCcEEEEEEEEcC-------CCceEEEEEeecc---ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCee
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKK-------NAGTVAVKQLWKG---DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSS 746 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~-------~~~~vavK~~~~~---~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 746 (973)
..+.+.+|+|+||.||+|.... ....||||.++.. .+.+.+..|+++++.+ +||||+.+++++..++..
T Consensus 298 l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~ 377 (609)
T KOG0200|consen 298 LKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPL 377 (609)
T ss_pred ccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCce
Confidence 3555699999999999998651 1457999998763 4567789999999999 699999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhh---------cCCC--CCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCC
Q 002063 747 FLVLEYMPNGNLFQALHKRV---------KEGK--PELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED 815 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~---------~~~~--~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~ 815 (973)
++|+||++.|+|.++++... .... ..+...+.+.++.|||.|++||+ +.++||||+.++|||++.+
T Consensus 378 ~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~---~~~~vHRDLAaRNVLi~~~ 454 (609)
T KOG0200|consen 378 YVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA---SVPCVHRDLAARNVLITKN 454 (609)
T ss_pred EEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh---hCCccchhhhhhhEEecCC
Confidence 99999999999999998764 1111 23888999999999999999999 7899999999999999999
Q ss_pred CceEEecccCCccccCCCCcccc-cccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHH
Q 002063 816 YEPKIADFGVAKIAENSPKVSDY-SCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVY 893 (973)
Q Consensus 816 ~~~kl~Dfgl~~~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~ 893 (973)
..+||+|||+++...+....... ....-+..|||||.+....|+.++|||||||+|||+++ |..||.+.. ...++..
T Consensus 455 ~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~-~~~~l~~ 533 (609)
T KOG0200|consen 455 KVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP-PTEELLE 533 (609)
T ss_pred CEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC-cHHHHHH
Confidence 99999999999976554433211 11113457999999999999999999999999999999 889986521 0111111
Q ss_pred HHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 894 WVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
+++ .....+.+..+..++++++..||+.+|++||++.++++.++..
T Consensus 534 ~l~--------------~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 534 FLK--------------EGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred HHh--------------cCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 111 1122233445567789999999999999999999999999883
No 367
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.98 E-value=4.5e-32 Score=294.69 Aligned_cols=249 Identities=29% Similarity=0.390 Sum_probs=203.2
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec-----cccHHHHHHHHHHHHhcC-CCceeeEeEEEEeCCeeEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-----GDGVKVFAAEMEILGKIR-HRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~-----~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv 749 (973)
++|++.+.||+|+||.||+|+...+++.||+|++.. ....+.+.+|++++++++ ||||+++++++..++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 368889999999999999999998899999998765 233456788999999998 99999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++++|.+++... ..+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.++++|||++...
T Consensus 81 ~e~~~~~~L~~~l~~~-----~~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~ 152 (280)
T cd05581 81 LEYAPNGELLQYIRKY-----GSLDEKCTRFYAAEILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVL 152 (280)
T ss_pred EcCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEecCCcccccc
Confidence 9999999999999753 25899999999999999999999 789999999999999999999999999998766
Q ss_pred cCCCCc------------------ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccH
Q 002063 830 ENSPKV------------------SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDI 891 (973)
Q Consensus 830 ~~~~~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~ 891 (973)
...... .......++..|+|||+..+..++.++||||+|+++|++++|+.||.....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~----- 227 (280)
T cd05581 153 DPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE----- 227 (280)
T ss_pred CCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH-----
Confidence 433221 122234678899999999888899999999999999999999999975421
Q ss_pred HHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCH----HHHHHH
Q 002063 892 VYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPM----REVVKM 949 (973)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~----~evl~~ 949 (973)
............ ..+....+.+.+++.+||+.+|++||++ .+++++
T Consensus 228 ~~~~~~~~~~~~------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 228 YLTFQKILKLEY------------SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred HHHHHHHHhcCC------------CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 111111111000 1111224568899999999999999999 888765
No 368
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.98 E-value=1.1e-31 Score=299.02 Aligned_cols=270 Identities=24% Similarity=0.301 Sum_probs=205.1
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCC-----eeE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGG-----SSF 747 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-----~~~ 747 (973)
+|++.+.||+|++|.||+|+...+++.||||++... ...+.+.+|+++++.++||||+++++++.... ..|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 578899999999999999999988999999988663 34567889999999999999999999987765 789
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+||||++ ++|.+++... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.++|+|||.+.
T Consensus 81 lv~e~~~-~~l~~~l~~~-----~~l~~~~~~~i~~~l~~~l~~LH---~~gi~H~dlkp~nili~~~~~~~L~dfg~~~ 151 (330)
T cd07834 81 IVTELME-TDLHKVIKSP-----QPLTDDHIQYFLYQILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLAR 151 (330)
T ss_pred EEecchh-hhHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccCceE
Confidence 9999996 5888888642 26889999999999999999999 7899999999999999999999999999998
Q ss_pred cccCCCCc-ccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccc--
Q 002063 828 IAENSPKV-SDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE-- 903 (973)
Q Consensus 828 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~-- 903 (973)
........ .......++..|+|||++.+. .++.++||||+|+++|+|++|+.||..... ......+........
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~ 229 (330)
T cd07834 152 GVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDY--IDQLNLIVEVLGTPSEE 229 (330)
T ss_pred eecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCH--HHHHHHHHHhcCCCChh
Confidence 76543210 112234578899999999887 789999999999999999999999965421 110000000000000
Q ss_pred --------cchhhccc---c---ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH--hhcCCCCC
Q 002063 904 --------NVLKVLDC---E---VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM--LADADPCT 957 (973)
Q Consensus 904 --------~~~~~~~~---~---~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~--L~~~~~~~ 957 (973)
.....+.. . ............+.+++.+||+++|++||++.+++++ +++.....
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~ 299 (330)
T cd07834 230 DLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPE 299 (330)
T ss_pred HhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcccc
Confidence 00000000 0 0000111234568899999999999999999999986 55555433
No 369
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.98 E-value=9.2e-32 Score=300.11 Aligned_cols=265 Identities=23% Similarity=0.235 Sum_probs=196.8
Q ss_pred cCCc-ccCeecccCcEEEEEEEEcCCCceEEEEEeeccccH----------------HHHHHHHHHHHhcCCCceeeEeE
Q 002063 676 CNLE-EDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGV----------------KVFAAEMEILGKIRHRNILKLYA 738 (973)
Q Consensus 676 ~~~~-~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~----------------~~~~~E~~~l~~l~hpniv~l~~ 738 (973)
++|. +.+.||+|+||+||+|++..+++.||||++...... ..+.+|++++++++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4555 356799999999999999988999999988653211 14678999999999999999999
Q ss_pred EEEeCCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCce
Q 002063 739 CLLKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEP 818 (973)
Q Consensus 739 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 818 (973)
++..++..++||||++ |+|.+++... ..+++.....++.|++.|++||| +.+++||||+|+||+++.++.+
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~-----~~~~~~~~~~~~~ql~~aL~~LH---~~~i~H~dl~~~nill~~~~~~ 158 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRK-----IRLTESQVKCILLQILNGLNVLH---KWYFMHRDLSPANIFINSKGIC 158 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHeEECCCCCE
Confidence 9999999999999996 6898888642 34788899999999999999999 7899999999999999999999
Q ss_pred EEecccCCccccCCCC------------cccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCccc
Q 002063 819 KIADFGVAKIAENSPK------------VSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEY 885 (973)
Q Consensus 819 kl~Dfgl~~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~ 885 (973)
+++|||.+........ ........++..|+|||++.+. .++.++||||+||++|||++|+.||....
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~ 238 (335)
T PTZ00024 159 KIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGEN 238 (335)
T ss_pred EECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999876542110 1111223467889999998764 46889999999999999999999997542
Q ss_pred CCCccHHHHHHHhhccccc--chhh--------ccccc---cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 886 GDGKDIVYWVSTHLNNHEN--VLKV--------LDCEV---ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~--~~~~--------~~~~~---~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
. .+....+......... .... ..... ..........++.+++.+|++.+|++||++.|++.+-.
T Consensus 239 ~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~ 315 (335)
T PTZ00024 239 E--IDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEY 315 (335)
T ss_pred H--HHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcc
Confidence 1 1111111111000000 0000 00000 00011123456889999999999999999999997544
No 370
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.98 E-value=1.1e-31 Score=288.33 Aligned_cols=240 Identities=25% Similarity=0.287 Sum_probs=186.3
Q ss_pred CeecccCcEEEEEEEEcCCCceEEEEEeeccc-----cHHHHHHHHHHH-HhcCCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----GVKVFAAEMEIL-GKIRHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l-~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
+.||+|+||.||+|....+++.||||++.+.. ....+..|..++ ...+|||++++++++..++..|+||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 56899999999999999889999999886532 122334454443 445899999999999999999999999999
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
++|.+++... ..+++..+..++.|++.||.|+| +.+++||||+|+||++++++.++|+|||++.....
T Consensus 82 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---- 149 (260)
T cd05611 82 GDCASLIKTL-----GGLPEDWAKQYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE---- 149 (260)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeecccceeccc----
Confidence 9999998753 24788889999999999999999 78999999999999999999999999998875432
Q ss_pred ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccC
Q 002063 836 SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVAS 915 (973)
Q Consensus 836 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
.....++..|+|||.+.+..++.++||||+|+++|||++|..||.... ............. ....
T Consensus 150 --~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~--------~~~~ 214 (260)
T cd05611 150 --NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAET-----PDAVFDNILSRRI--------NWPE 214 (260)
T ss_pred --cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhccc--------CCCC
Confidence 122457889999999988888999999999999999999999996531 1111111111110 0000
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 002063 916 ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVK 948 (973)
Q Consensus 916 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~ 948 (973)
.........+.+++.+||+.+|++||++.++.+
T Consensus 215 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~ 247 (260)
T cd05611 215 EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQE 247 (260)
T ss_pred cccccCCHHHHHHHHHHccCCHHHccCCCcHHH
Confidence 111123456889999999999999997754443
No 371
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.98 E-value=5.8e-32 Score=298.70 Aligned_cols=267 Identities=24% Similarity=0.300 Sum_probs=195.5
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeC------
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKG------ 743 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------ 743 (973)
.+++|++.+.||+|+||.||+|++..+++.||||++... .....+.+|++++++++||||+++++++...
T Consensus 6 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred ccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 367899999999999999999999988999999987542 1234567899999999999999999987543
Q ss_pred --CeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEe
Q 002063 744 --GSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIA 821 (973)
Q Consensus 744 --~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 821 (973)
...++||||+++ ++...+... ...+++..+..++.|+++||+||| +.+++||||||+||++++++.++|+
T Consensus 86 ~~~~~~lv~~~~~~-~l~~~~~~~----~~~~~~~~~~~i~~~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~~~l~ 157 (311)
T cd07866 86 KRGSVYMVTPYMDH-DLSGLLENP----SVKLTESQIKCYMLQLLEGINYLH---ENHILHRDIKAANILIDNQGILKIA 157 (311)
T ss_pred cCceEEEEEecCCc-CHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEC
Confidence 346999999964 676666532 346899999999999999999999 7899999999999999999999999
Q ss_pred cccCCccccCCCCc---------ccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccH
Q 002063 822 DFGVAKIAENSPKV---------SDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDI 891 (973)
Q Consensus 822 Dfgl~~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~ 891 (973)
|||++......... .......+++.|+|||++.+. .++.++||||+||++|||++|+.||...... ...
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~-~~~ 236 (311)
T cd07866 158 DFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI-DQL 236 (311)
T ss_pred cCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH-HHH
Confidence 99999765432211 112234568889999987654 5789999999999999999999999643210 011
Q ss_pred HHHHHHhhcc-------cccchh----hccccccC---hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 892 VYWVSTHLNN-------HENVLK----VLDCEVAS---ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 892 ~~~~~~~~~~-------~~~~~~----~~~~~~~~---~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.......... ...... ........ .........+.+++.+|++.||++|||+.|++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 237 HLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 1111000000 000000 00000000 0011223568899999999999999999999865
No 372
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=7.4e-33 Score=275.81 Aligned_cols=256 Identities=21% Similarity=0.292 Sum_probs=197.1
Q ss_pred CeecccCcEEEEEEEEcCCCceEEEEEeecc--ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEEEEEccCCCch
Q 002063 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLEYMPNGNL 758 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~gsL 758 (973)
+.||+|+|+.|--++...++..||||++.+. ....++.+|++++... .|+||++++++|++++..|+|||.|.||+|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl 163 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL 163 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence 5689999999999999999999999999773 4556788999999988 599999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCC---ceEEecccCCccccC----
Q 002063 759 FQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY---EPKIADFGVAKIAEN---- 831 (973)
Q Consensus 759 ~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~---~~kl~Dfgl~~~~~~---- 831 (973)
...++++ ..+.+.+..++..+||.||.||| .+||.|||+||+|||..... -+|||||.+..-..-
T Consensus 164 LshI~~~-----~~F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~ 235 (463)
T KOG0607|consen 164 LSHIQKR-----KHFNEREASRVVKDIASALDFLH---TKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDC 235 (463)
T ss_pred HHHHHHh-----hhccHHHHHHHHHHHHHHHHHHh---hcCcccccCCccceeecCCCCcCceeeeccccccccccCCCC
Confidence 9999865 35788889999999999999999 88999999999999997654 489999988653321
Q ss_pred -CCCcccccccCcccccccccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCc-----cHHHHHHHhh-
Q 002063 832 -SPKVSDYSCFAGTHGYIAPELAY-----TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGK-----DIVYWVSTHL- 899 (973)
Q Consensus 832 -~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~-----~~~~~~~~~~- 899 (973)
...+......+|+..|||||+.. ...|+.+.|.||||||+|-|++|..||.+..+.+- .....-...+
T Consensus 236 spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LF 315 (463)
T KOG0607|consen 236 SPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLF 315 (463)
T ss_pred CCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHH
Confidence 11222334568999999999862 33588899999999999999999999986533211 1100000000
Q ss_pred -cccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 900 -NNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 900 -~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.-++...+ +....+.....+-.+++...+-.||..|.++.+++.+-
T Consensus 316 esIQEGkYe-----FPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhP 362 (463)
T KOG0607|consen 316 ESIQEGKYE-----FPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHP 362 (463)
T ss_pred HHHhccCCc-----CChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCc
Confidence 00111111 12233444555667778888889999999999998854
No 373
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.98 E-value=1.3e-31 Score=299.33 Aligned_cols=265 Identities=21% Similarity=0.278 Sum_probs=196.5
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeC------Ce
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKG------GS 745 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------~~ 745 (973)
.+|...+.||+|+||.||+|++..+++.||||++... .....+.+|+++++.++||||+++++++... ..
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 94 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD 94 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence 5788899999999999999999988999999988652 2234578899999999999999999998654 24
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccC
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
.++|+||+. .+|.++.. ..+++..+..++.|++.|++||| +.+++||||||+||+++.++.++++|||+
T Consensus 95 ~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dlkp~NIll~~~~~~kL~dfg~ 163 (342)
T cd07879 95 FYLVMPYMQ-TDLQKIMG-------HPLSEDKVQYLVYQMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELKILDFGL 163 (342)
T ss_pred EEEEecccc-cCHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCCC
Confidence 699999995 46665442 24788899999999999999999 78999999999999999999999999999
Q ss_pred CccccCCCCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccccc
Q 002063 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
++..... .....++..|+|||++.+ ..++.++|||||||++|||++|+.||..... ...............+.
T Consensus 164 ~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~ 237 (342)
T cd07879 164 ARHADAE-----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY-LDQLTQILKVTGVPGPE 237 (342)
T ss_pred CcCCCCC-----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCCHH
Confidence 8754321 123457889999999876 4688899999999999999999999975311 00111100000000000
Q ss_pred c---------hhhcc--ccccCh----hhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH--hhcCCCCC
Q 002063 905 V---------LKVLD--CEVASE----SIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM--LADADPCT 957 (973)
Q Consensus 905 ~---------~~~~~--~~~~~~----~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~--L~~~~~~~ 957 (973)
. ..... +..... ........+.+++.+|+++||++||++.+++++ ++...+..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~~ 307 (342)
T cd07879 238 FVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDAD 307 (342)
T ss_pred HHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccccc
Confidence 0 00000 000000 011233567899999999999999999999976 77776543
No 374
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.98 E-value=1.3e-31 Score=287.69 Aligned_cols=250 Identities=25% Similarity=0.332 Sum_probs=198.2
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeec-------cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-------GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~-------~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
+|.+.+.||+|+||.||+|++...+..+++|+.+. .....++.+|+.++++++||||+++++++.+++..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 57888999999999999999987766677776543 12334567899999999999999999999998999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++++|.+++.... .....+++..+..++.|+++|++||| +.+++|+||+|+||+++. +.++++|||.+...
T Consensus 81 ~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~ 155 (260)
T cd08222 81 TEYCEGRDLDCKLEELK-HTGKTLSENQVCEWFIQLLLGVHYMH---QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLL 155 (260)
T ss_pred EEeCCCCCHHHHHHHHh-hcccccCHHHHHHHHHHHHHHHHHHH---HcCccccCCChhheEeec-CCEeecccCceeec
Confidence 99999999999987642 23456899999999999999999999 789999999999999975 57999999998765
Q ss_pred cCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhc
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
..... ......|+..|+|||...+..++.++|+||+|+++|+|++|..||... +............
T Consensus 156 ~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~-----~~~~~~~~~~~~~------- 221 (260)
T cd08222 156 MGSCD--LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQ-----NFLSVVLRIVEGP------- 221 (260)
T ss_pred CCCcc--cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCc-----cHHHHHHHHHcCC-------
Confidence 43221 122345788999999998888899999999999999999999999643 1111111111110
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
...........+.+++.+|++.+|++||++.|++++
T Consensus 222 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 222 ----TPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred ----CCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 011123445578899999999999999999999876
No 375
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.98 E-value=1.4e-31 Score=299.11 Aligned_cols=263 Identities=22% Similarity=0.284 Sum_probs=192.5
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeEeEEEEeC----------
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKG---------- 743 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~---------- 743 (973)
.+|++.+.||+|+||+||+|....+++.||+|++... ...+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 5789999999999999999999999999999987653 3456688999999999999999999876543
Q ss_pred ----CeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC-CCce
Q 002063 744 ----GSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE-DYEP 818 (973)
Q Consensus 744 ----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~ 818 (973)
...|+||||++ ++|.+++.. ..+++..+..++.|++.|++||| +.+++||||||+||+++. ++.+
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~------~~l~~~~~~~~~~qi~~aL~~LH---~~givH~dikp~Nili~~~~~~~ 154 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQ------GPLSEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANVFINTEDLVL 154 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCceE
Confidence 35799999996 588887753 24788899999999999999999 789999999999999974 5678
Q ss_pred EEecccCCccccCCCCc-ccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHH
Q 002063 819 KIADFGVAKIAENSPKV-SDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVS 896 (973)
Q Consensus 819 kl~Dfgl~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~ 896 (973)
+++|||.+......... .......++..|+|||++.+ ..++.++|||||||++|+|++|+.||...... ........
T Consensus 155 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~-~~~~~~~~ 233 (342)
T cd07854 155 KIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHEL-EQMQLILE 233 (342)
T ss_pred EECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH
Confidence 99999998765332111 11122357889999998654 56788999999999999999999999643210 00000000
Q ss_pred Hhhcc-c---c----cchhhcc--ccccC----hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 897 THLNN-H---E----NVLKVLD--CEVAS----ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 897 ~~~~~-~---~----~~~~~~~--~~~~~----~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
..... . . ....... ..... ........++.+++.+|+++||++||++.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 234 SVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred hcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 00000 0 0 0000000 00000 0011234567899999999999999999999864
No 376
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.98 E-value=2.5e-31 Score=296.97 Aligned_cols=258 Identities=22% Similarity=0.329 Sum_probs=194.7
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCC------
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGG------ 744 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~------ 744 (973)
.++|++.+.||+|+||.||+|....++..||||++... .....+.+|++++++++||||+++++++..+.
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFH 93 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccc
Confidence 45799999999999999999999988999999988542 22345778999999999999999999987543
Q ss_pred eeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEeccc
Q 002063 745 SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFG 824 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 824 (973)
..++||||+ +++|.+++.. ..+++..+..++.|++.|++||| +.+++||||||+||+++.++.++++|||
T Consensus 94 ~~~lv~e~~-~~~l~~~~~~------~~l~~~~~~~i~~qi~~al~~LH---~~gi~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 94 DFYLVMPFM-GTDLGKLMKH------EKLSEDRIQFLVYQMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred eEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecc
Confidence 458999999 7789887753 24789999999999999999999 7899999999999999999999999999
Q ss_pred CCccccCCCCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHH----------
Q 002063 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVY---------- 893 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~---------- 893 (973)
++...... .....++..|+|||++.+ ..++.++|+||+|+++|++++|+.||...... .....
T Consensus 164 ~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~ 237 (343)
T cd07880 164 LARQTDSE-----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHL-DQLMEIMKVTGTPSK 237 (343)
T ss_pred cccccccC-----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCH
Confidence 98755332 122356889999999865 45788999999999999999999999754210 00000
Q ss_pred -HHHHhhccc-ccchhhcccccc----ChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 894 -WVSTHLNNH-ENVLKVLDCEVA----SESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 894 -~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
+........ ......+ +... ..........+.+++.+|++.||++||++.+++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 238 EFVQKLQSEDAKNYVKKL-PRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred HHHHhhcchhHHHHHHhc-cccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000000 0000000 0000 00111234468899999999999999999999954
No 377
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.97 E-value=2.7e-31 Score=296.92 Aligned_cols=262 Identities=23% Similarity=0.289 Sum_probs=195.2
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeC------
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKG------ 743 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------ 743 (973)
..++|++.+.||+|+||.||+|.+..+++.||+|++... ...+.+.+|++++++++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (345)
T cd07877 15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 94 (345)
T ss_pred ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccc
Confidence 346899999999999999999999888999999988653 2245677899999999999999999988643
Q ss_pred CeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecc
Q 002063 744 GSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADF 823 (973)
Q Consensus 744 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 823 (973)
...|++++++ +++|.+++.. ..+++..+..++.|+++|++||| +.+++||||||+||++++++.++|+||
T Consensus 95 ~~~~lv~~~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~df 164 (345)
T cd07877 95 NDVYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 164 (345)
T ss_pred ccEEEEehhc-ccCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEcCCCCEEEecc
Confidence 3468888887 7899887753 24789999999999999999999 789999999999999999999999999
Q ss_pred cCCccccCCCCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccc
Q 002063 824 GVAKIAENSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH 902 (973)
Q Consensus 824 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~ 902 (973)
|++...... .....++..|+|||++.+ ..++.++||||+||++|||++|+.||...... ..............
T Consensus 165 g~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~ 238 (345)
T cd07877 165 GLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 238 (345)
T ss_pred ccccccccc-----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCC
Confidence 998754322 123457889999998866 46788999999999999999999999643110 11111100000000
Q ss_pred ccchhhccc-----------cccC----hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 903 ENVLKVLDC-----------EVAS----ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 903 ~~~~~~~~~-----------~~~~----~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
......... .... .........+.+++.+|++.||.+||++.+++++-.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~ 302 (345)
T cd07877 239 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 302 (345)
T ss_pred HHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChh
Confidence 000000000 0000 000012346789999999999999999999998753
No 378
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.97 E-value=2.1e-31 Score=290.63 Aligned_cols=254 Identities=24% Similarity=0.267 Sum_probs=197.2
Q ss_pred CCcccCeecccCcEEEEEEEEc---CCCceEEEEEeecc------ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCee
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLK---KNAGTVAVKQLWKG------DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSS 746 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~---~~~~~vavK~~~~~------~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 746 (973)
+|++.+.||+|++|.||+|+.. .+++.||||++.+. ...+.+.+|+++++++ +||+|+++++++..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4778899999999999999864 45788999988652 2335578899999999 599999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
++||||+++|+|.+++... ..+++..+..++.|+++||+||| +.+++||||+|+||+++.++.++++|||++
T Consensus 81 ~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~~~l~dfg~~ 152 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR-----EHFTESEVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLS 152 (288)
T ss_pred EEEEecCCCCcHHHHHhhc-----CCcCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEEECccc
Confidence 9999999999999998642 34788889999999999999999 789999999999999999999999999998
Q ss_pred ccccCCCCcccccccCcccccccccccccCC--CCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccccc
Q 002063 827 KIAENSPKVSDYSCFAGTHGYIAPELAYTCK--VSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
......... ......|+..|+|||...+.. .+.++||||+|+++|||++|..||..... ................
T Consensus 153 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~- 229 (288)
T cd05583 153 KEFLAEEEE-RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGE-QNSQSEISRRILKSKP- 229 (288)
T ss_pred ccccccccc-ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcc-cchHHHHHHHHHccCC-
Confidence 765433211 112245788999999987655 77899999999999999999999964311 1111111111111110
Q ss_pred chhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
..+......+.+++.+||+.+|++|||+.++.+.|+.
T Consensus 230 -----------~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 230 -----------PFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred -----------CCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 0111233457889999999999999998887766654
No 379
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=3e-31 Score=289.70 Aligned_cols=251 Identities=25% Similarity=0.301 Sum_probs=196.2
Q ss_pred CCcccCeecccCcEEEEEEEEc---CCCceEEEEEeecc------ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCee
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLK---KNAGTVAVKQLWKG------DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSS 746 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~---~~~~~vavK~~~~~------~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 746 (973)
+|++.+.||+|+||.||+|+.. .+|+.||+|++... ...+.+.+|+++++++ +||+|+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 4778899999999999999874 46889999988652 2345678899999999 599999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
|+||||+++++|.+++... ..+++..+..++.|++.||+||| +.+++||||+|+||+++.++.++|+|||++
T Consensus 81 ~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~ 152 (290)
T cd05613 81 HLILDYINGGELFTHLSQR-----ERFKEQEVQIYSGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLS 152 (290)
T ss_pred EEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEECCCCCEEEeeCccc
Confidence 9999999999999998753 34778888899999999999999 789999999999999999999999999998
Q ss_pred ccccCCCCcccccccCcccccccccccccC--CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccccc
Q 002063 827 KIAENSPKVSDYSCFAGTHGYIAPELAYTC--KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
........ .......|+..|+|||++.+. .++.++||||+|+++|+|++|+.||.... ..................
T Consensus 153 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~-~~~~~~~~~~~~~~~~~~ 230 (290)
T cd05613 153 KEFHEDEV-ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDG-EKNSQAEISRRILKSEPP 230 (290)
T ss_pred eecccccc-cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCC-ccccHHHHHHHhhccCCC
Confidence 76533221 122234588899999998653 46789999999999999999999996431 111222222211111111
Q ss_pred chhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 002063 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRP-----PMREVVKM 949 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 949 (973)
.+......+.+++.+|++.||++|| ++.+++++
T Consensus 231 ------------~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 231 ------------YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred ------------CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 1112345678899999999999997 67777765
No 380
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.97 E-value=5.4e-31 Score=292.16 Aligned_cols=259 Identities=25% Similarity=0.343 Sum_probs=196.3
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec----cccHHHHHHHHHHHHhcCCCceeeEeEEEEe-CCeeEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK----GDGVKVFAAEMEILGKIRHRNILKLYACLLK-GGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~~l 748 (973)
..++|++.+.||+|+||.||+|++..+++.||||++.+ ....+.+.+|++++++++||||+++.+++.. ....|+
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~l 87 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYF 87 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEE
Confidence 45689999999999999999999999999999998754 2334667889999999999999999998865 567899
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+ +++|.++++.. .+++.....++.|+++|++||| +.+++||||+|+||++++++.++++|||.+..
T Consensus 88 v~e~~-~~~L~~~~~~~------~~~~~~~~~~~~ql~~aL~~LH---~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~ 157 (328)
T cd07856 88 VTELL-GTDLHRLLTSR------PLEKQFIQYFLYQILRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLARI 157 (328)
T ss_pred Eeehh-ccCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEeECCCCCEEeCccccccc
Confidence 99999 66888887632 4677788889999999999999 78999999999999999999999999999875
Q ss_pred ccCCCCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccc----
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE---- 903 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~---- 903 (973)
.... .....++..|+|||++.+ ..++.++||||+||++|+|++|+.||..... ......+........
T Consensus 158 ~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~--~~~~~~~~~~~~~~~~~~~ 230 (328)
T cd07856 158 QDPQ-----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDH--VNQFSIITDLLGTPPDDVI 230 (328)
T ss_pred cCCC-----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCCHHHH
Confidence 4322 122356889999998765 5688999999999999999999999964321 000000000000000
Q ss_pred ------cchhhc----ccccc--ChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 904 ------NVLKVL----DCEVA--SESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 904 ------~~~~~~----~~~~~--~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
...+.. ..... ..........+.+++.+|++.+|++||++.+++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 231 NTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000 00000 00011234678899999999999999999999988
No 381
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=1.8e-31 Score=290.22 Aligned_cols=260 Identities=26% Similarity=0.325 Sum_probs=199.1
Q ss_pred CcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
|+..+.||+|++|.||+|+...+++.||+|++... ...+.+.+|++++++++|||++++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 56678899999999999999998999999988753 23456788999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
+ ++|.+++... ...+++..+..++.|++.|++||| +.+++||||+|+||++++++.++|+|||.+.......
T Consensus 81 ~-~~l~~~i~~~----~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~ 152 (282)
T cd07829 81 D-MDLKKYLDKR----PGPLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPL 152 (282)
T ss_pred C-cCHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCCcccccCCCc
Confidence 7 5899999764 145889999999999999999999 7899999999999999999999999999987664332
Q ss_pred CcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccc----------
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH---------- 902 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~---------- 902 (973)
. ......++..|+|||++.+. .++.++||||+||++||+++|+.||..... ......+.......
T Consensus 153 ~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 228 (282)
T cd07829 153 R--TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSE--IDQLFKIFQILGTPTEESWPGVTK 228 (282)
T ss_pred c--ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccH--HHHHHHHHHHhCCCcHHHHHhhcc
Confidence 2 22233457789999998766 788999999999999999999999965321 00000010000000
Q ss_pred ----ccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 903 ----ENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 903 ----~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
......................+.+++.+|++.+|++||++.+++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 229 LPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred cccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 00000000000001111224578999999999999999999999875
No 382
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=1.2e-31 Score=299.84 Aligned_cols=258 Identities=24% Similarity=0.316 Sum_probs=196.6
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCe-----
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGS----- 745 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~----- 745 (973)
.++|++.+.||+|++|.||+|++..+++.||||++... ...+.+.+|+.++++++|||++++.+++..++.
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ 93 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence 45789999999999999999999988999999987642 234557789999999999999999988866554
Q ss_pred -eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEeccc
Q 002063 746 -SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFG 824 (973)
Q Consensus 746 -~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 824 (973)
.++|+||+ +++|.+++.. ..+++..+..++.|++.|++||| +.+++||||+|+||+++.++.++|+|||
T Consensus 94 ~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 94 DVYLVTHLM-GADLNNIVKC------QKLSDDHIQFLVYQILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred cEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEcccc
Confidence 89999999 6799888864 35889999999999999999999 7899999999999999999999999999
Q ss_pred CCccccCCCCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccc
Q 002063 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE 903 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 903 (973)
++...... .....++..|+|||.+.+ ..++.++||||+||++||+++|+.||..... ......+........
T Consensus 164 ~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~--~~~~~~i~~~~~~~~ 236 (343)
T cd07851 164 LARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDH--IDQLKRIMNLVGTPD 236 (343)
T ss_pred cccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHhcCCCC
Confidence 98765332 222457889999998765 3678899999999999999999999964321 110000000000000
Q ss_pred -c---------chhhcc---ccccC---hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 904 -N---------VLKVLD---CEVAS---ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 904 -~---------~~~~~~---~~~~~---~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
. ....+. ..... ........++.+++.+|++.+|++|||+.+|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 237 EELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred HHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 0 000000 00000 0011235678899999999999999999999886
No 383
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.9e-31 Score=279.23 Aligned_cols=153 Identities=22% Similarity=0.330 Sum_probs=132.6
Q ss_pred ccccccccccccccccCHHHh-cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccH-HHHHHHHHHHHhcC---
Q 002063 655 EVSSKWKLASFHHIDIDAEQI-CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGV-KVFAAEMEILGKIR--- 729 (973)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~-~~~~~E~~~l~~l~--- 729 (973)
+....|....+|++.|++... .+|.+.++||.|.|++||+|.+....+.||+|+.+..+.+ +....|+++|++++
T Consensus 56 E~~~dY~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~D 135 (590)
T KOG1290|consen 56 EDPEDYRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGD 135 (590)
T ss_pred cChhhhhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcC
Confidence 345567788999999998888 8999999999999999999999999999999999886544 34578999999983
Q ss_pred --C---CceeeEeEEEEe----CCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCe
Q 002063 730 --H---RNILKLYACLLK----GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPI 800 (973)
Q Consensus 730 --h---pniv~l~~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~i 800 (973)
| .+||+++++|.. +.+++||+|++ |.+|..++.... -..++...+..|+.||+.||.|||++| +|
T Consensus 136 p~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~---YrGlpl~~VK~I~~qvL~GLdYLH~ec--gI 209 (590)
T KOG1290|consen 136 PNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSN---YRGLPLSCVKEICRQVLTGLDYLHREC--GI 209 (590)
T ss_pred CCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhC---CCCCcHHHHHHHHHHHHHHHHHHHHhc--Cc
Confidence 2 479999999975 56899999999 779999998653 345889999999999999999999966 99
Q ss_pred EecCCCCCCeeec
Q 002063 801 IHRDIKSSNILLD 813 (973)
Q Consensus 801 vH~Dlkp~Nill~ 813 (973)
||.||||+|||+.
T Consensus 210 IHTDlKPENvLl~ 222 (590)
T KOG1290|consen 210 IHTDLKPENVLLC 222 (590)
T ss_pred cccCCCcceeeee
Confidence 9999999999984
No 384
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.97 E-value=3.3e-31 Score=295.07 Aligned_cols=263 Identities=24% Similarity=0.272 Sum_probs=192.9
Q ss_pred CCcccCeecccCcEEEEEEEEcCC--CceEEEEEeecc----ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeC----Ce
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKN--AGTVAVKQLWKG----DGVKVFAAEMEILGKI-RHRNILKLYACLLKG----GS 745 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~--~~~vavK~~~~~----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~----~~ 745 (973)
+|++.+.||+|+||.||+|+...+ +..||+|++... ...+.+.+|+++++++ +||||+++++++... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 477889999999999999999887 889999987642 2345678899999999 599999999875432 45
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccC
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
.|+++||++ ++|.+++.. ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.++|+|||+
T Consensus 81 ~~~~~e~~~-~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl~Dfg~ 151 (332)
T cd07857 81 LYLYEELME-ADLHQIIRS-----GQPLTDAHFQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGL 151 (332)
T ss_pred EEEEEeccc-CCHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEeCcCCC
Confidence 789999985 689888864 235789999999999999999999 78999999999999999999999999999
Q ss_pred CccccCCCCc--ccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhc--
Q 002063 826 AKIAENSPKV--SDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLN-- 900 (973)
Q Consensus 826 ~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~-- 900 (973)
+......... .......|+..|+|||+..+ ..++.++||||+||++|++++|+.||..... ............
T Consensus 152 a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~ 229 (332)
T cd07857 152 ARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDY--VDQLNQILQVLGTP 229 (332)
T ss_pred ceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCH--HHHHHHHHHHhCCC
Confidence 9865432211 11223468899999998765 4688999999999999999999999965321 000000000000
Q ss_pred ---------ccc--cchhhcccccc---ChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 901 ---------NHE--NVLKVLDCEVA---SESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 901 ---------~~~--~~~~~~~~~~~---~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
... ........... ..........+.+++.+|+++||.+|||+.+++++=
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~ 293 (332)
T cd07857 230 DEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHP 293 (332)
T ss_pred CHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 000 00000000000 000011245688999999999999999999998663
No 385
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=6.9e-31 Score=280.22 Aligned_cols=238 Identities=32% Similarity=0.369 Sum_probs=193.9
Q ss_pred ecccCcEEEEEEEEcCCCceEEEEEeeccc-----cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCCch
Q 002063 684 IGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNGNL 758 (973)
Q Consensus 684 lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL 758 (973)
||+|+||.||++....+++.||+|++.... ....+.+|++++++++||||+++++.+..+...++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999999889999999886532 345788999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcccc
Q 002063 759 FQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDY 838 (973)
Q Consensus 759 ~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 838 (973)
.+++... ..+++..+..++.|+++|+.|+| +.+++|+||+|+||+++.++.++++|||.+....... ...
T Consensus 81 ~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~ 150 (250)
T cd05123 81 FSHLSKE-----GRFSEERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG--SRT 150 (250)
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceecccCC--Ccc
Confidence 9999753 25789999999999999999999 7899999999999999999999999999987664332 112
Q ss_pred cccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhh
Q 002063 839 SCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESI 918 (973)
Q Consensus 839 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (973)
....++..|+|||...+...+.++|+||||+++|++++|+.||..... ............ ..+
T Consensus 151 ~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~~~~~------------~~~ 213 (250)
T cd05123 151 NTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-----KEIYEKILKDPL------------RFP 213 (250)
T ss_pred cCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHhcCCC------------CCC
Confidence 234578899999999888889999999999999999999999965321 122121111111 011
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCH---HHHHH
Q 002063 919 KEDMIKLLKIAVVCTTKLPNLRPPM---REVVK 948 (973)
Q Consensus 919 ~~~~~~l~~l~~~cl~~dP~~Rpt~---~evl~ 948 (973)
......+.+++.+||..||++||++ .++++
T Consensus 214 ~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~ 246 (250)
T cd05123 214 EFLSPEARDLISGLLQKDPTKRLGSGGAEEIKA 246 (250)
T ss_pred CCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHh
Confidence 1124567889999999999999999 55554
No 386
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=6.7e-31 Score=315.79 Aligned_cols=145 Identities=33% Similarity=0.413 Sum_probs=131.5
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc-----cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
+++|++.++||+|+||+||+|++..+++.||||++.... ....+.+|+.+++.++||||+++++++......|+|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 468899999999999999999999889999999986532 235688899999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
|||+++++|.+++... ..+++..++.++.||+.||+||| ..+|+||||||+|||++.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~~-----~~l~~~~~~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHIY-----GYFDEEMAVKYISEVALALDYLH---RHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 9999999999999753 24678888999999999999999 7899999999999999999999999999875
No 387
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=4.1e-32 Score=278.73 Aligned_cols=265 Identities=22% Similarity=0.244 Sum_probs=202.7
Q ss_pred HHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccH-HHHHHHHHHHHhcC--CC----ceeeEeEEEEeCC
Q 002063 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGV-KVFAAEMEILGKIR--HR----NILKLYACLLKGG 744 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~-~~~~~E~~~l~~l~--hp----niv~l~~~~~~~~ 744 (973)
.....+|++...+|+|.||.|-++.+.+++..||||+++.-..+ +...-|+++++++. .| -+|++.++|.-.+
T Consensus 85 D~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrg 164 (415)
T KOG0671|consen 85 DILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRG 164 (415)
T ss_pred cccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccC
Confidence 44567999999999999999999999998999999998774333 33456999999993 23 3788889999999
Q ss_pred eeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC----------
Q 002063 745 SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE---------- 814 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~---------- 814 (973)
+.++|+|.+ |-|+++++..+ ...+++...+..|+.|++++++||| +.+++|-|+||+||++.+
T Consensus 165 hiCivfell-G~S~~dFlk~N---~y~~fpi~~ir~m~~QL~~sv~fLh---~~kl~HTDLKPENILfvss~~~~~~~~k 237 (415)
T KOG0671|consen 165 HICIVFELL-GLSTFDFLKEN---NYIPFPIDHIRHMGYQLLESVAFLH---DLKLTHTDLKPENILFVSSEYFKTYNPK 237 (415)
T ss_pred ceEEEEecc-ChhHHHHhccC---CccccchHHHHHHHHHHHHHHHHHH---hcceeecCCChheEEEeccceEEEeccC
Confidence 999999998 67999999864 4556888999999999999999999 899999999999999832
Q ss_pred ----------CCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcc
Q 002063 815 ----------DYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEE 884 (973)
Q Consensus 815 ----------~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~ 884 (973)
+..+++.|||.|+...... +..+.|..|+|||++.+-.++.++||||+||||+|+.+|...|+.-
T Consensus 238 ~~~~~~r~~ks~~I~vIDFGsAtf~~e~h-----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtH 312 (415)
T KOG0671|consen 238 KKVCFIRPLKSTAIKVIDFGSATFDHEHH-----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTH 312 (415)
T ss_pred CccceeccCCCcceEEEecCCcceeccCc-----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccC
Confidence 2358999999998654332 4467899999999999999999999999999999999999999753
Q ss_pred cCCCccHHHHHHHhhcccc----------------cc-----------hhhccccc----cChhhHHHHHHHHHHHHHhc
Q 002063 885 YGDGKDIVYWVSTHLNNHE----------------NV-----------LKVLDCEV----ASESIKEDMIKLLKIAVVCT 933 (973)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~----------------~~-----------~~~~~~~~----~~~~~~~~~~~l~~l~~~cl 933 (973)
. +-+.+ .+....+...+ .+ ..+.+... .......+..+|.+++.+|+
T Consensus 313 e-n~EHL-aMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL 390 (415)
T KOG0671|consen 313 E-NLEHL-AMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRML 390 (415)
T ss_pred C-cHHHH-HHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHH
Confidence 2 11111 11111110000 00 00000000 00112344567999999999
Q ss_pred CCCCCCCCCHHHHHHHh
Q 002063 934 TKLPNLRPPMREVVKML 950 (973)
Q Consensus 934 ~~dP~~Rpt~~evl~~L 950 (973)
..||.+|+|+.|++.|-
T Consensus 391 ~fDP~~RiTl~EAL~Hp 407 (415)
T KOG0671|consen 391 EFDPARRITLREALSHP 407 (415)
T ss_pred ccCccccccHHHHhcCH
Confidence 99999999999998763
No 388
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-31 Score=272.28 Aligned_cols=260 Identities=22% Similarity=0.256 Sum_probs=208.1
Q ss_pred cCCcccCeecccCcEEEEEEEEcCC-----CceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEe-CCee
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKN-----AGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLK-GGSS 746 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~-----~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~ 746 (973)
++++....+-+|.||+||.|.+.+. .+.|-||.++.. -....+..|.-.+..+.|||+..+.+++.+ .+.+
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P 363 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATP 363 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcc
Confidence 4677778889999999999987643 344667766543 344567788889999999999999998754 5678
Q ss_pred EEEEEccCCCchHHHHHhhhc---CCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecc
Q 002063 747 FLVLEYMPNGNLFQALHKRVK---EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADF 823 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~---~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 823 (973)
+.+|.++.-|+|..++..... .....+...+...++.|++.|++||| ++++||.||.++|.+|++.-++|++|=
T Consensus 364 ~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh---~~~ViHkDiAaRNCvIdd~LqVkltDs 440 (563)
T KOG1024|consen 364 FVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH---NHGVIHKDIAARNCVIDDQLQVKLTDS 440 (563)
T ss_pred eEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH---hcCcccchhhhhcceehhheeEEeccc
Confidence 999999999999999985421 12334667788899999999999999 899999999999999999999999999
Q ss_pred cCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhccc
Q 002063 824 GVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNH 902 (973)
Q Consensus 824 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~ 902 (973)
.+++..-+.+...-......+..||+||.+....|+.++|||||||++|||+| |+.||.+.+ +.+ +...
T Consensus 441 aLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeID-----PfE-m~~y---- 510 (563)
T KOG1024|consen 441 ALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEID-----PFE-MEHY---- 510 (563)
T ss_pred hhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccC-----HHH-HHHH----
Confidence 99998876655444444556889999999999999999999999999999999 999997642 111 1112
Q ss_pred ccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 903 ENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
+....+-.++.+++.+++.++.-||+.+|++||++++++.-|.+..
T Consensus 511 ------lkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~ 556 (563)
T KOG1024|consen 511 ------LKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFH 556 (563)
T ss_pred ------HhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 2222223345566778999999999999999999999999888754
No 389
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=5.7e-31 Score=278.07 Aligned_cols=220 Identities=24% Similarity=0.217 Sum_probs=177.5
Q ss_pred cCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCCchHHHHHhhh
Q 002063 687 GGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNGNLFQALHKRV 766 (973)
Q Consensus 687 G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 766 (973)
|.+|+||+|++..+++.||+|++.... .+.+|...+....||||+++++++..++..++||||+++|+|.+++...
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~- 79 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS---EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKF- 79 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh---hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHh-
Confidence 899999999999999999999987643 2344555556667999999999999999999999999999999998753
Q ss_pred cCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcccccccCcccc
Q 002063 767 KEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHG 846 (973)
Q Consensus 767 ~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~ 846 (973)
..+++..+..++.|+++|++|+| +.+++||||||+||+++.++.++++|||.+....... ....++..
T Consensus 80 ----~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~-----~~~~~~~~ 147 (237)
T cd05576 80 ----LNIPEECVKRWAAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC-----DGEAVENM 147 (237)
T ss_pred ----cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhcccccc-----ccCCcCcc
Confidence 24789999999999999999999 7899999999999999999999999999876554321 12345678
Q ss_pred cccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHH
Q 002063 847 YIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLL 926 (973)
Q Consensus 847 y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 926 (973)
|+|||...+..++.++||||+|+++|||++|+.|+...... ..... .. ..+......+.
T Consensus 148 y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----------~~~~~------~~----~~~~~~~~~~~ 206 (237)
T cd05576 148 YCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-----------INTHT------TL----NIPEWVSEEAR 206 (237)
T ss_pred ccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-----------ccccc------cc----CCcccCCHHHH
Confidence 99999998888999999999999999999999887532100 00000 00 01112345678
Q ss_pred HHHHHhcCCCCCCCCCH
Q 002063 927 KIAVVCTTKLPNLRPPM 943 (973)
Q Consensus 927 ~l~~~cl~~dP~~Rpt~ 943 (973)
+++.+|++.||++||++
T Consensus 207 ~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 207 SLLQQLLQFNPTERLGA 223 (237)
T ss_pred HHHHHHccCCHHHhcCC
Confidence 89999999999999997
No 390
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=7.2e-32 Score=276.81 Aligned_cols=243 Identities=27% Similarity=0.360 Sum_probs=190.0
Q ss_pred HHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCe
Q 002063 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGS 745 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~ 745 (973)
.....+|....+||+|+||+|.+|..+.+.+.+|||+++++ ++.+--..|-++|.-- +-|.++++..+|+.-++
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDR 424 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDR 424 (683)
T ss_pred ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhh
Confidence 34456889999999999999999999999999999998874 2333334566666555 57899999999999999
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccC
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
.|.||||+.||+|--.+++. ..+.+..+.-+|..||-||-||| +++|++||+|.+|||++.+|++||+|||+
T Consensus 425 LyFVMEyvnGGDLMyhiQQ~-----GkFKEp~AvFYAaEiaigLFFLh---~kgIiYRDLKLDNvmLd~eGHiKi~DFGm 496 (683)
T KOG0696|consen 425 LYFVMEYVNGGDLMYHIQQV-----GKFKEPVAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGM 496 (683)
T ss_pred eeeEEEEecCchhhhHHHHh-----cccCCchhhhhhHHHHHHhhhhh---cCCeeeeeccccceEeccCCceEeeeccc
Confidence 99999999999998878764 24556667778999999999999 89999999999999999999999999999
Q ss_pred CccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccc
Q 002063 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
++.---. ......++||+.|+|||++.-.+|+.++|+||+||+||||+.|+.||++++ +..+. ...
T Consensus 497 cKEni~~--~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeD--E~elF---~aI------- 562 (683)
T KOG0696|consen 497 CKENIFD--GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED--EDELF---QAI------- 562 (683)
T ss_pred ccccccC--CcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCC--HHHHH---HHH-------
Confidence 8732222 223445789999999999999999999999999999999999999998752 22211 111
Q ss_pred hhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCC
Q 002063 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRP 941 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp 941 (973)
.+.+. ..+.-.+.+...+....+.+.|.+|.
T Consensus 563 ---~ehnv--syPKslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 563 ---MEHNV--SYPKSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred ---HHccC--cCcccccHHHHHHHHHHhhcCCcccc
Confidence 11111 11223334455666667788898885
No 391
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.4e-31 Score=291.52 Aligned_cols=244 Identities=24% Similarity=0.256 Sum_probs=197.1
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
...|+....+|.|+|+.|-.+.+..+++..+||++.+. ..+-.+|+.++... +||||+++.+.+.++.+.|+|||.+
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~--~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l 398 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR--ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELL 398 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccc--ccccccccchhhhhcCCCcceeecceecCCceeeeeehhc
Confidence 45677777899999999999999999999999998765 23345778776666 7999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeee-cCCCceEEecccCCccccCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL-DEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill-~~~~~~kl~Dfgl~~~~~~~ 832 (973)
.++-+.+.+... +... ..+..|+.+|+.|+.||| ++|+||||+||+|||+ +++++++|+|||.++.....
T Consensus 399 ~g~ell~ri~~~-----~~~~-~e~~~w~~~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 399 DGGELLRRIRSK-----PEFC-SEASQWAAELVSAVDYLH---EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred cccHHHHHHHhc-----chhH-HHHHHHHHHHHHHHHHHH---hcCeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 999888877643 1222 566679999999999999 7899999999999999 68999999999999866544
Q ss_pred CCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
....+-|..|.|||+.....|++++|+||||++||+|++|+.||..-..+ ..+...+...+
T Consensus 470 -----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-----~ei~~~i~~~~--------- 530 (612)
T KOG0603|consen 470 -----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-----IEIHTRIQMPK--------- 530 (612)
T ss_pred -----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-----HHHHHhhcCCc---------
Confidence 11223578899999999999999999999999999999999999764322 11111111111
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
.....+....+++.+|++.||.+||++.++..+-.-
T Consensus 531 ----~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 531 ----FSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred ----cccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 113345567889999999999999999999988766
No 392
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-30 Score=292.48 Aligned_cols=254 Identities=27% Similarity=0.365 Sum_probs=209.4
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhc-CCCceeeEeEEEEe-----CCeeE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKI-RHRNILKLYACLLK-----GGSSF 747 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~-----~~~~~ 747 (973)
.+.|++.++||.|.+|.||+++.+++++.+|||+.... ...+++..|+.+++.. .|||++.++++|.. ++..|
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLW 97 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLW 97 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEE
Confidence 45678999999999999999999999999999987663 4456678899999888 69999999999863 57899
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+|||||.+||..|+++.-. ...+.|..+.-|.+.++.|+.+|| .+.++|||||-.||+++.++.||++|||++.
T Consensus 98 LVMEfC~gGSVTDLVKn~~---g~rl~E~~IaYI~re~lrgl~HLH---~nkviHRDikG~NiLLT~e~~VKLvDFGvSa 171 (953)
T KOG0587|consen 98 LVMEFCGGGSVTDLVKNTK---GNRLKEEWIAYILREILRGLAHLH---NNKVIHRDIKGQNVLLTENAEVKLVDFGVSA 171 (953)
T ss_pred EEeeccCCccHHHHHhhhc---ccchhhHHHHHHHHHHHHHHHHHh---hcceeeecccCceEEEeccCcEEEeeeeeee
Confidence 9999999999999998753 556889999999999999999999 8899999999999999999999999999998
Q ss_pred cccCCCCcccccccCcccccccccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccc
Q 002063 828 IAENSPKVSDYSCFAGTHGYIAPELAY-----TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH 902 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~ 902 (973)
..... .......+||+.|||||++. ...|+..+|+||||++..||.-|..|+.++.. +.....-
T Consensus 172 QldsT--~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHP-------mraLF~I-- 240 (953)
T KOG0587|consen 172 QLDST--VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHP-------MRALFLI-- 240 (953)
T ss_pred eeecc--cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcch-------hhhhccC--
Confidence 66433 23344578999999999984 34578899999999999999999999976521 1111110
Q ss_pred ccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 903 ENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.-++......+....+++-+++..|+.+|.++||++.++++|-
T Consensus 241 -----pRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hp 283 (953)
T KOG0587|consen 241 -----PRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHP 283 (953)
T ss_pred -----CCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCC
Confidence 0112222234667788999999999999999999999998763
No 393
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=5.7e-33 Score=267.89 Aligned_cols=269 Identities=22% Similarity=0.308 Sum_probs=199.2
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec----cccHHHHHHHHHHHHhcCCCceeeEeEEEEe-------
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK----GDGVKVFAAEMEILGKIRHRNILKLYACLLK------- 742 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~------- 742 (973)
..+.|+...+||+|.||+||+|+.+++++.||+|+..- +.-.....+|++++..++|+|++.+++.|..
T Consensus 15 ~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r 94 (376)
T KOG0669|consen 15 EVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNR 94 (376)
T ss_pred cchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccc
Confidence 34567888899999999999999999999999997543 2223446799999999999999999988743
Q ss_pred -CCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEe
Q 002063 743 -GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIA 821 (973)
Q Consensus 743 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 821 (973)
....|+||++|++ +|.-.+... ...++...+.+++.++..||.|+| +..|+|||+||.|++|+.+|.+||+
T Consensus 95 ~r~t~ylVf~~ceh-DLaGlLsn~----~vr~sls~Ikk~Mk~Lm~GL~~iH---r~kilHRDmKaaNvLIt~dgilklA 166 (376)
T KOG0669|consen 95 DRATFYLVFDFCEH-DLAGLLSNR----KVRFSLSEIKKVMKGLMNGLYYIH---RNKILHRDMKAANVLITKDGILKLA 166 (376)
T ss_pred ccceeeeeHHHhhh-hHHHHhcCc----cccccHHHHHHHHHHHHHHHHHHH---HhhHHhhcccHhhEEEcCCceEEee
Confidence 2347999999976 787777543 456888999999999999999999 7899999999999999999999999
Q ss_pred cccCCccccCC--CCcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHh
Q 002063 822 DFGVAKIAENS--PKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTH 898 (973)
Q Consensus 822 Dfgl~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~ 898 (973)
|||+++.+... ....+++..+-|..|++||.+.|. .|+++.|||+.||++.||++|.+-+++.. +..-...+...
T Consensus 167 DFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnt--eqqql~~Is~L 244 (376)
T KOG0669|consen 167 DFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNT--EQQQLHLISQL 244 (376)
T ss_pred ccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCCh--HHHHHHHHHHH
Confidence 99999765432 223345667779999999988754 68999999999999999999998887542 11111111111
Q ss_pred hcc--------ccc--chhhcccc-ccChh---hHHHH------HHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 899 LNN--------HEN--VLKVLDCE-VASES---IKEDM------IKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 899 ~~~--------~~~--~~~~~~~~-~~~~~---~~~~~------~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
... -+. +.+.+..+ +.... .++.. ..-.+++..++..||.+|+++++++.|-.=
T Consensus 245 cGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F 318 (376)
T KOG0669|consen 245 CGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFF 318 (376)
T ss_pred hccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhh
Confidence 110 000 11111000 00000 11111 145678889999999999999999877543
No 394
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-31 Score=276.28 Aligned_cols=257 Identities=28% Similarity=0.302 Sum_probs=196.4
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---------ccHHHHHHHHHHHHhcCCCceeeEeEEEEe-CC
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---------DGVKVFAAEMEILGKIRHRNILKLYACLLK-GG 744 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---------~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~ 744 (973)
.++|-..+.||+|+|++||+|.+....+.||||+-.-. .-.+...+|.+|-+.++||.||+++++|.- .+
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 45678889999999999999999988999999964321 123446789999999999999999999965 45
Q ss_pred eeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeec---CCCceEEe
Q 002063 745 SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD---EDYEPKIA 821 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~---~~~~~kl~ 821 (973)
..+-|+|||+|.+|.-|++.+ ..+++.+...|+.||+.||.||... +.+|||-|+||.|||+- .-|.+||+
T Consensus 542 sFCTVLEYceGNDLDFYLKQh-----klmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKIT 615 (775)
T KOG1151|consen 542 SFCTVLEYCEGNDLDFYLKQH-----KLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKIT 615 (775)
T ss_pred cceeeeeecCCCchhHHHHhh-----hhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEee
Confidence 678899999999999999875 3478889999999999999999865 78999999999999984 35789999
Q ss_pred cccCCccccCCCCccc-----ccccCcccccccccccccC----CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHH
Q 002063 822 DFGVAKIAENSPKVSD-----YSCFAGTHGYIAPELAYTC----KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIV 892 (973)
Q Consensus 822 Dfgl~~~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~----~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~ 892 (973)
|||+++.++....... .+-..||.+|++||.+--+ +.+.++||||+||++|.++.|+.||.-... -.++.
T Consensus 616 DFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqs-QQdIL 694 (775)
T KOG1151|consen 616 DFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQS-QQDIL 694 (775)
T ss_pred ecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchh-HHHHH
Confidence 9999998875543321 2235799999999987432 477899999999999999999999975411 11111
Q ss_pred HHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 002063 893 YWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVK 948 (973)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~ 948 (973)
+. ...+... ...+ ..-+....+...+|++|+++.-+.|.++.++..
T Consensus 695 qe-NTIlkAt-------EVqF--P~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 695 QE-NTILKAT-------EVQF--PPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred hh-hchhcce-------eccC--CCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 11 1111111 0111 111233445677899999999999988887753
No 395
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-30 Score=261.03 Aligned_cols=201 Identities=26% Similarity=0.420 Sum_probs=175.8
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec-----cccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-----GDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~-----~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 747 (973)
...+|+..++||+|+|++|.+++++++.+.+|+|++++ +++.+-.+.|..+.... +||.+|.+..+|+.+...+
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf 327 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF 327 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence 45688999999999999999999999999999999877 34455567787777766 7999999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
.|.||++||+|--.++++ ..++++...-+...|+-||.||| ++|||+||+|.+||+++..|++|++|+|+++
T Consensus 328 fvieyv~ggdlmfhmqrq-----rklpeeharfys~ei~lal~flh---~rgiiyrdlkldnvlldaeghikltdygmck 399 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEICLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCK 399 (593)
T ss_pred EEEEEecCcceeeehhhh-----hcCcHHHhhhhhHHHHHHHHHHh---hcCeeeeeccccceEEccCCceeecccchhh
Confidence 999999999997777653 35788888888999999999999 8999999999999999999999999999986
Q ss_pred cccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcc
Q 002063 828 IAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEE 884 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~ 884 (973)
.--. .....+.++||+.|.|||++++..|...+|+|++||+++||+.|+.||+--
T Consensus 400 e~l~--~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdiv 454 (593)
T KOG0695|consen 400 EGLG--PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIV 454 (593)
T ss_pred cCCC--CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCccee
Confidence 3221 122344578999999999999999999999999999999999999999753
No 396
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=1e-30 Score=245.53 Aligned_cols=202 Identities=27% Similarity=0.384 Sum_probs=168.8
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec---cccHHHHHHHHHHHHh-cCCCceeeEeEEEEeCCeeEEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK---GDGVKVFAAEMEILGK-IRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~---~~~~~~~~~E~~~l~~-l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
+....+..||+|++|.|=+.++..+|...|||.+.. .+..++..+|+.+..+ ..+|.+|.+++....+..+++.||
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME 125 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICME 125 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHH
Confidence 344566789999999999999999999999999876 3445566778887655 479999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
.| ..||..+-+.- ......+++...-+||..+.+||.|||+ +..++|||+||+|||++.+|++|+||||.+....+
T Consensus 126 ~M-~tSldkfy~~v-~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~d 201 (282)
T KOG0984|consen 126 LM-DTSLDKFYRKV-LKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGYLVD 201 (282)
T ss_pred Hh-hhhHHHHHHHH-HhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccceeehh
Confidence 99 56887776554 3345678899999999999999999997 67899999999999999999999999999987654
Q ss_pred CCCcccccccCcccccccccccc----cCCCCccchHHHHHHHHHHHHhCCCCCCcc
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAY----TCKVSEKSDVFSFGVVLLELVTGRKPVEEE 884 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~DvwslG~~l~ell~g~~pf~~~ 884 (973)
.- ..+...|-..|||||.+. .+.|+.++||||||+++.||.++++||+..
T Consensus 202 Si---Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 202 SI---AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred hh---HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence 32 222235678899999874 347899999999999999999999999754
No 397
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=6.2e-30 Score=299.33 Aligned_cols=266 Identities=18% Similarity=0.172 Sum_probs=172.5
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCC----CceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEE------EEeC
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKN----AGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYAC------LLKG 743 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~----~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~------~~~~ 743 (973)
..++|++.+.||+|+||+||+|++..+ +..||||++......+....| .++...+.++..++.. ...+
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~ 207 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNE--RVRRACPNSCADFVYGFLEPVSSKKE 207 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHH--HHHhhchhhHHHHHHhhhcccccccC
Confidence 456899999999999999999999988 899999987653322222221 1122222222222221 2346
Q ss_pred CeeEEEEEccCCCchHHHHHhhhcC---------------CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCC
Q 002063 744 GSSFLVLEYMPNGNLFQALHKRVKE---------------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSS 808 (973)
Q Consensus 744 ~~~~lv~e~~~~gsL~~~l~~~~~~---------------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~ 808 (973)
...++||||+++++|.+++...... .........+..++.|++.||+||| +++|+||||||+
T Consensus 208 ~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH---~~gIiHRDLKP~ 284 (566)
T PLN03225 208 DEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH---STGIVHRDVKPQ 284 (566)
T ss_pred CceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH---HCCEEeCcCCHH
Confidence 6789999999999999998753100 0001122345679999999999999 789999999999
Q ss_pred CeeecC-CCceEEecccCCccccCCCCcccccccCcccccccccccccC----------------------CCCccchHH
Q 002063 809 NILLDE-DYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTC----------------------KVSEKSDVF 865 (973)
Q Consensus 809 Nill~~-~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~~Dvw 865 (973)
|||++. ++.+||+|||+++....... .......+++.|+|||.+... .++.++|||
T Consensus 285 NILl~~~~~~~KL~DFGlA~~l~~~~~-~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVw 363 (566)
T PLN03225 285 NIIFSEGSGSFKIIDLGAAADLRVGIN-YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIY 363 (566)
T ss_pred HEEEeCCCCcEEEEeCCCccccccccc-cCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccH
Confidence 999986 57999999999986543322 122345689999999965322 234466999
Q ss_pred HHHHHHHHHHhCCCCCCcccC--------CCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCC
Q 002063 866 SFGVVLLELVTGRKPVEEEYG--------DGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLP 937 (973)
Q Consensus 866 slG~~l~ell~g~~pf~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP 937 (973)
|+||++|||+++..|++.... .+.+...|......... .+. ...+ +..........+|+.+|++.||
T Consensus 364 SlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~-~~~~--~~~d~~~~~~~dLi~~mL~~dP 438 (566)
T PLN03225 364 SAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRAS--PDL-RRGF--EVLDLDGGAGWELLKSMMRFKG 438 (566)
T ss_pred HHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccc--hhh-hhhh--hhccccchHHHHHHHHHccCCc
Confidence 999999999998776543200 01111112111100000 000 0000 0000112235689999999999
Q ss_pred CCCCCHHHHHHHh
Q 002063 938 NLRPPMREVVKML 950 (973)
Q Consensus 938 ~~Rpt~~evl~~L 950 (973)
++|||+.++++|-
T Consensus 439 ~kR~ta~e~L~Hp 451 (566)
T PLN03225 439 RQRISAKAALAHP 451 (566)
T ss_pred ccCCCHHHHhCCc
Confidence 9999999999873
No 398
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-31 Score=281.43 Aligned_cols=254 Identities=24% Similarity=0.328 Sum_probs=206.8
Q ss_pred HHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCee
Q 002063 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSS 746 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 746 (973)
...+.+++.+..||-|+||.|=+++.......+|+|.+++. ...+.+..|-.+|...+.|.||++|-.|.+..++
T Consensus 416 ~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyv 495 (732)
T KOG0614|consen 416 QVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYV 495 (732)
T ss_pred ccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhh
Confidence 34556778889999999999999999876666899988773 3445677899999999999999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
||.||-|-||.++..++.+ ..++.....-++..+.+|++||| +++||+||+||+|.+++.+|.+||.|||+|
T Consensus 496 YmLmEaClGGElWTiLrdR-----g~Fdd~tarF~~acv~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~KLVDFGFA 567 (732)
T KOG0614|consen 496 YMLMEACLGGELWTILRDR-----GSFDDYTARFYVACVLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLKLVDFGFA 567 (732)
T ss_pred hhhHHhhcCchhhhhhhhc-----CCcccchhhhhHHHHHHHHHHHH---hcCceeccCChhheeeccCCceEEeehhhH
Confidence 9999999999999999864 35666677778899999999999 899999999999999999999999999999
Q ss_pred ccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 827 KIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
+..+.+.. ...++||+.|.|||++..+..+.++|.||||+++||+++|.+||... +........++.-+
T Consensus 568 Kki~~g~K---TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~-----dpmktYn~ILkGid--- 636 (732)
T KOG0614|consen 568 KKIGSGRK---TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGV-----DPMKTYNLILKGID--- 636 (732)
T ss_pred HHhccCCc---eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCC-----chHHHHHHHHhhhh---
Confidence 98876643 44588999999999999999999999999999999999999999765 22222222222211
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHHhh
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPP-----MREVVKMLA 951 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-----~~evl~~L~ 951 (973)
..+.+....+...+++++....+|.+|.- +.||-+|-+
T Consensus 637 -------~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~W 679 (732)
T KOG0614|consen 637 -------KIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRW 679 (732)
T ss_pred -------hhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhh
Confidence 11223334445567777778899999975 777776644
No 399
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=7.7e-30 Score=274.64 Aligned_cols=203 Identities=26% Similarity=0.380 Sum_probs=174.4
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
.-|..++.||-|+||+|.++.-.++...||+|.+.+. ..+.....|-.||..-+.+-||+++..|.+++.+|+||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 3577889999999999999999988889999988774 34556788999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc-
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA- 829 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~- 829 (973)
+|++||++-.+|-+. ..+.+...+-++.++++|+++.| ..|+|||||||+|||||.+|++||+|||+++-+
T Consensus 709 dYIPGGDmMSLLIrm-----gIFeE~LARFYIAEltcAiesVH---kmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfR 780 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRM-----GIFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFR 780 (1034)
T ss_pred eccCCccHHHHHHHh-----ccCHHHHHHHHHHHHHHHHHHHH---hccceecccCccceEEccCCceeeeeccccccce
Confidence 999999999998764 34677777778899999999999 899999999999999999999999999998522
Q ss_pred --------cCCCCcc-------------------------------cccccCcccccccccccccCCCCccchHHHHHHH
Q 002063 830 --------ENSPKVS-------------------------------DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVV 870 (973)
Q Consensus 830 --------~~~~~~~-------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~ 870 (973)
+.+++.. .....+||..|+|||++....|+..+|+||.|||
T Consensus 781 WTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvi 860 (1034)
T KOG0608|consen 781 WTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVI 860 (1034)
T ss_pred eccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHH
Confidence 1111100 0012469999999999999999999999999999
Q ss_pred HHHHHhCCCCCCcccC
Q 002063 871 LLELVTGRKPVEEEYG 886 (973)
Q Consensus 871 l~ell~g~~pf~~~~~ 886 (973)
||||+.|+.||.....
T Consensus 861 l~em~~g~~pf~~~tp 876 (1034)
T KOG0608|consen 861 LYEMLVGQPPFLADTP 876 (1034)
T ss_pred HHHHhhCCCCccCCCC
Confidence 9999999999986543
No 400
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=2e-30 Score=290.02 Aligned_cols=247 Identities=26% Similarity=0.387 Sum_probs=188.6
Q ss_pred cccCeecccCcEE-EEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEEEEEccCCC
Q 002063 679 EEDNLIGSGGTGK-VYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLEYMPNG 756 (973)
Q Consensus 679 ~~~~~lG~G~~g~-Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~g 756 (973)
.-.+.+|.|+.|+ ||+|... ++.||||++-.+ -.+...+|++.++.- +|||||++++...++...||..|.| ..
T Consensus 512 ~~~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~e-~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC-~~ 587 (903)
T KOG1027|consen 512 SPKEILGYGSNGTVVFRGVYE--GREVAVKRLLEE-FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC-AC 587 (903)
T ss_pred ccHHHcccCCCCcEEEEEeeC--CceehHHHHhhH-hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-hh
Confidence 3346789999987 8999987 789999987543 244567999999888 6999999999999999999999999 56
Q ss_pred chHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC---C--CceEEecccCCccccC
Q 002063 757 NLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE---D--YEPKIADFGVAKIAEN 831 (973)
Q Consensus 757 sL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~---~--~~~kl~Dfgl~~~~~~ 831 (973)
+|.+++... ..............+..|++.|+++|| +.+||||||||.||||+. + .+++|+|||+++....
T Consensus 588 sL~dlie~~-~~d~~~~~~i~~~~~l~q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~ 663 (903)
T KOG1027|consen 588 SLQDLIESS-GLDVEMQSDIDPISVLSQIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAG 663 (903)
T ss_pred hHHHHHhcc-ccchhhcccccHHHHHHHHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeEEecccccccccCC
Confidence 999999863 111111111345677899999999999 789999999999999975 3 4699999999998875
Q ss_pred CCCc-ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhc
Q 002063 832 SPKV-SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 832 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
+... .......||-+|+|||++....-+.++||+|+||++|+.++ |.+||++.......+ +........
T Consensus 664 ~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NI-------l~~~~~L~~-- 734 (903)
T KOG1027|consen 664 GKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANI-------LTGNYTLVH-- 734 (903)
T ss_pred CcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhh-------hcCccceee--
Confidence 5433 23445679999999999998888889999999999999999 499998763221111 111111100
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
. +...++ ...++|.+|++++|..||++.+|+.|
T Consensus 735 ---L--~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 735 ---L--EPLPDC--EAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred ---e--ccCchH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 0 011111 56789999999999999999999865
No 401
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=5.1e-29 Score=264.21 Aligned_cols=238 Identities=32% Similarity=0.418 Sum_probs=192.5
Q ss_pred CcEEEEEEEEcCCCceEEEEEeecccc---HHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCCchHHHHHh
Q 002063 688 GTGKVYRLDLKKNAGTVAVKQLWKGDG---VKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNGNLFQALHK 764 (973)
Q Consensus 688 ~~g~Vy~a~~~~~~~~vavK~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 764 (973)
+||.||+|+...+++.||+|++..... .+.+.+|++.+++++|+|++++++++..+...+++|||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 589999999998899999999876433 67899999999999999999999999999999999999999999999875
Q ss_pred hhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcccccccCcc
Q 002063 765 RVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGT 844 (973)
Q Consensus 765 ~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt 844 (973)
. ..+++..+..++.+++.+++||| +.+++|+||+|+||+++.++.++++|||.+....... ......++
T Consensus 81 ~-----~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~ 149 (244)
T smart00220 81 R-----GRLSEDEARFYARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGT 149 (244)
T ss_pred c-----cCCCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCC
Confidence 3 12788999999999999999999 7899999999999999999999999999998765432 22234578
Q ss_pred cccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhhHHHHHH
Q 002063 845 HGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIK 924 (973)
Q Consensus 845 ~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (973)
..|+|||...+..++.++||||+|+++|++++|..||.... + ............... .........+
T Consensus 150 ~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~-~---~~~~~~~~~~~~~~~---------~~~~~~~~~~ 216 (244)
T smart00220 150 PEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDD-Q---LLELFKKIGKPKPPF---------PPPEWKISPE 216 (244)
T ss_pred cCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-c---HHHHHHHHhccCCCC---------ccccccCCHH
Confidence 89999999988889999999999999999999999996531 1 111111111100000 0000003456
Q ss_pred HHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 925 LLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 925 l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
+.+++.+|+..+|++||++.+++++
T Consensus 217 ~~~~i~~~l~~~p~~Rp~~~~~~~~ 241 (244)
T smart00220 217 AKDLIRKLLVKDPEKRLTAEEALQH 241 (244)
T ss_pred HHHHHHHHccCCchhccCHHHHhhC
Confidence 8899999999999999999999873
No 402
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=5.7e-31 Score=256.58 Aligned_cols=265 Identities=21% Similarity=0.262 Sum_probs=190.4
Q ss_pred CcccCeecccCcEEEEEEEEcCCCceEEEEEeec----cccHHHHHHHHHHHHhcCCCceeeEeEEEEeC-----CeeEE
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK----GDGVKVFAAEMEILGKIRHRNILKLYACLLKG-----GSSFL 748 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~~~l 748 (973)
.+-.+.||.|+||.||.+.+..+|+.||.|++.. -...+++-+|.+++..++|.|++..++..... .+.|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 3566889999999999999999999999998755 23556788999999999999999998887654 24688
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
|+|.|. .+|.+.+- +...++...+.-+.+||++||+||| +.+|.||||||.|.+++.+...||||||+++.
T Consensus 135 ~TELmQ-SDLHKIIV-----SPQ~Ls~DHvKVFlYQILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDFGLARv 205 (449)
T KOG0664|consen 135 LTELMQ-SDLHKIIV-----SPQALTPDHVKVFVYQILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDFGLART 205 (449)
T ss_pred HHHHHH-hhhhheec-----cCCCCCcchhhhhHHHHHhhhHHHh---hcchhhccCCCccEEeccCceEEecccccccc
Confidence 899884 46666553 2345677778889999999999999 88999999999999999999999999999986
Q ss_pred ccCCCCcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCC-----------ccHHHH--
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDG-----------KDIVYW-- 894 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~-----------~~~~~~-- 894 (973)
.+..+. ...+..+-|..|+|||++.|. .|+.++||||.||++.|++..+..|+....-. .+...+
T Consensus 206 ee~d~~-~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ 284 (449)
T KOG0664|consen 206 WDQRDR-LNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKY 284 (449)
T ss_pred cchhhh-hhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHH
Confidence 654332 233345568899999999865 58999999999999999999988886321000 000000
Q ss_pred ----HHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 895 ----VSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 895 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
.+..+.+.......+..-+.-......-.+-..+...++..||++|.+..+.+.++-.
T Consensus 285 ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~ 346 (449)
T KOG0664|consen 285 ACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYL 346 (449)
T ss_pred HhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccc
Confidence 0111111110000000000000011112234566778899999999999999887653
No 403
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=1.5e-28 Score=279.60 Aligned_cols=261 Identities=19% Similarity=0.175 Sum_probs=180.7
Q ss_pred hcCCcccCeecccCcEEEEEEEEc----------------CCCceEEEEEeeccc--cHH--------------HHHHHH
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLK----------------KNAGTVAVKQLWKGD--GVK--------------VFAAEM 722 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~----------------~~~~~vavK~~~~~~--~~~--------------~~~~E~ 722 (973)
.++|++.++||+|+||+||+|... ..++.||||++.... ..+ ....|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 568999999999999999999752 235679999986421 111 233467
Q ss_pred HHHHhcCCCce-----eeEeEEEEe--------CCeeEEEEEccCCCchHHHHHhhhcC-------------------CC
Q 002063 723 EILGKIRHRNI-----LKLYACLLK--------GGSSFLVLEYMPNGNLFQALHKRVKE-------------------GK 770 (973)
Q Consensus 723 ~~l~~l~hpni-----v~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~~~-------------------~~ 770 (973)
.++.+++|.++ ++++++|.. ++..++||||+++|+|.++++..... ..
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 77777766554 667777643 35689999999999999998742110 11
Q ss_pred CCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcccccccCcccccccc
Q 002063 771 PELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAP 850 (973)
Q Consensus 771 ~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aP 850 (973)
...++..+..++.|+++|++|+| +.+|+||||||+||+++.++.+||+|||++........ .......+++.|+||
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~-~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN-FNPLYGMLDPRYSPP 379 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCc-cCccccCCCcceeCh
Confidence 23567788899999999999999 78999999999999999999999999999975543221 111223457899999
Q ss_pred cccccCC--------------------C--CccchHHHHHHHHHHHHhCCC-CCCcccCC-------CccHHHHHHHhhc
Q 002063 851 ELAYTCK--------------------V--SEKSDVFSFGVVLLELVTGRK-PVEEEYGD-------GKDIVYWVSTHLN 900 (973)
Q Consensus 851 E~~~~~~--------------------~--~~~~DvwslG~~l~ell~g~~-pf~~~~~~-------~~~~~~~~~~~~~ 900 (973)
|.+.... + ..+.||||+||++|+|++|.. ||...... ..+...|.....
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~- 458 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKG- 458 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcc-
Confidence 9875322 1 134799999999999999875 77532111 111111211100
Q ss_pred ccccchhhccccccChhhHHHHHHHHHHHHHhcCCCC---CCCCCHHHHHHHh
Q 002063 901 NHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLP---NLRPPMREVVKML 950 (973)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP---~~Rpt~~evl~~L 950 (973)
................+++.+++..+| .+|+++.|+++|-
T Consensus 459 ----------~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp 501 (507)
T PLN03224 459 ----------QKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHR 501 (507)
T ss_pred ----------cCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCC
Confidence 001111122334567788889998766 6899999999874
No 404
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=2.9e-29 Score=239.07 Aligned_cols=262 Identities=19% Similarity=0.240 Sum_probs=197.4
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcC-CCceeeEeEEEEeC--CeeEEEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIR-HRNILKLYACLLKG--GSSFLVL 750 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~--~~~~lv~ 750 (973)
..++|++.+++|+|.|++||.|..-.+.+.++||++++ ...+.+.+|+++++.++ ||||++++++..++ ..+.+|+
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP-VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiF 114 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP-VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIF 114 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeech-HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHh
Confidence 45689999999999999999999988899999998764 44567899999999997 99999999998764 4578999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCC-CceEEecccCCccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED-YEPKIADFGVAKIA 829 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~Dfgl~~~~ 829 (973)
||+++.+....-. .++..++.-++.+++.||.|+| +.||+|||+||.|++++.. -..++.|+|+|.++
T Consensus 115 E~v~n~Dfk~ly~--------tl~d~dIryY~~elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFY 183 (338)
T KOG0668|consen 115 EYVNNTDFKQLYP--------TLTDYDIRYYIYELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 183 (338)
T ss_pred hhhccccHHHHhh--------hhchhhHHHHHHHHHHHHhHHH---hcCcccccCCcceeeechhhceeeeeecchHhhc
Confidence 9999877655443 3566778889999999999999 8999999999999999864 56999999999988
Q ss_pred cCCCCcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHH------------
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVS------------ 896 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~------------ 896 (973)
.++. .+...+.+..|.-||.+... .|+.+-|+|||||++..|++.+.||---.....+++..++
T Consensus 184 Hp~~---eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~ 260 (338)
T KOG0668|consen 184 HPGK---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLN 260 (338)
T ss_pred CCCc---eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHH
Confidence 6653 34456778889999998655 4778899999999999999999999533222222222210
Q ss_pred -Hhhcccccchhhcccc-------ccChhhHH-HHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 897 -THLNNHENVLKVLDCE-------VASESIKE-DMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 897 -~~~~~~~~~~~~~~~~-------~~~~~~~~-~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
-...-.+.+..++..- +....... ..++..+++.+.+.+|-++|+|++|.++|-
T Consensus 261 KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~Hp 323 (338)
T KOG0668|consen 261 KYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHP 323 (338)
T ss_pred HHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCc
Confidence 0111111111111100 00000011 124567888899999999999999998763
No 405
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=6.1e-29 Score=266.12 Aligned_cols=199 Identities=30% Similarity=0.435 Sum_probs=174.1
Q ss_pred HHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecccc-----H-----HHHHHHHHHHHhcC---CCceeeEeE
Q 002063 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDG-----V-----KVFAAEMEILGKIR---HRNILKLYA 738 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~-----~-----~~~~~E~~~l~~l~---hpniv~l~~ 738 (973)
...+.+|...+++|+|+||.|+.|.++++...|+||.+.++.. . ..+-.|++||..++ |+||+++++
T Consensus 557 ~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLd 636 (772)
T KOG1152|consen 557 YKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLD 636 (772)
T ss_pred ecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhh
Confidence 3456789999999999999999999999899999999887431 1 12456999999997 999999999
Q ss_pred EEEeCCeeEEEEEccCCC-chHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCc
Q 002063 739 CLLKGGSSFLVLEYMPNG-NLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE 817 (973)
Q Consensus 739 ~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 817 (973)
+|++++.+|++||-...| +|++++.. .+.+++.....|+.|++.|+++|| +.+|||||||-+||.++.+|-
T Consensus 637 fFEddd~yyl~te~hg~gIDLFd~IE~-----kp~m~E~eAk~IFkQV~agi~hlh---~~~ivhrdikdenvivd~~g~ 708 (772)
T KOG1152|consen 637 FFEDDDYYYLETEVHGEGIDLFDFIEF-----KPRMDEPEAKLIFKQVVAGIKHLH---DQGIVHRDIKDENVIVDSNGF 708 (772)
T ss_pred eeecCCeeEEEecCCCCCcchhhhhhc-----cCccchHHHHHHHHHHHhcccccc---ccCceecccccccEEEecCCe
Confidence 999999999999986544 89999975 356888999999999999999999 889999999999999999999
Q ss_pred eEEecccCCccccCCCCcccccccCcccccccccccccCCCC-ccchHHHHHHHHHHHHhCCCCCC
Q 002063 818 PKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVS-EKSDVFSFGVVLLELVTGRKPVE 882 (973)
Q Consensus 818 ~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~~l~ell~g~~pf~ 882 (973)
+|+.|||.+....++ ....++||.+|.|||++.|.+|- ..-|||++|++||.++....||.
T Consensus 709 ~klidfgsaa~~ksg----pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 709 VKLIDFGSAAYTKSG----PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred EEEeeccchhhhcCC----CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999999999766443 44568899999999999988875 56899999999999999988884
No 406
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=1.2e-28 Score=247.39 Aligned_cols=256 Identities=27% Similarity=0.308 Sum_probs=198.7
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCC------e
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGG------S 745 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~------~ 745 (973)
.+|.-...+|.|.. .|..|.+.-.++.||+|+...+ ...++..+|...+..+.|+||++++.+|...+ +
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 46777788999999 7778888888999999987553 34566789999999999999999999997543 5
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccC
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
.|+|||+| ..+|...+.. .++-..+..+.+|+++|++|+| +.+|+|||+||+||++..++.+||.|||+
T Consensus 96 ~y~v~e~m-~~nl~~vi~~-------elDH~tis~i~yq~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lKi~dfg~ 164 (369)
T KOG0665|consen 96 VYLVMELM-DANLCQVILM-------ELDHETISYILYQMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLKILDFGL 164 (369)
T ss_pred HHHHHHhh-hhHHHHHHHH-------hcchHHHHHHHHHHHHHHHHHH---hcceeecccCcccceecchhheeeccchh
Confidence 69999999 5689888873 3677788899999999999999 89999999999999999999999999999
Q ss_pred CccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHH----------
Q 002063 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWV---------- 895 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~---------- 895 (973)
|+..+.. ...+..+.|..|+|||++-+..+.+.+||||+||++.||++|+..|.+.. .+.+|.
T Consensus 165 ar~e~~~---~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d----~idQ~~ki~~~lgtpd 237 (369)
T KOG0665|consen 165 ARTEDTD---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKD----HIDQWNKIIEQLGTPD 237 (369)
T ss_pred hcccCcc---cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCch----HHHHHHHHHHHhcCCC
Confidence 9865443 34445678899999999998889999999999999999999999886431 112221
Q ss_pred -----------HHhhcccccchh------hccccccC--hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 896 -----------STHLNNHENVLK------VLDCEVAS--ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 896 -----------~~~~~~~~~~~~------~~~~~~~~--~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
+......+.+.. +.|..+.. +..+-......+++.+|+-.+|++|-+++++++|-
T Consensus 238 ~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HP 311 (369)
T KOG0665|consen 238 PSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHP 311 (369)
T ss_pred HHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCC
Confidence 111111111111 11111111 11222344567889999999999999999999884
No 407
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.95 E-value=2.9e-28 Score=257.59 Aligned_cols=279 Identities=21% Similarity=0.214 Sum_probs=213.5
Q ss_pred cccccccccCHHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc-cHHHHHHHHHHHHhcC------CCcee
Q 002063 662 LASFHHIDIDAEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-GVKVFAAEMEILGKIR------HRNIL 734 (973)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~------hpniv 734 (973)
...++.+.+++..-.+|.+....|+|-|++|..|.+...|..||||++...+ -.+.=.+|+++|+++. --|++
T Consensus 418 aEGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hcl 497 (752)
T KOG0670|consen 418 AEGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCL 497 (752)
T ss_pred ccceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHH
Confidence 4567777888888889999999999999999999999889999999998743 4455578999999995 24899
Q ss_pred eEeEEEEeCCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC
Q 002063 735 KLYACLLKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE 814 (973)
Q Consensus 735 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~ 814 (973)
+++-.|....+.|||+|-+ .-+|.+.++..+. ...+....+..++.|+.-||..|- ..+|+|.||||+||||.+
T Consensus 498 rl~r~F~hknHLClVFE~L-slNLRevLKKyG~--nvGL~ikaVRsYaqQLflALklLK---~c~vlHaDIKPDNiLVNE 571 (752)
T KOG0670|consen 498 RLFRHFKHKNHLCLVFEPL-SLNLREVLKKYGR--NVGLHIKAVRSYAQQLFLALKLLK---KCGVLHADIKPDNILVNE 571 (752)
T ss_pred HHHHHhhhcceeEEEehhh-hchHHHHHHHhCc--ccceeehHHHHHHHHHHHHHHHHH---hcCeeecccCccceEecc
Confidence 9999999999999999998 5699999998643 445777888999999999999999 779999999999999987
Q ss_pred C-CceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCC------
Q 002063 815 D-YEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGD------ 887 (973)
Q Consensus 815 ~-~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~------ 887 (973)
. ..+||||||.|.......-+. ..-+..|+|||++.|..|+...|+||+||+|||+.||+..|.+....
T Consensus 572 ~k~iLKLCDfGSA~~~~eneitP----YLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~ 647 (752)
T KOG0670|consen 572 SKNILKLCDFGSASFASENEITP----YLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLF 647 (752)
T ss_pred CcceeeeccCccccccccccccH----HHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHH
Confidence 5 468999999998765442211 22356799999999999999999999999999999999999653211
Q ss_pred ----CccHHHHHHHhhcccccc---------------------------------hhhccccccChhhHHHHHHHHHHHH
Q 002063 888 ----GKDIVYWVSTHLNNHENV---------------------------------LKVLDCEVASESIKEDMIKLLKIAV 930 (973)
Q Consensus 888 ----~~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~~~~~l~~l~~ 930 (973)
+.-...++.........+ ..+......+.........|.+|+.
T Consensus 648 me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLd 727 (752)
T KOG0670|consen 648 MELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLD 727 (752)
T ss_pred HHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHH
Confidence 000011111100000000 0000011112223445667899999
Q ss_pred HhcCCCCCCCCCHHHHHHHh
Q 002063 931 VCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 931 ~cl~~dP~~Rpt~~evl~~L 950 (973)
+|+..||++|.|..++++|-
T Consensus 728 kml~LdP~KRit~nqAL~Hp 747 (752)
T KOG0670|consen 728 KMLILDPEKRITVNQALKHP 747 (752)
T ss_pred HHhccChhhcCCHHHHhcCC
Confidence 99999999999999999874
No 408
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=2.6e-26 Score=237.50 Aligned_cols=210 Identities=38% Similarity=0.575 Sum_probs=184.6
Q ss_pred ecccCcEEEEEEEEcCCCceEEEEEeecccc---HHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCCchHH
Q 002063 684 IGSGGTGKVYRLDLKKNAGTVAVKQLWKGDG---VKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNGNLFQ 760 (973)
Q Consensus 684 lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL~~ 760 (973)
||+|.+|.||+++...+++.+++|++..... .+.+.+|++.++.++|++++++++++......+++|||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999998899999999877544 4789999999999999999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC-CCceEEecccCCccccCCCCccccc
Q 002063 761 ALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE-DYEPKIADFGVAKIAENSPKVSDYS 839 (973)
Q Consensus 761 ~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~Dfgl~~~~~~~~~~~~~~ 839 (973)
++... ...+++..+..++.+++++++++| +.+++|+||+|.||+++. ++.++++|||.+........ ...
T Consensus 81 ~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~ 151 (215)
T cd00180 81 LLKEN----EGKLSEDEILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLK 151 (215)
T ss_pred HHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhh
Confidence 98753 145788999999999999999999 779999999999999999 89999999999976644321 122
Q ss_pred ccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhh
Q 002063 840 CFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESI 918 (973)
Q Consensus 840 ~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (973)
...+...|++||..... .++.++|+|++|++++++
T Consensus 152 ~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------------- 187 (215)
T cd00180 152 TIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------------- 187 (215)
T ss_pred cccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------------------
Confidence 34577899999998877 788999999999999998
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 919 KEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 919 ~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
..+.+++.+|++.+|++||++.++++++
T Consensus 188 ----~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ----PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ----HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 4578899999999999999999998764
No 409
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.94 E-value=2.6e-27 Score=247.29 Aligned_cols=265 Identities=25% Similarity=0.357 Sum_probs=202.0
Q ss_pred hcCCcccCeecccCcEEEEEEEEcC---CCceEEEEEeeccccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKK---NAGTVAVKQLWKGDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~---~~~~vavK~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~ 750 (973)
...|..+++||+|.|++||+|.+.. .++.||+|.+.......++.+|++++..+ -+.||+++.+++..++.+.+|+
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivl 114 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVL 114 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEe
Confidence 3567889999999999999999987 68899999999888888999999999999 5899999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC-CCceEEecccCCccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE-DYEPKIADFGVAKIA 829 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~Dfgl~~~~ 829 (973)
||+++....++... ++...+..+.+.+..||+++| ..|||||||||.|++.+. .+.-.|.|||+|...
T Consensus 115 p~~~H~~f~~l~~~--------l~~~~i~~Yl~~ll~Al~~~h---~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~ 183 (418)
T KOG1167|consen 115 PYFEHDRFRDLYRS--------LSLAEIRWYLRNLLKALAHLH---KNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRY 183 (418)
T ss_pred cccCccCHHHHHhc--------CCHHHHHHHHHHHHHHhhhhh---ccCccccCCCccccccccccCCceEEechhHHHH
Confidence 99999988888763 567788899999999999999 899999999999999985 567899999999722
Q ss_pred cCCC-------------C-----------------------------cccccccCcccccccccccccC-CCCccchHHH
Q 002063 830 ENSP-------------K-----------------------------VSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFS 866 (973)
Q Consensus 830 ~~~~-------------~-----------------------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws 866 (973)
+... . ........||++|+|||++... ..++++||||
T Consensus 184 d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws 263 (418)
T KOG1167|consen 184 DGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWS 263 (418)
T ss_pred HhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceee
Confidence 1100 0 0001124699999999998755 4678999999
Q ss_pred HHHHHHHHHhCCCCCCcccCCCccHHHHH-----------HH---h--hccccc---chh------hc-----cc----c
Q 002063 867 FGVVLLELVTGRKPVEEEYGDGKDIVYWV-----------ST---H--LNNHEN---VLK------VL-----DC----E 912 (973)
Q Consensus 867 lG~~l~ell~g~~pf~~~~~~~~~~~~~~-----------~~---~--~~~~~~---~~~------~~-----~~----~ 912 (973)
.||++.-++++++||-....+...+.+.+ +. . +..... ..+ -+ .. .
T Consensus 264 ~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n 343 (418)
T KOG1167|consen 264 AGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPN 343 (418)
T ss_pred ccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccc
Confidence 99999999999999976544433332221 00 0 000000 000 00 00 0
Q ss_pred ccChhhHHHH-HHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 913 VASESIKEDM-IKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 913 ~~~~~~~~~~-~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.......+.. ..+++++.+|+..+|.+|.|++|.++|-
T Consensus 344 ~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHp 382 (418)
T KOG1167|consen 344 TEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHP 382 (418)
T ss_pred eeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCc
Confidence 1111122222 3678999999999999999999998763
No 410
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=2.3e-27 Score=231.89 Aligned_cols=249 Identities=20% Similarity=0.302 Sum_probs=190.4
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhc-CCCceeeEeEE-EEeCCeeEEEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKI-RHRNILKLYAC-LLKGGSSFLVLE 751 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l-~hpniv~l~~~-~~~~~~~~lv~e 751 (973)
.+.|++.+.+|+|.||.+-+++++.+.+.+|+|-+..+ ...++|.+|...--.+ .|.||+.-+++ |+..+.++.++|
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE 102 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE 102 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence 45789999999999999999999999999999987764 4567788888775555 58999988774 566778889999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeec--CCCceEEecccCCccc
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD--EDYEPKIADFGVAKIA 829 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~--~~~~~kl~Dfgl~~~~ 829 (973)
|++.|+|..-+.. ..+-+....+++.|+++|+.|+| +.++||||||.+||||- +..++|+||||..+..
T Consensus 103 ~aP~gdL~snv~~------~GigE~~~K~v~~ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~ 173 (378)
T KOG1345|consen 103 FAPRGDLRSNVEA------AGIGEANTKKVFAQLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKV 173 (378)
T ss_pred cCccchhhhhcCc------ccccHHHHHHHHHHHHHHHHHhh---ccchhhcccccceEEEecCCccEEEeeeccccccc
Confidence 9999999877653 24567777899999999999999 88999999999999984 3457999999998765
Q ss_pred cCCCCcccccccCcccccccccccccC-----CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccccc
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYTC-----KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
+..-. ...-+..|.|||+.... ...+.+|||.||+++|.++||..||+.....+.....|..+.......
T Consensus 174 g~tV~-----~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~ 248 (378)
T KOG1345|consen 174 GTTVK-----YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPA 248 (378)
T ss_pred Cceeh-----hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCcc
Confidence 43221 12235679999986432 356789999999999999999999986544555555555554433332
Q ss_pred chhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHH
Q 002063 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREV 946 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~ev 946 (973)
. +.......++..++..+-+.++|++|=...++
T Consensus 249 ~---------P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~ 281 (378)
T KOG1345|consen 249 L---------PKKFNPFSEKALRLFKKSLTPRFKDRCKIWTA 281 (378)
T ss_pred C---------chhhcccCHHHHHHHHHhcCCcccccchhHHH
Confidence 2 12233345567778888899999999433333
No 411
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.93 E-value=1.3e-27 Score=260.36 Aligned_cols=252 Identities=26% Similarity=0.361 Sum_probs=201.3
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec--cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK--GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.+|+....+|.|.||.||||+++.+++..|||+++- ..+.+.++.|+-+++..+||||+.+++.+...+..++.||||
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEyc 94 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYC 94 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEec
Confidence 478899999999999999999999999999998765 567778889999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
.+|+|++.-+ ....+++.++..+.....+|++|+| +.+-+|||||-.||++++.|.+|++|||.+..+...
T Consensus 95 gggslQdiy~-----~TgplselqiayvcRetl~gl~ylh---s~gk~hRdiKGanilltd~gDvklaDfgvsaqitat- 165 (829)
T KOG0576|consen 95 GGGSLQDIYH-----VTGPLSELQIAYVCRETLQGLKYLH---SQGKIHRDIKGANILLTDEGDVKLADFGVSAQITAT- 165 (829)
T ss_pred CCCcccceee-----ecccchhHHHHHHHhhhhccchhhh---cCCcccccccccceeecccCceeecccCchhhhhhh-
Confidence 9999988654 3456788888888999999999999 889999999999999999999999999998765432
Q ss_pred CcccccccCccccccccccc---ccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcc
Q 002063 834 KVSDYSCFAGTHGYIAPELA---YTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
......+.||+.|||||+. +.+.|...+|||++|+...|+-.-+.|.-+. ..+....+-... .++
T Consensus 166 -i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdl-------hpmr~l~LmTkS----~~q 233 (829)
T KOG0576|consen 166 -IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDL-------HPMRALFLMTKS----GFQ 233 (829)
T ss_pred -hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCccccc-------chHHHHHHhhcc----CCC
Confidence 2334457899999999986 4567889999999999999998877665322 111111110000 011
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
+ ...+......+.+.+|++.|+.++|.+||++..+++|
T Consensus 234 p-p~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 234 P-PTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred C-CcccCCccchHHHHHHHHHHhcCCCccCCChhhheec
Confidence 1 1112223445668889999999999999999877653
No 412
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.93 E-value=9.3e-28 Score=246.68 Aligned_cols=417 Identities=20% Similarity=0.234 Sum_probs=297.6
Q ss_pred eeeCC---------CCCceEEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecC-CcccC
Q 002063 66 ITCDS---------VTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTG-NAMVG 135 (973)
Q Consensus 66 v~C~~---------~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~-n~l~~ 135 (973)
|+|+. .+...+.|+|..|+|+...+.+++.+++|++||||+|+|+.+-|++|..+.+|..|-+-+ |+|+.
T Consensus 51 VdCr~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~ 130 (498)
T KOG4237|consen 51 VDCRGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITD 130 (498)
T ss_pred EEccCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhh
Confidence 77864 235789999999999976677899999999999999999999999999999998887777 99999
Q ss_pred CCCC-cCCCCCCCEEeccCcccCCccccccccccccceEEccCCcCCCCCCcc-cccCCCCCCEEEcccccCC-------
Q 002063 136 SVPD-LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPE-SIGNLKNLTYLFLAHCNLR------- 206 (973)
Q Consensus 136 ~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~-~~~~l~~L~~L~L~~n~l~------- 206 (973)
.+.. |++|..|+.|.+.-|++.-.....|..+++|..|.+.+|.+.. ++. .+..+..++.+.+..|.+.
T Consensus 131 l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~--i~~~tf~~l~~i~tlhlA~np~icdCnL~w 208 (498)
T KOG4237|consen 131 LPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQS--ICKGTFQGLAAIKTLHLAQNPFICDCNLPW 208 (498)
T ss_pred hhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhh--hccccccchhccchHhhhcCccccccccch
Confidence 8875 9999999999999999998899999999999999999998863 455 7888999999999988832
Q ss_pred -----CCCChhhhccCCCCeeeccccccccccchhhhc-cccccEEEeecccCCCCCC-ccccccccccEEEeecccccc
Q 002063 207 -----GRIPESISELRELGTLDICRNKISGEFPRSIRK-LQKLWKIELYANNLTGELP-AELGNLTLLQEFDISSNQMYG 279 (973)
Q Consensus 207 -----~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~-l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~Ls~N~l~~ 279 (973)
-..|..++...-..-..+.++++....+..|.. +..+..-..+.+...+..| ..|..+++|+.|+|++|++++
T Consensus 209 la~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~ 288 (498)
T KOG4237|consen 209 LADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITR 288 (498)
T ss_pred hhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccch
Confidence 233444555555555666666666554444432 2333332333444444555 468999999999999999999
Q ss_pred ccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCcccccccccccccccccccccc-CChhhh
Q 002063 280 KLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGS-FPKYLC 358 (973)
Q Consensus 280 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~-~p~~~~ 358 (973)
+-+.+|..+..++.|.|..|+|...-...|.++..|++|+|++|+|+...|..|..+..|.+|.|-.|.+.-. --.|+.
T Consensus 289 i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~ 368 (498)
T KOG4237|consen 289 IEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLG 368 (498)
T ss_pred hhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHH
Confidence 9999999999999999999999977777899999999999999999999999999999999999999988611 112332
Q ss_pred hhhhHHHHHhhhccCCCCCCCcccCccccceEeccccccccc---CCccccCCCCcceEeccCCcCCCCCCCccCCCCCC
Q 002063 359 EKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGK---IPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSL 435 (973)
Q Consensus 359 ~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L 435 (973)
.+ +- .+...|..|- +....++.+.++++.+... .|+.....+ .+.-|+ ..+-+
T Consensus 369 ~W------lr-~~~~~~~~~C--q~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~------------s~~cP~---~c~c~ 424 (498)
T KOG4237|consen 369 EW------LR-KKSVVGNPRC--QSPGFVRQIPISDVAFGDFRCGGPEELGCLT------------SSPCPP---PCTCL 424 (498)
T ss_pred HH------Hh-hCCCCCCCCC--CCCchhccccchhccccccccCCccccCCCC------------CCCCCC---Ccchh
Confidence 22 22 2223333332 2234567777777766421 222211110 000111 11112
Q ss_pred CEE-EcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhccc
Q 002063 436 SQL-VLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLAR 514 (973)
Q Consensus 436 ~~L-~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 514 (973)
.+. .-|++.+. .+|..+ -..-.+|++.+|.++ .+|.. .+.+| .+|||+|++...--..|.++++|..|-||+
T Consensus 425 ~tVvRcSnk~lk-~lp~~i--P~d~telyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsy 497 (498)
T KOG4237|consen 425 DTVVRCSNKLLK-LLPRGI--PVDVTELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSY 497 (498)
T ss_pred hhhHhhcccchh-hcCCCC--CchhHHHhcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEec
Confidence 221 23333333 344322 124566777777777 55655 55666 777888877766666777777777777776
Q ss_pred c
Q 002063 515 N 515 (973)
Q Consensus 515 N 515 (973)
|
T Consensus 498 n 498 (498)
T KOG4237|consen 498 N 498 (498)
T ss_pred C
Confidence 5
No 413
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=7.6e-25 Score=229.31 Aligned_cols=198 Identities=36% Similarity=0.486 Sum_probs=171.5
Q ss_pred CcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc---cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccC
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
|++.+.||.|++|+||+|....+++.+|+|.+.... ..+.+.+|++.+++++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 567789999999999999999888999999987643 46788899999999999999999999999999999999999
Q ss_pred CCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCC
Q 002063 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~ 834 (973)
+++|.+++.... ..+++..+..++.+++.++.++| +.+++|+|++|.||+++.++.++++|||.+........
T Consensus 81 ~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~ 153 (225)
T smart00221 81 GGDLFDYLRKKG----GKLSEEEARFYLRQILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA 153 (225)
T ss_pred CCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc
Confidence 999999997541 11788899999999999999999 77999999999999999999999999999887654321
Q ss_pred cccccccCccccccccccc-ccCCCCccchHHHHHHHHHHHHhCCCCCCc
Q 002063 835 VSDYSCFAGTHGYIAPELA-YTCKVSEKSDVFSFGVVLLELVTGRKPVEE 883 (973)
Q Consensus 835 ~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~~l~ell~g~~pf~~ 883 (973)
.......++..|++||.. ....++.++|||++|+++|||++|+.||..
T Consensus 154 -~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 154 -ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred -ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 122234577889999998 666778899999999999999999999954
No 414
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=9.6e-24 Score=268.30 Aligned_cols=363 Identities=18% Similarity=0.214 Sum_probs=187.0
Q ss_pred CCceEEEeecCCCCCcc--ccccccCCCCCcEEeCCCCc------ccCccCccccCCC-CCcEEEecCCcccCCCCCcCC
Q 002063 72 TGRVTEISFDNKSLSGE--ISSSISALQSLTVLSLPFNV------LSGKLPLELSNCS-NLKVLNVTGNAMVGSVPDLSA 142 (973)
Q Consensus 72 ~~~v~~l~l~~~~l~~~--~~~~l~~l~~L~~L~Ls~n~------l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~~~l~~ 142 (973)
+.+|..+.+.-..+... -+..+..+++|+.|.+..+. +...+|..|..++ +|+.|++.++.+...|..+ .
T Consensus 531 ~~~v~~i~l~~~~~~~~~i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~~lP~~f-~ 609 (1153)
T PLN03210 531 TKKVLGITLDIDEIDELHIHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCMPSNF-R 609 (1153)
T ss_pred cceeeEEEeccCccceeeecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCCCCCCcC-C
Confidence 34666666654444321 12346666667766665442 2234555555543 4666666666655555444 3
Q ss_pred CCCCCEEeccCcccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCee
Q 002063 143 LKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTL 222 (973)
Q Consensus 143 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 222 (973)
..+|+.|++++|.+. . +|..+..+++|+.|+|++|...+.+|. ++.+++|++|
T Consensus 610 ~~~L~~L~L~~s~l~-~-------------------------L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L 662 (1153)
T PLN03210 610 PENLVKLQMQGSKLE-K-------------------------LWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETL 662 (1153)
T ss_pred ccCCcEEECcCcccc-c-------------------------cccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEE
Confidence 455555555555544 2 344445555555555555443334442 4555555555
Q ss_pred eccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCC
Q 002063 223 DICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFS 302 (973)
Q Consensus 223 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 302 (973)
+|++|.....+|..++++++|+.|++++|..-..+|..+ ++++|+.|++++|...+.+|.. ..+|+.|++++|.+.
T Consensus 663 ~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~ 738 (1153)
T PLN03210 663 KLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE 738 (1153)
T ss_pred EecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc
Confidence 555554444555555555555555555543333444433 4556666666655443334432 234555555555544
Q ss_pred CCCCCCcCCccccceeeccccccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCccc
Q 002063 303 GEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYA 382 (973)
Q Consensus 303 ~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~ 382 (973)
.+|..+ .+++|+.|.+.++.. . .++. .+....+..+.
T Consensus 739 -~lP~~~-~l~~L~~L~l~~~~~------------------------~-~l~~----------------~~~~l~~~~~~ 775 (1153)
T PLN03210 739 -EFPSNL-RLENLDELILCEMKS------------------------E-KLWE----------------RVQPLTPLMTM 775 (1153)
T ss_pred -cccccc-cccccccccccccch------------------------h-hccc----------------cccccchhhhh
Confidence 233322 233333333332211 1 0000 00000111112
Q ss_pred CccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEE
Q 002063 383 DCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERL 462 (973)
Q Consensus 383 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 462 (973)
.+++|+.|+|++|...+.+|..+.++++|+.|++++|...+.+|... .+++|+.|+|++|..-..+|.. ..+|+.|
T Consensus 776 ~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L 851 (1153)
T PLN03210 776 LSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDL 851 (1153)
T ss_pred ccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEe
Confidence 23456666666665555566666666666666666654333333332 4566667777665444344432 3467777
Q ss_pred ecCCCcCCCCccccccccccCCEEEccCc-ccccCCCccccCccccchhhcccc
Q 002063 463 ILTNNNFSGKIPSALGALRQLSSLHLEEN-ALTGSIPNEMGDCARIVDLNLARN 515 (973)
Q Consensus 463 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~N 515 (973)
+|++|.++ .+|..+..+++|+.|+|++| +++ .+|..+..+++|+.+++++|
T Consensus 852 ~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 852 NLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDC 903 (1153)
T ss_pred ECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCC
Confidence 77777776 56667777777777777764 444 45666667777777776666
No 415
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=4.5e-24 Score=271.32 Aligned_cols=346 Identities=24% Similarity=0.368 Sum_probs=204.5
Q ss_pred ccccccccccceEEccCCcCCC-----CCCcccccCCC-CCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccc
Q 002063 161 PRWVVNLTQLVSLSIGDNVYDE-----AEIPESIGNLK-NLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFP 234 (973)
Q Consensus 161 ~~~~~~l~~L~~L~l~~n~l~~-----~~ip~~~~~l~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p 234 (973)
+.+|.++++|+.|.+..+.... ..+|+.+..++ +|+.|.+.++.+. .+|..+ ...+|++|+|++|++. .++
T Consensus 551 ~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~ 627 (1153)
T PLN03210 551 ENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLW 627 (1153)
T ss_pred HHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccc
Confidence 3445566666666665443211 23455555543 4677777666665 455555 3566677777777665 456
Q ss_pred hhhhccccccEEEeecccCCCCCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccc
Q 002063 235 RSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRK 314 (973)
Q Consensus 235 ~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 314 (973)
..+..+++|+.|+|++|.....+| .+..+++|+.|+|++|.....+|..++++++|+.|++++|...+.+|..+ ++++
T Consensus 628 ~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~s 705 (1153)
T PLN03210 628 DGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKS 705 (1153)
T ss_pred cccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCC
Confidence 666666667777766654333454 35666667777776665545666666666666666666654444555443 4566
Q ss_pred cceeeccccccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEeccc
Q 002063 315 LFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISD 394 (973)
Q Consensus 315 L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~ 394 (973)
|+.|++++|.....+|.. ..+|+.|+|++|.+. .+|. .+ .+++|++|++.+
T Consensus 706 L~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~------------------------~~-~l~~L~~L~l~~ 756 (1153)
T PLN03210 706 LYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPS------------------------NL-RLENLDELILCE 756 (1153)
T ss_pred CCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccc------------------------cc-cccccccccccc
Confidence 666666665443344432 234555555555554 2221 11 234445555444
Q ss_pred ccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCcc
Q 002063 395 NHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIP 474 (973)
Q Consensus 395 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 474 (973)
+... .+.. .+....+..+..+++|+.|+|++|...+.+|..++++++|+.|+|++|...+.+|
T Consensus 757 ~~~~-~l~~----------------~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP 819 (1153)
T PLN03210 757 MKSE-KLWE----------------RVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLP 819 (1153)
T ss_pred cchh-hccc----------------cccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeC
Confidence 3221 1111 1111111122334677888888877666778888888888888888765444666
Q ss_pred ccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCC-CccCCCCCchhhccc
Q 002063 475 SALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSG-NKLTGSIPDNLMKLK 553 (973)
Q Consensus 475 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~ 553 (973)
..+ ++++|+.|+|++|.....+|.. ..+|+.|+|++|.|+ .+|.++..+++|+.|+|++ |+|. .+|..+..++
T Consensus 820 ~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~ 893 (1153)
T PLN03210 820 TGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLK 893 (1153)
T ss_pred CCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCccccccc
Confidence 555 6778888888877544444443 356777888888887 6777788888888888877 4555 5666666665
Q ss_pred -CceEEccCCc
Q 002063 554 -LSSIDLSENQ 563 (973)
Q Consensus 554 -L~~l~ls~N~ 563 (973)
|+.++++++.
T Consensus 894 ~L~~L~l~~C~ 904 (1153)
T PLN03210 894 HLETVDFSDCG 904 (1153)
T ss_pred CCCeeecCCCc
Confidence 7777777664
No 416
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.90 E-value=2.5e-24 Score=266.04 Aligned_cols=199 Identities=20% Similarity=0.207 Sum_probs=140.4
Q ss_pred hcCC-CceeeEeEEEE-------eCCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCC
Q 002063 727 KIRH-RNILKLYACLL-------KGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSP 798 (973)
Q Consensus 727 ~l~h-pniv~l~~~~~-------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~ 798 (973)
.++| +||++++++|. ..+..+.++||+ +++|++++... ...+++..+..++.||++||+||| ++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH---~~ 99 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP----DRSVDAFECFHVFRQIVEIVNAAH---SQ 99 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc----cccccHHHHHHHHHHHHHHHHHHH---hC
Confidence 4455 57888888772 234567889988 66999999742 345889999999999999999999 88
Q ss_pred CeEecCCCCCCeeecC-------------------CCceEEecccCCccccCCCC--------------cccccccCccc
Q 002063 799 PIIHRDIKSSNILLDE-------------------DYEPKIADFGVAKIAENSPK--------------VSDYSCFAGTH 845 (973)
Q Consensus 799 ~ivH~Dlkp~Nill~~-------------------~~~~kl~Dfgl~~~~~~~~~--------------~~~~~~~~gt~ 845 (973)
+|+||||||+|||++. ++.+|++|||+++....... ........||+
T Consensus 100 gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 179 (793)
T PLN00181 100 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMS 179 (793)
T ss_pred CeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCc
Confidence 9999999999999965 34566666666653211000 00011235788
Q ss_pred ccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHH
Q 002063 846 GYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKL 925 (973)
Q Consensus 846 ~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 925 (973)
.|||||++.+..++.++|||||||++|||++|..|+..... ....... ....+ .......+.
T Consensus 180 ~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~---~~~~~~~----------~~~~~-----~~~~~~~~~ 241 (793)
T PLN00181 180 WYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR---TMSSLRH----------RVLPP-----QILLNWPKE 241 (793)
T ss_pred ceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH---HHHHHHH----------hhcCh-----hhhhcCHHH
Confidence 99999999999999999999999999999999888753210 0000000 00000 001112335
Q ss_pred HHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 926 LKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 926 ~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
..++.+||+++|.+||++.|++++-.
T Consensus 242 ~~~~~~~L~~~P~~Rps~~eil~h~~ 267 (793)
T PLN00181 242 ASFCLWLLHPEPSCRPSMSELLQSEF 267 (793)
T ss_pred HHHHHHhCCCChhhCcChHHHhhchh
Confidence 57788999999999999999998654
No 417
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.90 E-value=1.3e-25 Score=230.96 Aligned_cols=405 Identities=19% Similarity=0.289 Sum_probs=199.0
Q ss_pred ccCccccCCCCCcEEEecCCcccCCCCC-cCCCCCCCEEeccCcccCCccccccccccccceEEccC-CcCCCCCCcc-c
Q 002063 112 KLPLELSNCSNLKVLNVTGNAMVGSVPD-LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGD-NVYDEAEIPE-S 188 (973)
Q Consensus 112 ~~p~~l~~l~~L~~L~L~~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~-n~l~~~~ip~-~ 188 (973)
++|..+. ..-..++|..|+|+.+|+. |+.+++|+.||||.|+|+.+.|.+|.+|.+|.+|-+.+ |+|++ +|. .
T Consensus 60 eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~--l~k~~ 135 (498)
T KOG4237|consen 60 EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITD--LPKGA 135 (498)
T ss_pred cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhh--hhhhH
Confidence 4554432 2456677777777777763 77777777777777777777777777777766665544 66653 333 4
Q ss_pred ccCCCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccch-hhhccccccEEEeecccCC------------C
Q 002063 189 IGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPR-SIRKLQKLWKIELYANNLT------------G 255 (973)
Q Consensus 189 ~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~-~l~~l~~L~~L~L~~n~l~------------~ 255 (973)
|++|..|+.|.+.-|++.-...+.|..|++|..|.+.+|.+. .++. .|..+..++.+++..|.+- -
T Consensus 136 F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a 214 (498)
T KOG4237|consen 136 FGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLA 214 (498)
T ss_pred hhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCccccccccchhhhHHh
Confidence 566666666666666666666666666666666666666666 3333 5666666666666666522 0
Q ss_pred CCCccccccccccEEEeeccccccccCCccCC-CCCccEEEcccCCCCCCCCC-CcCCccccceeeccccccCCCCCccc
Q 002063 256 ELPAELGNLTLLQEFDISSNQMYGKLPEEIGN-LKNLTVFQCFKNNFSGEFPS-GFGDMRKLFAFSIYGNRFSGPFPENL 333 (973)
Q Consensus 256 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~~~~l 333 (973)
..|-.++...-..-..+.++++....+..+.. +..+..-..+.+...++.|. .|..+++|+.|+|++|+|+++-+.+|
T Consensus 215 ~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aF 294 (498)
T KOG4237|consen 215 MNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAF 294 (498)
T ss_pred hchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhh
Confidence 11112222222222223333332222222111 11111111122222223332 34555555555555555555555555
Q ss_pred cccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccCCCCcce
Q 002063 334 GRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGM 413 (973)
Q Consensus 334 ~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 413 (973)
..+..++.|.|..|+|.. .-...|.++..|+.|+|.+|+|+..-|.+|..+..|..
T Consensus 295 e~~a~l~eL~L~~N~l~~------------------------v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~ 350 (498)
T KOG4237|consen 295 EGAAELQELYLTRNKLEF------------------------VSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLST 350 (498)
T ss_pred cchhhhhhhhcCcchHHH------------------------HHHHhhhccccceeeeecCCeeEEEecccccccceeee
Confidence 555555555555555441 11123455566666666666666666666666666666
Q ss_pred EeccCCcCCCCCCCccCCCCCCCEE--EcccCCCCCCCChhhhcCCCCCEEecCCCcCCCC---cccccc---------c
Q 002063 414 LDFGDNDFTGGISPLIGLSTSLSQL--VLQNNRFSGELPSELGRLTNLERLILTNNNFSGK---IPSALG---------A 479 (973)
Q Consensus 414 L~L~~N~l~~~~~~~~~~~~~L~~L--~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~---~p~~~~---------~ 479 (973)
|+|-.|.+.-. + .|..| .|..+.-.|. |.. +.-..++.+.++.+.+... .|+..+ .
T Consensus 351 l~l~~Np~~Cn-------C-~l~wl~~Wlr~~~~~~~-~~C-q~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~ 420 (498)
T KOG4237|consen 351 LNLLSNPFNCN-------C-RLAWLGEWLRKKSVVGN-PRC-QSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPP 420 (498)
T ss_pred eehccCcccCc-------c-chHHHHHHHhhCCCCCC-CCC-CCCchhccccchhccccccccCCccccCCCCCCCCCCC
Confidence 66655544210 0 00000 0001110000 000 0112344455554444211 111111 1
Q ss_pred cccCCEEE-ccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCccCCCCCchhhccc-CceE
Q 002063 480 LRQLSSLH-LEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSI 557 (973)
Q Consensus 480 l~~L~~L~-Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~l 557 (973)
.+-+.+.- .|++.++ .+|..+. ..-.+|++.+|.++ .+|.+ .+.+| .+||++|+++..-...|.++. +..|
T Consensus 421 c~c~~tVvRcSnk~lk-~lp~~iP--~d~telyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tl 493 (498)
T KOG4237|consen 421 CTCLDTVVRCSNKLLK-LLPRGIP--VDVTELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTL 493 (498)
T ss_pred cchhhhhHhhcccchh-hcCCCCC--chhHHHhcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhhee
Confidence 22233222 2333333 4444332 23456777777776 56655 55566 777777777644444455553 6666
Q ss_pred EccCC
Q 002063 558 DLSEN 562 (973)
Q Consensus 558 ~ls~N 562 (973)
-||+|
T Consensus 494 ilsyn 498 (498)
T KOG4237|consen 494 ILSYN 498 (498)
T ss_pred EEecC
Confidence 66655
No 418
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=2.2e-23 Score=245.02 Aligned_cols=264 Identities=28% Similarity=0.417 Sum_probs=139.5
Q ss_pred CCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEee
Q 002063 194 NLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDIS 273 (973)
Q Consensus 194 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls 273 (973)
.-..|+|++|.++ .+|..+. ++|+.|++++|+|+ .+|.. .++|++|+|++|+|+ .+|.. .++|+.|+++
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls 270 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVL---PPGLLELSIF 270 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCc---ccccceeecc
Confidence 4556777777777 4565554 36777777777776 34432 355666666666666 33422 2455566666
Q ss_pred ccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCccccccccccccccccccccccC
Q 002063 274 SNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSF 353 (973)
Q Consensus 274 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 353 (973)
+|.+. .+|..+ ++|+.|++++|+++. +|. . .++|+.|+|++|+|++ +
T Consensus 271 ~N~L~-~Lp~lp---~~L~~L~Ls~N~Lt~-LP~------------------------~---p~~L~~LdLS~N~L~~-L 317 (788)
T PRK15387 271 SNPLT-HLPALP---SGLCKLWIFGNQLTS-LPV------------------------L---PPGLQELSVSDNQLAS-L 317 (788)
T ss_pred CCchh-hhhhch---hhcCEEECcCCcccc-ccc------------------------c---ccccceeECCCCcccc-C
Confidence 66554 333322 334445555555442 222 1 2344455555554441 1
Q ss_pred ChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCC
Q 002063 354 PKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLST 433 (973)
Q Consensus 354 p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 433 (973)
|. + ..+|+.|++++|+|++ +|.. ..+|+.|+|++|+|++.+. ...
T Consensus 318 p~---------------------l------p~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~LP~----lp~ 362 (788)
T PRK15387 318 PA---------------------L------PSELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLASLPT----LPS 362 (788)
T ss_pred CC---------------------C------cccccccccccCcccc-cccc---ccccceEecCCCccCCCCC----CCc
Confidence 11 0 0124444555555542 3321 1244555555555543321 123
Q ss_pred CCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhcc
Q 002063 434 SLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLA 513 (973)
Q Consensus 434 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 513 (973)
+|+.|++++|+|+ .+|.. ..+|+.|+|++|+|++ +|.. .++|+.|++++|+|++ +|..+ .+|+.|+|+
T Consensus 363 ~L~~L~Ls~N~L~-~LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls 430 (788)
T PRK15387 363 ELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPMLP---SGLLSLSVY 430 (788)
T ss_pred ccceehhhccccc-cCccc---ccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcch---hhhhhhhhc
Confidence 5566666666666 34432 2456677777777663 4432 2456677777777663 44332 345666777
Q ss_pred ccccccCCCccccccCCCCeeecCCCccCCCCCchh
Q 002063 514 RNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNL 549 (973)
Q Consensus 514 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 549 (973)
+|+|+ .+|..+..+++|+.|+|++|+|++.+|..+
T Consensus 431 ~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 431 RNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred cCccc-ccChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 77766 566666666677777777777766666555
No 419
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.90 E-value=5.4e-23 Score=206.42 Aligned_cols=167 Identities=20% Similarity=0.226 Sum_probs=126.2
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
|+|.++++.+ ...+++..+..++.|++.||+||| +.+ ||+||+++.++.+++ ||.+.......
T Consensus 1 GsL~~~l~~~----~~~l~~~~~~~i~~qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~-- 63 (176)
T smart00750 1 VSLADILEVR----GRPLNEEEIWAVCLQCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKTPEQ-- 63 (176)
T ss_pred CcHHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeecccc--
Confidence 6899999753 335899999999999999999999 444 999999999999999 99987654321
Q ss_pred ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccC
Q 002063 836 SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVAS 915 (973)
Q Consensus 836 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
..||+.|+|||++.+..++.++||||+||++|||++|+.||..................... +.. .
T Consensus 64 -----~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--------~~~-~ 129 (176)
T smart00750 64 -----SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADD--------PRD-R 129 (176)
T ss_pred -----CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCC--------ccc-c
Confidence 25789999999999999999999999999999999999999654222222222211111100 000 0
Q ss_pred hhhHHHHH--HHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 916 ESIKEDMI--KLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 916 ~~~~~~~~--~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
........ .+.+++.+|++.+|.+||++.|+++++...
T Consensus 130 ~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 130 SNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred ccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 11122222 689999999999999999999999998765
No 420
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.89 E-value=5.2e-23 Score=241.83 Aligned_cols=263 Identities=25% Similarity=0.365 Sum_probs=183.4
Q ss_pred EEEeecccCCCCCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccc
Q 002063 245 KIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNR 324 (973)
Q Consensus 245 ~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 324 (973)
.|+|++|.|+ .+|..+. ++|+.|++++|+++ .+|.. +++|++|++++|+|+. +|.. .++|+.|++++|.
T Consensus 205 ~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls~N~ 273 (788)
T PRK15387 205 VLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLTS-LPVL---PPGLLELSIFSNP 273 (788)
T ss_pred EEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccCc-ccCc---ccccceeeccCCc
Confidence 3444444444 3343332 24455555555544 23321 2455555555555552 3321 2456666666666
Q ss_pred cCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCcc
Q 002063 325 FSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDG 404 (973)
Q Consensus 325 l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 404 (973)
++ .+|.. ..+|+.|++++|+++ .+| . ..++|+.|+|++|+|++ +|..
T Consensus 274 L~-~Lp~l---p~~L~~L~Ls~N~Lt-~LP------------------------~---~p~~L~~LdLS~N~L~~-Lp~l 320 (788)
T PRK15387 274 LT-HLPAL---PSGLCKLWIFGNQLT-SLP------------------------V---LPPGLQELSVSDNQLAS-LPAL 320 (788)
T ss_pred hh-hhhhc---hhhcCEEECcCCccc-ccc------------------------c---cccccceeECCCCcccc-CCCC
Confidence 65 33432 246778889999887 233 2 13679999999999995 5543
Q ss_pred ccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCC
Q 002063 405 LWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLS 484 (973)
Q Consensus 405 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 484 (973)
...|+.|++++|++++++. ...+|+.|+|++|+|++ +|.. ..+|+.|++++|+|++ +|.. ..+|+
T Consensus 321 ---p~~L~~L~Ls~N~L~~LP~----lp~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~ 385 (788)
T PRK15387 321 ---PSELCKLWAYNNQLTSLPT----LPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLK 385 (788)
T ss_pred ---cccccccccccCccccccc----cccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---ccccc
Confidence 2468889999999987543 23689999999999994 5643 3578999999999994 6654 35799
Q ss_pred EEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCccCCCCCchhhccc-CceEEccCCc
Q 002063 485 SLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQ 563 (973)
Q Consensus 485 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~l~ls~N~ 563 (973)
.|+|++|+|++ +|..+ .+|+.|++++|+|++ +|.. ..+|+.|+|++|+|+ .+|..+..+. |+.|+|++|+
T Consensus 386 ~LdLs~N~Lt~-LP~l~---s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~ 456 (788)
T PRK15387 386 ELIVSGNRLTS-LPVLP---SELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNP 456 (788)
T ss_pred eEEecCCcccC-CCCcc---cCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCC
Confidence 99999999995 55443 578999999999994 6754 357889999999999 7999888886 9999999999
Q ss_pred cccccCcccccC
Q 002063 564 LSGSVPLDFLRM 575 (973)
Q Consensus 564 l~~~~p~~~~~~ 575 (973)
|+|.+|..+...
T Consensus 457 Ls~~~~~~L~~l 468 (788)
T PRK15387 457 LSERTLQALREI 468 (788)
T ss_pred CCchHHHHHHHH
Confidence 999988765333
No 421
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=2.4e-22 Score=202.55 Aligned_cols=205 Identities=21% Similarity=0.251 Sum_probs=180.1
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
.|++.++||+|.||+++.|+..-+++.||||.-....+..++..|++..+.+ ..++|-.++.+..++.+-.+|+|.+ |
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-G 107 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-G 107 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-C
Confidence 6899999999999999999999999999999877778888999999999998 4689999998888888889999999 8
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCC-----ceEEecccCCcccc
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY-----EPKIADFGVAKIAE 830 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-----~~kl~Dfgl~~~~~ 830 (973)
-||.|+..-+ ...++..++..+|.|+..-++|+| ++.+|+|||||+|+||...+ .+.+.|||+|+.+.
T Consensus 108 PSLEDLFD~C----gR~FSvKTV~miA~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Yr 180 (449)
T KOG1165|consen 108 PSLEDLFDLC----GRRFSVKTVAMIAKQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYR 180 (449)
T ss_pred cCHHHHHHHh----cCcccHHhHHHHHHHHHHHHHHHH---hcceeecccCccceeecCCCCCCCceEEEEeccchhhhc
Confidence 8999988764 456899999999999999999999 88999999999999997654 48999999999876
Q ss_pred CCCC-----cccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCc
Q 002063 831 NSPK-----VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGK 889 (973)
Q Consensus 831 ~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~ 889 (973)
.... ........||.+||+--...|++.+.+.|+-|+|-++.+.+-|..||++..++..
T Consensus 181 Dp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tn 244 (449)
T KOG1165|consen 181 DPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTN 244 (449)
T ss_pred CccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcch
Confidence 5432 2233456799999999999999999999999999999999999999998765433
No 422
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.89 E-value=5.8e-24 Score=207.75 Aligned_cols=249 Identities=22% Similarity=0.296 Sum_probs=188.6
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec----cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
.+.....+|.+...|+.|+|++.. ..+++|++.. ....++|..|.-.++.+.||||+.+++.|..+....+|..
T Consensus 190 ~~lnl~tkl~e~hsgelwrgrwqg--ndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq 267 (448)
T KOG0195|consen 190 SSLNLITKLAESHSGELWRGRWQG--NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQ 267 (448)
T ss_pred hhhhhhhhhccCCCcccccccccC--cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeee
Confidence 345667789999999999999984 4577776654 2345678999999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEe--cccCCccc
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIA--DFGVAKIA 829 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~--Dfgl~~~~ 829 (973)
||+.|+|+..++.. ....++-.+..++|.++|+|++|||+- ++-|..--+..+.|+++++.+.+|. |--++-..
T Consensus 268 ~mp~gslynvlhe~---t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsfqe 343 (448)
T KOG0195|consen 268 YMPFGSLYNVLHEQ---TSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQE 343 (448)
T ss_pred eccchHHHHHHhcC---ccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeeeec
Confidence 99999999999864 455678888999999999999999964 3333344688999999999887765 32222111
Q ss_pred cCCCCcccccccCcccccccccccccCCCC---ccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVS---EKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
. ...-.+.||+||.++.++-+ .++|+|||++++||+.|...||.+...-+ . -.
T Consensus 344 --~-------gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspme--c-------------gm 399 (448)
T KOG0195|consen 344 --V-------GRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPME--C-------------GM 399 (448)
T ss_pred --c-------ccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchh--h-------------hh
Confidence 0 12236789999999877644 47999999999999999999997642100 0 01
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
++.-.......++.....+.+++.-|+..||.+||.++.|+-.|+++.
T Consensus 400 kialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 400 KIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred hhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 111112222333444556778888999999999999999999988764
No 423
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.88 E-value=3.3e-22 Score=237.09 Aligned_cols=305 Identities=19% Similarity=0.289 Sum_probs=138.9
Q ss_pred HHHHHHHHhcCCCCCCchHHHHHHHHHHHhcCCCcccccC----CCCCCCCCCCcce----------------eeeCCCC
Q 002063 13 ALLCFILVSVFPPSLSLNVETQALIQFKSKLKDPHGVLDS----WKESADSPCGFSG----------------ITCDSVT 72 (973)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~aLl~~k~~~~d~~~~l~~----W~~~~~~~c~w~g----------------v~C~~~~ 72 (973)
++=|+.-++ .|+.-....|.++++...+.+.-|. .+++ |++.++ +|-=.. |.|. .
T Consensus 46 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~p~-~~~~~~~~~~~~~~-fc~~~~~~~~~l~~~~~~~~~tv~~~--~ 120 (754)
T PRK15370 46 AQNCIAYLC-HPPETASPEEIKSKFECLRMLAFPA-YADNIQYSRGGADQ-YCILSENSQEILSIVFNTEGYTVEGG--G 120 (754)
T ss_pred HHHHHHHHh-CCCCCCCHHHHHHHHHHHHHhcCCc-hhhccccccCCCCc-ccccCCcchhhheeeecCCceEEecC--C
Confidence 445666665 3555556789999999999997664 3455 987764 785433 6664 3
Q ss_pred CceEEEeecCCCCCcccc--ccccCCCCCcEEeCCCCcccCccC---ccc-----cCCCCCcEEEecCCcccCCCCCcCC
Q 002063 73 GRVTEISFDNKSLSGEIS--SSISALQSLTVLSLPFNVLSGKLP---LEL-----SNCSNLKVLNVTGNAMVGSVPDLSA 142 (973)
Q Consensus 73 ~~v~~l~l~~~~l~~~~~--~~l~~l~~L~~L~Ls~n~l~~~~p---~~l-----~~l~~L~~L~L~~n~l~~~~~~l~~ 142 (973)
+.|+.+...+........ ....+....-. +=..+.-.++.+ .++ +-..+...|+++++.++..|..+.
T Consensus 121 ~~vt~l~~~g~~~~~~~~~~~~~~~~~~~w~-~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~LtsLP~~Ip- 198 (754)
T PRK15370 121 KSVTYTRVTESEQASSASGSKDAVNYELIWS-EWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLTTIPACIP- 198 (754)
T ss_pred CcccccccccccccccCCCCCChhhHHHHHH-HHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcCcCCcccc-
Confidence 456665554432221110 00000000000 000000000000 000 001233444444444444433332
Q ss_pred CCCCCEEeccCcccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCee
Q 002063 143 LKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTL 222 (973)
Q Consensus 143 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 222 (973)
++|+.|+|++|+++ .+|..+. ++|++|++++|.++ .+|..+. .+|+.|+|++|++. .+|..+. ++|+.|
T Consensus 199 -~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt--sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L 267 (754)
T PRK15370 199 -EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT--SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSL 267 (754)
T ss_pred -cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc--cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEE
Confidence 24444444444444 2333222 24445555544443 2333332 24555555555555 3444332 345555
Q ss_pred eccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCC
Q 002063 223 DICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFS 302 (973)
Q Consensus 223 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 302 (973)
+|++|+|+ .+|..+. ++|+.|++++|+|+ .+|..+. ++|+.|++++|+++ .+|..+. ++|+.|++++|.++
T Consensus 268 ~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp--~sL~~L~Ls~N~Lt-~LP~~l~--~sL~~L~Ls~N~Lt 338 (754)
T PRK15370 268 DLFHNKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLP--SGITHLNVQSNSLT-ALPETLP--PGLKTLEAGENALT 338 (754)
T ss_pred ECcCCccC-ccccccC--CCCcEEECCCCccc-cCcccch--hhHHHHHhcCCccc-cCCcccc--ccceeccccCCccc
Confidence 55555555 3444332 34555555555555 2333222 34555555555555 2343322 35555555555555
Q ss_pred CCCCCCcCCccccceeeccccccCCCCCcccccccccccccccccccc
Q 002063 303 GEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFS 350 (973)
Q Consensus 303 ~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~ 350 (973)
+ +|..+. ++|+.|++++|+|+ .+|..+. ++|+.|+|++|+|+
T Consensus 339 ~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt 380 (754)
T PRK15370 339 S-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT 380 (754)
T ss_pred c-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC
Confidence 3 343332 45555666666555 3444332 45666666666665
No 424
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=1.4e-22 Score=195.31 Aligned_cols=206 Identities=20% Similarity=0.189 Sum_probs=176.7
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCC-CceeeEeEEEEeCCeeEEEEE
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRH-RNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h-pniv~l~~~~~~~~~~~lv~e 751 (973)
...+.|.++++||.|+||.+|.|..-.+|+.||||+-.......++..|.++.+.+++ ..|-.+..+..++.+-.+||+
T Consensus 12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd 91 (341)
T KOG1163|consen 12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD 91 (341)
T ss_pred eeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence 3456899999999999999999999999999999998888888889999999999975 677777888888888999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCC---CceEEecccCCcc
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED---YEPKIADFGVAKI 828 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~---~~~kl~Dfgl~~~ 828 (973)
.+ |.+|.+.+.-. ...++..+++..|-|+..-++|+| .++.|||||||+|+|+.-+ ..+.+.|||+|+.
T Consensus 92 LL-GPsLEdLfnfC----~R~ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKk 163 (341)
T KOG1163|consen 92 LL-GPSLEDLFNFC----SRRFTMKTVLMLADQMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKK 163 (341)
T ss_pred cc-CccHHHHHHHH----hhhhhHHhHHHHHHHHHHHHHHHH---hhccccccCCccceeeccccccceEEEEeccchhh
Confidence 99 88999988754 335788899999999999999999 7899999999999999753 4589999999987
Q ss_pred ccCCCC-----cccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccC
Q 002063 829 AENSPK-----VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYG 886 (973)
Q Consensus 829 ~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~ 886 (973)
+..... ........||.+|.+--+..+.+.+.+.|+-|+|.++..+--|..||++..+
T Consensus 164 y~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka 226 (341)
T KOG1163|consen 164 YRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKA 226 (341)
T ss_pred hccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccch
Confidence 754322 2223456799999998888888888999999999999999999999987643
No 425
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.88 E-value=3.1e-22 Score=218.45 Aligned_cols=165 Identities=18% Similarity=0.147 Sum_probs=129.0
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcC-CCceEEEEEeecc-------ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCC
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKK-NAGTVAVKQLWKG-------DGVKVFAAEMEILGKIRHRNILKLYACLLKGG 744 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~-~~~~vavK~~~~~-------~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 744 (973)
....+|++.+.||+|+||+||+|++.. +++.||||+.... .....+.+|++++++++|+|+++.+.. .+
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~ 91 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TG 91 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cC
Confidence 345679999999999999999999875 6778899986432 124568999999999999999853332 24
Q ss_pred eeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCC-CCCCeeecCCCceEEecc
Q 002063 745 SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDI-KSSNILLDEDYEPKIADF 823 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dl-kp~Nill~~~~~~kl~Df 823 (973)
..|+||||++|++|.. .. . .. ...++.|+++||+|+| +++|+|||| ||+||+++.++.+||+||
T Consensus 92 ~~~LVmE~~~G~~L~~-~~---~--~~------~~~~~~~i~~aL~~lH---~~gIiHrDL~KP~NILv~~~~~ikLiDF 156 (365)
T PRK09188 92 KDGLVRGWTEGVPLHL-AR---P--HG------DPAWFRSAHRALRDLH---RAGITHNDLAKPQNWLMGPDGEAAVIDF 156 (365)
T ss_pred CcEEEEEccCCCCHHH-hC---c--cc------hHHHHHHHHHHHHHHH---HCCCeeCCCCCcceEEEcCCCCEEEEEC
Confidence 5799999999999962 11 0 00 1357889999999999 789999999 999999999999999999
Q ss_pred cCCccccCCCCccc------ccccCccccccccccccc
Q 002063 824 GVAKIAENSPKVSD------YSCFAGTHGYIAPELAYT 855 (973)
Q Consensus 824 gl~~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~ 855 (973)
|+++.......... .....+++.|+|||++..
T Consensus 157 GlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 157 QLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred ccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 99987754332111 134568889999999853
No 426
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=3.7e-21 Score=211.83 Aligned_cols=260 Identities=22% Similarity=0.232 Sum_probs=193.9
Q ss_pred CCcccCeecccCcEEEEEEEEcCCC-ceEEEEEeecccc--HHHHHHHHHHHHhcCC----CceeeEeEEE-EeCCeeEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNA-GTVAVKQLWKGDG--VKVFAAEMEILGKIRH----RNILKLYACL-LKGGSSFL 748 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~-~~vavK~~~~~~~--~~~~~~E~~~l~~l~h----pniv~l~~~~-~~~~~~~l 748 (973)
+|.+.+.||+|+||.||+|.+..++ ..+|+|....... ...+..|..++..+.. +++..+++.. ..+...|+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 7999999999999999999998764 5789997765322 2267889999988863 6888999988 47778999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCC-----CceEEecc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED-----YEPKIADF 823 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-----~~~kl~Df 823 (973)
||+.+ |.+|.++.... ....++..+..+++.|++.+|+++| +.|++||||||.|+++... ..+.+.||
T Consensus 99 VM~l~-G~sL~dl~~~~---~~~~fs~~T~l~ia~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDf 171 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRN---PPGRFSRKTVLRIAIQNLNALEDLH---SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDF 171 (322)
T ss_pred EEecc-CccHHHHHHhC---CCCCcCHhHHHHHHHHHHHHHHHHH---hcCcccCCcCHHHeeecCCCCcccceEEEEec
Confidence 99988 88999987654 2567899999999999999999999 8999999999999999865 35999999
Q ss_pred cCCcccc--CCCC-----ccc-ccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHH
Q 002063 824 GVAKIAE--NSPK-----VSD-YSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWV 895 (973)
Q Consensus 824 gl~~~~~--~~~~-----~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~ 895 (973)
|+++... .... ... .....||..|.++.+..+...+.+.|+||++.++.|+..|..||........ .....
T Consensus 172 Glar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-~~~~~ 250 (322)
T KOG1164|consen 172 GLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-KSKFE 250 (322)
T ss_pred CCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-HHHHH
Confidence 9998332 1111 111 1235699999999999999999999999999999999999999965432111 11111
Q ss_pred HHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 896 STHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
........ .. . .... ...+.++...+-..+...+|....+.+.+++...
T Consensus 251 ~~~~~~~~------~~-~-~~~~---~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~ 299 (322)
T KOG1164|consen 251 KDPRKLLT------DR-F-GDLK---PEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFD 299 (322)
T ss_pred HHhhhhcc------cc-c-cCCC---hHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHH
Confidence 11100000 00 0 0111 2234444444556899999999999988776643
No 427
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=5.5e-22 Score=231.09 Aligned_cols=254 Identities=20% Similarity=0.246 Sum_probs=190.9
Q ss_pred cccCeecccCcEEEEEEEEcCCCceEEEEEee----ccccH----HHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 679 EEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLW----KGDGV----KVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 679 ~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~----~~~~~----~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
...+.+|.|++|.|+.+.........+.|... ..... ..+..|+.+-..++|||++..+..+.+....+-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 34578999999988888877666556655432 21111 12556777788899999998888777766666669
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++ +|+..+... ..+...++.-++.|+..|++|+| +.|+.|||+|++|++++.+|.+||+|||.+....
T Consensus 401 E~~~~-Dlf~~~~~~-----~~~~~~e~~c~fKqL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~ 471 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSN-----GKLTPLEADCFFKQLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKIIDFGAASVFR 471 (601)
T ss_pred hcccH-HHHHHHhcc-----cccchhhhhHHHHHHHHHHHHHH---hcCceeccCccccEEEecCCceEEeecCcceeec
Confidence 99999 999988752 34667778889999999999999 8899999999999999999999999999998665
Q ss_pred CCCCc--ccccccCcccccccccccccCCCCc-cchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 831 NSPKV--SDYSCFAGTHGYIAPELAYTCKVSE-KSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 831 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~-~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
.+... ......+|+..|+|||++.+..|.+ .+||||.|+++..|.+|+.||......+....+. ....+
T Consensus 472 ~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~--------~~~~~ 543 (601)
T KOG0590|consen 472 YPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTN--------NYSDQ 543 (601)
T ss_pred cCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhh--------ccccc
Confidence 44333 3344578999999999999999986 4899999999999999999998764333332000 00001
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.-............+.+...++.+|++++|.+|.|+.+|++.
T Consensus 544 ~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 544 RNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred cccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 111111122344556677889999999999999999999753
No 428
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.85 E-value=3.7e-21 Score=228.16 Aligned_cols=245 Identities=25% Similarity=0.441 Sum_probs=120.7
Q ss_pred CCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEeec
Q 002063 195 LTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISS 274 (973)
Q Consensus 195 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~ 274 (973)
.+.|++++++++ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|++|++++|+++ .+|..+. .+|+.|+|++
T Consensus 180 ~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~ 250 (754)
T PRK15370 180 KTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSI 250 (754)
T ss_pred ceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcC
Confidence 344555555444 2333322 24455555555554 3343332 24555555555554 3333322 2455555555
Q ss_pred cccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCccccccccccccccccccccccCC
Q 002063 275 NQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFP 354 (973)
Q Consensus 275 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p 354 (973)
|.+. .+|..+. ++|+.|++++|+++ .+|..+. ++|+.|++++|++++ +|..+. ++|+.|++++|.++ .+|
T Consensus 251 N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt-~LP 320 (754)
T PRK15370 251 NRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLT-ALP 320 (754)
T ss_pred CccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCccc-cCC
Confidence 5554 3444332 24555555555554 2343332 245555555555542 333221 34556666666655 122
Q ss_pred hhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCC
Q 002063 355 KYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTS 434 (973)
Q Consensus 355 ~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~ 434 (973)
..+ .++|+.|++++|.+++ +|..+. ++|+.|++++|+++..+. .+ .++
T Consensus 321 ------------------------~~l--~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~~LP~-~l--p~~ 368 (754)
T PRK15370 321 ------------------------ETL--PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQITVLPE-TL--PPT 368 (754)
T ss_pred ------------------------ccc--cccceeccccCCcccc-CChhhc--CcccEEECCCCCCCcCCh-hh--cCC
Confidence 111 1456667777777663 454432 456666666666653322 11 245
Q ss_pred CCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCcccc----ccccccCCEEEccCcccc
Q 002063 435 LSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSA----LGALRQLSSLHLEENALT 494 (973)
Q Consensus 435 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~L~~L~Ls~N~l~ 494 (973)
|+.|+|++|+|+ .+|..+. ..|+.|++++|+++ .+|.. +..++++..|+|.+|.+.
T Consensus 369 L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 369 ITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred cCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 666777777666 3454443 25666677777766 33332 233456666666666665
No 429
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.83 E-value=2.6e-19 Score=199.91 Aligned_cols=258 Identities=32% Similarity=0.390 Sum_probs=195.2
Q ss_pred CcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc-----cHHHHHHHHHHHHhcCCC-ceeeEeEEEEeCCeeEEEEE
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----GVKVFAAEMEILGKIRHR-NILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~hp-niv~l~~~~~~~~~~~lv~e 751 (973)
|+..+.||.|+||.||++.+. ..+|+|.+.... ....+.+|+.+++.+.|+ +++++.+++......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 667788999999999999988 688999886632 356789999999999988 79999999977777899999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCC-ceEEecccCCcccc
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY-EPKIADFGVAKIAE 830 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfgl~~~~~ 830 (973)
|+.++++.+++...... ..+.......++.|++.+++|+| +.+++|||+||+||+++..+ .++++|||.+....
T Consensus 79 ~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~ 153 (384)
T COG0515 79 YVDGGSLEDLLKKIGRK--GPLSESEALFILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLP 153 (384)
T ss_pred cCCCCcHHHHHHhcccc--cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEEEeccCcceecC
Confidence 99999999766643111 35788889999999999999999 78899999999999999988 79999999998554
Q ss_pred CCCCcc----cccccCccccccccccccc---CCCCccchHHHHHHHHHHHHhCCCCCCcccCC--CccHHHHHHHhhcc
Q 002063 831 NSPKVS----DYSCFAGTHGYIAPELAYT---CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGD--GKDIVYWVSTHLNN 901 (973)
Q Consensus 831 ~~~~~~----~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~--~~~~~~~~~~~~~~ 901 (973)
...... ......|+..|+|||.+.+ ..+....|+||+|++++++++|..||...... .......+......
T Consensus 154 ~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 233 (384)
T COG0515 154 DPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP 233 (384)
T ss_pred CCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc
Confidence 433221 2345679999999999987 57888999999999999999999997654321 11111111111100
Q ss_pred cccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 902 HENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.................+.+++..|+..+|..|.+..+....
T Consensus 234 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 234 ------SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ------ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 000000000001223457788889999999999999988765
No 430
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.81 E-value=1.7e-19 Score=188.07 Aligned_cols=233 Identities=21% Similarity=0.280 Sum_probs=149.9
Q ss_pred CcccCeecccCcEEEEEEEEcCCCceEEEEEeec-----cccHHHHHHHHHHHHhcC----------CCceeeEeEEEEe
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-----GDGVKVFAAEMEILGKIR----------HRNILKLYACLLK 742 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~-----~~~~~~~~~E~~~l~~l~----------hpniv~l~~~~~~ 742 (973)
+...+.||.|+++.||.+.+.++++.+|||+... ....+++.+|.-....+. |-.++-.++....
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 4567889999999999999999999999998754 234556666665554432 2233333333221
Q ss_pred ---------C--C------eeEEEEEccCCCchHHHHHhhhcCC--CCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEec
Q 002063 743 ---------G--G------SSFLVLEYMPNGNLFQALHKRVKEG--KPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHR 803 (973)
Q Consensus 743 ---------~--~------~~~lv~e~~~~gsL~~~l~~~~~~~--~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~ 803 (973)
. . ..+++|+-+ .++|.+.+....... ........+..+..|+.+.++++| ..|++|+
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh---~~GlVHg 169 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLH---SYGLVHG 169 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEEES
T ss_pred cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHh---hcceEec
Confidence 1 1 226788888 569988875422111 123444566677899999999999 7899999
Q ss_pred CCCCCCeeecCCCceEEecccCCccccCCCCcccccccCccccccccccccc--------CCCCccchHHHHHHHHHHHH
Q 002063 804 DIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYT--------CKVSEKSDVFSFGVVLLELV 875 (973)
Q Consensus 804 Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwslG~~l~ell 875 (973)
||+|+|++++++|.++|+||+.....+.... ....+..|.+||.... ..++.+.|.|++|+++|.++
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~~~-----~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lW 244 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTRYR-----CSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLW 244 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEEEE-----GGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHH
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCceee-----ccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHH
Confidence 9999999999999999999997765433211 1234578999997643 24788999999999999999
Q ss_pred hCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCC
Q 002063 876 TGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLR 940 (973)
Q Consensus 876 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 940 (973)
+|..||+.......... .+-.+ . +.++.+..++..+++++|++|
T Consensus 245 C~~lPf~~~~~~~~~~~--------------~f~~C------~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 245 CGRLPFGLSSPEADPEW--------------DFSRC------R-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HSS-STCCCGGGSTSGG--------------GGTTS------S----HHHHHHHHHHT-SSGGGS
T ss_pred HccCCCCCCCccccccc--------------cchhc------C-CcCHHHHHHHHHHccCCcccC
Confidence 99999986522111100 11111 1 556678889999999999988
No 431
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.80 E-value=2.3e-20 Score=214.79 Aligned_cols=248 Identities=25% Similarity=0.325 Sum_probs=181.1
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc---cHHHH---HHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD---GVKVF---AAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~---~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
++...+.||.+.|=+|.+|++.+ | .|+||++-+.. ..+.+ .+|++ ...++|||++++.-+...+...|||-
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-G-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvR 100 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-G-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVR 100 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-c-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHH
Confidence 56778899999999999999886 5 59999886632 22333 34444 45569999999988877788889999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
+|+.+ +|+|.+.. ++-+...+...|+.|++.|+..+| ..+|+|||||.+||||+.=..+.|+||..-+..-
T Consensus 101 qyvkh-nLyDRlST-----RPFL~~iEKkWiaFQLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtY 171 (1431)
T KOG1240|consen 101 QYVKH-NLYDRLST-----RPFLVLIEKKWIAFQLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDFASFKPTY 171 (1431)
T ss_pred HHHhh-hhhhhhcc-----chHHHHHHHHHHHHHHHHHHHHHH---HcCccccccccceEEEeeechhhhhcccccCCcc
Confidence 99965 88888864 456778888899999999999999 8899999999999999999999999998765431
Q ss_pred -CCCCcccccccC----cccccccccccccC----------C-CCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHH
Q 002063 831 -NSPKVSDYSCFA----GTHGYIAPELAYTC----------K-VSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVY 893 (973)
Q Consensus 831 -~~~~~~~~~~~~----gt~~y~aPE~~~~~----------~-~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~ 893 (973)
+.+...++..+. .-.+|.|||.+..+ . .+++-||||+||++.|+++ |++||.-. +
T Consensus 172 LPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS--------Q 243 (1431)
T KOG1240|consen 172 LPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS--------Q 243 (1431)
T ss_pred CCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH--------H
Confidence 223333333222 33579999987431 2 6678999999999999998 78998633 1
Q ss_pred HHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 894 WVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
..+-+..........+ +..+ -..++.++..|++.||.+|.++++.++.-++
T Consensus 244 L~aYr~~~~~~~e~~L------e~Ie--d~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG 294 (1431)
T KOG1240|consen 244 LLAYRSGNADDPEQLL------EKIE--DVSLRNLILSMIQRDPSKRLSAEDYLQKYRG 294 (1431)
T ss_pred HHhHhccCccCHHHHH------HhCc--CccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence 1111111111000000 0001 1147789999999999999999999988544
No 432
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.79 E-value=4.1e-19 Score=178.64 Aligned_cols=139 Identities=21% Similarity=0.198 Sum_probs=107.3
Q ss_pred cCeecccCcEEEEEEEEcCCCceEEEEEeeccc----c-------HHH-----------------HHHHHHHHHhcCCCc
Q 002063 681 DNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----G-------VKV-----------------FAAEMEILGKIRHRN 732 (973)
Q Consensus 681 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~----~-------~~~-----------------~~~E~~~l~~l~hpn 732 (973)
...||+|+||.||+|.+. +|+.||||+++... . ..+ ..+|++.+.++.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 457999999999999997 79999999986531 1 112 234999999998887
Q ss_pred eeeEeEEEEeCCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeee
Q 002063 733 ILKLYACLLKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL 812 (973)
Q Consensus 733 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill 812 (973)
+.....+... ..++||||++++++...... ...++......++.|++.+++++|+ +.+|+||||||+||++
T Consensus 81 v~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~-----~~~~~~~~~~~i~~qi~~~L~~l~H--~~giiHrDlkP~NIli 151 (190)
T cd05147 81 IPCPEPILLK--SHVLVMEFIGDDGWAAPRLK-----DAPLSESKARELYLQVIQIMRILYQ--DCRLVHADLSEYNLLY 151 (190)
T ss_pred CCCCcEEEec--CCEEEEEEeCCCCCcchhhh-----cCCCCHHHHHHHHHHHHHHHHHHHH--hCCcccCCCCHHHEEE
Confidence 7544333222 23899999988877554321 2357888899999999999999932 6799999999999999
Q ss_pred cCCCceEEecccCCcccc
Q 002063 813 DEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 813 ~~~~~~kl~Dfgl~~~~~ 830 (973)
+ ++.++++|||++...+
T Consensus 152 ~-~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 152 H-DGKLYIIDVSQSVEHD 168 (190)
T ss_pred E-CCcEEEEEccccccCC
Confidence 8 4789999999997553
No 433
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.79 E-value=2.6e-19 Score=181.12 Aligned_cols=169 Identities=14% Similarity=0.178 Sum_probs=130.1
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc-----cHHH------HHHHHHHHHhcCCCceeeEeEEEEe
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----GVKV------FAAEMEILGKIRHRNILKLYACLLK 742 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-----~~~~------~~~E~~~l~~l~hpniv~l~~~~~~ 742 (973)
.-++|+..+.+|.|+||.||.+.. ++..+|||++..+. .... +.+|++.+.++.||+|..+.+++..
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 346899999999999999999765 36689999986521 1112 5789999999999999999988664
Q ss_pred C--------CeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC
Q 002063 743 G--------GSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE 814 (973)
Q Consensus 743 ~--------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~ 814 (973)
. ...++||||++|.+|.++.. ++. ....+++.++..+| ..+++|||++|.||+++.
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~---------~~~----~~~~~i~~~l~~lH---~~gi~H~Dikp~Nili~~ 170 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE---------ISE----DVKAKIKASIESLH---QHGMVSGDPHKGNFIVSK 170 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh---------ccH----HHHHHHHHHHHHHH---HcCCccCCCChHHEEEeC
Confidence 3 35799999999999977632 122 23558999999999 889999999999999999
Q ss_pred CCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHH
Q 002063 815 DYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELV 875 (973)
Q Consensus 815 ~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell 875 (973)
+| ++++|||.......... . ..+.....+..++|+|+||+++....
T Consensus 171 ~g-i~liDfg~~~~~~e~~a-~-------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 171 NG-LRIIDLSGKRCTAQRKA-K-------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CC-EEEEECCCcccccchhh-H-------------HHHHHHhHhcccccccceeEeehHHH
Confidence 88 99999998764421110 0 11333445667899999999877654
No 434
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.77 E-value=5.9e-21 Score=174.55 Aligned_cols=158 Identities=31% Similarity=0.489 Sum_probs=74.3
Q ss_pred cEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccc
Q 002063 124 KVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHC 203 (973)
Q Consensus 124 ~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n 203 (973)
+.|.||+|+++..+|.++.|.+|+.|++++|+++ .+|..+..+++|+.|+++-|++. .+|..|+.++.|+.|+|.+|
T Consensus 36 TrLtLSHNKl~~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~--~lprgfgs~p~levldltyn 112 (264)
T KOG0617|consen 36 TRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN--ILPRGFGSFPALEVLDLTYN 112 (264)
T ss_pred hhhhcccCceeecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh--cCccccCCCchhhhhhcccc
Confidence 3333333333333333444444444444444433 33344444444444444444332 23444444444444444444
Q ss_pred cCCC-CCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEeeccccccccC
Q 002063 204 NLRG-RIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLP 282 (973)
Q Consensus 204 ~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p 282 (973)
++.. .+|..|..++.|+-|+|++|.+. .+|..++++++|+.|.+..|.+- .+|..++.++.|++|.+.+|+++ .+|
T Consensus 113 nl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~-vlp 189 (264)
T KOG0617|consen 113 NLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT-VLP 189 (264)
T ss_pred ccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceee-ecC
Confidence 4432 34444444555555555555554 44555555555555555555555 45555555555555555555555 455
Q ss_pred CccCC
Q 002063 283 EEIGN 287 (973)
Q Consensus 283 ~~~~~ 287 (973)
..+++
T Consensus 190 pel~~ 194 (264)
T KOG0617|consen 190 PELAN 194 (264)
T ss_pred hhhhh
Confidence 54444
No 435
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.77 E-value=3.6e-18 Score=172.74 Aligned_cols=139 Identities=20% Similarity=0.227 Sum_probs=109.3
Q ss_pred cCeecccCcEEEEEEEEcCCCceEEEEEeecccc----------------------------HHHHHHHHHHHHhcCCCc
Q 002063 681 DNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDG----------------------------VKVFAAEMEILGKIRHRN 732 (973)
Q Consensus 681 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~----------------------------~~~~~~E~~~l~~l~hpn 732 (973)
...||+|++|.||+|++. +|+.||||++..... ...+.+|.+.+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 468999999999999987 799999998875310 112357899999999998
Q ss_pred eeeEeEEEEeCCeeEEEEEccCCCchHHH-HHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCee
Q 002063 733 ILKLYACLLKGGSSFLVLEYMPNGNLFQA-LHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNIL 811 (973)
Q Consensus 733 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nil 811 (973)
+.....+... ..++||||++++++... +.. ..++......++.|++.++.++|+ ..+|+||||||+||+
T Consensus 81 i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~------~~~~~~~~~~i~~~l~~~l~~lH~--~~givHrDlkP~NIl 150 (190)
T cd05145 81 VPVPEPILLK--KNVLVMEFIGDDGSPAPRLKD------VPLEEEEAEELYEQVVEQMRRLYQ--EAGLVHGDLSEYNIL 150 (190)
T ss_pred CCCceEEEec--CCEEEEEEecCCCchhhhhhh------ccCCHHHHHHHHHHHHHHHHHHHH--hCCEecCCCChhhEE
Confidence 7655444333 24899999988855433 322 245677888999999999999993 279999999999999
Q ss_pred ecCCCceEEecccCCccccC
Q 002063 812 LDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 812 l~~~~~~kl~Dfgl~~~~~~ 831 (973)
++ ++.++++|||++.....
T Consensus 151 l~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 151 YH-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred EE-CCCEEEEEcccceecCC
Confidence 99 88999999999986543
No 436
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.77 E-value=7.8e-19 Score=181.13 Aligned_cols=195 Identities=22% Similarity=0.271 Sum_probs=135.2
Q ss_pred CCCceeeEeEEEEe---------------------------CCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHH
Q 002063 729 RHRNILKLYACLLK---------------------------GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKI 781 (973)
Q Consensus 729 ~hpniv~l~~~~~~---------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i 781 (973)
+|||||++..+|.+ +...|+||...+ .+|..|+..+ ..+......+
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~------~~s~r~~~~~ 346 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTR------HRSYRTGRVI 346 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcC------CCchHHHHHH
Confidence 59999999988753 124599999884 5999999753 2344456678
Q ss_pred HHHHHHHHhHhhhcCCCCeEecCCCCCCeeec--CCC--ceEEecccCCccccCCCC----cccccccCccccccccccc
Q 002063 782 ALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD--EDY--EPKIADFGVAKIAENSPK----VSDYSCFAGTHGYIAPELA 853 (973)
Q Consensus 782 ~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~--~~~--~~kl~Dfgl~~~~~~~~~----~~~~~~~~gt~~y~aPE~~ 853 (973)
..|+++|+.||| +++|.|||+|.+||++. +|+ ...|+|||.+--.+...- ....-...|....||||+.
T Consensus 347 laQlLEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ 423 (598)
T KOG4158|consen 347 LAQLLEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIA 423 (598)
T ss_pred HHHHHHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhh
Confidence 899999999999 88999999999999984 443 478999998753332111 1112234577889999997
Q ss_pred ccCC------CCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHH
Q 002063 854 YTCK------VSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLK 927 (973)
Q Consensus 854 ~~~~------~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (973)
...+ -..++|.|+.|.+.||+++...||.....-.-+...+....+ +..+..+...+.+
T Consensus 424 ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qL---------------Palp~~vpp~~rq 488 (598)
T KOG4158|consen 424 TAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQL---------------PALPSRVPPVARQ 488 (598)
T ss_pred hcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhC---------------CCCcccCChHHHH
Confidence 5432 235799999999999999999999763211111111111111 1122334455778
Q ss_pred HHHHhcCCCCCCCCCHHHHHH
Q 002063 928 IAVVCTTKLPNLRPPMREVVK 948 (973)
Q Consensus 928 l~~~cl~~dP~~Rpt~~evl~ 948 (973)
++...++.||.+|+++.-...
T Consensus 489 lV~~lL~r~pskRvsp~iAAN 509 (598)
T KOG4158|consen 489 LVFDLLKRDPSKRVSPNIAAN 509 (598)
T ss_pred HHHHHhcCCccccCCccHHHh
Confidence 888899999999998764433
No 437
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.77 E-value=4e-18 Score=168.31 Aligned_cols=185 Identities=17% Similarity=0.159 Sum_probs=136.8
Q ss_pred cccCeecccCcEEEEEEEEcCCCceEEEEEeecccc------HHHHHHHHHHHHhcC-CCceeeEeEEEEeCCeeEEEEE
Q 002063 679 EEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDG------VKVFAAEMEILGKIR-HRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 679 ~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~------~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~e 751 (973)
.+...|++|+||+||.+.. .+..++.+.+..... ...+.+|+++++++. |+++.+++++ ...+++||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme 78 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS 78 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence 3557899999999997776 367788776654222 125789999999995 5788888886 34699999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCC-CCCCeeecCCCceEEecccCCcccc
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDI-KSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dl-kp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
|++|.+|.+.... ....++.|++++++++| +.||+|||| ||.||+++.++.++|+|||++....
T Consensus 79 yI~G~~L~~~~~~------------~~~~~~~qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~ 143 (218)
T PRK12274 79 YLAGAAMYQRPPR------------GDLAYFRAARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGN 143 (218)
T ss_pred eecCccHHhhhhh------------hhHHHHHHHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEEEEECCCceecC
Confidence 9999988654321 01246788999999999 789999999 7999999999999999999998655
Q ss_pred CCCCc------cccc-----ccCcccccccccccccC-CCC-ccchHHHHHHHHHHHHhCCCCCCcc
Q 002063 831 NSPKV------SDYS-----CFAGTHGYIAPELAYTC-KVS-EKSDVFSFGVVLLELVTGRKPVEEE 884 (973)
Q Consensus 831 ~~~~~------~~~~-----~~~gt~~y~aPE~~~~~-~~~-~~~DvwslG~~l~ell~g~~pf~~~ 884 (973)
..... .+.. -...++.|++|+...-- ..+ .+.+.++.|+-+|.++|+..|+-.+
T Consensus 144 ~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 144 PRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 43321 0000 12356777777754321 223 5679999999999999998887543
No 438
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.75 E-value=2.7e-19 Score=197.15 Aligned_cols=224 Identities=27% Similarity=0.315 Sum_probs=174.5
Q ss_pred eecccCcEEEEEEEE---cCCCceEEEEEeeccc----cHHHHHHHHHHHHhcC-CCceeeEeEEEEeCCeeEEEEEccC
Q 002063 683 LIGSGGTGKVYRLDL---KKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIR-HRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 683 ~lG~G~~g~Vy~a~~---~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
.+|+|+||.|++++- .+.+.-+|+|++++.. .......|..++...+ ||.++++...++.+...+++++|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 379999999996543 3457789999887632 2224556888888886 9999999999999999999999999
Q ss_pred CCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCC
Q 002063 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~ 834 (973)
+|.+...+.. ...+.......+...+|-|++++| +.+++|||+|++||+++.+|.+++.|||+++..-....
T Consensus 81 gg~lft~l~~-----~~~f~~~~~~~~~aelaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~ 152 (612)
T KOG0603|consen 81 GGDLFTRLSK-----EVMFDELDVAFYLAELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI 152 (612)
T ss_pred cchhhhcccc-----CCchHHHHHHHHHHHHHHHHhhcc---hhHHHHhcccccceeecccCccccCCchhhhHhHhhhh
Confidence 9999887764 344667777778888999999999 89999999999999999999999999999875533211
Q ss_pred cccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcccccc
Q 002063 835 VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVA 914 (973)
Q Consensus 835 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (973)
.+||..|||||++. ....++|.||+|++++||++|..||..+ .. ..... . .
T Consensus 153 ------~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~------~~---~~Il~----------~--~ 203 (612)
T KOG0603|consen 153 ------ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGD------TM---KRILK----------A--E 203 (612)
T ss_pred ------cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchH------HH---HHHhh----------h--c
Confidence 27899999999987 5678999999999999999999999751 11 11111 0 1
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCCCCCCCH
Q 002063 915 SESIKEDMIKLLKIAVVCTTKLPNLRPPM 943 (973)
Q Consensus 915 ~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~ 943 (973)
...+.+......+++..++..+|..|.-.
T Consensus 204 ~~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 204 LEMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred cCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 12344555566677777778888888644
No 439
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.75 E-value=2.7e-20 Score=170.28 Aligned_cols=168 Identities=27% Similarity=0.465 Sum_probs=146.2
Q ss_pred cccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCccccccccccccc
Q 002063 92 SISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLV 171 (973)
Q Consensus 92 ~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 171 (973)
.+..+.+++.|.||+|+++ .+|..++.+.+|++|++++|++...|++++.+++|+.|+++-|++. ..|..|+.++.|+
T Consensus 28 gLf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 28 GLFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIEELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred cccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhhhcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 4667788888899999988 6788899999999999999999998888999999999999988887 7889999999999
Q ss_pred eEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecc
Q 002063 172 SLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYAN 251 (973)
Q Consensus 172 ~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 251 (973)
.|||.+|.++...+|..|..++.|+.|+|+.|.+. .+|..++++++|+.|.+.+|.+- .+|..++.+.+|++|++.+|
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccc
Confidence 99999998888888888888888999999999988 78888899999999999999887 78899999999999999999
Q ss_pred cCCCCCCcccccc
Q 002063 252 NLTGELPAELGNL 264 (973)
Q Consensus 252 ~l~~~~~~~l~~l 264 (973)
+++ .+|+.++++
T Consensus 184 rl~-vlppel~~l 195 (264)
T KOG0617|consen 184 RLT-VLPPELANL 195 (264)
T ss_pred eee-ecChhhhhh
Confidence 998 677766654
No 440
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.75 E-value=5e-20 Score=204.11 Aligned_cols=273 Identities=21% Similarity=0.273 Sum_probs=185.4
Q ss_pred EEeecCCCCC-ccccccccCCCCCcEEeCCCCcccCc----cCccccCCCCCcEEEecCCcccCCC-------CCcCCCC
Q 002063 77 EISFDNKSLS-GEISSSISALQSLTVLSLPFNVLSGK----LPLELSNCSNLKVLNVTGNAMVGSV-------PDLSALK 144 (973)
Q Consensus 77 ~l~l~~~~l~-~~~~~~l~~l~~L~~L~Ls~n~l~~~----~p~~l~~l~~L~~L~L~~n~l~~~~-------~~l~~l~ 144 (973)
.|+|.++.++ +.....+..+++|++|+++++.++.. ++..+...++|++|+++++.+.+.+ ..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4677777877 44455667788899999999888543 5666777888999999888876311 1356678
Q ss_pred CCCEEeccCcccCCccccccccccc---cceEEccCCcCCCCCC---cccccCC-CCCCEEEcccccCCCC----CChhh
Q 002063 145 NLEIFDLSINYFTGRFPRWVVNLTQ---LVSLSIGDNVYDEAEI---PESIGNL-KNLTYLFLAHCNLRGR----IPESI 213 (973)
Q Consensus 145 ~L~~L~Ls~n~l~~~~~~~~~~l~~---L~~L~l~~n~l~~~~i---p~~~~~l-~~L~~L~L~~n~l~~~----~p~~l 213 (973)
+|+.|++++|.+.+..+..+..+.+ |++|++++|.++.... ...+..+ ++|+.|++++|.+++. ++..+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 8899999888888767777766666 8888888887764222 2345566 7888888888888843 33455
Q ss_pred hccCCCCeeeccccccccc----cchhhhccccccEEEeecccCCCCC----CccccccccccEEEeeccccccccCCcc
Q 002063 214 SELRELGTLDICRNKISGE----FPRSIRKLQKLWKIELYANNLTGEL----PAELGNLTLLQEFDISSNQMYGKLPEEI 285 (973)
Q Consensus 214 ~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~L~~n~l~~~~----~~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 285 (973)
..+++|++|++++|.+++. ++..+..+++|++|+|++|.+++.. ...+..+++|++|++++|.+++.....+
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l 241 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAAL 241 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHH
Confidence 6667888888888888743 3334555668888888888877432 3345567788888888888775333322
Q ss_pred C-----CCCCccEEEcccCCCCC----CCCCCcCCccccceeeccccccCCC----CCcccccc-ccccccccccccc
Q 002063 286 G-----NLKNLTVFQCFKNNFSG----EFPSGFGDMRKLFAFSIYGNRFSGP----FPENLGRY-TALTDVDISENQF 349 (973)
Q Consensus 286 ~-----~l~~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~----~~~~l~~l-~~L~~L~Ls~N~l 349 (973)
. ..++|+.|++++|.++. .+...+..+++|+.+++++|.++.. ....+... +.|+.||+.+|.+
T Consensus 242 ~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 242 ASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 2 23678888888887762 2223445556777777777777744 33333334 5677777776653
No 441
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.75 E-value=5.3e-20 Score=203.93 Aligned_cols=107 Identities=18% Similarity=0.203 Sum_probs=53.9
Q ss_pred EEeccCcccC-CccccccccccccceEEccCCcCCCC---CCcccccCCCCCCEEEcccccCCC------CCChhhhccC
Q 002063 148 IFDLSINYFT-GRFPRWVVNLTQLVSLSIGDNVYDEA---EIPESIGNLKNLTYLFLAHCNLRG------RIPESISELR 217 (973)
Q Consensus 148 ~L~Ls~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~---~ip~~~~~l~~L~~L~L~~n~l~~------~~p~~l~~l~ 217 (973)
.|+|+.+.++ ......+..+++|++|+++++.++.. .++..+...++|++|+++++.+.+ .++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4667777766 33444455566666666666665321 233444555556666666665542 1222344444
Q ss_pred CCCeeeccccccccccchhhhcccc---ccEEEeecccCC
Q 002063 218 ELGTLDICRNKISGEFPRSIRKLQK---LWKIELYANNLT 254 (973)
Q Consensus 218 ~L~~L~L~~n~l~~~~p~~l~~l~~---L~~L~L~~n~l~ 254 (973)
+|+.|++++|.+.+..+..+..+.+ |++|++++|+++
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~ 121 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLG 121 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccc
Confidence 5555555555554434444433333 444444444444
No 442
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.74 E-value=8.6e-18 Score=186.30 Aligned_cols=218 Identities=25% Similarity=0.409 Sum_probs=165.2
Q ss_pred HHhcCCCceeeEeEEEEeCCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecC
Q 002063 725 LGKIRHRNILKLYACLLKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRD 804 (973)
Q Consensus 725 l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~D 804 (973)
|+.+.|.|+.++++.+.++...+.|.+||..|+|.|.+.. ....++|.....++.+++.||+|+|. +.-..|+.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~----~~~~~d~~F~~s~~rdi~~Gl~ylh~--s~i~~hg~ 74 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN----EDIKLDYFFILSFIRDISKGLAYLHN--SPIGYHGA 74 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc----cccCccHHHHHHHHHHHHHHHHHHhc--Ccceeeee
Confidence 3567899999999999999999999999999999999986 35678999999999999999999995 33338999
Q ss_pred CCCCCeeecCCCceEEecccCCccccCCCCcccccccCcccccccccccccCC-------CCccchHHHHHHHHHHHHhC
Q 002063 805 IKSSNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCK-------VSEKSDVFSFGVVLLELVTG 877 (973)
Q Consensus 805 lkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~DvwslG~~l~ell~g 877 (973)
+++.|.+++....+|++|||+.................-..-|.|||.+++.. .+.+.||||+|++++|+++.
T Consensus 75 l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r 154 (484)
T KOG1023|consen 75 LKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFR 154 (484)
T ss_pred eccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhc
Confidence 99999999999999999999987664311112222223346799999987541 45679999999999999999
Q ss_pred CCCCCcccCCCc--cHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 878 RKPVEEEYGDGK--DIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 878 ~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
+.||+....... .+...++. .. ...+.+...... +..+.+..++..||..+|++||++.+|-..++.+..
T Consensus 155 ~~~~~~~~~~~~~~eii~~~~~---~~---~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 155 SGPFDLRNLVEDPDEIILRVKK---GG---SNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred cCccccccccCChHHHHHHHHh---cC---CCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 999987543333 33333333 01 111122221111 333468899999999999999999999888877655
Q ss_pred C
Q 002063 956 C 956 (973)
Q Consensus 956 ~ 956 (973)
.
T Consensus 227 ~ 227 (484)
T KOG1023|consen 227 G 227 (484)
T ss_pred c
Confidence 3
No 443
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.72 E-value=1.9e-17 Score=196.00 Aligned_cols=195 Identities=21% Similarity=0.247 Sum_probs=157.4
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcC---CCceeeEeEEEEeCCeeEEEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIR---HRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~---hpniv~l~~~~~~~~~~~lv~e 751 (973)
-..|.+.+.||+|+||+||+|...+ |+.||+|+-+...-.+ |.=-.+++.|++ -+.|+.+..++.-.+..++|+|
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE-fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~e 774 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE-FYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSE 774 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCcee-eeehHHHHHhhchhhhcchHHHHHHHccCCcceeeee
Confidence 4568889999999999999999988 9999999876543221 222234445554 2345555555566777899999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC-------CCceEEeccc
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE-------DYEPKIADFG 824 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~-------~~~~kl~Dfg 824 (973)
|.+.|+|.+++. ....++|.-++.++.|++..+++|| ..+|||+||||+|.++.. ...++|+|||
T Consensus 775 y~~~Gtlld~~N-----~~~~m~e~lv~~~~~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG 846 (974)
T KOG1166|consen 775 YSPYGTLLDLIN-----TNKVMDEYLVMFFSCQMLRIVEHLH---AMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFG 846 (974)
T ss_pred ccccccHHHhhc-----cCCCCCchhhhHHHHHHHHHHHHHH---hcceecccCCcceeEeecccCCCCcccceEEEecc
Confidence 999999999997 3456899999999999999999999 889999999999999952 3458999999
Q ss_pred CCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCC
Q 002063 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRK 879 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~ 879 (973)
.+..+.--.........++|-.+-.+|+..|+.++.++|-|.++.+++-|++|++
T Consensus 847 ~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 847 RSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred cceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 9977653333345666788999999999999999999999999999999999954
No 444
>PRK10345 hypothetical protein; Provisional
Probab=99.71 E-value=9.8e-17 Score=162.52 Aligned_cols=134 Identities=18% Similarity=0.269 Sum_probs=104.4
Q ss_pred cccCeecccCcEEEEEEEEcCCCceEEEEEeecc--ccHHHHHHHHHHHHhc-----CCCceeeEeEEEEeCC---eeE-
Q 002063 679 EEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKI-----RHRNILKLYACLLKGG---SSF- 747 (973)
Q Consensus 679 ~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l-----~hpniv~l~~~~~~~~---~~~- 747 (973)
.-.+.||+|+||.||. ++.++.. +||++... ...+.+.+|+++++.+ +||||++++++++++. .++
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 4457899999999995 6665555 69987652 3456789999999999 5799999999998763 434
Q ss_pred EEEEc--cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHH-hHhhhcCCCCeEecCCCCCCeeecC----CCceEE
Q 002063 748 LVLEY--MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGI-AYLHHDCSPPIIHRDIKSSNILLDE----DYEPKI 820 (973)
Q Consensus 748 lv~e~--~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l-~~LH~~~~~~ivH~Dlkp~Nill~~----~~~~kl 820 (973)
+|+|| +++|+|.+++.+. .++.. ..++.|++.++ +||| +++|+||||||+||+++. ++.++|
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~------~~~e~--~~~~~~~L~~l~~yLh---~~~IvhrDlKp~NILl~~~~~~~~~~~L 150 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQC------RYEED--VAQLRQLLKKLKRYLL---DNRIVTMELKPQNILCQRISESEVIPVV 150 (210)
T ss_pred EEecCCCCcchhHHHHHHcc------cccHh--HHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEeccCCCCCcEEE
Confidence 78999 5579999999642 23433 35567778777 9999 789999999999999974 337999
Q ss_pred ecccCC
Q 002063 821 ADFGVA 826 (973)
Q Consensus 821 ~Dfgl~ 826 (973)
+||+.+
T Consensus 151 iDg~G~ 156 (210)
T PRK10345 151 CDNIGE 156 (210)
T ss_pred EECCCC
Confidence 995433
No 445
>smart00090 RIO RIO-like kinase.
Probab=99.68 E-value=2.2e-16 Score=164.44 Aligned_cols=141 Identities=19% Similarity=0.180 Sum_probs=108.8
Q ss_pred CcccCeecccCcEEEEEEE-EcCCCceEEEEEeecccc--------------------------HHHHHHHHHHHHhcCC
Q 002063 678 LEEDNLIGSGGTGKVYRLD-LKKNAGTVAVKQLWKGDG--------------------------VKVFAAEMEILGKIRH 730 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~-~~~~~~~vavK~~~~~~~--------------------------~~~~~~E~~~l~~l~h 730 (973)
|++.+.||+|+||.||+|. +..+|+.||||++..... ...+.+|++.++++.+
T Consensus 30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~ 109 (237)
T smart00090 30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE 109 (237)
T ss_pred HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 6778899999999999998 666799999998864210 1235679999999975
Q ss_pred Cc--eeeEeEEEEeCCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCC-eEecCCCC
Q 002063 731 RN--ILKLYACLLKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPP-IIHRDIKS 807 (973)
Q Consensus 731 pn--iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~-ivH~Dlkp 807 (973)
.. +.+++++ . ..++||||++++++...... ...........++.|++.+++++| ..+ ++||||||
T Consensus 110 ~~i~~p~~~~~---~-~~~lV~E~~~g~~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~LH---~~g~iiH~Dikp 177 (237)
T smart00090 110 AGVPVPKPIAW---R-RNVLVMEFIGGDGLPAPRLK-----DVEPEEEEEFELYDDILEEMRKLY---KEGELVHGDLSE 177 (237)
T ss_pred cCCCCCeeeEe---c-CceEEEEEecCCcccccccc-----cCCcchHHHHHHHHHHHHHHHHHH---hcCCEEeCCCCh
Confidence 33 3333432 2 35899999999887665421 123445566789999999999999 788 99999999
Q ss_pred CCeeecCCCceEEecccCCccccC
Q 002063 808 SNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 808 ~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
+||+++ ++.++++|||.+...++
T Consensus 178 ~NIli~-~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 178 YNILVH-DGKVVIIDVSQSVELDH 200 (237)
T ss_pred hhEEEE-CCCEEEEEChhhhccCC
Confidence 999999 88999999998875443
No 446
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.64 E-value=9.3e-17 Score=173.98 Aligned_cols=176 Identities=24% Similarity=0.325 Sum_probs=131.6
Q ss_pred CeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecc
Q 002063 744 GSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADF 823 (973)
Q Consensus 744 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 823 (973)
.+.|+.|++|+..+|.+|+..+. .....++.....++.|++.|++| ++.+|||+||.||+...+.++||+||
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~--~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDF 400 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRR--TGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDF 400 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCC--cccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhh
Confidence 35789999999999999997542 33446788889999999999999 47899999999999999999999999
Q ss_pred cCCccccCCC----CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHh
Q 002063 824 GVAKIAENSP----KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTH 898 (973)
Q Consensus 824 gl~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~ 898 (973)
|+........ ....++...||..||+||.+.+..|+.++||||||++++|++. -..+|+.. +.
T Consensus 401 gl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~-----------~t- 468 (516)
T KOG1033|consen 401 GLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI-----------AT- 468 (516)
T ss_pred hheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH-----------Hh-
Confidence 9998765443 2234556789999999999999999999999999999999997 22333211 00
Q ss_pred hcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHH
Q 002063 899 LNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREV 946 (973)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~ev 946 (973)
...+-+..+.+....+++ .=..++.+++.+.|.+||++.++
T Consensus 469 ------~~d~r~g~ip~~~~~d~p-~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 469 ------LTDIRDGIIPPEFLQDYP-EEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred ------hhhhhcCCCChHHhhcCc-HHHHHHHHhcCCCcccCchHHHH
Confidence 111112222222222222 23468889999999999955444
No 447
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.63 E-value=2e-16 Score=182.80 Aligned_cols=214 Identities=22% Similarity=0.257 Sum_probs=142.8
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
.+|+.++.|..|+||.||.++++.+.+.+|+| +.+..... ++ ++.....|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~lil--Rn---ilt~a~npfvv--------------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNLIL--RN---ILTFAGNPFVV--------------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhc-ccccchhh--hc---cccccCCccee---------------------
Confidence 47888999999999999999999999999995 44332211 11 33333444444
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCC-
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK- 834 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~- 834 (973)
|+=...++. .+.++. +++.+++|+| +.+|+|||+||+|.+|+.-|++|++|||+++.-.....
T Consensus 136 gDc~tllk~-----~g~lPv--------dmvla~Eylh---~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at 199 (1205)
T KOG0606|consen 136 GDCATLLKN-----IGPLPV--------DMVLAVEYLH---SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT 199 (1205)
T ss_pred chhhhhccc-----CCCCcc--------hhhHHhHhhc---cCCeecCCCCCCcceeeecccccccchhhhhhhhhhccc
Confidence 222222222 112222 2377899999 89999999999999999999999999999864211100
Q ss_pred ------------cccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccc
Q 002063 835 ------------VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH 902 (973)
Q Consensus 835 ------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~ 902 (973)
.......+||+.|+|||++....|...+|+|++|+++||.+.|..||.++. ....+...+...
T Consensus 200 nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdt-----peelfg~visd~ 274 (1205)
T KOG0606|consen 200 NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT-----PEELFGQVISDD 274 (1205)
T ss_pred hhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCC-----HHHHHhhhhhhh
Confidence 001112479999999999999999999999999999999999999997652 112222221111
Q ss_pred ccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHH
Q 002063 903 ENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREV 946 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~ev 946 (973)
... .+.......+..+++...++.+|..|--....
T Consensus 275 i~w---------pE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga 309 (1205)
T KOG0606|consen 275 IEW---------PEEDEALPPEAQDLIEQLLRQNPLCRLGTGGA 309 (1205)
T ss_pred ccc---------cccCcCCCHHHHHHHHHHHHhChHhhcccchh
Confidence 111 01112223345667777888999999644433
No 448
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.63 E-value=2.5e-15 Score=155.46 Aligned_cols=132 Identities=20% Similarity=0.301 Sum_probs=111.4
Q ss_pred CeecccCcEEEEEEEEcCCCceEEEEEeeccc----------cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----------GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~----------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
+.||+|++|.||+|.. .+..|+||+..... ....+.+|++++..+.|+++.....++...+..++|||
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e 79 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVME 79 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEE
Confidence 5789999999999987 36789999754311 12356789999999999998888777777788899999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
|++|++|.+++... .+ .+..++.+++.++.++| +.+++|||++|.||+++ ++.++++|||.+..
T Consensus 80 ~~~G~~L~~~~~~~--------~~-~~~~i~~~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 80 YIEGEPLKDLINSN--------GM-EELELSREIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EeCCcCHHHHHHhc--------cH-HHHHHHHHHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999988642 12 77889999999999999 78999999999999999 78999999998763
No 449
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.62 E-value=3e-15 Score=153.27 Aligned_cols=128 Identities=20% Similarity=0.287 Sum_probs=105.0
Q ss_pred eecccCcEEEEEEEEcCCCceEEEEEeecc----c------cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 683 LIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----D------GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 683 ~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
.||+|+||+||+|... +..|++|+.... . ...++.+|+++++.++|+++.....++......++||||
T Consensus 1 ~ig~G~~~~vy~~~~~--~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFL--GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEeecC--CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence 3799999999999854 678999975431 0 124567899999999988766665556667778999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
++|++|.+++.... . .++.+++.++.++| +.+++|||++|.||+++ ++.+++.|||.+..
T Consensus 79 ~~g~~l~~~~~~~~------~------~~~~~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 79 IEGKPLKDVIEEGN------D------ELLREIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred ECCccHHHHHhhcH------H------HHHHHHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999998875420 0 77899999999999 78999999999999999 88999999998864
No 450
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.61 E-value=5.7e-15 Score=174.02 Aligned_cols=135 Identities=21% Similarity=0.286 Sum_probs=110.3
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEee-c---c------ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCC
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLW-K---G------DGVKVFAAEMEILGKIRHRNILKLYACLLKGG 744 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~-~---~------~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 744 (973)
...|...+.||+|+||+||+|.+... .+++|+.. + . ...+++.+|+++++.++|++++....++..+.
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~ 409 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE 409 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC
Confidence 34556789999999999999988643 34444321 1 1 12345788999999999999998888777777
Q ss_pred eeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEeccc
Q 002063 745 SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFG 824 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 824 (973)
..++||||+++++|.+++. ....++.+++++++++| +.+++|||+||+||++ .++.++|+|||
T Consensus 410 ~~~lv~E~~~g~~L~~~l~-------------~~~~~~~~i~~~L~~lH---~~giiHrDlkp~NILl-~~~~~~liDFG 472 (535)
T PRK09605 410 EKTIVMEYIGGKDLKDVLE-------------GNPELVRKVGEIVAKLH---KAGIVHGDLTTSNFIV-RDDRLYLIDFG 472 (535)
T ss_pred CCEEEEEecCCCcHHHHHH-------------HHHHHHHHHHHHHHHHH---hCCCccCCCChHHEEE-ECCcEEEEeCc
Confidence 8899999999999988875 23568899999999999 7899999999999999 67899999999
Q ss_pred CCcc
Q 002063 825 VAKI 828 (973)
Q Consensus 825 l~~~ 828 (973)
+++.
T Consensus 473 la~~ 476 (535)
T PRK09605 473 LGKY 476 (535)
T ss_pred cccc
Confidence 9874
No 451
>PLN03150 hypothetical protein; Provisional
Probab=99.61 E-value=2.7e-15 Score=178.30 Aligned_cols=148 Identities=30% Similarity=0.464 Sum_probs=123.8
Q ss_pred chHHHHHHHHHHHhcCCCcccccCCCCCCCC---CCCcceeeeCC--CC--CceEEEeecCCCCCccccccccCCCCCcE
Q 002063 29 LNVETQALIQFKSKLKDPHGVLDSWKESADS---PCGFSGITCDS--VT--GRVTEISFDNKSLSGEISSSISALQSLTV 101 (973)
Q Consensus 29 ~~~~~~aLl~~k~~~~d~~~~l~~W~~~~~~---~c~w~gv~C~~--~~--~~v~~l~l~~~~l~~~~~~~l~~l~~L~~ 101 (973)
...|.+||++||+++.+|.. .+|+++ +| +|.|.||.|+. .. .+|+.|+|++++++|.+|+.++.|++|+.
T Consensus 370 ~~~~~~aL~~~k~~~~~~~~--~~W~g~-~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~~L~~ 446 (623)
T PLN03150 370 LLEEVSALQTLKSSLGLPLR--FGWNGD-PCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQS 446 (623)
T ss_pred CchHHHHHHHHHHhcCCccc--CCCCCC-CCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCCCCCE
Confidence 46799999999999987653 589753 22 12799999953 22 36999999999999999999999999999
Q ss_pred EeCCCCcccCccCccccCCCCCcEEEecCCcccCCCCC-cCCCCCCCEEeccCcccCCccccccccc-cccceEEccCCc
Q 002063 102 LSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPD-LSALKNLEIFDLSINYFTGRFPRWVVNL-TQLVSLSIGDNV 179 (973)
Q Consensus 102 L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~~~~l-~~L~~L~l~~n~ 179 (973)
|+|++|.++|.+|..++.+++|+.|+|++|++++.+|. ++++++|+.|+|++|.++|.+|..+..+ .++..+++.+|.
T Consensus 447 L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~ 526 (623)
T PLN03150 447 INLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNA 526 (623)
T ss_pred EECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEecCCc
Confidence 99999999999999999999999999999999987775 8999999999999999999888877653 355566666664
No 452
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.61 E-value=3.2e-15 Score=152.65 Aligned_cols=134 Identities=22% Similarity=0.188 Sum_probs=105.3
Q ss_pred CcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc------------------------cHHHHHHHHHHHHhcCCCc-
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD------------------------GVKVFAAEMEILGKIRHRN- 732 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~------------------------~~~~~~~E~~~l~~l~hpn- 732 (973)
|.+.+.||+|+||.||+|... +|+.||||++.... ......+|+.++..+.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 677889999999999999886 58999999865421 0113567888899888774
Q ss_pred -eeeEeEEEEeCCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCee
Q 002063 733 -ILKLYACLLKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNIL 811 (973)
Q Consensus 733 -iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nil 811 (973)
+.+.++ ....++||||+++++|.+.... .....++.+++.++.++| ..+++||||+|.||+
T Consensus 96 ~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~-----------~~~~~~~~~i~~~l~~lh---~~gi~H~Dl~p~Nil 157 (198)
T cd05144 96 PVPKPID----WNRHAVVMEYIDGVELYRVRVL-----------EDPEEVLDEILEEIVKAY---KHGIIHGDLSEFNIL 157 (198)
T ss_pred CCCceee----cCCceEEEEEeCCcchhhcccc-----------ccHHHHHHHHHHHHHHHH---HCCCCcCCCCcccEE
Confidence 344433 2456899999999988654320 234568889999999999 789999999999999
Q ss_pred ecCCCceEEecccCCcccc
Q 002063 812 LDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 812 l~~~~~~kl~Dfgl~~~~~ 830 (973)
+++++.++|+|||.+....
T Consensus 158 l~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 158 VDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred EcCCCcEEEEECCccccCC
Confidence 9999999999999986553
No 453
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.52 E-value=7.9e-14 Score=135.91 Aligned_cols=135 Identities=24% Similarity=0.212 Sum_probs=112.6
Q ss_pred ccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCC--CceeeEeEEEEeCCeeEEEEEccCCCc
Q 002063 680 EDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRH--RNILKLYACLLKGGSSFLVLEYMPNGN 757 (973)
Q Consensus 680 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h--pniv~l~~~~~~~~~~~lv~e~~~~gs 757 (973)
+.+.||+|.++.||++...+ ..+++|..........+.+|+..++.++| +++.+++.+...++..+++|||++++.
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~ 79 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET 79 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence 35679999999999999864 68999987665445678899999999976 588899988888788999999998876
Q ss_pred hHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 758 LFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 758 L~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
+..+ +......++.+++++++++|.....+++|+|++|.||+++.++.+++.|||.+..
T Consensus 80 ~~~~------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 80 LDEV------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cccC------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 6432 4456667889999999999953335799999999999999989999999998863
No 454
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.50 E-value=1.3e-13 Score=139.74 Aligned_cols=134 Identities=22% Similarity=0.210 Sum_probs=95.8
Q ss_pred cCeecccCcEEEEEEEEcCCCceEEEEEeecccc----HHH----------------------HHHHHHHHHhcCCCc--
Q 002063 681 DNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDG----VKV----------------------FAAEMEILGKIRHRN-- 732 (973)
Q Consensus 681 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~----~~~----------------------~~~E~~~l~~l~hpn-- 732 (973)
.+.||+|+||+||+|.+. +++.||||++..... ... ...|.+.+.++.+..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 467999999999999987 688999998765211 111 134555566654432
Q ss_pred eeeEeEEEEeCCeeEEEEEccCCCchHH-HHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCC-CCeEecCCCCCCe
Q 002063 733 ILKLYACLLKGGSSFLVLEYMPNGNLFQ-ALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCS-PPIIHRDIKSSNI 810 (973)
Q Consensus 733 iv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~-~~ivH~Dlkp~Ni 810 (973)
+.+.+++ ...++||||++++.+.. .+... . .. .....++.+++.++.++| . .+++||||||+||
T Consensus 81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~-~-----~~-~~~~~~~~~~~~~l~~lh---~~~~ivH~Dl~p~Ni 146 (187)
T cd05119 81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDV-R-----LL-EDPEELYDQILELMRKLY---REAGLVHGDLSEYNI 146 (187)
T ss_pred CCceEec----CCCEEEEEEeCCCCccChhhhhh-h-----hc-ccHHHHHHHHHHHHHHHh---hccCcCcCCCChhhE
Confidence 3334432 24589999999854421 12211 0 01 456788999999999999 5 8999999999999
Q ss_pred eecCCCceEEecccCCcccc
Q 002063 811 LLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 811 ll~~~~~~kl~Dfgl~~~~~ 830 (973)
+++ ++.++++|||.+....
T Consensus 147 li~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 147 LVD-DGKVYIIDVPQAVEID 165 (187)
T ss_pred EEE-CCcEEEEECccccccc
Confidence 999 8999999999987543
No 455
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.49 E-value=1.7e-15 Score=176.97 Aligned_cols=257 Identities=24% Similarity=0.254 Sum_probs=192.1
Q ss_pred hcCCcccCeecccCcEEEEEEEEcC-CCceEEEEEeecc----ccHHHHHHHHHHHHhcC-CCceeeEeEEEEeCCeeEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKK-NAGTVAVKQLWKG----DGVKVFAAEMEILGKIR-HRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~-~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~l 748 (973)
...|...+.||+|+|+.|-.+.... ....+|+|.+... ........|..+-+.+. |+|++.+++.....+..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 3467788889999999998887743 3456777766542 23334455777777776 9999999999999999999
Q ss_pred EEEccCCCchHHHH-HhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCC-ceEEecccCC
Q 002063 749 VLEYMPNGNLFQAL-HKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY-EPKIADFGVA 826 (973)
Q Consensus 749 v~e~~~~gsL~~~l-~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfgl~ 826 (973)
+++|.+++++.+-+ +.. ....+....-.+..|+..++.|+|. ..++.|||+||+|.+++..+ ..++.|||+|
T Consensus 99 ~~~~s~g~~~f~~i~~~~----~~~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~df~~A 172 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPD----STGTSSSSASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIADFGLA 172 (601)
T ss_pred ccCcccccccccccccCC----ccCCCCcchhhhhhhhccCccccCc--ccccccCCCCCccchhccCCCcccCCCchhh
Confidence 99999999998877 321 1133444556788999999999996 46899999999999999999 9999999999
Q ss_pred ccccC-CCCcccccccCc-ccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccc
Q 002063 827 KIAEN-SPKVSDYSCFAG-THGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE 903 (973)
Q Consensus 827 ~~~~~-~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 903 (973)
..+.. ...........| ++.|+|||...+. ...+..|+||.|+++..+++|..||+.......+...|......
T Consensus 173 t~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--- 249 (601)
T KOG0590|consen 173 TAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGR--- 249 (601)
T ss_pred ccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccc---
Confidence 98876 444444455677 9999999998875 44578999999999999999999998765444333333222100
Q ss_pred cchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 904 NVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
..............++..+++..+|..|.+.+++...
T Consensus 250 ---------~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d 286 (601)
T KOG0590|consen 250 ---------FTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLD 286 (601)
T ss_pred ---------cccCccccCChhhhhcccccccCCchhcccccccccc
Confidence 0011122233345677778888999999999988544
No 456
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.48 E-value=2.9e-13 Score=141.37 Aligned_cols=133 Identities=20% Similarity=0.276 Sum_probs=103.4
Q ss_pred cCeec-ccCcEEEEEEEEcCCCceEEEEEeecc---------------ccHHHHHHHHHHHHhcCCCce--eeEeEEEEe
Q 002063 681 DNLIG-SGGTGKVYRLDLKKNAGTVAVKQLWKG---------------DGVKVFAAEMEILGKIRHRNI--LKLYACLLK 742 (973)
Q Consensus 681 ~~~lG-~G~~g~Vy~a~~~~~~~~vavK~~~~~---------------~~~~~~~~E~~~l~~l~hpni--v~l~~~~~~ 742 (973)
...|| .|+.|+||.++.. +..+|||.+... .....+.+|++++.+++|+++ .+.+++...
T Consensus 36 ~~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV 113 (239)
T ss_pred CceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence 45688 8999999999876 678999977431 123457789999999998775 666766443
Q ss_pred C-C---eeEEEEEccCC-CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCc
Q 002063 743 G-G---SSFLVLEYMPN-GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE 817 (973)
Q Consensus 743 ~-~---~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 817 (973)
+ . ..++||||+++ .+|.+++... .++.. .+.++++++.++| +.||+||||||.|||++.++.
T Consensus 114 ~~~~~~~~~lV~e~l~G~~~L~~~l~~~------~l~~~----~~~~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~~ 180 (239)
T PRK01723 114 RHGLFYRADILIERIEGARDLVALLQEA------PLSEE----QWQAIGQLIARFH---DAGVYHADLNAHNILLDPDGK 180 (239)
T ss_pred ecCcceeeeEEEEecCCCCCHHHHHhcC------CCCHH----HHHHHHHHHHHHH---HCCCCCCCCCchhEEEcCCCC
Confidence 2 2 23599999997 6898887532 23332 3578999999999 889999999999999999999
Q ss_pred eEEecccCCcc
Q 002063 818 PKIADFGVAKI 828 (973)
Q Consensus 818 ~kl~Dfgl~~~ 828 (973)
++++|||.+..
T Consensus 181 v~LIDfg~~~~ 191 (239)
T PRK01723 181 FWLIDFDRGEL 191 (239)
T ss_pred EEEEECCCccc
Confidence 99999998764
No 457
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.44 E-value=1.9e-13 Score=155.96 Aligned_cols=198 Identities=30% Similarity=0.509 Sum_probs=100.2
Q ss_pred EEEecCCcccCCCCCcCCCCCCCEEeccCcccCCcccccccccc-ccceEEccCCcCCCCCCcccccCCCCCCEEEcccc
Q 002063 125 VLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLT-QLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHC 203 (973)
Q Consensus 125 ~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n 203 (973)
.|++..|.+...+..+..++.++.|++.+|.++ .++.....+. +|+.|++++|.+. .+|..++.+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~--~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE--SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh--hhhhhhhccccccccccCCc
Confidence 466666666555555555566666666666665 3444444442 5555555555443 22334444455555555555
Q ss_pred cCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEeeccccccccCC
Q 002063 204 NLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPE 283 (973)
Q Consensus 204 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~ 283 (973)
+++ .+|...+.+++|+.|++++|+++ .+|.....+..|++|++++|.+. ..+.
T Consensus 174 ~l~-------------------------~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~ 226 (394)
T COG4886 174 DLS-------------------------DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLS 226 (394)
T ss_pred hhh-------------------------hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecch
Confidence 554 33433334444444455555444 34433334444555555555322 3444
Q ss_pred ccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCccccccccccccccccccccccCCh
Q 002063 284 EIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPK 355 (973)
Q Consensus 284 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~ 355 (973)
.+.++.++..+.+.+|++.. ++..++.+++++.|++++|+++...+ ++.+.+|+.|++++|.+....|.
T Consensus 227 ~~~~~~~l~~l~l~~n~~~~-~~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 227 SLSNLKNLSGLELSNNKLED-LPESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred hhhhcccccccccCCceeee-ccchhccccccceecccccccccccc--ccccCccCEEeccCccccccchh
Confidence 44555555555555555442 24445555555555555555553222 55566666666666666544443
No 458
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.43 E-value=1.8e-14 Score=156.00 Aligned_cols=179 Identities=31% Similarity=0.550 Sum_probs=127.7
Q ss_pred ccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccCCCCcceEeccC
Q 002063 339 LTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGD 418 (973)
Q Consensus 339 L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 418 (973)
-...||+.|++. ++|..+|.+-. ++.+.++.|....+|..+.++..|++|||+.|+++ ..|..++.+
T Consensus 77 t~~aDlsrNR~~-elp~~~~~f~~-Le~liLy~n~~r~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~l---------- 143 (722)
T KOG0532|consen 77 TVFADLSRNRFS-ELPEEACAFVS-LESLILYHNCIRTIPEAICNLEALTFLDLSSNQLS-HLPDGLCDL---------- 143 (722)
T ss_pred hhhhhccccccc-cCchHHHHHHH-HHHHHHHhccceecchhhhhhhHHHHhhhccchhh-cCChhhhcC----------
Confidence 345778888887 66666555443 22233333333344444555555555555555554 344444333
Q ss_pred CcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCC
Q 002063 419 NDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIP 498 (973)
Q Consensus 419 N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 498 (973)
-|+.|.+++|+++ .+|..++.+..|..||.+.|++. .+|..++++.+|+.|.+..|++. .+|
T Consensus 144 ---------------pLkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp 205 (722)
T KOG0532|consen 144 ---------------PLKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLP 205 (722)
T ss_pred ---------------cceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCC
Confidence 2788888888888 78888888888899999999987 67778888899999999999888 567
Q ss_pred ccccCccccchhhccccccccCCCccccccCCCCeeecCCCccCCCCCchhhc
Q 002063 499 NEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMK 551 (973)
Q Consensus 499 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 551 (973)
.++. .-.|..||+|.|+++ .+|..|.+|+.|++|-|.+|.|+ .+|..+..
T Consensus 206 ~El~-~LpLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~ 255 (722)
T KOG0532|consen 206 EELC-SLPLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICE 255 (722)
T ss_pred HHHh-CCceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC-CChHHHHh
Confidence 7777 457888999999998 88999999999999999999998 77776644
No 459
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.43 E-value=8.2e-15 Score=158.59 Aligned_cols=151 Identities=30% Similarity=0.462 Sum_probs=76.9
Q ss_pred CCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEE
Q 002063 192 LKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFD 271 (973)
Q Consensus 192 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 271 (973)
+..-...+|+.|++. .+|..+..+..|+.|.|.+|.|. .+|..++++..|++|+|+.|+++ .+|..++.|+ |+.|-
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLI 149 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEE
Confidence 344445555555555 55555555555555555555555 45555555555555555555555 4455555444 55555
Q ss_pred eeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCcccccccccccccccccccc
Q 002063 272 ISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFS 350 (973)
Q Consensus 272 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~ 350 (973)
+++|+++ .+|+.++.+..|..|+.+.|++. .+|..++++.+|+.|.+..|++. .+|+.+.. -.|..||+|.|++.
T Consensus 150 ~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~-LpLi~lDfScNkis 224 (722)
T KOG0532|consen 150 VSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCS-LPLIRLDFSCNKIS 224 (722)
T ss_pred EecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhC-CceeeeecccCcee
Confidence 5555554 45555555555555555555554 34444444444444444444444 23333332 22444444444444
No 460
>PLN03150 hypothetical protein; Provisional
Probab=99.42 E-value=2.5e-13 Score=161.51 Aligned_cols=93 Identities=40% Similarity=0.676 Sum_probs=62.8
Q ss_pred CCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCC
Q 002063 459 LERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSG 538 (973)
Q Consensus 459 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 538 (973)
++.|+|++|.++|.+|..+..+++|+.|+|++|+++|.+|..++.+++|+.|+|++|+++|.+|..++.+++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 55666666666666666666666666666666666666666666666666666666666666666677777777777777
Q ss_pred CccCCCCCchhhc
Q 002063 539 NKLTGSIPDNLMK 551 (973)
Q Consensus 539 N~l~~~~p~~~~~ 551 (973)
|+++|.+|..+..
T Consensus 500 N~l~g~iP~~l~~ 512 (623)
T PLN03150 500 NSLSGRVPAALGG 512 (623)
T ss_pred CcccccCChHHhh
Confidence 7777777766544
No 461
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.39 E-value=4.2e-13 Score=153.04 Aligned_cols=158 Identities=34% Similarity=0.541 Sum_probs=109.6
Q ss_pred ccccCCCCCCEEEcccccCCCCCChhhhccC-CCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccc
Q 002063 187 ESIGNLKNLTYLFLAHCNLRGRIPESISELR-ELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLT 265 (973)
Q Consensus 187 ~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~ 265 (973)
..+..++.++.|++.+|.++ .++.....++ +|+.|++++|++. .+|..++.+++|+.|++++|+++ .+|...+.++
T Consensus 110 ~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~ 186 (394)
T COG4886 110 SELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLS 186 (394)
T ss_pred hhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhh
Confidence 34445567777777777777 5666666664 8888888888887 66677788888888888888888 5666555778
Q ss_pred cccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCccccccccccccccc
Q 002063 266 LLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDIS 345 (973)
Q Consensus 266 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls 345 (973)
+|+.|++++|++. .+|..+..+..|+.|.+++|++. ..+..+..+.++..+.+.+|++. ..+..++.+++++.|+++
T Consensus 187 ~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s 263 (394)
T COG4886 187 NLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLS 263 (394)
T ss_pred hhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccchhccccccceeccc
Confidence 8888888888887 66766656666777777777543 34555666666666666666665 235555556666666666
Q ss_pred ccccc
Q 002063 346 ENQFS 350 (973)
Q Consensus 346 ~N~l~ 350 (973)
+|+++
T Consensus 264 ~n~i~ 268 (394)
T COG4886 264 NNQIS 268 (394)
T ss_pred ccccc
Confidence 66665
No 462
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.32 E-value=1.7e-11 Score=137.19 Aligned_cols=168 Identities=18% Similarity=0.224 Sum_probs=131.9
Q ss_pred EEEEcCCCceEEEEEeecccc--HHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCCchHHHHHhhhcCCCC
Q 002063 694 RLDLKKNAGTVAVKQLWKGDG--VKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNGNLFQALHKRVKEGKP 771 (973)
Q Consensus 694 ~a~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~ 771 (973)
.|..+.++.+|.|+..+.... .+...+.++.++.++||||+++++.++.++..|+|+|.+. .|..++.+.
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l------ 101 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKEL------ 101 (690)
T ss_pred ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHh------
Confidence 466777788999998776444 5567888999999999999999999999999999999984 688888764
Q ss_pred CcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcccccccCccccccccc
Q 002063 772 ELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPE 851 (973)
Q Consensus 772 ~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE 851 (973)
....+..-+.||+.||.|||+ +.+++|++|....|+|++.|+.||++|.++........ .....+--..|..|+
T Consensus 102 --~~~~v~~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~ 175 (690)
T KOG1243|consen 102 --GKEEVCLGLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPE 175 (690)
T ss_pred --HHHHHHHHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChh
Confidence 245667788999999999997 45899999999999999999999999998865543221 111112223466777
Q ss_pred ccccCCCCccchHHHHHHHHHHHHhC
Q 002063 852 LAYTCKVSEKSDVFSFGVVLLELVTG 877 (973)
Q Consensus 852 ~~~~~~~~~~~DvwslG~~l~ell~g 877 (973)
.+.... -..|.|-|||++||++.|
T Consensus 176 ~~~~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 176 EIDPSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred hcCccc--cchhhhhHHHHHHHHhCc
Confidence 543222 346999999999999999
No 463
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.30 E-value=1.3e-11 Score=140.27 Aligned_cols=142 Identities=20% Similarity=0.202 Sum_probs=99.1
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHH---------------------------------------
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVK--------------------------------------- 716 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~--------------------------------------- 716 (973)
..|+ .+.||.|++|.||+|+.+. |+.||||+.++.. .+
T Consensus 118 ~~fd-~~plasaSigQVh~A~l~~-G~~VaVKv~rp~i-~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l 194 (437)
T TIGR01982 118 AEFE-EKPLAAASIAQVHRARLVD-GKEVAVKVLRPGI-EKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTL 194 (437)
T ss_pred hhCC-CcceeeeehhheEEEEecC-CCEEEEEeeCCCc-HHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHH
Confidence 3344 3689999999999999874 8999999875421 00
Q ss_pred ----HHHHHHHHHHhcC-----CCceeeEeEEEEeCCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHH
Q 002063 717 ----VFAAEMEILGKIR-----HRNILKLYACLLKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAK 787 (973)
Q Consensus 717 ----~~~~E~~~l~~l~-----hpniv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~ 787 (973)
++.+|++.+.+++ ++++.-..-+....+..++||||++|++|.++..... . ..+ ...++.+++.
T Consensus 195 ~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~-~---~~~---~~~ia~~~~~ 267 (437)
T TIGR01982 195 RRELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE-A---GLD---RKALAENLAR 267 (437)
T ss_pred HHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh-c---CCC---HHHHHHHHHH
Confidence 1334555555542 3443322222233456799999999999988765321 1 112 3345666665
Q ss_pred -HHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 788 -GIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 788 -~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
.+..+| ..|++|+|++|.||+++.++.+++.|||++....
T Consensus 268 ~~l~ql~---~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 268 SFLNQVL---RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHHHHH---hCCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 467788 7899999999999999999999999999987664
No 464
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.27 E-value=4.9e-12 Score=140.70 Aligned_cols=247 Identities=22% Similarity=0.212 Sum_probs=179.5
Q ss_pred CCcccCeecc--cCcEEEEEEEE--cCCCceEEEEEeec----cccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeE
Q 002063 677 NLEEDNLIGS--GGTGKVYRLDL--KKNAGTVAVKQLWK----GDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 677 ~~~~~~~lG~--G~~g~Vy~a~~--~~~~~~vavK~~~~----~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 747 (973)
.+.+...+|. |.+|.||.+.. ..++..+|+|+-+. +....+-.+|+...+++ .|++.++....++..+..|
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4567788999 99999999999 88899999997543 23344446777777777 5999999899999999999
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHH----HHhHhhhcCCCCeEecCCCCCCeeecCC-CceEEec
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAK----GIAYLHHDCSPPIIHRDIKSSNILLDED-YEPKIAD 822 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~----~l~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~D 822 (973)
+-+|++ +.+|.++.+.. ...++....+....+..+ |+.++| ..+++|-|+||.||+...+ ...+++|
T Consensus 195 iqtE~~-~~sl~~~~~~~----~~~~p~~~l~~~~~~~~~~~~~al~~~h---s~~~~~~~~kp~~i~~~~~~~s~~~~d 266 (524)
T KOG0601|consen 195 IQTELC-GESLQSYCHTP----CNFLPDNLLWNSLRDWLSRDVTALSHLH---SNNIVHDDLKPANIFTTSDWTSCKLTD 266 (524)
T ss_pred eeeccc-cchhHHhhhcc----cccCCchhhhhHHhhhhhcccccccccC---CCcccccccchhheecccccceeecCC
Confidence 999999 57888877643 223455566667777777 999999 8899999999999999999 8899999
Q ss_pred ccCCccccCCCCccccc---ccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhh
Q 002063 823 FGVAKIAENSPKVSDYS---CFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHL 899 (973)
Q Consensus 823 fgl~~~~~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~ 899 (973)
||+...+.......... ...|...|++||... +.++.+.|+|++|.+..+..++..+....+.. .|...
T Consensus 267 f~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~-----~W~~~-- 338 (524)
T KOG0601|consen 267 FGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNS-----SWSQL-- 338 (524)
T ss_pred cceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCC-----Ccccc--
Confidence 99998776554222221 124667899999875 45788999999999999999987665432100 11000
Q ss_pred cccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 002063 900 NNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVK 948 (973)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~ 948 (973)
+ +.. ...+.......++...+..|++.+|..|++.+.+..
T Consensus 339 --r----~~~---ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 339 --R----QGY---IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred --c----ccc---CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 0 000 001111112233445777899999999999887754
No 465
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.27 E-value=7.8e-12 Score=127.11 Aligned_cols=208 Identities=24% Similarity=0.283 Sum_probs=141.3
Q ss_pred HHhcCCCceeeEeEEEEeC-----CeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCC
Q 002063 725 LGKIRHRNILKLYACLLKG-----GSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPP 799 (973)
Q Consensus 725 l~~l~hpniv~l~~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ 799 (973)
+-.+.|-|+|++..|+.+. .+..+++|||+.|++..+|++..+. ...+......++..||..||.|||+. +.+
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~-~~a~~~~~wkkw~tqIlsal~yLhs~-~Pp 198 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKN-QKALFQKAWKKWCTQILSALSYLHSC-DPP 198 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHh-hhhhhHHHHHHHHHHHHhhhhhhhcc-CCc
Confidence 4455799999999998653 3468899999999999999876443 34455666778999999999999974 889
Q ss_pred eEecCCCCCCeeecCCCceEEecccCCccc--cCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhC
Q 002063 800 IIHRDIKSSNILLDEDYEPKIADFGVAKIA--ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTG 877 (973)
Q Consensus 800 ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~--~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g 877 (973)
|+|+++.-+-|++..+|-+|++--.-.... -+...........+-++|.|||.=.....+.++|||+||....||..+
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail 278 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL 278 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence 999999999999999998888642211111 011111112234567899999986666677899999999999999887
Q ss_pred CCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 878 RKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 878 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
..--...... -.. ...+...+.. . +.. .=.+++.+|++..|..||+|++++.|.-.+
T Consensus 279 Eiq~tnseS~--~~~---------ee~ia~~i~~-l--en~-----lqr~~i~kcl~~eP~~rp~ar~llfHpllf 335 (458)
T KOG1266|consen 279 EIQSTNSESK--VEV---------EENIANVIIG-L--ENG-----LQRGSITKCLEGEPNGRPDARLLLFHPLLF 335 (458)
T ss_pred eeccCCCcce--eeh---------hhhhhhheee-c--cCc-----cccCcCcccccCCCCCCcchhhhhcCceee
Confidence 5432111000 000 0000000000 0 000 012467789999999999999999886654
No 466
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.23 E-value=9.8e-12 Score=142.45 Aligned_cols=146 Identities=18% Similarity=0.127 Sum_probs=96.0
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecccc------------------------------------HH-
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDG------------------------------------VK- 716 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~------------------------------------~~- 716 (973)
....|+. +.||+|++|.||+|+.+++|+.||||+..+... .+
T Consensus 118 ~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~ 196 (537)
T PRK04750 118 WFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKT 196 (537)
T ss_pred HHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHH
Confidence 3556777 799999999999999998899999999865210 01
Q ss_pred -----HHHHHHHHHHhc----CCCceeeEeEEEEe-CCeeEEEEEccCCCchHHHHHhhhcCC--CCCcCHHHHHHHHHH
Q 002063 717 -----VFAAEMEILGKI----RHRNILKLYACLLK-GGSSFLVLEYMPNGNLFQALHKRVKEG--KPELDWFRRYKIALG 784 (973)
Q Consensus 717 -----~~~~E~~~l~~l----~hpniv~l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~--~~~~~~~~~~~i~~~ 784 (973)
++.+|+..+.++ .+...+.+-.++.+ ....++||||++|+.+.++-.-. ..+ ...+....+..++.|
T Consensus 197 l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~-~~g~d~~~la~~~v~~~~~Q 275 (537)
T PRK04750 197 LHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALR-AAGTDMKLLAERGVEVFFTQ 275 (537)
T ss_pred HHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHH-hcCCCHHHHHHHHHHHHHHH
Confidence 123344444444 24444444444432 55678999999999998753211 111 011222222233333
Q ss_pred HHHHHhHhhhcCCCCeEecCCCCCCeeecCCC----ceEEecccCCccccC
Q 002063 785 AAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY----EPKIADFGVAKIAEN 831 (973)
Q Consensus 785 ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~----~~kl~Dfgl~~~~~~ 831 (973)
+ . ..|++|+|++|.||+++.++ ++++.|||++.....
T Consensus 276 i-------f---~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 276 V-------F---RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred H-------H---hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 3 3 46899999999999999988 999999999876643
No 467
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.22 E-value=3e-12 Score=128.06 Aligned_cols=127 Identities=20% Similarity=0.222 Sum_probs=52.6
Q ss_pred CCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEee
Q 002063 194 NLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDIS 273 (973)
Q Consensus 194 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls 273 (973)
.|+.|+||+|.|+ .+.++..-+++++.|++|+|.|... +.+..+++|+.|||++|.++ .+..+-..+-+.+.|.|+
T Consensus 285 ~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La 360 (490)
T KOG1259|consen 285 ELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLA 360 (490)
T ss_pred hhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehh
Confidence 4444444444444 3444444444444444444444311 12444444444444444444 233333334444444444
Q ss_pred ccccccccCCccCCCCCccEEEcccCCCCCC-CCCCcCCccccceeeccccccC
Q 002063 274 SNQMYGKLPEEIGNLKNLTVFQCFKNNFSGE-FPSGFGDMRKLFAFSIYGNRFS 326 (973)
Q Consensus 274 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~ 326 (973)
+|.+.. -..++++.+|..|++++|+|... ....++++|.|+.+.|.+|.+.
T Consensus 361 ~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 361 QNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred hhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcc
Confidence 444431 12233344444444444444321 1123344444444444444443
No 468
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.18 E-value=3.4e-12 Score=127.71 Aligned_cols=136 Identities=24% Similarity=0.365 Sum_probs=88.4
Q ss_pred ccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCC
Q 002063 381 YADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLE 460 (973)
Q Consensus 381 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 460 (973)
+...+.|++||||+|.|+ .+-... ...+.++.|++|+|.|.. +. .+..+++|+
T Consensus 280 ~dTWq~LtelDLS~N~I~-~iDESv------------------------KL~Pkir~L~lS~N~i~~-v~-nLa~L~~L~ 332 (490)
T KOG1259|consen 280 ADTWQELTELDLSGNLIT-QIDESV------------------------KLAPKLRRLILSQNRIRT-VQ-NLAELPQLQ 332 (490)
T ss_pred cchHhhhhhccccccchh-hhhhhh------------------------hhccceeEEeccccceee-eh-hhhhcccce
Confidence 333455666777777666 333333 344556666666666652 22 266667777
Q ss_pred EEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCC-CccccccCCCCeeecCCC
Q 002063 461 RLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNI-PRSLSLLSSLNALNLSGN 539 (973)
Q Consensus 461 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N 539 (973)
.||||+|.++ .+-.+-..+.+.++|.|++|.|.. -..++++-+|..||+++|+|.... ...++++|-|+.|.|.+|
T Consensus 333 ~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~N 409 (490)
T KOG1259|consen 333 LLDLSGNLLA-ECVGWHLKLGNIKTLKLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGN 409 (490)
T ss_pred EeecccchhH-hhhhhHhhhcCEeeeehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCC
Confidence 7777777776 444455566677777777777753 245666777778888888876432 356789999999999999
Q ss_pred ccCCCCCc
Q 002063 540 KLTGSIPD 547 (973)
Q Consensus 540 ~l~~~~p~ 547 (973)
.|++ +|+
T Consensus 410 Pl~~-~vd 416 (490)
T KOG1259|consen 410 PLAG-SVD 416 (490)
T ss_pred Cccc-cch
Confidence 9994 444
No 469
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.16 E-value=1e-10 Score=116.39 Aligned_cols=126 Identities=24% Similarity=0.221 Sum_probs=94.5
Q ss_pred cCeecccCcEEEEEEEEcCCCceEEEEEeeccc-cHHHHHHHHHHHHhcCCCceee-EeEEEEeCCeeEEEEEccCCCch
Q 002063 681 DNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-GVKVFAAEMEILGKIRHRNILK-LYACLLKGGSSFLVLEYMPNGNL 758 (973)
Q Consensus 681 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~hpniv~-l~~~~~~~~~~~lv~e~~~~gsL 758 (973)
++.++.|.++.||+++.. ++.|++|+..... ....+.+|+++++.+.+.++++ ++.+ ..+..++||||++|.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~--~~~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYF--DPETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEE--eCCCCeEEEEecCCCcc
Confidence 357899999999999876 7789999875543 2345678999999987655543 3433 23345899999999877
Q ss_pred HHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCC-----eEecCCCCCCeeecCCCceEEecccCCc
Q 002063 759 FQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPP-----IIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 759 ~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~-----ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
.+. . . .....+.+++++++.|| ..+ ++|+|++|.||+++ ++.+++.|||.+.
T Consensus 79 ~~~--~-------~----~~~~~~~~l~~~l~~LH---~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 79 LTE--D-------F----SDPENLEKIAKLLKKLH---SSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred ccc--c-------c----cCHHHHHHHHHHHHHHh---CCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 532 0 0 11235678999999999 455 59999999999999 6789999999875
No 470
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.14 E-value=9.6e-12 Score=131.37 Aligned_cols=161 Identities=24% Similarity=0.260 Sum_probs=79.0
Q ss_pred cCCCCCcEEEecCCcccCCCC--CcCCCCCCCEEeccCcccCCccc--cccccccccceEEccCCcCCCCCCcccccCCC
Q 002063 118 SNCSNLKVLNVTGNAMVGSVP--DLSALKNLEIFDLSINYFTGRFP--RWVVNLTQLVSLSIGDNVYDEAEIPESIGNLK 193 (973)
Q Consensus 118 ~~l~~L~~L~L~~n~l~~~~~--~l~~l~~L~~L~Ls~n~l~~~~~--~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~ 193 (973)
.++.+|+...|.+..+..... ....+++++.||||.|-|....+ .-...|++|+.|+|+.|++....-...-..++
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 445667777777766654432 35566777777777776653322 23345666666666666553211001112345
Q ss_pred CCCEEEcccccCCCC-CChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCCC-CccccccccccEEE
Q 002063 194 NLTYLFLAHCNLRGR-IPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGEL-PAELGNLTLLQEFD 271 (973)
Q Consensus 194 ~L~~L~L~~n~l~~~-~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~-~~~l~~l~~L~~L~ 271 (973)
.|+.|.|+.|+++.. +...+..+++|+.|+|..|..-........-+..|+.|+|++|++-... -...+.++.|+.|+
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLN 277 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhh
Confidence 556666666665521 1122334455555555555322222223333445555555555544211 02234455555555
Q ss_pred eeccccc
Q 002063 272 ISSNQMY 278 (973)
Q Consensus 272 Ls~N~l~ 278 (973)
++.+.+.
T Consensus 278 ls~tgi~ 284 (505)
T KOG3207|consen 278 LSSTGIA 284 (505)
T ss_pred ccccCcc
Confidence 5555544
No 471
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.14 E-value=1e-11 Score=141.69 Aligned_cols=251 Identities=27% Similarity=0.308 Sum_probs=192.5
Q ss_pred cCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCccccccccccccceE
Q 002063 94 SALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSL 173 (973)
Q Consensus 94 ~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 173 (973)
..+..++.+.+..|.+.. +-..+..+.+|+.|++.+|.|......+..+++|++|||++|.|+.. ..+..++.|+.|
T Consensus 69 ~~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L 145 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKEL 145 (414)
T ss_pred HHhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhcccchhhhhcchheeccccccccc--cchhhccchhhh
Confidence 456778888899898873 44568889999999999999988766688999999999999999854 446677789999
Q ss_pred EccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCC-hhhhccCCCCeeeccccccccccchhhhccccccEEEeeccc
Q 002063 174 SIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIP-ESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANN 252 (973)
Q Consensus 174 ~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~ 252 (973)
++++|.+... ..+..+++|+.+++++|++...-+ . ...+.+|+.+++.+|.+.. ...+..+..+..+++..|.
T Consensus 146 ~l~~N~i~~~---~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~ 219 (414)
T KOG0531|consen 146 NLSGNLISDI---SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLDNK 219 (414)
T ss_pred eeccCcchhc---cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc--ccchHHHHHHHHhhccccc
Confidence 9999998643 456678999999999999995443 2 5888999999999999963 3445555666666889999
Q ss_pred CCCCCCccccccc--cccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCC---
Q 002063 253 LTGELPAELGNLT--LLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSG--- 327 (973)
Q Consensus 253 l~~~~~~~l~~l~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--- 327 (973)
++..-+ +..+. .|+.+++++|++. ..+..+..+.++..|++.+|++... ..+...+.+..+....|.+..
T Consensus 220 i~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 294 (414)
T KOG0531|consen 220 ISKLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEA 294 (414)
T ss_pred ceeccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhh
Confidence 884322 22333 3899999999997 5557788889999999999998753 235566777888888888762
Q ss_pred CCCcc-ccccccccccccccccccccCChhhh
Q 002063 328 PFPEN-LGRYTALTDVDISENQFSGSFPKYLC 358 (973)
Q Consensus 328 ~~~~~-l~~l~~L~~L~Ls~N~l~~~~p~~~~ 358 (973)
..... ....+.++.+.+..|.+....+....
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (414)
T KOG0531|consen 295 ISQEYITSAAPTLVTLTLELNPIRKISSLDLR 326 (414)
T ss_pred hhccccccccccccccccccCcccccccccHH
Confidence 22222 56678899999999998866554443
No 472
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.13 E-value=6.6e-12 Score=129.22 Aligned_cols=233 Identities=18% Similarity=0.268 Sum_probs=125.1
Q ss_pred CceEEEeecCCCCCcc----ccccccCCCCCcEEeCCCC---cccCccCcc-------ccCCCCCcEEEecCCcccC-CC
Q 002063 73 GRVTEISFDNKSLSGE----ISSSISALQSLTVLSLPFN---VLSGKLPLE-------LSNCSNLKVLNVTGNAMVG-SV 137 (973)
Q Consensus 73 ~~v~~l~l~~~~l~~~----~~~~l~~l~~L~~L~Ls~n---~l~~~~p~~-------l~~l~~L~~L~L~~n~l~~-~~ 137 (973)
..++.|+|+||.+.-+ +.+.|.+.++|+..++|+- ++..++|.+ +-.+++|++||||.|-+.. .+
T Consensus 30 ~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g~ 109 (382)
T KOG1909|consen 30 DSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKGI 109 (382)
T ss_pred CceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccch
Confidence 4578888888887643 4456777788888888752 333455543 4556678888888887732 22
Q ss_pred CC----cCCCCCCCEEeccCcccCCcccc-------------ccccccccceEEccCCcCCCCC---CcccccCCCCCCE
Q 002063 138 PD----LSALKNLEIFDLSINYFTGRFPR-------------WVVNLTQLVSLSIGDNVYDEAE---IPESIGNLKNLTY 197 (973)
Q Consensus 138 ~~----l~~l~~L~~L~Ls~n~l~~~~~~-------------~~~~l~~L~~L~l~~n~l~~~~---ip~~~~~l~~L~~ 197 (973)
+. +.++..|++|.|.+|.+.-.--. ..+.-++||++..++|++.... +...+...+.|+.
T Consensus 110 ~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~lee 189 (382)
T KOG1909|consen 110 RGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPTLEE 189 (382)
T ss_pred HHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhccccce
Confidence 22 56677888888888776532211 1223455666666666654322 2223444555666
Q ss_pred EEcccccCCCC----CChhhhccCCCCeeeccccccccc----cchhhhccccccEEEeecccCCCCCCccccccccccE
Q 002063 198 LFLAHCNLRGR----IPESISELRELGTLDICRNKISGE----FPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQE 269 (973)
Q Consensus 198 L~L~~n~l~~~----~p~~l~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 269 (973)
+.++.|.|... +...+..+++|++|||.+|-++.. +...++.+++|+.|++++|.+.......|.+
T Consensus 190 vr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~------ 263 (382)
T KOG1909|consen 190 VRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVD------ 263 (382)
T ss_pred EEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHH------
Confidence 66666655421 123345555555555555555422 2223344445555555555544332222210
Q ss_pred EEeeccccccccCCcc-CCCCCccEEEcccCCCCC----CCCCCcCCccccceeecccccc
Q 002063 270 FDISSNQMYGKLPEEI-GNLKNLTVFQCFKNNFSG----EFPSGFGDMRKLFAFSIYGNRF 325 (973)
Q Consensus 270 L~Ls~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l 325 (973)
.+ ...++|++|.+.+|.|+. .+...+...+.|..|+|++|++
T Consensus 264 --------------al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 264 --------------ALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred --------------HHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 01 113455555555555543 1222344566677777777776
No 473
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.12 E-value=2e-12 Score=133.01 Aligned_cols=240 Identities=19% Similarity=0.252 Sum_probs=164.5
Q ss_pred ccccccCCCCCcEEeCCCCcccC----ccCccccCCCCCcEEEecCCcccCCC-----CC-------cCCCCCCCEEecc
Q 002063 89 ISSSISALQSLTVLSLPFNVLSG----KLPLELSNCSNLKVLNVTGNAMVGSV-----PD-------LSALKNLEIFDLS 152 (973)
Q Consensus 89 ~~~~l~~l~~L~~L~Ls~n~l~~----~~p~~l~~l~~L~~L~L~~n~l~~~~-----~~-------l~~l~~L~~L~Ls 152 (973)
+-+.+..+..++.|+||+|.|.- .+-+.+.+.++|+.-++++-. +|.+ +. +-..++|++||||
T Consensus 22 v~~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~f-tGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLS 100 (382)
T KOG1909|consen 22 VEEELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMF-TGRLKDEIPEALKMLSKALLGCPKLQKLDLS 100 (382)
T ss_pred HHHHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhh-cCCcHHHHHHHHHHHHHHHhcCCceeEeecc
Confidence 33456778889999999998853 345567778888888887632 2221 11 2334566666666
Q ss_pred CcccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChh-------------hhccCCC
Q 002063 153 INYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPES-------------ISELREL 219 (973)
Q Consensus 153 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~-------------l~~l~~L 219 (973)
+|.|....+..|. +-+.++..|++|.|.+|.+...-... ...=++|
T Consensus 101 DNA~G~~g~~~l~---------------------~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~L 159 (382)
T KOG1909|consen 101 DNAFGPKGIRGLE---------------------ELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKL 159 (382)
T ss_pred ccccCccchHHHH---------------------HHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcce
Confidence 6666544433332 22445566666666666665211111 1223678
Q ss_pred Ceeecccccccccc----chhhhccccccEEEeecccCCCC----CCccccccccccEEEeeccccccc----cCCccCC
Q 002063 220 GTLDICRNKISGEF----PRSIRKLQKLWKIELYANNLTGE----LPAELGNLTLLQEFDISSNQMYGK----LPEEIGN 287 (973)
Q Consensus 220 ~~L~L~~n~l~~~~----p~~l~~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~Ls~N~l~~~----~p~~~~~ 287 (973)
+++...+|++.... ...|...+.|+.+.++.|.|... +...|..+++|+.|||..|.++.. +...+..
T Consensus 160 rv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s 239 (382)
T KOG1909|consen 160 RVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSS 239 (382)
T ss_pred EEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcc
Confidence 89999999887433 34566778999999999988732 224567899999999999998643 4455677
Q ss_pred CCCccEEEcccCCCCCCCCCCc-----CCccccceeeccccccCC----CCCcccccccccccccccccccc
Q 002063 288 LKNLTVFQCFKNNFSGEFPSGF-----GDMRKLFAFSIYGNRFSG----PFPENLGRYTALTDVDISENQFS 350 (973)
Q Consensus 288 l~~L~~L~l~~N~l~~~~p~~~-----~~l~~L~~L~l~~N~l~~----~~~~~l~~l~~L~~L~Ls~N~l~ 350 (973)
+++|+.|++++|.+.......| ...++|+.|.+.+|.|+. .+...+...+.|+.|+|++|.+.
T Consensus 240 ~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 240 WPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred cchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 8899999999999987665544 246899999999999983 23344566889999999999994
No 474
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.10 E-value=9.9e-12 Score=131.28 Aligned_cols=207 Identities=19% Similarity=0.199 Sum_probs=146.8
Q ss_pred cCCCCCcEEeCCCCcccCccC--ccccCCCCCcEEEecCCcccCCCC---CcCCCCCCCEEeccCcccCCcccc-ccccc
Q 002063 94 SALQSLTVLSLPFNVLSGKLP--LELSNCSNLKVLNVTGNAMVGSVP---DLSALKNLEIFDLSINYFTGRFPR-WVVNL 167 (973)
Q Consensus 94 ~~l~~L~~L~Ls~n~l~~~~p--~~l~~l~~L~~L~L~~n~l~~~~~---~l~~l~~L~~L~Ls~n~l~~~~~~-~~~~l 167 (973)
+++.+|+...|.+..+.. .+ .....|++++.|||++|-+..--+ -...|++|+.|+||.|.+.-.... .-..+
T Consensus 118 sn~kkL~~IsLdn~~V~~-~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVED-AGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCccccc-cchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 368889999999888762 23 357789999999999998865433 256889999999999988632222 22367
Q ss_pred cccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccc--hhhhccccccE
Q 002063 168 TQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFP--RSIRKLQKLWK 245 (973)
Q Consensus 168 ~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p--~~l~~l~~L~~ 245 (973)
++|+.|.|+.+.++...+-..+..+++|+.|+|..|...+.-.....-+..|++|||++|.+- ..+ ...+.++.|+.
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li-~~~~~~~~~~l~~L~~ 275 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLI-DFDQGYKVGTLPGLNQ 275 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccc-ccccccccccccchhh
Confidence 899999999999886555556678899999999999644344455667788999999999886 344 45788999999
Q ss_pred EEeecccCCCC-CCcc-----ccccccccEEEeeccccccc-cCCccCCCCCccEEEcccCCCC
Q 002063 246 IELYANNLTGE-LPAE-----LGNLTLLQEFDISSNQMYGK-LPEEIGNLKNLTVFQCFKNNFS 302 (973)
Q Consensus 246 L~L~~n~l~~~-~~~~-----l~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~ 302 (973)
|+++.+.++.. .|+. ...+++|++|+++.|++... .-..+..+.+|+.|.+..|.++
T Consensus 276 Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 276 LNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred hhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 99999998843 2222 24567788888888877421 1122334455555555555554
No 475
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.09 E-value=1e-10 Score=113.77 Aligned_cols=108 Identities=25% Similarity=0.260 Sum_probs=25.1
Q ss_pred CCCCcEEeCCCCcccCccCcccc-CCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCccccccccccccceEE
Q 002063 96 LQSLTVLSLPFNVLSGKLPLELS-NCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLS 174 (973)
Q Consensus 96 l~~L~~L~Ls~n~l~~~~p~~l~-~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 174 (973)
...+++|+|++|.|+. | +.++ .+.+|+.|+|++|.|+.. +.+..+++|++|++++|.++...+.....+++|++|+
T Consensus 18 ~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~l-~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 18 PVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITKL-EGLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELY 94 (175)
T ss_dssp --------------------S--TT-TT--EEE-TTS--S---TT----TT--EEE--SS---S-CHHHHHH-TT--EEE
T ss_pred cccccccccccccccc-c-cchhhhhcCCCEEECCCCCCccc-cCccChhhhhhcccCCCCCCccccchHHhCCcCCEEE
Confidence 3345666666666652 2 2344 355666666666666543 3455566666666666666532221112345555555
Q ss_pred ccCCcCCCCCCcccccCCCCCCEEEcccccCC
Q 002063 175 IGDNVYDEAEIPESIGNLKNLTYLFLAHCNLR 206 (973)
Q Consensus 175 l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~ 206 (973)
+++|++....--..+..+++|++|+|.+|.++
T Consensus 95 L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 95 LSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp -TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 55555443222223333444444444444433
No 476
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.06 E-value=2.4e-09 Score=106.54 Aligned_cols=135 Identities=16% Similarity=0.157 Sum_probs=95.8
Q ss_pred CeecccCcEEEEEEEEcC------CCceEEEEEeecc------------cc------------HHHH----HHHHHHHHh
Q 002063 682 NLIGSGGTGKVYRLDLKK------NAGTVAVKQLWKG------------DG------------VKVF----AAEMEILGK 727 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~------~~~~vavK~~~~~------------~~------------~~~~----~~E~~~l~~ 727 (973)
..||.|.-+.||.|.... .+..+|||+.+.. .+ ...+ .+|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998653 3578999976420 00 1122 379999988
Q ss_pred cCC--CceeeEeEEEEeCCeeEEEEEccCCCchHH-HHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHh-hhcCCCCeEec
Q 002063 728 IRH--RNILKLYACLLKGGSSFLVLEYMPNGNLFQ-ALHKRVKEGKPELDWFRRYKIALGAAKGIAYL-HHDCSPPIIHR 803 (973)
Q Consensus 728 l~h--pniv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~L-H~~~~~~ivH~ 803 (973)
+.. -++-+++++ ...++||||+.++.+.. .++. ..++......+..+++.+|..+ | ..++|||
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd------~~~~~~~~~~i~~~i~~~l~~l~H---~~glVHG 149 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD------AKLNDEEMKNAYYQVLSMMKQLYK---ECNLVHA 149 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc------cccCHHHHHHHHHHHHHHHHHHHH---hCCeecC
Confidence 853 344455543 45689999997654321 2221 1233445567788999999999 6 6799999
Q ss_pred CCCCCCeeecCCCceEEecccCCcccc
Q 002063 804 DIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 804 Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
|+++.||+++ ++.+.++|||.+....
T Consensus 150 DLs~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 150 DLSEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CCCHHHEEEE-CCcEEEEECCCceeCC
Confidence 9999999997 4689999999887554
No 477
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.04 E-value=3e-11 Score=137.89 Aligned_cols=127 Identities=22% Similarity=0.287 Sum_probs=63.3
Q ss_pred CCCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEeeccccccccCCccCCCCCccEEEc
Q 002063 217 RELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQC 296 (973)
Q Consensus 217 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 296 (973)
+.++.++..++.+...--. ...+..++.+.+..|.+.. +-..+..+++|+.|++..|+|. .+...+..+++|++|++
T Consensus 49 ~~~~~~~~~~~~~~~~~~~-~~~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~l 125 (414)
T KOG0531|consen 49 SDLEEIDLIFNLDGSDEDL-VESLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDL 125 (414)
T ss_pred chhhhhcchhccccchhhh-HHHhHhHHhhccchhhhhh-hhcccccccceeeeeccccchh-hcccchhhhhcchheec
Confidence 3445555555554322111 1345556666666776663 3334556666777777777665 23332555666666666
Q ss_pred ccCCCCCCCCCCcCCccccceeeccccccCCCCCcccccccccccccccccccc
Q 002063 297 FKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFS 350 (973)
Q Consensus 297 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~ 350 (973)
++|.|+... .+..++.|+.|++.+|.|+. ...+..+..|+.+++++|++.
T Consensus 126 s~N~I~~i~--~l~~l~~L~~L~l~~N~i~~--~~~~~~l~~L~~l~l~~n~i~ 175 (414)
T KOG0531|consen 126 SFNKITKLE--GLSTLTLLKELNLSGNLISD--ISGLESLKSLKLLDLSYNRIV 175 (414)
T ss_pred ccccccccc--chhhccchhhheeccCcchh--ccCCccchhhhcccCCcchhh
Confidence 666665432 23334445555555555441 122333444444444444443
No 478
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.03 E-value=3e-10 Score=137.91 Aligned_cols=292 Identities=22% Similarity=0.182 Sum_probs=134.7
Q ss_pred CCCcEEeCCCCcccCccCccccCCCCCcEEEecCCc--ccCCCC-CcCCCCCCCEEeccCcccCCccccccccccccceE
Q 002063 97 QSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNA--MVGSVP-DLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSL 173 (973)
Q Consensus 97 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~--l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 173 (973)
...+...+.+|.+. .++... .+++|+.|-+.+|. +..... .|..++.|++||||+|.=-+
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~~-~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~--------------- 585 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGSS-ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLS--------------- 585 (889)
T ss_pred hheeEEEEeccchh-hccCCC-CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccC---------------
Confidence 45555666555554 222222 22255566555554 222222 24555555555555544333
Q ss_pred EccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccC
Q 002063 174 SIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNL 253 (973)
Q Consensus 174 ~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l 253 (973)
++|..++.|-+|++|+|++..+. .+|..+.+|+.|.+|++..+.-...+|..+..+.+|++|.+.....
T Consensus 586 ----------~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~ 654 (889)
T KOG4658|consen 586 ----------KLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSAL 654 (889)
T ss_pred ----------cCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeecccc
Confidence 45555555556666666665555 5555566666666666665544334455555566666666554331
Q ss_pred --CCCCCccccccccccEEEeeccccccccCCccCCCCCcc----EEEcccCCCCCCCCCCcCCccccceeeccccccCC
Q 002063 254 --TGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLT----VFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSG 327 (973)
Q Consensus 254 --~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 327 (973)
+...-..+.++.+|+.+....... .+-..+..+..|. .+.+..+... ..+..+..+.+|+.|.+.++.+..
T Consensus 655 ~~~~~~l~el~~Le~L~~ls~~~~s~--~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e 731 (889)
T KOG4658|consen 655 SNDKLLLKELENLEHLENLSITISSV--LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISE 731 (889)
T ss_pred ccchhhHHhhhcccchhhheeecchh--HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCch
Confidence 122223334444455444432222 1111112222222 2222222221 334455666677777776666653
Q ss_pred CCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccC
Q 002063 328 PFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWA 407 (973)
Q Consensus 328 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 407 (973)
......... +.++ . .+.+..... .+...-..+...--.++|+.|++..+.....++.....
T Consensus 732 ~~~~~~~~~---~~~~------------~---f~~l~~~~~-~~~~~~r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~ 792 (889)
T KOG4658|consen 732 IVIEWEESL---IVLL------------C---FPNLSKVSI-LNCHMLRDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKA 792 (889)
T ss_pred hhccccccc---chhh------------h---HHHHHHHHh-hccccccccchhhccCcccEEEEecccccccCCCHHHH
Confidence 222221111 1111 0 001111111 11111122222234478888888888777666666666
Q ss_pred CCCcceEeccCCcCCCC-CCCccCCCCCCCEE
Q 002063 408 LPNVGMLDFGDNDFTGG-ISPLIGLSTSLSQL 438 (973)
Q Consensus 408 l~~L~~L~L~~N~l~~~-~~~~~~~~~~L~~L 438 (973)
+..+..+.+..+.+.+. .....+.++++..+
T Consensus 793 ~~~l~~~i~~f~~~~~l~~~~~l~~l~~i~~~ 824 (889)
T KOG4658|consen 793 LLELKELILPFNKLEGLRMLCSLGGLPQLYWL 824 (889)
T ss_pred hhhcccEEecccccccceeeecCCCCceeEec
Confidence 66666666666666554 23333334444433
No 479
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.00 E-value=2e-10 Score=128.07 Aligned_cols=250 Identities=19% Similarity=0.201 Sum_probs=175.4
Q ss_pred HHHhcCCcccCeecccCcEEEEEEEEc-CCCceEEEEEeecc--ccHHH--HHHHHHHHHhc-CCCceeeEeEEEEeCCe
Q 002063 672 AEQICNLEEDNLIGSGGTGKVYRLDLK-KNAGTVAVKQLWKG--DGVKV--FAAEMEILGKI-RHRNILKLYACLLKGGS 745 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~-~~~~~vavK~~~~~--~~~~~--~~~E~~~l~~l-~hpniv~l~~~~~~~~~ 745 (973)
.....+|..+..||.|.|+.|++...+ .++..|++|...+. ....+ -..|+.+...+ .|.++++.+..|...+.
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~ 340 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQ 340 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccc
Confidence 344567888999999999999987765 66888999976552 11111 23466666665 58999998888888888
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCC-CceEEeccc
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED-YEPKIADFG 824 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~Dfg 824 (973)
.|+--||++++++...... ...++...++++..|++.++.++| ++.++|+|+||+||++..+ +..+++|||
T Consensus 341 ~~ip~e~~~~~s~~l~~~~-----~~~~d~~~~~~~~~q~~~~l~~i~---s~~~~~~d~~psni~i~~~~~~~~~~~~~ 412 (524)
T KOG0601|consen 341 GYIPLEFCEGGSSSLRSVT-----SQMLDEDPRLRLTAQILTALNVIH---SKLFVHLDVKPSNILISNDGFFSKLGDFG 412 (524)
T ss_pred ccCchhhhcCcchhhhhHH-----HHhcCcchhhhhHHHHHhcccccc---chhhhcccccccceeeccchhhhhccccc
Confidence 8899999999988766532 234666778889999999999999 8899999999999999986 788999999
Q ss_pred CCccccCCCCcccccccCcccccc--cccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccc
Q 002063 825 VAKIAENSPKVSDYSCFAGTHGYI--APELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH 902 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~ 902 (973)
.+..+.-.. .......+++ +|+......+..+.|++|||..+.|.+++..--... . .|
T Consensus 413 ~~t~~~~~~-----~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~-~------~~-------- 472 (524)
T KOG0601|consen 413 CWTRLAFSS-----GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG-V------QS-------- 472 (524)
T ss_pred cccccceec-----ccccccccccccchhhccccccccccccccccccccccccCcccCccc-c------cc--------
Confidence 886432111 1112233344 555556677889999999999999999885432111 0 00
Q ss_pred ccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 903 ENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
..+...... ........+..+...+..+++..||.+.++..+.+-.+
T Consensus 473 ---~~i~~~~~p--~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 473 ---LTIRSGDTP--NLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred ---eeeeccccc--CCCchHHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 001111110 01111245666777888999999999998877665443
No 480
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.00 E-value=3.2e-10 Score=110.37 Aligned_cols=38 Identities=39% Similarity=0.544 Sum_probs=5.3
Q ss_pred CCCCCcEEEecCCcccCCCCCcC-CCCCCCEEeccCcccC
Q 002063 119 NCSNLKVLNVTGNAMVGSVPDLS-ALKNLEIFDLSINYFT 157 (973)
Q Consensus 119 ~l~~L~~L~L~~n~l~~~~~~l~-~l~~L~~L~Ls~n~l~ 157 (973)
+..++++|+|++|.|+.. ..++ .+.+|+.|||++|.++
T Consensus 17 n~~~~~~L~L~~n~I~~I-e~L~~~l~~L~~L~Ls~N~I~ 55 (175)
T PF14580_consen 17 NPVKLRELNLRGNQISTI-ENLGATLDKLEVLDLSNNQIT 55 (175)
T ss_dssp --------------------S--TT-TT--EEE-TTS--S
T ss_pred cccccccccccccccccc-cchhhhhcCCCEEECCCCCCc
Confidence 333455555555555442 2333 3445555555555544
No 481
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.99 E-value=3.8e-10 Score=82.41 Aligned_cols=40 Identities=55% Similarity=1.107 Sum_probs=31.1
Q ss_pred hHHHHHHHHHHHhcC-CCcccccCCCCCC-CCCCCcceeeeC
Q 002063 30 NVETQALIQFKSKLK-DPHGVLDSWKESA-DSPCGFSGITCD 69 (973)
Q Consensus 30 ~~~~~aLl~~k~~~~-d~~~~l~~W~~~~-~~~c~w~gv~C~ 69 (973)
++|++||++||+++. ||.+.+.+|+.+. .+||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 579999999999998 5778999999874 578999999996
No 482
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.99 E-value=1.2e-10 Score=135.92 Aligned_cols=248 Identities=21% Similarity=0.218 Sum_probs=171.3
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec-----cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~-----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
..+.+.+.+.+-+|.++.++.++-...+...+.|+... ..+++...++-.+.-..++|.++.....+......++
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 45567788899999999999888777676666664433 1233334444444444567888877766666778899
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
+++|..+++|...++... ..+..........+.++.+||| ...+.|||++|.|.+...++..+++|||....
T Consensus 882 ~~~~~~~~~~~Skl~~~~-----~~saepaRs~i~~~vqs~e~L~---s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~ 953 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSG-----CLSAEPARSPILERVQSLESLH---SSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSK 953 (1205)
T ss_pred hhHHhccCCchhhhhcCC-----CcccccccchhHHHHhhhhccc---cchhhcccccccchhhcccCCcccCccccccc
Confidence 999999999999988642 2233333445566778899999 66689999999999999999999999984332
Q ss_pred ccCC-------------------------CCc----ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCC
Q 002063 829 AENS-------------------------PKV----SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRK 879 (973)
Q Consensus 829 ~~~~-------------------------~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~ 879 (973)
.+-. ... .......||+.|.+||...+.....++|+|+.|++++|.++|..
T Consensus 954 vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~p 1033 (1205)
T KOG0606|consen 954 VGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIP 1033 (1205)
T ss_pred cccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCC
Confidence 1100 000 11223568999999999999999999999999999999999999
Q ss_pred CCCcccCCCccHHHHHHHhhcccccchhhccccc-cChhhHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 002063 880 PVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV-ASESIKEDMIKLLKIAVVCTTKLPNLRPPMR 944 (973)
Q Consensus 880 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~ 944 (973)
||...... +.+.. +..... ....+.+......+++...+..+|.+|-.+.
T Consensus 1034 p~na~tpq-----~~f~n----------i~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1034 PFNAETPQ-----QIFEN----------ILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCCCcchh-----hhhhc----------cccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 99765221 11111 111111 1112223334455666777788899887766
No 483
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.97 E-value=5e-10 Score=135.99 Aligned_cols=105 Identities=26% Similarity=0.349 Sum_probs=54.1
Q ss_pred CCCEEEccccc--CCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEE
Q 002063 194 NLTYLFLAHCN--LRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFD 271 (973)
Q Consensus 194 ~L~~L~L~~n~--l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 271 (973)
+|+.|-+..|. +.....+.|..++.|++|||++|.=.+.+|+.++.+-+|++|+|++..++ .+|..+.++..|.+||
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Ln 624 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLN 624 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheec
Confidence 45555555553 33233333455555555555555444455555555555555555555555 5555555555555555
Q ss_pred eeccccccccCCccCCCCCccEEEcccC
Q 002063 272 ISSNQMYGKLPEEIGNLKNLTVFQCFKN 299 (973)
Q Consensus 272 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 299 (973)
+..+.-...+|.....|++|++|.+...
T Consensus 625 l~~~~~l~~~~~i~~~L~~Lr~L~l~~s 652 (889)
T KOG4658|consen 625 LEVTGRLESIPGILLELQSLRVLRLPRS 652 (889)
T ss_pred cccccccccccchhhhcccccEEEeecc
Confidence 5555443344444444555555555443
No 484
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.90 E-value=1.4e-08 Score=96.85 Aligned_cols=128 Identities=25% Similarity=0.333 Sum_probs=98.4
Q ss_pred CeecccCcEEEEEEEEcCCCceEEEEE-eeccc---------cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQ-LWKGD---------GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~~vavK~-~~~~~---------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
..+++|+-+.+|.+.+. |..+++|. +.+.. ...+-.+|+.++.+++--.|-...-+..+++...|+||
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me 79 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME 79 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence 35789999999999775 55577774 22211 12334679999999876666666667778888899999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
|++|..|.+++... ...++..+-+-+.-|| ..+|||+|+.++||.+..+. +.+.|||++.
T Consensus 80 ~I~G~~lkd~l~~~------------~~~~~r~vG~~vg~lH---~~givHGDLTtsNiIl~~~~-i~~IDfGLg~ 139 (204)
T COG3642 80 YIEGELLKDALEEA------------RPDLLREVGRLVGKLH---KAGIVHGDLTTSNIILSGGR-IYFIDFGLGE 139 (204)
T ss_pred EeCChhHHHHHHhc------------chHHHHHHHHHHHHHH---hcCeecCCCccceEEEeCCc-EEEEECCccc
Confidence 99998888888742 1344556666677899 88999999999999998875 9999999986
No 485
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.86 E-value=1e-08 Score=106.90 Aligned_cols=139 Identities=22% Similarity=0.296 Sum_probs=101.9
Q ss_pred CeecccCcEEEEEEEEcCCCceEEEEEeeccc---cHHHHHHHHHHHHhcCCC--ceeeEeEEEEeC---CeeEEEEEcc
Q 002063 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHR--NILKLYACLLKG---GSSFLVLEYM 753 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~hp--niv~l~~~~~~~---~~~~lv~e~~ 753 (973)
+.|+.|..+.||++...+ |+.+++|...... ....+.+|+++++.+.+. .+.+++.+.... +..++||||+
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 568999999999998864 6789999876533 356788999999999763 456666665553 3568999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhc--------------------------------------
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHD-------------------------------------- 795 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~-------------------------------------- 795 (973)
+|+++.+.+.. ..++..+...++.++++++..+|+-
T Consensus 83 ~G~~l~~~~~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (223)
T cd05154 83 DGRVLRDRLLR------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPA 156 (223)
T ss_pred CCEecCCCCCC------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHH
Confidence 99877654320 1244555556666666666666631
Q ss_pred ---------------CCCCeEecCCCCCCeeecC--CCceEEecccCCc
Q 002063 796 ---------------CSPPIIHRDIKSSNILLDE--DYEPKIADFGVAK 827 (973)
Q Consensus 796 ---------------~~~~ivH~Dlkp~Nill~~--~~~~kl~Dfgl~~ 827 (973)
....++|+|+.|.||+++. ++.+.+.||+.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~ 205 (223)
T cd05154 157 MERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT 205 (223)
T ss_pred HHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence 1246899999999999998 6678999999775
No 486
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.86 E-value=2.9e-08 Score=93.92 Aligned_cols=140 Identities=23% Similarity=0.270 Sum_probs=103.9
Q ss_pred ccCeecccCcEEEEEEEEcCCCceEEEEEeec-cc---------cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 680 EDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-GD---------GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 680 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~-~~---------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
....+-+|+-+.|+++.+. |+.+.||.-.. .. ..++-.+|++.+.+++--.|.-..-++.+...-.++
T Consensus 11 ~l~likQGAEArv~~~~~~--Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS--GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY 88 (229)
T ss_pred cceeeeccceeeEeeeccC--CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence 4567899999999999987 77888884322 11 223456799999888765666555566676677899
Q ss_pred EEccCC-CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCC---ceEEecccC
Q 002063 750 LEYMPN-GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY---EPKIADFGV 825 (973)
Q Consensus 750 ~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~---~~kl~Dfgl 825 (973)
|||++| .++.+++..... .+........++.+|-+.+.-|| ..++||+|+..+||++..++ .+.+.|||+
T Consensus 89 ME~~~g~~~vk~~i~~~~~---~~~~d~~~~~~~~~iG~~igklH---~ndiiHGDLTTSNill~~~~~~~~~~lIdfgl 162 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTME---DESEDEGLAELARRIGELIGKLH---DNDIIHGDLTTSNILLRSDGNQITPILIDFGL 162 (229)
T ss_pred EEeccchhHHHHHHHHHcc---CcccchhHHHHHHHHHHHHHHhh---hCCeecccccccceEEecCCCcCceEEEeecc
Confidence 999966 388888876421 12222233577888888999999 88999999999999997655 358999999
Q ss_pred Cc
Q 002063 826 AK 827 (973)
Q Consensus 826 ~~ 827 (973)
+.
T Consensus 163 s~ 164 (229)
T KOG3087|consen 163 SS 164 (229)
T ss_pred hh
Confidence 75
No 487
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.85 E-value=7.2e-08 Score=102.07 Aligned_cols=265 Identities=15% Similarity=0.158 Sum_probs=159.0
Q ss_pred cccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhc-CCCceeeEeEEE-------EeCCeeEEEE
Q 002063 679 EEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKI-RHRNILKLYACL-------LKGGSSFLVL 750 (973)
Q Consensus 679 ~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~-------~~~~~~~lv~ 750 (973)
...+.||+|+-+.+|-.-.- + ..+-|++..+--..+ ...+..|... .||-+-.-+.+= ..+....+.|
T Consensus 14 ~~gr~LgqGgea~ly~l~e~--~-d~VAKIYh~Pppa~~-aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEV--R-DQVAKIYHAPPPAAQ-AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCCccccCCccceeeecchh--h-chhheeecCCCchHH-HHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 45688999999999964322 2 234566554322211 2233334333 566443311111 1122356778
Q ss_pred EccCCCc-hHHHHH-hhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 751 EYMPNGN-LFQALH-KRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 751 e~~~~gs-L~~~l~-~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
+.+++.. ...+.. ....+.-+..+|....+++..+|.+.+.|| ..|.+-+|++++|+|+++++.+.+.|-..-..
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHH---hcCCcccccCccceeeecCceEEEEcccceee
Confidence 8876641 222221 112345667899999999999999999999 78999999999999999999999998664333
Q ss_pred ccCCCCcccccccCcccccccccccc-----cCCCCccchHHHHHHHHHHHHhC-CCCCCcccCC--C-ccHHHHH-HHh
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAY-----TCKVSEKSDVFSFGVVLLELVTG-RKPVEEEYGD--G-KDIVYWV-STH 898 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~~l~ell~g-~~pf~~~~~~--~-~~~~~~~-~~~ 898 (973)
. .....+.+.+|...|.+||... +..-+...|-|.+|+++++++.| ++||.+.+.. . .-....+ ...
T Consensus 167 ~---~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~ 243 (637)
T COG4248 167 N---ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGR 243 (637)
T ss_pred c---cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcce
Confidence 2 3345567789999999999754 33456678999999999999885 9999865321 1 1111011 111
Q ss_pred hcccccchhhccccccChhhHHHHHHHHHHHHHhcCCC--CCCCCCHHHHHHHhhcC
Q 002063 899 LNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKL--PNLRPPMREVVKMLADA 953 (973)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~d--P~~Rpt~~evl~~L~~~ 953 (973)
.-....-..-..+........-....+.-+...|+... |.-||+++..+..|...
T Consensus 244 f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al 300 (637)
T COG4248 244 FAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDAL 300 (637)
T ss_pred eeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHH
Confidence 00000000000011111112223334445555676443 66899999888777654
No 488
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.77 E-value=3.1e-09 Score=85.02 Aligned_cols=60 Identities=35% Similarity=0.505 Sum_probs=34.9
Q ss_pred cCCEEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCcc
Q 002063 482 QLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKL 541 (973)
Q Consensus 482 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 541 (973)
+|++|++++|+|+...+..|.++++|+.|++++|+|+...|..|.++++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 455555555555555455555555556666665655555555566666666666666654
No 489
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.73 E-value=2.5e-07 Score=100.82 Aligned_cols=170 Identities=17% Similarity=0.265 Sum_probs=129.2
Q ss_pred CcEEEEEEEEcCCCceEEEEEeeccc--cHHHHHHHHHHHHhcCCCceeeEeEEEEe----CCeeEEEEEccCCC-chHH
Q 002063 688 GTGKVYRLDLKKNAGTVAVKQLWKGD--GVKVFAAEMEILGKIRHRNILKLYACLLK----GGSSFLVLEYMPNG-NLFQ 760 (973)
Q Consensus 688 ~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~----~~~~~lv~e~~~~g-sL~~ 760 (973)
.-.+.||+....+|..|++|++.... .......-+++++++.|+|+|++.++|.. +...++||+|.++. +|.+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 44689999999999999999984321 11122345889999999999999998863 45679999999864 7766
Q ss_pred HHHhhh----------cCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 761 ALHKRV----------KEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 761 ~l~~~~----------~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
+--... .......++...+.++.|++.||.++| +.|...+-+.|.+|+++.+.+++|...|......
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH---ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH---SSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH---hcCceeecccHhHeEeeCcceEEEecccceeeec
Confidence 543221 122345778899999999999999999 7899999999999999999999999988776554
Q ss_pred CCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCC
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRK 879 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~ 879 (973)
.... |-+.+ ..+-|.=.||.+++.+.||..
T Consensus 445 ~d~~----------------~~le~---~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 445 EDPT----------------EPLES---QQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred CCCC----------------cchhH---HhhhhHHHHHHHHHHHhhccc
Confidence 4320 11111 235788899999999999854
No 490
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.72 E-value=4.8e-09 Score=83.87 Aligned_cols=59 Identities=37% Similarity=0.523 Sum_probs=28.2
Q ss_pred CCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcc
Q 002063 434 SLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENA 492 (973)
Q Consensus 434 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 492 (973)
+|++|++++|+++...+..|.++++|++|++++|+++...|..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34445555555544333444444455555555554444444444444444444444444
No 491
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.72 E-value=4.7e-10 Score=125.15 Aligned_cols=107 Identities=34% Similarity=0.422 Sum_probs=62.2
Q ss_pred CCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccc-cccccccCCEEEccCcccccCCCccccCccccc
Q 002063 430 GLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPS-ALGALRQLSSLHLEENALTGSIPNEMGDCARIV 508 (973)
Q Consensus 430 ~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 508 (973)
..++.|+.|+|++|+++.. ..+..++.|+.|||++|.++ .+|. ...++. |+.|.|++|.++.. ..+.++.+|+
T Consensus 184 qll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~lrnN~l~tL--~gie~LksL~ 257 (1096)
T KOG1859|consen 184 QLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNLRNNALTTL--RGIENLKSLY 257 (1096)
T ss_pred HHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhh-heeeeecccHHHhh--hhHHhhhhhh
Confidence 3445566666666666533 25666677777777777776 3332 333333 66777777766532 3455666666
Q ss_pred hhhccccccccCCC-ccccccCCCCeeecCCCccC
Q 002063 509 DLNLARNSLSGNIP-RSLSLLSSLNALNLSGNKLT 542 (973)
Q Consensus 509 ~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~ 542 (973)
.|||++|-|.+--- ..+..+..|+.|+|.||.+-
T Consensus 258 ~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 258 GLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 66777766654211 22345556666666666664
No 492
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.67 E-value=3.1e-07 Score=96.94 Aligned_cols=137 Identities=15% Similarity=0.088 Sum_probs=96.6
Q ss_pred eecccCcEEEEEEEEcCCCceEEEEEeecccc---H----------HHHHHHHHHHHhcCCCc--eeeEeEEEEe-----
Q 002063 683 LIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDG---V----------KVFAAEMEILGKIRHRN--ILKLYACLLK----- 742 (973)
Q Consensus 683 ~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~---~----------~~~~~E~~~l~~l~hpn--iv~l~~~~~~----- 742 (973)
.+-+.....|++.... |+.|.||+...... . ..+.+|...+.++..-+ +.+++++.+.
T Consensus 29 ~v~~~~~rrvvr~~~~--g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 29 VFRELEGRRTLRFELA--GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred EEecCCCceEEEEEEC--CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 3343344456676554 67899997643221 1 13678999998884333 3344555543
Q ss_pred CCeeEEEEEccCCC-chHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC-------
Q 002063 743 GGSSFLVLEYMPNG-NLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE------- 814 (973)
Q Consensus 743 ~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~------- 814 (973)
....++|||++++. +|.+++.... ....+......++.+++..+.-|| ..||+|+|++++|||++.
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~---~~~~~~~~~~~ll~~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~~~~ 180 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWA---TNPPDPRLKRMLIKRVATMVRDMH---AAGINHRDCYICHFLLHLPFPGREE 180 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHH---HCcCccCCCChhhEEEeccccCCCC
Confidence 23578999999876 8988886421 123345667789999999999999 889999999999999975
Q ss_pred CCceEEecccCCc
Q 002063 815 DYEPKIADFGVAK 827 (973)
Q Consensus 815 ~~~~kl~Dfgl~~ 827 (973)
++.+.++||+.+.
T Consensus 181 ~~~~~LIDl~r~~ 193 (268)
T PRK15123 181 DLKLSVIDLHRAQ 193 (268)
T ss_pred CceEEEEECCccc
Confidence 4679999999875
No 493
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.67 E-value=1.6e-09 Score=96.62 Aligned_cols=139 Identities=20% Similarity=0.255 Sum_probs=108.3
Q ss_pred CCCEEEcccCCCCCCCChhhhc---CCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchh
Q 002063 434 SLSQLVLQNNRFSGELPSELGR---LTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDL 510 (973)
Q Consensus 434 ~L~~L~L~~N~l~~~~p~~~~~---l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 510 (973)
.+..++|+++++. .+++.... ...|+..+|++|.|....+..-...+-++.|+|++|+|. .+|.++..++.|+.|
T Consensus 28 E~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 28 ELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred Hhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 4566788888776 45555444 456777799999998544444445568999999999998 678889999999999
Q ss_pred hccccccccCCCccccccCCCCeeecCCCccCCCCCchhhccc-CceEEccCCccccccCcccccCC
Q 002063 511 NLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLDFLRMG 576 (973)
Q Consensus 511 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~p~~~~~~~ 576 (973)
+++.|.|. ..|..+..+.+|.+|+..+|.+- .||..+.... ....++.+|+|.+.+|...+.+.
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~klqa~k 170 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKKKLQALK 170 (177)
T ss_pred ccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccccCcccccccC
Confidence 99999998 77888888999999999999998 7776654433 55567899999999998755443
No 494
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.60 E-value=2.6e-07 Score=93.72 Aligned_cols=133 Identities=25% Similarity=0.216 Sum_probs=92.4
Q ss_pred cccCeecccCcEEEEEEEEcCCCceEEEEEeecc------------------------ccHHHHHHHHHHHHhcCCC--c
Q 002063 679 EEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG------------------------DGVKVFAAEMEILGKIRHR--N 732 (973)
Q Consensus 679 ~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~------------------------~~~~~~~~E~~~l~~l~hp--n 732 (973)
.+..+||-|.-|.||.|...+ |.++|||.-.-. ......++|+++|.++.-. .
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~~-g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDPK-GRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred hhccccccCccceEEEEECCC-CCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 456899999999999999986 889999943210 0112357899999998644 4
Q ss_pred eeeEeEEEEeCCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeee
Q 002063 733 ILKLYACLLKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL 812 (973)
Q Consensus 733 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill 812 (973)
+-+.+++ +...+||||++|-.|...- ++....-.+...|++-+.-.- ..|+||+|+.+.||++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r----------~~~en~~~il~~il~~~~~~~---~~GiVHGDlSefNIlV 235 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR----------LDVENPDEILDKILEEVRKAY---RRGIVHGDLSEFNILV 235 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc----------CcccCHHHHHHHHHHHHHHHH---HcCccccCCchheEEE
Confidence 4455543 3457999999886664321 112222233344444444444 4689999999999999
Q ss_pred cCCCceEEecccCCccc
Q 002063 813 DEDYEPKIADFGVAKIA 829 (973)
Q Consensus 813 ~~~~~~kl~Dfgl~~~~ 829 (973)
+++|.+.+.||--+...
T Consensus 236 ~~dg~~~vIDwPQ~v~~ 252 (304)
T COG0478 236 TEDGDIVVIDWPQAVPI 252 (304)
T ss_pred ecCCCEEEEeCcccccC
Confidence 99999999999977644
No 495
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.58 E-value=1.3e-08 Score=114.95 Aligned_cols=151 Identities=23% Similarity=0.338 Sum_probs=102.6
Q ss_pred HHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcc--cc-----cccCccccccccccccc
Q 002063 783 LGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVS--DY-----SCFAGTHGYIAPELAYT 855 (973)
Q Consensus 783 ~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~--~~-----~~~~gt~~y~aPE~~~~ 855 (973)
.+++.|+.|+|. +.++||++|.|++|.++..+..|++.|+.+....++.... .+ ........|.|||++.+
T Consensus 106 ~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 445599999997 6789999999999999999999999999887554422110 01 11234567999999999
Q ss_pred CCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcC
Q 002063 856 CKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTT 934 (973)
Q Consensus 856 ~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 934 (973)
...+.++|+||+||++|.+.. |+.-+... +..+.+-......... ........+.++.+=+.+++.
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~---~~~~~~~~~~~~~~~~----------~~~~s~~~p~el~~~l~k~l~ 250 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAAN---GGLLSYSFSRNLLNAG----------AFGYSNNLPSELRESLKKLLN 250 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhcc---CCcchhhhhhcccccc----------cccccccCcHHHHHHHHHHhc
Confidence 888999999999999999984 55544322 1111121111111111 011113344556677778899
Q ss_pred CCCCCCCCHHHHHH
Q 002063 935 KLPNLRPPMREVVK 948 (973)
Q Consensus 935 ~dP~~Rpt~~evl~ 948 (973)
.++..||++.++..
T Consensus 251 ~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 251 GDSAVRPTLDLLLS 264 (700)
T ss_pred CCcccCcchhhhhc
Confidence 99999998777654
No 496
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.57 E-value=5.4e-07 Score=89.48 Aligned_cols=124 Identities=25% Similarity=0.254 Sum_probs=78.7
Q ss_pred EEEEEEEcCCCceEEEEEeecc--------------c--------------cHHHHHHHHHHHHhcCCCc--eeeEeEEE
Q 002063 691 KVYRLDLKKNAGTVAVKQLWKG--------------D--------------GVKVFAAEMEILGKIRHRN--ILKLYACL 740 (973)
Q Consensus 691 ~Vy~a~~~~~~~~vavK~~~~~--------------~--------------~~~~~~~E~~~l~~l~hpn--iv~l~~~~ 740 (973)
.||.|...+ |..+|||..... . ......+|++.|.++..-+ +-+++++
T Consensus 1 ~Vy~~~~~~-~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~- 78 (188)
T PF01163_consen 1 DVYHAIDPD-GEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY- 78 (188)
T ss_dssp EEEEEEECT-TEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE-
T ss_pred CEEEEECCC-CCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE-
Confidence 389998865 779999976430 0 0123567999999997654 4445543
Q ss_pred EeCCeeEEEEEccC--CCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhH-hhhcCCCCeEecCCCCCCeeecCCCc
Q 002063 741 LKGGSSFLVLEYMP--NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAY-LHHDCSPPIIHRDIKSSNILLDEDYE 817 (973)
Q Consensus 741 ~~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~-LH~~~~~~ivH~Dlkp~Nill~~~~~ 817 (973)
. ...+||||++ |..+..+.... +.......++.+++..+.. +| ..|++|+|+.+.||+++++ .
T Consensus 79 -~--~~~ivME~I~~~G~~~~~l~~~~-------~~~~~~~~~~~~il~~~~~~~~---~~givHGDLs~~NIlv~~~-~ 144 (188)
T PF01163_consen 79 -N--RNVIVMEYIGEDGVPLPRLKDVD-------LSPEEPKELLEEILEEIIKMLH---KAGIVHGDLSEYNILVDDG-K 144 (188)
T ss_dssp -E--TTEEEEE--EETTEEGGCHHHCG-------GGGSTHHHHHHHHHHHHHHHHH---CTTEEESS-STTSEEEETT-C
T ss_pred -e--CCEEEEEecCCCccchhhHHhcc-------ccchhHHHHHHHHHHHHHHHHH---hcCceecCCChhhEEeecc-e
Confidence 2 3479999998 65555443321 1122334566677775555 46 7899999999999999988 9
Q ss_pred eEEecccCCcccc
Q 002063 818 PKIADFGVAKIAE 830 (973)
Q Consensus 818 ~kl~Dfgl~~~~~ 830 (973)
+.+.|||.+....
T Consensus 145 ~~iIDf~qav~~~ 157 (188)
T PF01163_consen 145 VYIIDFGQAVDSS 157 (188)
T ss_dssp EEE--GTTEEETT
T ss_pred EEEEecCcceecC
Confidence 9999999887543
No 497
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.49 E-value=7.9e-09 Score=115.66 Aligned_cols=127 Identities=24% Similarity=0.291 Sum_probs=95.9
Q ss_pred cccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCCh-hhhcCCCCCEEe
Q 002063 385 KTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPS-ELGRLTNLERLI 463 (973)
Q Consensus 385 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~ 463 (973)
..|...+.++|.+. ..-..+.-++.|+.|+|++|+++... .+..++.|+.|||++|++. .+|. ...++ .|..|.
T Consensus 164 n~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc-~L~~L~ 238 (1096)
T KOG1859|consen 164 NKLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGC-KLQLLN 238 (1096)
T ss_pred hhHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhh-hheeee
Confidence 45777888888887 55566777888888888888888665 5677888999999999988 4443 23333 389999
Q ss_pred cCCCcCCCCccccccccccCCEEEccCcccccCCC-ccccCccccchhhccccccc
Q 002063 464 LTNNNFSGKIPSALGALRQLSSLHLEENALTGSIP-NEMGDCARIVDLNLARNSLS 518 (973)
Q Consensus 464 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~ 518 (973)
|++|.++. + ..+.+|++|+.|||++|-|.+.-. ..++.+..|+.|+|.+|.+-
T Consensus 239 lrnN~l~t-L-~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 239 LRNNALTT-L-RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ecccHHHh-h-hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 99999873 2 357788899999999998875422 22466788899999999885
No 498
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.45 E-value=2.2e-08 Score=99.68 Aligned_cols=236 Identities=18% Similarity=0.168 Sum_probs=142.6
Q ss_pred ccCCCCCcEEeCCCCcccCc----cCccccCCCCCcEEEecCCcccC-----------CCCCcCCCCCCCEEeccCcccC
Q 002063 93 ISALQSLTVLSLPFNVLSGK----LPLELSNCSNLKVLNVTGNAMVG-----------SVPDLSALKNLEIFDLSINYFT 157 (973)
Q Consensus 93 l~~l~~L~~L~Ls~n~l~~~----~p~~l~~l~~L~~L~L~~n~l~~-----------~~~~l~~l~~L~~L~Ls~n~l~ 157 (973)
+..+..++.++||+|.|..+ +...+.+-.+|+..+++.-.... ..+.+-++++|+..+||+|.|.
T Consensus 26 l~~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg 105 (388)
T COG5238 26 LEMMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFG 105 (388)
T ss_pred HHhhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccC
Confidence 44466677777777777533 33445556677777776543211 1123455667777777777766
Q ss_pred CccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCCh----hhh---------ccCCCCeeec
Q 002063 158 GRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPE----SIS---------ELRELGTLDI 224 (973)
Q Consensus 158 ~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~----~l~---------~l~~L~~L~L 224 (973)
...|..+ -+.+++-+.|.+|.|++|.+...-.. ++. .-+.|++...
T Consensus 106 ~~~~e~L---------------------~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vic 164 (388)
T COG5238 106 SEFPEEL---------------------GDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVIC 164 (388)
T ss_pred cccchHH---------------------HHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEe
Confidence 5444322 23455667777788877777622211 222 2367888888
Q ss_pred cccccccccchh-----hhccccccEEEeecccCCCCCC-----ccccccccccEEEeeccccccc----cCCccCCCCC
Q 002063 225 CRNKISGEFPRS-----IRKLQKLWKIELYANNLTGELP-----AELGNLTLLQEFDISSNQMYGK----LPEEIGNLKN 290 (973)
Q Consensus 225 ~~n~l~~~~p~~-----l~~l~~L~~L~L~~n~l~~~~~-----~~l~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~ 290 (973)
..|++. ..+.. +..-..|+.+.+..|.|.-..- ..+..+++|+.|||..|.++.. +...++..+.
T Consensus 165 grNRle-ngs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~ 243 (388)
T COG5238 165 GRNRLE-NGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNL 243 (388)
T ss_pred ccchhc-cCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccch
Confidence 888886 33332 2223578888888888873211 1234578899999999987633 2334555677
Q ss_pred ccEEEcccCCCCCCCCCCc----C--CccccceeeccccccCCCCCcc-------cccccccccccccccccc
Q 002063 291 LTVFQCFKNNFSGEFPSGF----G--DMRKLFAFSIYGNRFSGPFPEN-------LGRYTALTDVDISENQFS 350 (973)
Q Consensus 291 L~~L~l~~N~l~~~~p~~~----~--~l~~L~~L~l~~N~l~~~~~~~-------l~~l~~L~~L~Ls~N~l~ 350 (973)
|+.|.+.+|-++.....++ . ..++|..|...+|.+.+.+-.. -..++-|..|.+.+|+|.
T Consensus 244 lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le~ngNr~~ 316 (388)
T COG5238 244 LRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVDLERNGNRIK 316 (388)
T ss_pred hhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCceeeeechhhhhhcccHHHHHHHHccCcch
Confidence 8888888888876544332 1 2467777777777766533222 134556666666777665
No 499
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.43 E-value=3.9e-08 Score=99.24 Aligned_cols=19 Identities=32% Similarity=0.459 Sum_probs=11.2
Q ss_pred cccCccccceEeccccccc
Q 002063 380 SYADCKTIQRLRISDNHLS 398 (973)
Q Consensus 380 ~~~~l~~L~~L~Ls~N~l~ 398 (973)
.+..++.|..|.+++|.+.
T Consensus 244 ~Ln~f~~l~dlRv~~~Pl~ 262 (418)
T KOG2982|consen 244 ALNGFPQLVDLRVSENPLS 262 (418)
T ss_pred HHcCCchhheeeccCCccc
Confidence 3455566666666666654
No 500
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.39 E-value=2.4e-08 Score=100.66 Aligned_cols=61 Identities=25% Similarity=0.334 Sum_probs=32.8
Q ss_pred CCCCcEEeCCCCcccC--ccCccccCCCCCcEEEecCCcccCCCCCc-CCCCCCCEEeccCccc
Q 002063 96 LQSLTVLSLPFNVLSG--KLPLELSNCSNLKVLNVTGNAMVGSVPDL-SALKNLEIFDLSINYF 156 (973)
Q Consensus 96 l~~L~~L~Ls~n~l~~--~~p~~l~~l~~L~~L~L~~n~l~~~~~~l-~~l~~L~~L~Ls~n~l 156 (973)
.+.++.|||.+|.|+. +|-.-+.+++.|+.|+|+.|.+...+..+ ..+++|++|-|.+..+
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L 133 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGL 133 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCC
Confidence 3556666666666653 23333455566666666666665554444 2455555555555544
Done!